Prupe.1G038500_v2.0.a1

serine threonine-protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015796
Physical Location & Seq
Forward (+)
2712810 .. 2717301
4492 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G038500.3

Sequence Viewer

Length: 1176 bp
ATGAAGTCACCACGTTTGACTGCAGTGCTAAGGTTAGGAAATCTGGGCACAAAGATATCACATATTACTTGTTGCATAAGAGCCACAACGACGGCGAAAACACCGAGAAATGTGAACAAAAATGCTCACAATGTTTCAAGATATACTGTAGCAATTAAACCTTTAAAAAATAAGTGGGAGAGAGAAAAGAGGGGCGAGATGGAACCTGGTGTTCTTGATAGTATAATTAATAGGCTTCTTGAAGTTAGAGGGAGACCAGGTAAACAAGTGCAGCTCCAGGAGGCTGAGATAAGGCAACTTTGTTTTGTATCCAAGGATATTTTCTTGAGGCAGCCTAATCTTTTGGAGCTTGATGCTCCTATCAAGATTTGTGGTGATGTCCATGGTCAGTATTCAGATCTTCTGAGGCTTTTTGAGTTTGGCGGATTACCTTCTCACTCCAACTACTTGTTCTTGGGGGATTATGTTGATCGTGGGAAGCAAAGCCTTGAAACCATATGCCTTCTCCTTGCATATAAAATAAAGTATCCAGAGAATTTTTTCCTTCTGAGGGGCAACCATGAATGTGCTTCAATAAACCGAATATATGGGTTTTTTGATGAGTGTAAACGAAGATTTAATGTCAGACTCTGGAAAGTATTTACAGAATGTTTCAACTGCCTTCCTGTGGCAGCTCTCATTGATGAGAAAATTCTCTGCATGCATGGCGGACTATCTCCTGAGTTAAACAATTTAAATCAGATTAAGAGTTTACAGCGACCTACTGATGTCCCAGACAGTGGTTTGCTATGTGATCTCCTGTGGTCTGATCCTAGCAAAGACATTCAAGGTTGGGGACCAAATGAGCGGGGAGTTTCCTTTACCTTTGGTGCTGATAGGGTGACCGAGTTTCTTCGGAAGCATGATCTAGATTTAATTTGCCGAGCTCACCAGGTTGTCGAAGATGGATATGAGTTCTTTGCCAACAGACAACTTGTGACAATATTTTCAGCACCTAATTACTGTGGTGAGTTTGACAATGCTGGGGCAATGATGAGCGTGGATGAGTCTCTTATGTGCTCTTTCCAGATATTGAAACCTGCTGAAAAGAAGTCAAAGTTTGGCTTTGGGAGTAGAGCTTCAGCTAAGCCGGGTACTCCAATGAAAGTCAAGTCGTTTCTTGGTGCAGTGGCGTAA

Protein Analysis

392

Amino Acids

44.19

Weight (kDa)

