Prupe.1G081600_v2.0.a1

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014920
Physical Location & Seq
Forward (+)
6007623 .. 6009720
2098 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G081600.1

Sequence Viewer

Length: 981 bp
ATGGAAGCTCGCAGTTGTATTGTTCTCTCAGCTTTGCTCATCCCTTTTCTGCTTGGAACAGCTTGTGCTCAACTTAGGACAGATTTCTACAAAGGCACATGTCCAAATGTTGAGTCCTTGGTCACCTCAGCTGTCAAAACCAAGTTCCAGCAGACCTTTGTGACTGCTCCAGCCACTCTAAGACTCTTCTTCCACGACTGCTTCGTTCGGGGTTGTGATGCTTCCGTGTTGGTTCAATCACCGACGAATCAGGCGGAGAAGGATCATCCCGATAACCTTTCGCTAGCTGGAGATGGATTTGACACGGTGATCAAAGCCAAGGCAGCGGTTGATAGTGACCCTAACTGCAGAAACAAAGTTTCATGTGCAGATATTCTTGCTCTGGCAACTAGAGATGTTGTAAACCTGGCTGGGGGACCATCTTATACAGTTGAATTGGGGAGGCGTGATGGAAGGGTATCTACTATTGCCAGTGTTCAAAGACGTCTTCCTCACCCTACTTTCAATCTCGACCAGCTTAACACCATGTTTAGCTCTCATGGTCTCACCCAAACTGACATGATCGCATTATCAGGTGCACACACACTTGGCTTCTCTCATTGCAACCGCTTCTCAAATCGAATCTACAACTTCAGCCCCGCAAAGCGTATTGATCCAACACTGAATTCAGCATACGCATTGCAGCTCAGACAGATGTGCCCCATTAACGTGGATCCAAGAATCGCCATTAACATGGACCCAACCACACCCCGGACATTTGACAATGTCTACTTCCAGAACCTTCAGCAAGGAAAGGGTCTGTTCACCTCTGATCAGATACTATTTACAGATAAAAGAGCACAGGCCACCATCAACACATTTGCATCAAGCAATGCAGCCTTTAACCGGGCTTTTGTGCAAGCCATGACCAAGTTGGGCAGAGTTGGGGTTCTGACTGGAAATCAAGGTGAAATTCGGAGTGATTGCACCCGTCCGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
peroxidase

Protein Analysis

327

Amino Acids

35.68

Weight (kDa)

8.95

Isoelectric Point (pI)

