Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013893

Physical Location & Seq

Genomic Coordinates Forward (+)

4862544 .. 4864430

Gene Structure 1887 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G068000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 423 bp

ATGGCGTCAAGCAAGAGTTTGCTATCAGCAACAGCCGCAGTTATATTAGCAACGTCTCTCTTCTGGACCTTTACTTCGTCTTCATCATCGCCTTCTTCGGCCGACTCCATCGCCTTCATCAAGAAGACCATCGATTCCAACAAGATCGCCATCTTCTCCAAGTCCTATTGCCCGTACTGTAAAAGGGCAAAATCTGTTTTTAAAGAGTTGAACCAAGTACCCTATGTAGTTGAGCTTGATGAGAGAGCTGACGGTCGAGATATCCAAGATGCTTTAGGTGAGCTTGTTGGGAGGCGTACTGTACCACAGGTGTGGGTGAAGGGAAAGTACATTGGGGGCTCAGATGATACTGTTGAAGCATATGAAAGTGGAGAACTGGCAAAGCTTCTGGGCATTGAGGTCCAGCATAGGGAGGATCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glutaredoxin

Protein Analysis

141

Amino Acids

15.3

Weight (kDa)

5.85

Isoelectric Point (pI)

37.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013893)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17280 AT5G20500
fragaria_vesca	FvH4_4g06520
malus_domestica	MD16G1241300.v1.1
prunus_persica	Prupe.1G068000_v2.0.a1
pyrus_communis	pycom16g20210
rosa_chinensis	RchiOBHm_Chr4g0398351
rosa_laevigata	RLG00000009363
rosa_multiflora	Rmu_sc0004094.1_g000041 Rmu_ssc0000240.1_g000046
rosa_roxburghii	Rroxscaffold_5G00343350
rosa_rugosa	Rorug04G0007900
rosa_samantha	Rh4AG085700 Rh4BG082700 Rh4CG093400 Rh4DG077600
rosa_wichuraiana	Rw4G007150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	36
AcoI	YGGCCR	1 cut(s)	99
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	5 cut(s)	176, 219, 298, 303, 329
AfiI	CCNNNNNNNGG	1 cut(s)	409
AgsI	TTSAA	2 cut(s)	211, 356
AleI	CACNNNNGTG	1 cut(s)	310
AluBI	AGCT	4 cut(s)	235, 248, 283, 385
AluI	AGCT	4 cut(s)	235, 248, 283, 385
Alw26I	GTCTC	1 cut(s)	60
AoxI	GGCC	1 cut(s)	99
ArsI	GACNNNNNNTTYG	2 cut(s)	58, 90
AspS9I	GGNCC	2 cut(s)	66, 400
AsuHPI	GGTGA	2 cut(s)	290, 328
AvaII	GGWCC	2 cut(s)	66, 400
BanII	GRGCYC	1 cut(s)	341
BarI	GAAGNNNNNNTAC	2 cut(s)	311, 343
BbsI	GAAGAC	2 cut(s)	72, 131
BccI	CCATC	3 cut(s)	116, 137, 158
BcoDI	GTCTC	1 cut(s)	60
BisI	GCNGC	1 cut(s)	36