8.91

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015796)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g03530
malus_domestica MD16G1217200.v1.1
prunus_persica Prupe.1G038500_v2.0.a1 Prupe.1G038500_v2.0.a1 Prupe.1G038500_v2.0.a1 Prupe.1G038500_v2.0.a1
pyrus_communis pycom16g18150
rosa_chinensis RchiOBHm_Chr4g0392801
rosa_laevigata RLG00000009787
rosa_multiflora Rmu_sc0000498.1_g000060
rosa_roxburghii Rroxscaffold_5G00337900
rosa_rugosa Rorug03G0340500 Rorug03G0340600
rosa_samantha Rh4CG047500
rosa_wichuraiana Rw4G003420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1087
AccB7I CCANNNNNTGG 1 cut(s) 779
AccBSI CCGCTC 1 cut(s) 847
AciI CCGC 3 cut(s) 423, 708, 847
AclWI GGATC 1 cut(s) 803
AcsI RAATTY 2 cut(s) 535, 690
AcuI CTGAAG 1 cut(s) 1104
AfaI GTAC 1 cut(s) 1135
AfiI CCNNNNNNNGG 3 cut(s) 550, 667, 779
AgsI TTSAA 7 cut(s) 138, 242, 491, 573, 655, 827, 1075
AjnI CCWGG 4 cut(s) 205, 256, 276, 930
AjuI GAANNNNNNNTTGG 4 cut(s) 305, 337, 434, 466
AluBI AGCT 6 cut(s) 274, 349, 674, 926, 1118, 1124
AluI AGCT 6 cut(s) 274, 349, 674, 926, 1118, 1124
Alw21I GWGCWC 2 cut(s) 928, 1061
Alw26I GTCTC 2 cut(s) 247, 1053
AlwI GGATC 1 cut(s) 803
AlwNI CAGNNNCTG 1 cut(s) 630
ApeKI GCWGC 3 cut(s) 271, 331, 671
ApoI RAATTY 2 cut(s) 535, 690
AseI ATTAAT 1 cut(s) 228
Asp700I GAANNNNTTC 1 cut(s) 539
AspS9I GGNCC 1 cut(s) 836
AsuC2I CCSGG 1 cut(s) 1131
AsuHPI GGTGA 4 cut(s) 386, 892, 920, 1019
AvaII GGWCC 1 cut(s) 836
BaeGI GKGCMC 1 cut(s) 50
BanII GRGCYC 1 cut(s) 928
Bbv12I GWGCWC 2 cut(s) 928, 1061
BbvI GCAGC 3 cut(s) 283, 343, 683
BccI CCATC 2 cut(s) 193, 938
BceAI ACGGC 1 cut(s) 108
BciT130I CCWGG 4 cut(s) 207, 258, 278, 932
BciVI GTATCC 2 cut(s) 319, 537
BcnI CCSGG 1 cut(s) 1131
BcoDI GTCTC 2 cut(s) 247, 1053
BfaI CTAG 2 cut(s) 813, 908
BfmI CTRYAG 2 cut(s) 21, 147
BfuAI ACCTGC 1 cut(s) 1087
BfuI GTATCC 2 cut(s) 319, 537
BglII AGATCT 1 cut(s) 397
BisI GCNGC 3 cut(s) 272, 332, 672
BlpI GCTNAGC 1 cut(s) 1125
BlsI GCNGC 3 cut(s) 273, 333, 673
Bme1390I CCNGG 5 cut(s) 207, 258, 278, 932, 1131
Bme18I GGWCC 1 cut(s) 836
BmgT120I GGNCC 1 cut(s) 836
BmiI GGNNCC 2 cut(s) 204, 837
BmrFI CCNGG 5 cut(s) 207, 258, 278, 932, 1131
BmsI GCATC 1 cut(s) 343
BpmI CTGGAG 1 cut(s) 260
Bpu10I CCTNAGC 1 cut(s) 29
Bpu1102I GCTNAGC 1 cut(s) 1125
BpuEI CTTGAG 1 cut(s) 346
BpuMI CCSGG 1 cut(s) 1131
BsaI GGTCTC 1 cut(s) 247
BsaJI CCNNGG 2 cut(s) 312, 382
BsaXI ACNNNNNCTCC 2 cut(s) 244, 274
Bsc4I CCNNNNNNNGG 3 cut(s) 550, 667, 779