36.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014920)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18980 AT4G30170
fragaria_vesca FvH4_4g07750
malus_domestica MD13G1246700.v1.1
prunus_persica Prupe.1G081600_v2.0.a1
pyrus_communis pycom13g21780
rosa_chinensis RchiOBHm_Chr4g0400821
rosa_laevigata RLG00000009178
rosa_multiflora Rmu_sc0004591.1_g000015
rosa_roxburghii Rroxscaffold_5G00345640
rosa_rugosa Rorug04G0026100
rosa_samantha Rh4AG104000 Rh4BG099000 Rh4CG112200 Rh4DG095800
rosa_wichuraiana Rw4G008410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 487
AccI GTMKAC 1 cut(s) 768
AciI CCGC 4 cut(s) 254, 326, 607, 639
AclWI GGATC 4 cut(s) 270, 647, 707, 720
AcsI RAATTY 2 cut(s) 664, 951
AcuI CTGAAG 2 cut(s) 616, 767
AcyI GRCGYC 1 cut(s) 484
AfiI CCNNNNNNNGG 3 cut(s) 412, 750, 885
AflIII ACRYGT 1 cut(s) 98
AgsI TTSAA 4 cut(s) 236, 434, 479, 505
AjnI CCWGG 1 cut(s) 405
AjuI GAANNNNNNNTTGG 2 cut(s) 649, 681
AluBI AGCT 8 cut(s) 8, 32, 62, 131, 287, 517, 534, 685
AluI AGCT 8 cut(s) 8, 32, 62, 131, 287, 517, 534, 685
Alw21I GWGCWC 3 cut(s) 70, 580, 841
Alw26I GTCTC 1 cut(s) 548
Alw44I GTGCAC 1 cut(s) 576
AlwI GGATC 4 cut(s) 270, 647, 707, 720
AoxI GGCC 1 cut(s) 843
ApaLI GTGCAC 1 cut(s) 576
ApeKI GCWGC 3 cut(s) 323, 682, 875
ApoI RAATTY 2 cut(s) 664, 951
ArsI GACNNNNNNTTYG 2 cut(s) 98, 130
AspS9I GGNCC 2 cut(s) 416, 736
AsuC2I CCSGG 2 cut(s) 751, 887
AsuHPI GGTGA 7 cut(s) 115, 231, 319, 485, 538, 796, 959
AsuNHI GCTAGC 1 cut(s) 283
AvaII GGWCC 2 cut(s) 416, 736
BaeGI GKGCMC 2 cut(s) 580, 701
BamHI GGATCC 1 cut(s) 712
BarI GAAGNNNNNNTAC 2 cut(s) 445, 477
BbsI GAAGAC 1 cut(s) 479
Bbv12I GWGCWC 3 cut(s) 70, 580, 841
BbvCI CCTCAGC 1 cut(s) 127
BbvI GCAGC 3 cut(s) 335, 694, 887
BccI CCATC 4 cut(s) 287, 427, 443, 857
BciT130I CCWGG 1 cut(s) 407
BclI TGATCA 2 cut(s) 309, 811
BcnI CCSGG 2 cut(s) 751, 887
BcoDI GTCTC 1 cut(s) 548
BfaI CTAG 3 cut(s) 284, 390, 979
BfmI CTRYAG 1 cut(s) 346
BisI GCNGC 3 cut(s) 324, 683, 876
BlsI GCNGC 3 cut(s) 325, 684, 877
Bme1390I CCNGG 3 cut(s) 407, 751, 887
Bme18I GGWCC 2 cut(s) 416, 736
BmgT120I GGNCC 2 cut(s) 416, 736
BmiI GGNNCC 3 cut(s) 417, 714, 738
BmrFI CCNGG 3 cut(s) 407, 751, 887
BmsI GCATC 2 cut(s) 208, 872
BmtI GCTAGC 1 cut(s) 287
BpiI GAAGAC 1 cut(s) 479
BpmI CTGGAG 2 cut(s) 153, 309
Bpu10I CCTNAGC 1 cut(s) 127
BpuMI CCSGG 2 cut(s) 751, 887
