Prupe.1G095100_v2.0.a1

Preprotein translocase subunit SCY1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
7465956 .. 7474576
8621 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G095100.4

Sequence Viewer

Length: 1653 bp
ATGTTGATAACGGTCAGAGGAGCCCTTTCTTCTTCTCCGCTTTGCTTCAGCAACCCCCATAGCCACAGCTTCTCTTATCTTACTTCCAAAGCCTCTCCAAGACTGAAAAGATCAGTGTGCAAAGCCAGCTTCTCTGTTCAGAGAAAACCCAACACGAACAGCACTACATCTTGGAAGCTTGGCGTTCTCTCCAACCGCACTGAAGCCCCAGTTTTTGATCCTTTGGGCATCAATTCAGATTGCAATTCTGGTCTAAATGCTACCTGGGAAAGTTTCCTAGGCCTATTATCACAAAAGTTAGGGAGTGCCTCAAGTTCAAAGAAGGAGAAACCTACTTCAGCTAGAGGATTGGCAGCTGCAATAGAGGATAGTTCCATTGATTTTGGAGACTTCTTCAGAGGCCCATTACCAGGAAAGTTTCTCATGCTGTTGGCATATCTGGCCTTATCTCGACTTGGAATATATATACCTCTTGGTGGGGTAAATCGTGAGGCTTTTGTTGGAAATTTGGACCAGAACAGTTTATTGAGCACCTTGGATTCATTTTCTGGAGGAGGTATTGGCAGACTGGGGATATGTTCACTGGGTATTGTTCCGTTCATCAATGCTCAGATTGTCTTCCAGCTTCTTGCACAAATTTATCCCAAGTTACAGGATCTTCAGAAAAGAGAAGGTGAAGCAGGAAGAAAGAAAATTCTGCGGTATACTCAATATGCTTCAGTTGGTTTTGCCATTGTCCAGGCAATTGGCCAAGTATTCTACCTTCGCCCATATGTCAATGACTTCAGTACAGAGTGGGTTCTCTCTTCTGTTACCTTATTGACACTTGGCTCAGTATTGACGACGTACATTGGAGAACGGATCTCAGACCTAAAACTTGGAAATGGCACATCTCTTTTGATATTCACAAGTATTATATCATACTTTCCAGCATCTGTTGGTAGAACTGTAGCGCAGGCATTTCAGGATGGTAACTATGTTGGACTTGCTGCCATAACTGTCTCCTTCTTTCTGTTGGTCCTTGGAATTGTATATGTTCAGGAAGCAGAGAGGAAAATTCCACTTAACTATGCCTCAAGATACAACAGCAGCAGAAGTGGAGGGCTTCAAAGATCTGCTTACCTACCCTTTAAGGTGAATAGTTCTGGAGTTATGCCAATAATATTTTCTACGTCATCATTAGCTCTTCCTGGTACTCTAGCACGCTTCACTGGTTTAGCTGCATTGAAGAATACTGCAGTGGCTTTAAACCCAGGGGGTTCTCTCTATCTCCCCACCAACATCCTCTTAATAGCCTTCTTCAACTACTACTACACTTTCCTACAGTTGGATCCTGATGATGTGAGTGAACAGTTGAAGCGCCAAGGTGCATCAATTCCACTCGTACGACCGGGTAAAAGTACAGCTGCATTTCTGAAGACGGTTCTAAGTCGAATATCAGTTCTTGGTTCAGCCTTTCTGGCAATCCTAGCTGCTGGTCCTTCTGTGATTGAACAAGTCACACACCTGACTGCATTTCGGGGATTCGCAGGCACATCTGTTCTCATTCTTGTTGGTTGCGCAACTGACACTGCGAGAAAAGTTCAAGCAGAGATAATATCCCAAAAGTACAAGAACATAGAGTTCTATAACATCGATAAGTTTGGCCCATAA

Protein Analysis

551

Amino Acids

59.33

Weight (kDa)

9.67

Isoelectric Point (pI)