Bse3DI GCAATG 1 cut(s) 1035
BseBI CCWGG 4 cut(s) 207, 258, 278, 932
BseDI CCNNGG 2 cut(s) 312, 382
BseGI GGATG 1 cut(s) 1048
BseLI CCNNNNNNNGG 3 cut(s) 550, 667, 779
BseMI GCAATG 1 cut(s) 1035
BseMII CTCAG 4 cut(s) 276, 395, 539, 711
BseSI GKGCMC 1 cut(s) 50
BseXI GCAGC 3 cut(s) 283, 343, 683
BseYI CCCAGC 1 cut(s) 1022
BsgI GTGCAG 1 cut(s) 290
BsiHKAI GWGCWC 2 cut(s) 928, 1061
BsiSI CCGG 1 cut(s) 1130
BslFI GGGAC 2 cut(s) 755, 849
BslI CCNNNNNNNGG 3 cut(s) 550, 667, 779
BsmAI GTCTC 2 cut(s) 247, 1053
BsmFI GGGAC 2 cut(s) 755, 849
Bso31I GGTCTC 1 cut(s) 247
Bsp1286I GDGCHC 3 cut(s) 50, 928, 1061
Bsp143I GATC 5 cut(s) 397, 469, 793, 808, 904
Bsp1720I GCTNAGC 1 cut(s) 1125
Bsp19I CCATGG 1 cut(s) 382
BspACI CCGC 3 cut(s) 423, 708, 847
BspCNI CTCAG 4 cut(s) 277, 396, 540, 712
BspLI GGNNCC 2 cut(s) 204, 837
BspMAI CTGCAG 1 cut(s) 25
BspMI ACCTGC 1 cut(s) 1087
BspPI GGATC 1 cut(s) 803
BspTNI GGTCTC 1 cut(s) 247
BsrBI CCGCTC 1 cut(s) 847
BsrDI GCAATG 1 cut(s) 1035
BssECI CCNNGG 2 cut(s) 312, 382
BssMI GATC 5 cut(s) 397, 469, 793, 808, 904
BssT1I CCWWGG 2 cut(s) 312, 382
Bst2UI CCWGG 4 cut(s) 207, 258, 278, 932
Bst4CI ACNGT 3 cut(s) 148, 779, 1004
BstC8I GCNNGC 1 cut(s) 701
BstDEI CTNAG 6 cut(s) 29, 285, 404, 548, 720, 1125
BstDSI CCRYGG 1 cut(s) 382
BstEII GGTNACC 1 cut(s) 880
BstF5I GGATG 1 cut(s) 1048
BstKTI GATC 5 cut(s) 400, 472, 796, 811, 907
BstMAI GTCTC 2 cut(s) 247, 1053
BstMBI GATC 5 cut(s) 397, 469, 793, 808, 904
BstMWI GCNNNNNNNGC 1 cut(s) 705
BstNI CCWGG 4 cut(s) 207, 258, 278, 932
BstNSI RCATGY 1 cut(s) 703
BstPI GGTNACC 1 cut(s) 880
BstSCI CCNGG 5 cut(s) 205, 256, 276, 930, 1129
BstSFI CTRYAG 2 cut(s) 21, 147
BstSLI GKGCMC 1 cut(s) 50
BstV1I GCAGC 3 cut(s) 283, 343, 683
BstX2I RGATCY 1 cut(s) 397
BstYI RGATCY 1 cut(s) 397
BsuI GTATCC 2 cut(s) 319, 537
BtgI CCRYGG 1 cut(s) 382
BtsCI GGATG 1 cut(s) 1048
BtsI GCAGTG 2 cut(s) 30, 1173
BtsIMutI CAGTG 3 cut(s) 30, 784, 1173
BveI ACCTGC 1 cut(s) 1087
Cac8I GCNNGC 1 cut(s) 701
CaiI CAGNNNCTG 1 cut(s) 630
Cfr13I GGNCC 1 cut(s) 836
CsiI ACCWGGT 3 cut(s) 205, 256, 930
Csp6I GTAC 1 cut(s) 1134
CspCI CAANNNNNGTGG 2 cut(s) 352, 387
CviAII CATG 5 cut(s) 383, 560, 700, 704, 902
CviQI GTAC 1 cut(s) 1134
DdeI CTNAG 6 cut(s) 29, 285, 404, 548, 720, 1125
DpnI GATC 5 cut(s) 399, 471, 795, 810, 906
DpnII GATC 5 cut(s) 397, 469, 793, 808, 904
DraI TTTAAA 2 cut(s) 165, 735
EciI GGCGGA 2 cut(s) 438, 723
Ecl136II GAGCTC 1 cut(s) 926
Eco130I CCWWGG 2 cut(s) 312, 382
Eco24I GRGCYC 1 cut(s) 928