BsaHI GRCGYC 1 cut(s) 484
BsaI GGTCTC 1 cut(s) 548
BsaJI CCNNGG 3 cut(s) 117, 318, 749
Bsc4I CCNNNNNNNGG 3 cut(s) 412, 750, 885
Bse1I ACTGG 2 cut(s) 471, 940
Bse3DI GCAATG 3 cut(s) 598, 677, 877
BseBI CCWGG 1 cut(s) 407
BseDI CCNNGG 3 cut(s) 117, 318, 749
BseGI GGATG 2 cut(s) 39, 265
BseLI CCNNNNNNNGG 3 cut(s) 412, 750, 885
BseMI GCAATG 3 cut(s) 598, 677, 877
BseMII CTCAG 3 cut(s) 42, 141, 700
BseNI ACTGG 2 cut(s) 471, 940
BseSI GKGCMC 2 cut(s) 580, 701
BseXI GCAGC 3 cut(s) 335, 694, 887
BseYI CCCAGC 1 cut(s) 410
BsgI GTGCAG 1 cut(s) 387
BshFI GGCC 1 cut(s) 845
BsiHKAI GWGCWC 3 cut(s) 70, 580, 841
BsiSI CCGG 2 cut(s) 751, 886
BslFI GGGAC 1 cut(s) 429
BslI CCNNNNNNNGG 3 cut(s) 412, 750, 885
BsmAI GTCTC 1 cut(s) 548
BsmFI GGGAC 1 cut(s) 429
BsnI GGCC 1 cut(s) 845
Bso31I GGTCTC 1 cut(s) 548
Bsp1286I GDGCHC 4 cut(s) 70, 580, 701, 841
Bsp143I GATC 6 cut(s) 262, 309, 561, 652, 712, 811
BspACI CCGC 4 cut(s) 254, 326, 607, 639
BspANI GGCC 1 cut(s) 845
BspCNI CTCAG 3 cut(s) 41, 140, 699
BspLI GGNNCC 3 cut(s) 417, 714, 738
BspMAI CTGCAG 1 cut(s) 350
BspOI GCTAGC 1 cut(s) 287
BspPI GGATC 4 cut(s) 270, 647, 707, 720
BspTNI GGTCTC 1 cut(s) 548
BsrDI GCAATG 3 cut(s) 598, 677, 877
BsrI ACTGG 2 cut(s) 471, 940
BssECI CCNNGG 3 cut(s) 117, 318, 749
BssMI GATC 6 cut(s) 262, 309, 561, 652, 712, 811
BssNI GRCGYC 1 cut(s) 484
BssT1I CCWWGG 2 cut(s) 117, 318
Bst2UI CCWGG 1 cut(s) 407
Bst4CI ACNGT 2 cut(s) 307, 430
Bst6I CTCTTC 1 cut(s) 191
BstACI GRCGYC 1 cut(s) 484
BstC8I GCNNGC 3 cut(s) 10, 285, 900
BstDEI CTNAG 5 cut(s) 28, 74, 127, 179, 686
BstEII GGTNACC 1 cut(s) 121
BstF5I GGATG 2 cut(s) 39, 265
BstKTI GATC 6 cut(s) 265, 312, 564, 655, 715, 814
BstMAI GTCTC 1 cut(s) 548
BstMBI GATC 6 cut(s) 262, 309, 561, 652, 712, 811
BstMWI GCNNNNNNNGC 1 cut(s) 323
BstNI CCWGG 1 cut(s) 407
BstNSI RCATGY 1 cut(s) 102
BstPI GGTNACC 1 cut(s) 121
BstSCI CCNGG 3 cut(s) 405, 749, 885
BstSFI CTRYAG 1 cut(s) 346
BstSLI GKGCMC 2 cut(s) 580, 701
BstV1I GCAGC 3 cut(s) 335, 694, 887
BstV2I GAAGAC 1 cut(s) 479
BstX2I RGATCY 1 cut(s) 712
BstXI CCANNNNNNTGG 2 cut(s) 709, 733
BstYI RGATCY 1 cut(s) 712
BsuRI GGCC 1 cut(s) 845
BtsCI GGATG 2 cut(s) 39, 265
BtsIMutI CAGTG 2 cut(s) 478, 659
Cac8I GCNNGC 3 cut(s) 10, 285, 900
Cfr13I GGNCC 2 cut(s) 416, 736
CviAII CATG 7 cut(s) 99, 363, 526, 539, 559, 733, 904
DdeI CTNAG 5 cut(s) 28, 74, 127, 179, 686