BlsI	GCNGC	1 cut(s)	37
Bme18I	GGWCC	2 cut(s)	66, 400
BmgT120I	GGNCC	2 cut(s)	66, 400
BmsI	GCATC	1 cut(s)	259
BpiI	GAAGAC	2 cut(s)	72, 131
Bsa29I	ATCGAT	1 cut(s)	132
BsaBI	GATNNNNATC	1 cut(s)	149
BsaHI	GRCGYC	1 cut(s)	5
Bsc4I	CCNNNNNNNGG	1 cut(s)	409
Bse1I	ACTGG	1 cut(s)	381
Bse8I	GATNNNNATC	1 cut(s)	149
BseCI	ATCGAT	1 cut(s)	132
BseJI	GATNNNNATC	1 cut(s)	149
BseLI	CCNNNNNNNGG	1 cut(s)	409
BseMII	CTCAG	1 cut(s)	354
BseNI	ACTGG	1 cut(s)	381
BseX3I	CGGCCG	1 cut(s)	99
Bsh1285I	CGRYCG	2 cut(s)	102, 256
BshFI	GGCC	1 cut(s)	101
BshVI	ATCGAT	1 cut(s)	132
BsiEI	CGRYCG	2 cut(s)	102, 256
BslI	CCNNNNNNNGG	1 cut(s)	409
BsmAI	GTCTC	1 cut(s)	60
BsmBI	CGTCTC	1 cut(s)	60
BsnI	GGCC	1 cut(s)	101
Bsp1286I	GDGCHC	1 cut(s)	341
Bsp143I	GATC	2 cut(s)	144, 415
BspACI	CCGC	1 cut(s)	36
BspANI	GGCC	1 cut(s)	101
BspCNI	CTCAG	1 cut(s)	353
BspDI	ATCGAT	1 cut(s)	132
BsrI	ACTGG	1 cut(s)	381
BssMI	GATC	2 cut(s)	144, 415
BssNI	GRCGYC	1 cut(s)	5
Bst4CI	ACNGT	4 cut(s)	179, 254, 301, 352
Bst6I	CTCTTC	1 cut(s)	65
BstACI	GRCGYC	1 cut(s)	5
BstDEI	CTNAG	1 cut(s)	340
BstKTI	GATC	2 cut(s)	147, 418
BstMAI	GTCTC	1 cut(s)	60
BstMBI	GATC	2 cut(s)	144, 415
BstMCI	CGRYCG	2 cut(s)	102, 256
BstMWI	GCNNNNNNNGC	1 cut(s)	35
BstV2I	GAAGAC	2 cut(s)	72, 131
BstX2I	RGATCY	1 cut(s)	415
BstXI	CCANNNNNNTGG	1 cut(s)	312
BstYI	RGATCY	1 cut(s)	415
BstZI	CGGCCG	1 cut(s)	99
Bsu15I	ATCGAT	1 cut(s)	132
BsuRI	GGCC	1 cut(s)	101
BsuTUI	ATCGAT	1 cut(s)	132
BtgZI	GCGATG	2 cut(s)	72, 94
Cfr13I	GGNCC	2 cut(s)	66, 400
ClaI	ATCGAT	1 cut(s)	132
Csp6I	GTAC	5 cut(s)	175, 218, 297, 302, 328
CviJI	RGCY	7 cut(s)	35, 101, 235, 248, 283, 339, 385
CviKI_1	RGCY	7 cut(s)	35, 101, 235, 248, 283, 339, 385
CviQI	GTAC	5 cut(s)	175, 218, 297, 302, 328
DdeI	CTNAG	1 cut(s)	340
DpnI	GATC	2 cut(s)	146, 417
DpnII	GATC	2 cut(s)	144, 415
DraI	TTTAAA	1 cut(s)	202
EaeI	YGGCCR	1 cut(s)	99
EagI	CGGCCG	1 cut(s)	99
Eam1104I	CTCTTC	1 cut(s)	65
EarI	CTCTTC	1 cut(s)	65
EclXI	CGGCCG	1 cut(s)	99
Eco24I	GRGCYC	1 cut(s)	341
Eco32I	GATATC	1 cut(s)	262
Eco47I	GGWCC	2 cut(s)	66, 400
Eco52I	CGGCCG	1 cut(s)	99
EcoRV	GATATC	1 cut(s)	262