32.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1561
AccI GTMKAC 1 cut(s) 704
AciI CCGC 3 cut(s) 38, 196, 700
AclWI GGATC 5 cut(s) 212, 663, 869, 1325, 1338
AcoI YGGCCR 1 cut(s) 748
AcsI RAATTY 4 cut(s) 505, 636, 693, 1056
AcuI CTGAAG 8 cut(s) 31, 222, 321, 379, 644, 702, 769, 1436
AfaI GTAC 6 cut(s) 790, 848, 1195, 1386, 1402, 1610
AfiI CCNNNNNNNGG 3 cut(s) 410, 476, 1327
AgsI TTSAA 7 cut(s) 318, 1109, 1228, 1303, 1357, 1493, 1586
AjnI CCWGG 5 cut(s) 263, 409, 738, 1189, 1252
AjuI GAANNNNNNNTTGG 2 cut(s) 1150, 1182
Alw21I GWGCWC 1 cut(s) 533
Alw26I GTCTC 2 cut(s) 381, 1006
AlwI GGATC 5 cut(s) 212, 663, 869, 1325, 1338
AlwNI CAGNNNCTG 1 cut(s) 935
AoxI GGCC 5 cut(s) 280, 400, 441, 748, 1645
ApeKI GCWGC 7 cut(s) 353, 356, 989, 1089, 1220, 1406, 1472
ApoI RAATTY 4 cut(s) 505, 636, 693, 1056
AspA2I CCTAGG 1 cut(s) 277
AspLEI GCGC 3 cut(s) 955, 1362, 1562
AspS9I GGNCC 5 cut(s) 401, 511, 1018, 1478, 1646
AsuC2I CCSGG 1 cut(s) 1392
AsuHPI GGTGA 2 cut(s) 686, 1147
AvaII GGWCC 3 cut(s) 511, 1018, 1478
AvrII CCTAGG 1 cut(s) 277
BalI TGGCCA 1 cut(s) 750
BamHI GGATCC 1 cut(s) 1330
BanII GRGCYC 1 cut(s) 25
BarI GAAGNNNNNNTAC 2 cut(s) 747, 779
BbsI GAAGAC 2 cut(s) 610, 1424
Bbv12I GWGCWC 1 cut(s) 533
BbvI GCAGC 7 cut(s) 343, 365, 976, 1101, 1207, 1393, 1459
BccI CCATC 1 cut(s) 962
BciT130I CCWGG 5 cut(s) 265, 411, 740, 1191, 1254
BcnI CCSGG 1 cut(s) 1392
BcoDI GTCTC 2 cut(s) 381, 1006
BfaI CTAG 4 cut(s) 278, 342, 1199, 1469
BfmI CTRYAG 3 cut(s) 948, 1236, 1322
BfoI RGCGCY 1 cut(s) 1363
BglI GCCNNNNNGGC 1 cut(s) 1460
BglII AGATCT 1 cut(s) 1112
BisI GCNGC 7 cut(s) 354, 357, 990, 1090, 1221, 1407, 1473
BlnI CCTAGG 1 cut(s) 277
BlsI GCNGC 7 cut(s) 355, 358, 991, 1091, 1222, 1408, 1474
Bme1390I CCNGG 6 cut(s) 265, 411, 740, 1191, 1254, 1392
Bme18I GGWCC 3 cut(s) 511, 1018, 1478
BmgT120I GGNCC 5 cut(s) 401, 511, 1018, 1478, 1646
BmiI GGNNCC 2 cut(s) 22, 1332
BmrFI CCNGG 6 cut(s) 265, 411, 740, 1191, 1254, 1392
BmrI ACTGGG 3 cut(s) 203, 578, 593
BmsI GCATC 3 cut(s) 237, 941, 1379
BmuI ACTGGG 3 cut(s) 203, 578, 593
BpiI GAAGAC 2 cut(s) 610, 1424
BpmI CTGGAG 2 cut(s) 570, 1167
BpuEI CTTGAG 2 cut(s) 295, 1060