DpnI GATC 6 cut(s) 264, 311, 563, 654, 714, 813
DpnII GATC 6 cut(s) 262, 309, 561, 652, 712, 811
Eam1104I CTCTTC 1 cut(s) 191
EarI CTCTTC 1 cut(s) 191
EciI GGCGGA 1 cut(s) 269
Eco130I CCWWGG 2 cut(s) 117, 318
Eco31I GGTCTC 1 cut(s) 548
Eco47I GGWCC 2 cut(s) 416, 736
Eco57I CTGAAG 2 cut(s) 616, 767
Eco91I GGTNACC 1 cut(s) 121
EcoO65I GGTNACC 1 cut(s) 121
EcoRI GAATTC 1 cut(s) 664
EcoRII CCWGG 1 cut(s) 405
EcoT14I CCWWGG 2 cut(s) 117, 318
ErhI CCWWGG 2 cut(s) 117, 318
FaeI CATG 7 cut(s) 102, 366, 529, 542, 562, 736, 907
FaiI YATR 9 cut(s) 100, 364, 426, 527, 540, 560, 673, 734, 905
FaqI GGGAC 1 cut(s) 429
FatI CATG 7 cut(s) 98, 362, 525, 538, 558, 732, 903
FauI CCCGC 1 cut(s) 646
FbaI TGATCA 2 cut(s) 309, 811
FblI GTMKAC 1 cut(s) 768
Fnu4HI GCNGC 3 cut(s) 324, 683, 876
FokI GGATG 2 cut(s) 26, 252
Fsp4HI GCNGC 3 cut(s) 324, 683, 876
FspBI CTAG 3 cut(s) 284, 390, 979
GluI GCNGC 3 cut(s) 324, 683, 876
GsaI CCCAGC 1 cut(s) 414
GsuI CTGGAG 2 cut(s) 153, 309
HaeIII GGCC 1 cut(s) 845
HapII CCGG 2 cut(s) 751, 886
Hin1I GRCGYC 1 cut(s) 484
Hin1II CATG 7 cut(s) 102, 366, 529, 542, 562, 736, 907
HinfI GANTC 5 cut(s) 113, 183, 247, 621, 720
HpaII CCGG 2 cut(s) 751, 886
HphI GGTGA 7 cut(s) 115, 231, 319, 485, 538, 796, 959
Hpy166II GTNNAC 4 cut(s) 403, 578, 769, 804
Hpy188I TCNGA 6 cut(s) 689, 811, 816, 933, 957, 975
Hpy188III TCNNGA 3 cut(s) 269, 509, 775
Hpy8I GTNNAC 4 cut(s) 403, 578, 769, 804
Hpy99I CGWCG 1 cut(s) 247
HpyAV CCTTC 3 cut(s) 253, 447, 791
HpyCH4III ACNGT 2 cut(s) 307, 430
HpyCH4IV ACGT 2 cut(s) 484, 708
HpyCH4V TGCA 9 cut(s) 348, 368, 578, 603, 682, 863, 875, 898, 966
HpyF10VI GCNNNNNNNGC 1 cut(s) 323
HpyF3I CTNAG 5 cut(s) 28, 74, 127, 179, 686
HpySE526I ACGT 2 cut(s) 484, 708
Hsp92I GRCGYC 1 cut(s) 484
Hsp92II CATG 7 cut(s) 102, 366, 529, 542, 562, 736, 907
Ksp22I TGATCA 2 cut(s) 309, 811
Kzo9I GATC 6 cut(s) 262, 309, 561, 652, 712, 811
LmnI GCTCC 1 cut(s) 172
Lsp1109I GCAGC 3 cut(s) 335, 694, 887
LweI GCATC 2 cut(s) 208, 872
MaeI CTAG 3 cut(s) 284, 390, 979
MaeII ACGT 2 cut(s) 484, 708
MaeIII GTNAC 3 cut(s) 121, 160, 335
MalI GATC 6 cut(s) 264, 311, 563, 654, 714, 813
MboI GATC 6 cut(s) 262, 309, 561, 652, 712, 811
MboII GAAGA 3 cut(s) 178, 181, 479
MflI RGATCY 1 cut(s) 712
MhlI GDGCHC 4 cut(s) 70, 580, 701, 841
MluCI AATT 3 cut(s) 434, 664, 951
MlyI GAGTC 2 cut(s) 122, 177
MmeI TCCRAC 1 cut(s) 680