EcoT38I	GRGCYC	1 cut(s)	341
Esp3I	CGTCTC	1 cut(s)	60
FaiI	YATR	5 cut(s)	44, 225, 361, 363, 408
FauNDI	CATATG	1 cut(s)	361
Fnu4HI	GCNGC	1 cut(s)	36
FriOI	GRGCYC	1 cut(s)	341
Fsp4HI	GCNGC	1 cut(s)	36
GluI	GCNGC	1 cut(s)	36
HaeIII	GGCC	1 cut(s)	101
Hin1I	GRCGYC	1 cut(s)	5
HindIII	AAGCTT	1 cut(s)	383
HinfI	GANTC	2 cut(s)	104, 134
HphI	GGTGA	2 cut(s)	290, 328
Hpy188I	TCNGA	1 cut(s)	343
Hpy188III	TCNNGA	3 cut(s)	64, 121, 257
HpyAV	CCTTC	3 cut(s)	102, 124, 313
HpyCH4III	ACNGT	4 cut(s)	179, 254, 301, 352
HpyCH4IV	ACGT	1 cut(s)	53
HpyF10VI	GCNNNNNNNGC	1 cut(s)	35
HpyF3I	CTNAG	1 cut(s)	340
HpySE526I	ACGT	1 cut(s)	53
Hsp92I	GRCGYC	1 cut(s)	5
Kzo9I	GATC	2 cut(s)	144, 415
LpnPI	CCDG	5 cut(s)	49, 293, 362, 374, 416
LweI	GCATC	1 cut(s)	259
MaeII	ACGT	1 cut(s)	53
MalI	GATC	2 cut(s)	146, 417
MboI	GATC	2 cut(s)	144, 415
MboII	GAAGA	5 cut(s)	52, 72, 87, 136, 145
MflI	RGATCY	1 cut(s)	415
MhlI	GDGCHC	1 cut(s)	341
MlyI	GAGTC	1 cut(s)	98
MmeI	TCCRAC	1 cut(s)	162
MnlI	CCTC	3 cut(s)	285, 391, 406
MseI	TTAA	2 cut(s)	201, 421
MslI	CAYNNNNRTG	1 cut(s)	310
MwoI	GCNNNNNNNGC	1 cut(s)	35
NdeI	CATATG	1 cut(s)	361
NdeII	GATC	2 cut(s)	144, 415
OliI	CACNNNNGTG	1 cut(s)	310
PfeI	GAWTC	1 cut(s)	134
PkrI	GCNGC	1 cut(s)	37
PleI	GAGTC	1 cut(s)	98
PpsI	GAGTC	1 cut(s)	98
PspPI	GGNCC	2 cut(s)	66, 400
PsuI	RGATCY	1 cut(s)	415
RsaI	GTAC	5 cut(s)	176, 219, 298, 303, 329
RsaNI	GTAC	5 cut(s)	175, 218, 297, 302, 328
RseI	CAYNNNNRTG	1 cut(s)	310
SaqAI	TTAA	2 cut(s)	201, 421
SatI	GCNGC	1 cut(s)	36
Sau3AI	GATC	2 cut(s)	144, 415
Sau96I	GGNCC	2 cut(s)	66, 400
SchI	GAGTC	1 cut(s)	98
SduI	GDGCHC	1 cut(s)	341
SetI	ASST	9 cut(s)	56, 71, 237, 250, 280, 285, 312, 387, 402
SfaNI	GCATC	1 cut(s)	259
SinI	GGWCC	2 cut(s)	66, 400
SmiMI	CAYNNNNRTG	1 cut(s)	310
SsiI	CCGC	1 cut(s)	36
TaaI	ACNGT	4 cut(s)	179, 254, 301, 352
TaiI	ACGT	1 cut(s)	56
TaqI	TCGA	2 cut(s)	132, 256
TatI	WGTACW	1 cut(s)	327
TauI	GCSGC	1 cut(s)	38
TfiI	GAWTC	1 cut(s)	134
Tru1I	TTAA	2 cut(s)	201, 421
Tru9I	TTAA	2 cut(s)	201, 421
TspDTI	ATGAA	3 cut(s)	72, 106, 378
VpaK11BI	GGWCC	2 cut(s)	66, 400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.