Prupe.1G094300_v2.0.a1
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0018023
Physical Location & Seq
Reverse (-)
7310076 .. 7312422
2347 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G094300.1

Sequence Viewer

Length: 1167 bp
ATGGGATCCTCCTTGAGTGCTTGCTGTAGTTCAGAGAAGGTAGATGAGGAAAGGGCTACTCGTGAAATTGGTGGAGGTCACGCGTCATGGAGAATATTTTCGTACAAGGAATTGCAGACGGCTACCAATGGTTTTAGTGATGACAATCTGCTTGGAGAAGGAGGGTTTGGAAGTGTCTATTGGGGCAAAACCAGTGATGGTCTCCAGATTGCTGTGAAGAAGTTGAAAGCAATGAATTCAAAAGCTGAAATGGAATTTGCAGTTGAGGTTGAAGTTCTTGGAAGGGTTAGGCACAAGAATTTGTTGGGTCTTAGGGGCTATTATGCTGGGGCTGATCAGCGGCTTATAGTGTATGATTACATGCCAAATCTTAGCTTACTTTCTCATTTGCATGGCCAATTTGCAAGTGAAGTTCAGCTGGATTGGAAAAGGAGAATGAAGGTTGCTCTTGGCTCAGCTGAAGGCCTCCTGTACTTGCACCATGAGGTCACCCCACACATCATTCATAGAGACATAAAGGCAAGCAATGTGCTTTTGGATTCAGATTTCGAGCCACTAGTTGCAGATTTTGGGTTTGCCAAGCTAATCCCAGAAGGTGTAAGCCACATGACAACTCGAGTCAAGGGCACATTAGGTTACCTAGCCCCTGAATATGCCATGTGGGGAAAAGTCTCTGAGAGCTGTGATGTGTACAGCTTTGGGATTCTTCTTTTAGAGCTTGTGACTGGAAGAAAGCCCATTGAGAAGCTCCCTGGTGGAGTGAAGAGGACAATAACTGAGTGGGCTGAGCCACTCATAACCAAAGGGAAGCTCAAGGAACTTGCTGACCCAAAACTCAGAGGAAACTTTGATGAAGCCCAATTGAAGCAAGCCATCAATGTTGCTGCCCTATGTGTGAAAAGTGAGCCTGAGAAAAGGCCTAAGATGAAGGAAGTGGTTGATATTTTAAAAGGGTTTGAGGCTAAGGCCAGATTGACACCTTTGAGAATTGAAAGTGTGAGATATAAGGAGGAGCTTCTGGCACTTGACCAAGCTAGTGATGATGAGGGAGATGGAGGGGCTGATGAAAGCAATAATGGTTATGGTGTTTTTAGTGCCATAGAGGTTCAGAAAATGCAGGATCCTTACAAGGTCTATGGAGAGAGGAGAATGGCTAAATACGGGTGA

Protein Analysis

389

Amino Acids

43.08

Weight (kDa)

6.35

Isoelectric Point (pI)