MnlI CCTC 4 cut(s) 136, 435, 501, 817
MseI TTAA 4 cut(s) 519, 705, 729, 882
MslI CAYNNNNRTG 2 cut(s) 707, 731
MspA1I CMGCKG 2 cut(s) 131, 326
MspI CCGG 2 cut(s) 751, 886
MspR9I CCNGG 3 cut(s) 407, 751, 887
MvaI CCWGG 1 cut(s) 407
MwoI GCNNNNNNNGC 1 cut(s) 323
NciI CCSGG 2 cut(s) 751, 887
NdeII GATC 6 cut(s) 262, 309, 561, 652, 712, 811
NheI GCTAGC 1 cut(s) 283
NlaIII CATG 7 cut(s) 102, 366, 529, 542, 562, 736, 907
NlaIV GGNNCC 3 cut(s) 417, 714, 738
NmuCI GTSAC 3 cut(s) 121, 160, 335
NspI RCATGY 1 cut(s) 102
PciI ACATGT 1 cut(s) 98
PcsI WCGNNNNNNNCGW 1 cut(s) 201
PfeI GAWTC 3 cut(s) 247, 621, 720
PflFI GACNNNGTC 1 cut(s) 764
PkrI GCNGC 3 cut(s) 325, 684, 877
PleI GAGTC 2 cut(s) 121, 177
PpsI GAGTC 2 cut(s) 121, 177
PscI ACATGT 1 cut(s) 98
Psp6I CCWGG 1 cut(s) 405
PspEI GGTNACC 1 cut(s) 121
PspFI CCCAGC 1 cut(s) 410
PspGI CCWGG 1 cut(s) 405
PspN4I GGNNCC 3 cut(s) 417, 714, 738
PspPI GGNCC 2 cut(s) 416, 736
PstI CTGCAG 1 cut(s) 350
PsuI RGATCY 1 cut(s) 712
PsyI GACNNNGTC 1 cut(s) 764
PvuII CAGCTG 1 cut(s) 131
RseI CAYNNNNRTG 2 cut(s) 707, 731
SaqAI TTAA 4 cut(s) 519, 705, 729, 882
SatI GCNGC 3 cut(s) 324, 683, 876
Sau3AI GATC 6 cut(s) 262, 309, 561, 652, 712, 811
Sau96I GGNCC 2 cut(s) 416, 736
SchI GAGTC 2 cut(s) 122, 177
ScrFI CCNGG 3 cut(s) 407, 751, 887
SduI GDGCHC 4 cut(s) 70, 580, 701, 841
SfaNI GCATC 2 cut(s) 208, 872
SfcI CTRYAG 1 cut(s) 346
SinI GGWCC 2 cut(s) 416, 736
SmiMI CAYNNNNRTG 2 cut(s) 707, 731
Sse9I AATT 3 cut(s) 434, 664, 951
SsiI CCGC 4 cut(s) 254, 326, 607, 639
SspMI CTAG 3 cut(s) 284, 390, 979
StyD4I CCNGG 3 cut(s) 405, 749, 885
StyI CCWWGG 2 cut(s) 117, 318
TaaI ACNGT 2 cut(s) 307, 430
TaiI ACGT 2 cut(s) 487, 711
TaqI TCGA 2 cut(s) 510, 619
TasI AATT 3 cut(s) 434, 664, 951
TfiI GAWTC 3 cut(s) 247, 621, 720
Tru1I TTAA 4 cut(s) 519, 705, 729, 882
Tru9I TTAA 4 cut(s) 519, 705, 729, 882
TscAI CASTG 2 cut(s) 478, 666
TseFI GTSAC 3 cut(s) 121, 160, 335
TseI GCWGC 3 cut(s) 323, 682, 875
Tsp45I GTSAC 3 cut(s) 121, 160, 335
TspDTI ATGAA 1 cut(s) 351
TspGWI ACGGA 1 cut(s) 214
TspRI CASTG 2 cut(s) 478, 666
Tth111I GACNNNGTC 1 cut(s) 764
VneI GTGCAC 1 cut(s) 576
VpaK11BI GGWCC 2 cut(s) 416, 736
XapI RAATTY 2 cut(s) 664, 951
XceI RCATGY 1 cut(s) 102
XcmI CCANNNNNNNNNTGG 1 cut(s) 910
XmiI GTMKAC 1 cut(s) 768
XspI CTAG 3 cut(s) 284, 390, 979
ZraI GACGTC 1 cut(s) 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.