BpuMI CCSGG 1 cut(s) 1392
Bsa29I ATCGAT 1 cut(s) 1635
BsaJI CCNNGG 7 cut(s) 264, 277, 534, 1021, 1252, 1253, 1363
Bsc4I CCNNNNNNNGG 3 cut(s) 410, 476, 1327
Bse1I ACTGG 4 cut(s) 209, 573, 588, 1216
BseBI CCWGG 5 cut(s) 265, 411, 740, 1191, 1254
BseCI ATCGAT 1 cut(s) 1635
BseDI CCNNGG 7 cut(s) 264, 277, 534, 1021, 1252, 1253, 1363
BseGI GGATG 2 cut(s) 973, 1281
BseLI CCNNNNNNNGG 3 cut(s) 410, 476, 1327
BseMII CTCAG 3 cut(s) 623, 846, 879
BseNI ACTGG 4 cut(s) 209, 573, 588, 1216
BseRI GAGGAG 2 cut(s) 33, 567
BseXI GCAGC 7 cut(s) 343, 365, 976, 1101, 1207, 1393, 1459
Bsh1285I CGRYCG 1 cut(s) 1391
BshFI GGCC 5 cut(s) 282, 402, 443, 750, 1647
BshVI ATCGAT 1 cut(s) 1635
BsiEI CGRYCG 1 cut(s) 1391
BsiHKAI GWGCWC 1 cut(s) 533
BsiSI CCGG 1 cut(s) 1391
BsiWI CGTACG 1 cut(s) 1384
BslI CCNNNNNNNGG 3 cut(s) 410, 476, 1327
BsmAI GTCTC 2 cut(s) 381, 1006
BsnI GGCC 5 cut(s) 282, 402, 443, 750, 1647
Bsp1286I GDGCHC 2 cut(s) 25, 533
Bsp143I GATC 6 cut(s) 110, 217, 655, 861, 1112, 1330
BspACI CCGC 3 cut(s) 38, 196, 700
BspANI GGCC 5 cut(s) 282, 402, 443, 750, 1647
BspCNI CTCAG 3 cut(s) 622, 845, 878
BspDI ATCGAT 1 cut(s) 1635
BspLI GGNNCC 2 cut(s) 22, 1332
BspMAI CTGCAG 1 cut(s) 1240
BspPI GGATC 5 cut(s) 212, 663, 869, 1325, 1338
BspQI GCTCTTC 1 cut(s) 1191
BsrI ACTGG 4 cut(s) 209, 573, 588, 1216
BssECI CCNNGG 7 cut(s) 264, 277, 534, 1021, 1252, 1253, 1363
BssMI GATC 6 cut(s) 110, 217, 655, 861, 1112, 1330
BssNAI GTATAC 1 cut(s) 705
BssT1I CCWWGG 4 cut(s) 277, 534, 1021, 1363
Bst1107I GTATAC 1 cut(s) 705
Bst2UI CCWGG 5 cut(s) 265, 411, 740, 1191, 1254
Bst4CI ACNGT 7 cut(s) 13, 521, 949, 1000, 1326, 1353, 1423
Bst6I CTCTTC 2 cut(s) 811, 1191
BstC8I GCNNGC 4 cut(s) 127, 957, 1204, 1531
BstDEI CTNAG 4 cut(s) 609, 832, 865, 1427
BstF5I GGATG 2 cut(s) 973, 1281
BstH2I RGCGCY 1 cut(s) 1363
BstHHI GCGC 3 cut(s) 955, 1362, 1562
BstKTI GATC 6 cut(s) 113, 220, 658, 864, 1115, 1333
BstMAI GTCTC 2 cut(s) 381, 1006
BstMBI GATC 6 cut(s) 110, 217, 655, 861, 1112, 1330
BstMCI CGRYCG 1 cut(s) 1391
BstMWI GCNNNNNNNGC 4 cut(s) 126, 440, 1460, 1469
BstNI CCWGG 5 cut(s) 265, 411, 740, 1191, 1254
BstSCI CCNGG 6 cut(s) 263, 409, 738, 1189, 1252, 1390