Eco31I GGTCTC 1 cut(s) 247
Eco32I GATATC 1 cut(s) 57
Eco47I GGWCC 1 cut(s) 836
Eco53kI GAGCTC 1 cut(s) 926
Eco57I CTGAAG 1 cut(s) 1104
Eco91I GGTNACC 1 cut(s) 880
EcoICRI GAGCTC 1 cut(s) 926
EcoO65I GGTNACC 1 cut(s) 880
EcoRII CCWGG 4 cut(s) 205, 256, 276, 930
EcoRV GATATC 1 cut(s) 57
EcoT14I CCWWGG 2 cut(s) 312, 382
EcoT22I ATGCAT 1 cut(s) 705
EcoT38I GRGCYC 1 cut(s) 928
ErhI CCWWGG 2 cut(s) 312, 382
FaeI CATG 5 cut(s) 386, 563, 703, 707, 905
FalI AAGNNNNNCTT 2 cut(s) 1088, 1120
FaqI GGGAC 2 cut(s) 755, 849
FatI CATG 5 cut(s) 382, 559, 699, 703, 901
FauI CCCGC 1 cut(s) 840
FauNDI CATATG 1 cut(s) 497
Fnu4HI GCNGC 3 cut(s) 272, 332, 672
FokI GGATG 1 cut(s) 1055
FriOI GRGCYC 1 cut(s) 928
Fsp4HI GCNGC 3 cut(s) 272, 332, 672
FspBI CTAG 2 cut(s) 813, 908
GluI GCNGC 3 cut(s) 272, 332, 672
GsaI CCCAGC 1 cut(s) 1026
GsuI CTGGAG 1 cut(s) 260
HapII CCGG 1 cut(s) 1130
Hin1II CATG 5 cut(s) 386, 563, 703, 707, 905
HinfI GANTC 2 cut(s) 627, 1046
HpaII CCGG 1 cut(s) 1130
HphI GGTGA 4 cut(s) 386, 892, 920, 1019
Hpy166II GTNNAC 4 cut(s) 115, 263, 608, 752
Hpy188I TCNGA 7 cut(s) 397, 405, 549, 626, 741, 808, 897
Hpy8I GTNNAC 4 cut(s) 115, 263, 608, 752
Hpy99I CGWCG 1 cut(s) 94
HpyAV CCTTC 4 cut(s) 441, 512, 554, 671
HpyCH4III ACNGT 3 cut(s) 148, 779, 1004
HpyCH4IV ACGT 1 cut(s) 13
HpyCH4V TGCA 7 cut(s) 23, 75, 271, 512, 699, 703, 1166
HpyF10VI GCNNNNNNNGC 1 cut(s) 705
HpyF3I CTNAG 6 cut(s) 29, 285, 404, 548, 720, 1125
HpySE526I ACGT 1 cut(s) 13
Hsp92II CATG 5 cut(s) 386, 563, 703, 707, 905
Kzo9I GATC 5 cut(s) 397, 469, 793, 808, 904
LmnI GCTCC 3 cut(s) 279, 346, 361
Lsp1109I GCAGC 3 cut(s) 283, 343, 683
LweI GCATC 1 cut(s) 343
MabI ACCWGGT 3 cut(s) 205, 256, 930
MaeI CTAG 2 cut(s) 813, 908
MaeII ACGT 1 cut(s) 13
MaeIII GTNAC 3 cut(s) 6, 880, 976
MalI GATC 5 cut(s) 399, 471, 795, 810, 906
MbiI CCGCTC 1 cut(s) 847
MboI GATC 5 cut(s) 397, 469, 793, 808, 904
MboII GAAGA 4 cut(s) 392, 624, 884, 953
MflI RGATCY 1 cut(s) 397
MhlI GDGCHC 3 cut(s) 50, 928, 1061
MluCI AATT 7 cut(s) 153, 225, 535, 690, 730, 915, 997
MlyI GAGTC 2 cut(s) 621, 1055
MmeI TCCRAC 1 cut(s) 465
MnlI CCTC 6 cut(s) 183, 242, 274, 321, 399, 543
Mph1103I ATGCAT 1 cut(s) 705
MroXI GAANNNNTTC 1 cut(s) 539
MseI TTAA 8 cut(s) 156, 164, 228, 618, 725, 734, 744, 914
MslI CAYNNNNRTG 1 cut(s) 564
MspI CCGG 1 cut(s) 1130
MspR9I CCNGG 5 cut(s) 207, 258, 278, 932, 1131
MvaI CCWGG 4 cut(s) 207, 258, 278, 932
MwoI GCNNNNNNNGC 1 cut(s) 705
NciI CCSGG 1 cut(s) 1131
NcoI CCATGG 1 cut(s) 382