33.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018023)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g08480
malus_domestica MD16G1264800.v1.1
prunus_persica Prupe.1G094300_v2.0.a1
pyrus_communis pycom16g23410
rosa_chinensis RchiOBHm_Chr4g0403901
rosa_laevigata RLG00000008943
rosa_multiflora Rmu_sc0005134.1_g000012
rosa_roxburghii Rroxscaffold_5G00348480
rosa_rugosa Rorug04G0046100
rosa_samantha Rh4BG114800
rosa_wichuraiana Rw4G009900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 83
AciI CCGC 1 cut(s) 340
AclWI GGATC 3 cut(s) 13, 1115, 1128
AcoI YGGCCR 1 cut(s) 394
AcsI RAATTY 3 cut(s) 235, 254, 298
AcuI CTGAAG 1 cut(s) 480
AfaI GTAC 3 cut(s) 104, 473, 692
AflIII ACRYGT 1 cut(s) 81
AgsI TTSAA 5 cut(s) 226, 240, 272, 865, 992
AhlI ACTAGT 1 cut(s) 556
AjnI CCWGG 1 cut(s) 751
AjuI GAANNNNNNNTTGG 4 cut(s) 150, 163, 182, 195
Alw26I GTCTC 3 cut(s) 206, 504, 676
AlwI GGATC 3 cut(s) 13, 1115, 1128
Ama87I CYCGRG 1 cut(s) 615
AoxI GGCC 4 cut(s) 394, 463, 917, 966
ApeKI GCWGC 1 cut(s) 884
ApoI RAATTY 3 cut(s) 235, 254, 298
Asp700I GAANNNNTTC 1 cut(s) 97
AsuHPI GGTGA 1 cut(s) 481
AvaI CYCGRG 1 cut(s) 615
BaeGI GKGCMC 1 cut(s) 629
BalI TGGCCA 1 cut(s) 396
BamHI GGATCC 2 cut(s) 5, 1120
BauI CACGAG 1 cut(s) 60
BbvI GCAGC 1 cut(s) 871
BccI CCATC 3 cut(s) 191, 881, 1046
BceAI ACGGC 1 cut(s) 135
BciT130I CCWGG 1 cut(s) 753
BclI TGATCA 1 cut(s) 334
BcoDI GTCTC 3 cut(s) 206, 504, 676
BcuI ACTAGT 1 cut(s) 556
BfaI CTAG 3 cut(s) 557, 641, 1035
BfmI CTRYAG 1 cut(s) 25
BisI GCNGC 2 cut(s) 341, 885
BlpI GCTNAGC 2 cut(s) 454, 786
BlsI GCNGC 2 cut(s) 342, 886
Bme1390I CCNGG 1 cut(s) 753
BmeT110I CYCGRG 1 cut(s) 615
BmiI GGNNCC 2 cut(s) 7, 1122
BmrFI CCNGG 1 cut(s) 753
BpmI CTGGAG 1 cut(s) 188
Bpu10I CCTNAGC 1 cut(s) 963
Bpu1102I GCTNAGC 2 cut(s) 454, 786
BpuEI CTTGAG 2 cut(s) 34, 797
BsaBI GATNNNNATC 1 cut(s) 144
BsaI GGTCTC 1 cut(s) 206
BsaJI CCNNGG 1 cut(s) 751
Bse1I ACTGG 2 cut(s) 192, 730
Bse3DI GCAATG 2 cut(s) 237, 532
Bse8I GATNNNNATC 1 cut(s) 144
BseBI CCWGG 1 cut(s) 753
BseDI CCNNGG 1 cut(s) 751
BseJI GATNNNNATC 1 cut(s) 144
BseMI GCAATG 2 cut(s) 237, 532
BseMII CTCAG 6 cut(s) 468, 666, 768, 777, 850, 900
BseNI ACTGG 2 cut(s) 192, 730
BseRI GAGGAG 2 cut(s) 1025, 1159
BseSI GKGCMC 1 cut(s) 629
BseXI GCAGC 1 cut(s) 871
BseYI CCCAGC 1 cut(s) 326
Bsh1236I CGCG 1 cut(s) 83
BshFI GGCC 4 cut(s) 396, 465, 919, 968
BsiHKCI CYCGRG 1 cut(s) 615
BsmAI GTCTC 3 cut(s) 206, 504, 676
BsnI GGCC 4 cut(s) 396, 465, 919, 968
Bso31I GGTCTC 1 cut(s) 206
BsoBI CYCGRG 1 cut(s) 615
Bsp1286I GDGCHC 1 cut(s) 629
Bsp1407I TGTACA 1 cut(s) 690
Bsp143I GATC 3 cut(s) 5, 334, 1120