BstSFI CTRYAG 3 cut(s) 948, 1236, 1322
BstV1I GCAGC 7 cut(s) 343, 365, 976, 1101, 1207, 1393, 1459
BstV2I GAAGAC 2 cut(s) 610, 1424
BstX2I RGATCY 4 cut(s) 655, 861, 1112, 1330
BstXI CCANNNNNNTGG 1 cut(s) 746
BstYI RGATCY 4 cut(s) 655, 861, 1112, 1330
BstZ17I GTATAC 1 cut(s) 705
Bsu15I ATCGAT 1 cut(s) 1635
BsuRI GGCC 5 cut(s) 282, 402, 443, 750, 1647
BsuTUI ATCGAT 1 cut(s) 1635
BtsCI GGATG 2 cut(s) 973, 1281
BtsI GCAGTG 2 cut(s) 1245, 1569
BtsIMutI CAGTG 6 cut(s) 120, 198, 581, 1209, 1245, 1569
Cac8I GCNNGC 4 cut(s) 127, 957, 1204, 1531
CaiI CAGNNNCTG 1 cut(s) 935
CfoI GCGC 3 cut(s) 955, 1362, 1562
Cfr13I GGNCC 5 cut(s) 401, 511, 1018, 1478, 1646
ClaI ATCGAT 1 cut(s) 1635
Csp6I GTAC 6 cut(s) 789, 847, 1194, 1385, 1401, 1609
CviAII CATG 1 cut(s) 424
CviQI GTAC 6 cut(s) 789, 847, 1194, 1385, 1401, 1609
DdeI CTNAG 4 cut(s) 609, 832, 865, 1427
DpnI GATC 6 cut(s) 112, 219, 657, 863, 1114, 1332
DpnII GATC 6 cut(s) 110, 217, 655, 861, 1112, 1330
DraI TTTAAA 1 cut(s) 1248
EaeI YGGCCR 1 cut(s) 748
Eam1104I CTCTTC 2 cut(s) 811, 1191
EarI CTCTTC 2 cut(s) 811, 1191
Eco130I CCWWGG 4 cut(s) 277, 534, 1021, 1363
Eco147I AGGCCT 1 cut(s) 282
Eco24I GRGCYC 1 cut(s) 25
Eco47I GGWCC 3 cut(s) 511, 1018, 1478
Eco57I CTGAAG 8 cut(s) 31, 222, 321, 379, 644, 702, 769, 1436
EcoRII CCWGG 5 cut(s) 263, 409, 738, 1189, 1252
EcoT14I CCWWGG 4 cut(s) 277, 534, 1021, 1363
EcoT38I GRGCYC 1 cut(s) 25
ErhI CCWWGG 4 cut(s) 277, 534, 1021, 1363
FaeI CATG 1 cut(s) 427
FalI AAGNNNNNCTT 2 cut(s) 1102, 1134
FatI CATG 1 cut(s) 423
FauNDI CATATG 1 cut(s) 772
FblI GTMKAC 1 cut(s) 704
Fnu4HI GCNGC 7 cut(s) 354, 357, 990, 1090, 1221, 1407, 1473
FokI GGATG 2 cut(s) 980, 1268
FriOI GRGCYC 1 cut(s) 25
Fsp4HI GCNGC 7 cut(s) 354, 357, 990, 1090, 1221, 1407, 1473
FspBI CTAG 4 cut(s) 278, 342, 1199, 1469
FspI TGCGCA 1 cut(s) 1561
GlaI GCGC 3 cut(s) 954, 1361, 1561
GluI GCNGC 7 cut(s) 354, 357, 990, 1090, 1221, 1407, 1473
GsuI CTGGAG 2 cut(s) 570, 1167
HaeII RGCGCY 1 cut(s) 1363
HaeIII GGCC 5 cut(s) 282, 402, 443, 750, 1647
HapII CCGG 1 cut(s) 1391
HhaI GCGC 3 cut(s) 955, 1362, 1562
Hin1II CATG 1 cut(s) 427
Hin6I GCGC 3 cut(s) 953, 1360, 1560
HinP1I GCGC 3 cut(s) 953, 1360, 1560