NdeI CATATG 1 cut(s) 497
NdeII GATC 5 cut(s) 397, 469, 793, 808, 904
NlaIII CATG 5 cut(s) 386, 563, 703, 707, 905
NlaIV GGNNCC 2 cut(s) 204, 837
NmeAIII GCCGAG 1 cut(s) 947
NmuCI GTSAC 3 cut(s) 6, 880, 976
NsiI ATGCAT 1 cut(s) 705
NspI RCATGY 1 cut(s) 703
PaeI GCATGC 1 cut(s) 703
PdmI GAANNNNTTC 1 cut(s) 539
PflMI CCANNNNNTGG 1 cut(s) 779
PfoI TCCNGGA 1 cut(s) 276
PkrI GCNGC 3 cut(s) 273, 333, 673
PleI GAGTC 2 cut(s) 621, 1054
PpsI GAGTC 2 cut(s) 621, 1054
PshBI ATTAAT 1 cut(s) 228
Psp124BI GAGCTC 1 cut(s) 928
Psp6I CCWGG 4 cut(s) 205, 256, 276, 930
PspEI GGTNACC 1 cut(s) 880
PspFI CCCAGC 1 cut(s) 1022
PspGI CCWGG 4 cut(s) 205, 256, 276, 930
PspN4I GGNNCC 2 cut(s) 204, 837
PspPI GGNCC 1 cut(s) 836
PstI CTGCAG 1 cut(s) 25
PstNI CAGNNNCTG 1 cut(s) 630
PsuI RGATCY 1 cut(s) 397
RsaI GTAC 1 cut(s) 1135
RsaNI GTAC 1 cut(s) 1134
RseI CAYNNNNRTG 1 cut(s) 564
SacI GAGCTC 1 cut(s) 928
SaqAI TTAA 8 cut(s) 156, 164, 228, 618, 725, 734, 744, 914
SatI GCNGC 3 cut(s) 272, 332, 672
Sau3AI GATC 5 cut(s) 397, 469, 793, 808, 904
Sau96I GGNCC 1 cut(s) 836
SchI GAGTC 2 cut(s) 621, 1055
ScrFI CCNGG 5 cut(s) 207, 258, 278, 932, 1131
SduI GDGCHC 3 cut(s) 50, 928, 1061
SexAI ACCWGGT 3 cut(s) 205, 256, 930
SfaNI GCATC 1 cut(s) 343
SfcI CTRYAG 2 cut(s) 21, 147
SinI GGWCC 1 cut(s) 836
SmiI ATTTAAAT 1 cut(s) 735
SmiMI CAYNNNNRTG 1 cut(s) 564
SmlI CTYRAG 1 cut(s) 325
SmoI CTYRAG 1 cut(s) 325
SphI GCATGC 1 cut(s) 703
Sse9I AATT 7 cut(s) 153, 225, 535, 690, 730, 915, 997
SsiI CCGC 3 cut(s) 423, 708, 847
SspI AATATT 1 cut(s) 984
SspMI CTAG 2 cut(s) 813, 908
SstI GAGCTC 1 cut(s) 928
StyD4I CCNGG 5 cut(s) 205, 256, 276, 930, 1129
StyI CCWWGG 2 cut(s) 312, 382
SwaI ATTTAAAT 1 cut(s) 735
TaaI ACNGT 3 cut(s) 148, 779, 1004
TaiI ACGT 1 cut(s) 16
TaqI TCGA 1 cut(s) 939
TaqII GACCGA 1 cut(s) 899
TasI AATT 7 cut(s) 153, 225, 535, 690, 730, 915, 997
Tru1I TTAA 8 cut(s) 156, 164, 228, 618, 725, 734, 744, 914
Tru9I TTAA 8 cut(s) 156, 164, 228, 618, 725, 734, 744, 914
TscAI CASTG 3 cut(s) 30, 784, 1173
TseFI GTSAC 3 cut(s) 6, 880, 976
TseI GCWGC 3 cut(s) 271, 331, 671
Tsp45I GTSAC 3 cut(s) 6, 880, 976
TspDTI ATGAA 3 cut(s) 17, 576, 1157
TspRI CASTG 3 cut(s) 30, 784, 1173
Van91I CCANNNNNTGG 1 cut(s) 779
VpaK11BI GGWCC 1 cut(s) 836
VspI ATTAAT 1 cut(s) 228
XapI RAATTY 2 cut(s) 535, 690
XbaI TCTAGA 1 cut(s) 907
XceI RCATGY 1 cut(s) 703
XmnI GAANNNNTTC 1 cut(s) 539
XspI CTAG 2 cut(s) 813, 908
Zsp2I ATGCAT 1 cut(s) 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.