Bsp1720I GCTNAGC 2 cut(s) 454, 786
BspACI CCGC 1 cut(s) 340
BspANI GGCC 4 cut(s) 396, 465, 919, 968
BspCNI CTCAG 6 cut(s) 467, 667, 769, 778, 849, 901
BspFNI CGCG 1 cut(s) 83
BspLI GGNNCC 2 cut(s) 7, 1122
BspPI GGATC 3 cut(s) 13, 1115, 1128
BspTNI GGTCTC 1 cut(s) 206
BsrDI GCAATG 2 cut(s) 237, 532
BsrGI TGTACA 1 cut(s) 690
BsrI ACTGG 2 cut(s) 192, 730
BssECI CCNNGG 1 cut(s) 751
BssMI GATC 3 cut(s) 5, 334, 1120
BssSI CACGAG 1 cut(s) 60
Bst2BI CACGAG 1 cut(s) 60
Bst2UI CCWGG 1 cut(s) 753
Bst6I CTCTTC 1 cut(s) 758
BstAUI TGTACA 1 cut(s) 690
BstC8I GCNNGC 3 cut(s) 22, 523, 870
BstEII GGTNACC 2 cut(s) 487, 635
BstFNI CGCG 1 cut(s) 83
BstKTI GATC 3 cut(s) 8, 337, 1123
BstMAI GTCTC 3 cut(s) 206, 504, 676
BstMBI GATC 3 cut(s) 5, 334, 1120
BstNI CCWGG 1 cut(s) 753
BstNSI RCATGY 1 cut(s) 364
BstPI GGTNACC 2 cut(s) 487, 635
BstSCI CCNGG 1 cut(s) 751
BstSFI CTRYAG 1 cut(s) 25
BstSLI GKGCMC 1 cut(s) 629
BstUI CGCG 1 cut(s) 83
BstV1I GCAGC 1 cut(s) 871
BstX2I RGATCY 2 cut(s) 5, 1120
BstYI RGATCY 2 cut(s) 5, 1120
BsuRI GGCC 4 cut(s) 396, 465, 919, 968
BtsIMutI CAGTG 1 cut(s) 199
Cac8I GCNNGC 3 cut(s) 22, 523, 870
CseI GACGC 1 cut(s) 72
Csp6I GTAC 3 cut(s) 103, 472, 691
CviAII CATG 6 cut(s) 87, 361, 392, 482, 607, 658
CviQI GTAC 3 cut(s) 103, 472, 691
DpnI GATC 3 cut(s) 7, 336, 1122
DpnII GATC 3 cut(s) 5, 334, 1120
DraI TTTAAA 1 cut(s) 948
EaeI YGGCCR 1 cut(s) 394
Eam1104I CTCTTC 1 cut(s) 758
EarI CTCTTC 1 cut(s) 758
Eco147I AGGCCT 2 cut(s) 465, 919
Eco31I GGTCTC 1 cut(s) 206
Eco57I CTGAAG 1 cut(s) 480
Eco88I CYCGRG 1 cut(s) 615
Eco91I GGTNACC 2 cut(s) 487, 635
EcoO65I GGTNACC 2 cut(s) 487, 635
EcoRI GAATTC 1 cut(s) 235
EcoRII CCWGG 1 cut(s) 751
FaeI CATG 6 cut(s) 90, 364, 395, 485, 610, 661
FatI CATG 6 cut(s) 86, 360, 391, 481, 606, 657
FbaI TGATCA 1 cut(s) 334
Fnu4HI GCNGC 2 cut(s) 341, 885
Fsp4HI GCNGC 2 cut(s) 341, 885
FspBI CTAG 3 cut(s) 557, 641, 1035
GluI GCNGC 2 cut(s) 341, 885
GsaI CCCAGC 1 cut(s) 330
GsuI CTGGAG 1 cut(s) 188
HaeIII GGCC 4 cut(s) 396, 465, 919, 968
HgaI GACGC 1 cut(s) 72
Hin1II CATG 6 cut(s) 90, 364, 395, 485, 610, 661
HinfI GANTC 3 cut(s) 539, 618, 703
HphI GGTGA 1 cut(s) 481
Hpy166II GTNNAC 1 cut(s) 691
Hpy188I TCNGA 5 cut(s) 34, 544, 676, 839, 1110
Hpy188III TCNNGA 2 cut(s) 62, 205
Hpy8I GTNNAC 1 cut(s) 691
HpyAV CCTTC 7 cut(s) 31, 152, 276, 433, 455, 587, 922
HpyCH4V TGCA 7 cut(s) 115, 260, 391, 404, 478, 563, 1117
Hsp92II CATG 6 cut(s) 90, 364, 395, 485, 610, 661
Ksp22I TGATCA 1 cut(s) 334
Kzo9I GATC 3 cut(s) 5, 334, 1120
LmnI GCTCC 2 cut(s) 753, 1012
Lsp1109I GCAGC 1 cut(s) 871
MaeI CTAG 3 cut(s) 557, 641, 1035