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 2 cut(s) 539, 1524
HpaII CCGG 1 cut(s) 1391
HphI GGTGA 2 cut(s) 686, 1147
Hpy166II GTNNAC 3 cut(s) 581, 705, 1349
Hpy188I TCNGA 8 cut(s) 17, 141, 238, 398, 612, 663, 868, 1416
Hpy188III TCNNGA 8 cut(s) 450, 488, 549, 965, 1040, 1077, 1146, 1334
Hpy8I GTNNAC 3 cut(s) 581, 705, 1349
Hpy99I CGWCG 1 cut(s) 847
HpyAV CCTTC 6 cut(s) 316, 665, 773, 1015, 1306, 1491
HpyCH4III ACNGT 7 cut(s) 13, 521, 949, 1000, 1326, 1353, 1423
HpyCH4IV ACGT 2 cut(s) 845, 1172
HpyCH4V TGCA 9 cut(s) 120, 243, 359, 632, 1223, 1238, 1370, 1409, 1514
HpyF10VI GCNNNNNNNGC 4 cut(s) 126, 440, 1460, 1469
HpyF3I CTNAG 4 cut(s) 609, 832, 865, 1427
HpySE526I ACGT 2 cut(s) 845, 1172
Hsp92II CATG 1 cut(s) 427
HspAI GCGC 3 cut(s) 953, 1360, 1560
Kzo9I GATC 6 cut(s) 110, 217, 655, 861, 1112, 1330
LguI GCTCTTC 1 cut(s) 1191
LmnI GCTCC 1 cut(s) 20
Lsp1109I GCAGC 7 cut(s) 343, 365, 976, 1101, 1207, 1393, 1459
LweI GCATC 3 cut(s) 237, 941, 1379
MaeI CTAG 4 cut(s) 278, 342, 1199, 1469
MaeII ACGT 2 cut(s) 845, 1172
MaeIII GTNAC 4 cut(s) 648, 811, 971, 1498
MalI GATC 6 cut(s) 112, 219, 657, 863, 1114, 1332
MboI GATC 6 cut(s) 110, 217, 655, 861, 1112, 1330
MfeI CAATTG 1 cut(s) 744
MflI RGATCY 4 cut(s) 655, 861, 1112, 1330
MhlI GDGCHC 2 cut(s) 25, 533
MlsI TGGCCA 1 cut(s) 750
MluCI AATT 9 cut(s) 232, 244, 505, 636, 693, 744, 1026, 1056, 1374
MluNI TGGCCA 1 cut(s) 750
MmeI TCCRAC 4 cut(s) 216, 481, 961, 1308
Mox20I TGGCCA 1 cut(s) 750
MscI TGGCCA 1 cut(s) 750
MseI TTAA 4 cut(s) 1065, 1131, 1247, 1289
Msp20I TGGCCA 1 cut(s) 750
MspA1I CMGCKG 2 cut(s) 356, 1406
MspI CCGG 1 cut(s) 1391
MspR9I CCNGG 6 cut(s) 265, 411, 740, 1191, 1254, 1392
MunI CAATTG 1 cut(s) 744
MvaI CCWGG 5 cut(s) 265, 411, 740, 1191, 1254
MwoI GCNNNNNNNGC 4 cut(s) 126, 440, 1460, 1469
NciI CCSGG 1 cut(s) 1392
NdeI CATATG 1 cut(s) 772
NdeII GATC 6 cut(s) 110, 217, 655, 861, 1112, 1330
NlaIII CATG 1 cut(s) 427
NlaIV GGNNCC 2 cut(s) 22, 1332
NmuCI GTSAC 1 cut(s) 1498
NsbI TGCGCA 1 cut(s) 1561
PasI CCCWGGG 1 cut(s) 1253
PceI AGGCCT 1 cut(s) 282
PciSI GCTCTTC 1 cut(s) 1191
PfeI GAWTC 2 cut(s) 539, 1524
Pfl23II CGTACG 1 cut(s) 1384