MaeIII GTNAC 4 cut(s) 77, 487, 635, 721
MalI GATC 3 cut(s) 7, 336, 1122
MboI GATC 3 cut(s) 5, 334, 1120
MboII GAAGA 4 cut(s) 229, 698, 741, 775
MfeI CAATTG 1 cut(s) 860
MflI RGATCY 2 cut(s) 5, 1120
MhlI GDGCHC 1 cut(s) 629
MlsI TGGCCA 1 cut(s) 396
MluCI AATT 8 cut(s) 66, 110, 235, 254, 298, 398, 860, 987
MluI ACGCGT 1 cut(s) 81
MluNI TGGCCA 1 cut(s) 396
MlyI GAGTC 1 cut(s) 627
Mox20I TGGCCA 1 cut(s) 396
MroXI GAANNNNTTC 1 cut(s) 97
MscI TGGCCA 1 cut(s) 396
MseI TTAA 1 cut(s) 947
MslI CAYNNNNRTG 1 cut(s) 390
Msp20I TGGCCA 1 cut(s) 396
MspA1I CMGCKG 3 cut(s) 340, 418, 458
MspR9I CCNGG 1 cut(s) 753
MunI CAATTG 1 cut(s) 860
MvaI CCWGG 1 cut(s) 753
MvnI CGCG 1 cut(s) 83
NdeII GATC 3 cut(s) 5, 334, 1120
NlaIII CATG 6 cut(s) 90, 364, 395, 485, 610, 661
NlaIV GGNNCC 2 cut(s) 7, 1122
NmuCI GTSAC 3 cut(s) 77, 487, 721
NspI RCATGY 1 cut(s) 364
PaeR7I CTCGAG 1 cut(s) 615
PceI AGGCCT 2 cut(s) 465, 919
PdmI GAANNNNTTC 1 cut(s) 97
PfeI GAWTC 2 cut(s) 539, 703
PkrI GCNGC 2 cut(s) 342, 886
PleI GAGTC 1 cut(s) 626
PpsI GAGTC 1 cut(s) 626
Psp6I CCWGG 1 cut(s) 751
PspEI GGTNACC 2 cut(s) 487, 635
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 1 cut(s) 751
PspN4I GGNNCC 2 cut(s) 7, 1122
PspXI VCTCGAGB 1 cut(s) 615
PsuI RGATCY 2 cut(s) 5, 1120
PvuII CAGCTG 2 cut(s) 418, 458
RsaI GTAC 3 cut(s) 104, 473, 692
RsaNI GTAC 3 cut(s) 103, 472, 691
RseI CAYNNNNRTG 1 cut(s) 390
SaqAI TTAA 1 cut(s) 947
SatI GCNGC 2 cut(s) 341, 885
Sau3AI GATC 3 cut(s) 5, 334, 1120
SchI GAGTC 1 cut(s) 627
ScrFI CCNGG 1 cut(s) 753
SduI GDGCHC 1 cut(s) 629
SfcI CTRYAG 1 cut(s) 25
Sfr274I CTCGAG 1 cut(s) 615
SlaI CTCGAG 1 cut(s) 615
SmiMI CAYNNNNRTG 1 cut(s) 390
SmlI CTYRAG 3 cut(s) 13, 615, 812
SmoI CTYRAG 3 cut(s) 13, 615, 812
SpeI ACTAGT 1 cut(s) 556
Sse9I AATT 8 cut(s) 66, 110, 235, 254, 298, 398, 860, 987
SseBI AGGCCT 2 cut(s) 465, 919
SsiI CCGC 1 cut(s) 340
SspI AATATT 1 cut(s) 96
SspMI CTAG 3 cut(s) 557, 641, 1035
StuI AGGCCT 2 cut(s) 465, 919
StyD4I CCNGG 1 cut(s) 751
TaqI TCGA 2 cut(s) 549, 616
TasI AATT 8 cut(s) 66, 110, 235, 254, 298, 398, 860, 987
TatI WGTACW 2 cut(s) 471, 690
TauI GCSGC 1 cut(s) 343
TfiI GAWTC 2 cut(s) 539, 703
Tru1I TTAA 1 cut(s) 947
Tru9I TTAA 1 cut(s) 947
TscAI CASTG 1 cut(s) 199
TseFI GTSAC 3 cut(s) 77, 487, 721
TseI GCWGC 1 cut(s) 884
Tsp45I GTSAC 3 cut(s) 77, 487, 721
TspDTI ATGAA 6 cut(s) 248, 452, 494, 867, 941, 1080
TspRI CASTG 1 cut(s) 199
XapI RAATTY 3 cut(s) 235, 254, 298
XceI RCATGY 1 cut(s) 364
XhoI CTCGAG 1 cut(s) 615
XmnI GAANNNNTTC 1 cut(s) 97
XspI CTAG 3 cut(s) 557, 641, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.