PkrI GCNGC 7 cut(s) 355, 358, 991, 1091, 1222, 1408, 1474
Psp6I CCWGG 5 cut(s) 263, 409, 738, 1189, 1252
PspGI CCWGG 5 cut(s) 263, 409, 738, 1189, 1252
PspLI CGTACG 1 cut(s) 1384
PspN4I GGNNCC 2 cut(s) 22, 1332
PspPI GGNCC 5 cut(s) 401, 511, 1018, 1478, 1646
PstI CTGCAG 1 cut(s) 1240
PstNI CAGNNNCTG 1 cut(s) 935
PsuI RGATCY 4 cut(s) 655, 861, 1112, 1330
PvuII CAGCTG 2 cut(s) 356, 1406
RsaI GTAC 6 cut(s) 790, 848, 1195, 1386, 1402, 1610
RsaNI GTAC 6 cut(s) 789, 847, 1194, 1385, 1401, 1609
SapI GCTCTTC 1 cut(s) 1191
SaqAI TTAA 4 cut(s) 1065, 1131, 1247, 1289
SatI GCNGC 7 cut(s) 354, 357, 990, 1090, 1221, 1407, 1473
Sau3AI GATC 6 cut(s) 110, 217, 655, 861, 1112, 1330
Sau96I GGNCC 5 cut(s) 401, 511, 1018, 1478, 1646
ScrFI CCNGG 6 cut(s) 265, 411, 740, 1191, 1254, 1392
SduI GDGCHC 2 cut(s) 25, 533
SfaNI GCATC 3 cut(s) 237, 941, 1379
SfcI CTRYAG 3 cut(s) 948, 1236, 1322
SinI GGWCC 3 cut(s) 511, 1018, 1478
SmlI CTYRAG 2 cut(s) 310, 1075
SmoI CTYRAG 2 cut(s) 310, 1075
Sse9I AATT 9 cut(s) 232, 244, 505, 636, 693, 744, 1026, 1056, 1374
SseBI AGGCCT 1 cut(s) 282
SsiI CCGC 3 cut(s) 38, 196, 700
SspI AATATT 1 cut(s) 1164
SspMI CTAG 4 cut(s) 278, 342, 1199, 1469
StuI AGGCCT 1 cut(s) 282
StyD4I CCNGG 6 cut(s) 263, 409, 738, 1189, 1252, 1390
StyI CCWWGG 4 cut(s) 277, 534, 1021, 1363
TaaI ACNGT 7 cut(s) 13, 521, 949, 1000, 1326, 1353, 1423
TaiI ACGT 2 cut(s) 848, 1175
TaqI TCGA 3 cut(s) 451, 1432, 1635
TasI AATT 9 cut(s) 232, 244, 505, 636, 693, 744, 1026, 1056, 1374
TatI WGTACW 3 cut(s) 788, 1400, 1608
TfiI GAWTC 2 cut(s) 539, 1524
Tru1I TTAA 4 cut(s) 1065, 1131, 1247, 1289
Tru9I TTAA 4 cut(s) 1065, 1131, 1247, 1289
TscAI CASTG 6 cut(s) 120, 205, 588, 1216, 1245, 1576
TseFI GTSAC 1 cut(s) 1498
TseI GCWGC 7 cut(s) 353, 356, 989, 1089, 1220, 1406, 1472
Tsp45I GTSAC 1 cut(s) 1498
TspDTI ATGAA 2 cut(s) 531, 589
TspGWI ACGGA 2 cut(s) 585, 874
TspRI CASTG 6 cut(s) 120, 205, 588, 1216, 1245, 1576
VpaK11BI GGWCC 3 cut(s) 511, 1018, 1478
XapI RAATTY 4 cut(s) 505, 636, 693, 1056
XmaJI CCTAGG 1 cut(s) 277
XmiI GTMKAC 1 cut(s) 704
XspI CTAG 4 cut(s) 278, 342, 1199, 1469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.