Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0010079

Physical Location & Seq

Genomic Coordinates Reverse (-)

7297355 .. 7301205

Gene Structure 3851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0047200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2985 bp

ATGGAAGAGATAAAGTCTATGAAGTCGTCACGAAGAAAAGAAGAAACTTCTAGTAATGACGAAGAAGTAGAAGAAGAAGGAGAAGAAACAGAGGAAGAAGAAGAAGTAGAAGAAGAAGGAGAAGAAACAGAGGAAGAAGAAGAAGAACAAGAAGAAGGAGAAGAAACAGAGGAAGAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGATGGCCGAGAAACAACACAAAGGTTTTATGTGCAGACAAGAAGTCTAAGGAGCAAAAAGAAACAAGAGTCTGATGACGACAAGGACGAACAGCCAACGAAAAAGAAGATCAAACGGGAAAAGTCAAACACAAAAGTGGAAAAGACAAAGAAAGGGGGAAGGAAGAACACAAAGACAACAGAAAAGGCAAAGATCCAGTGGAAGCAACAGAAATGCACTCTAAGTGCTTTCTGGAGATTGATTGACACATACAGAGACAAAATACCTAAAGGGGCTTGGGATATTTTGAGTACTACTGTATTTTGGGGGATGATCCGACCATTCTTTGAGAAGAAGCTTACAGAAACTCAGCTCCACAGGCATGAGGCAGACTTGGAGATTATCTTGCAGTACTTTGATGTTAAAAAGAACAATGGGATTGAATGGGATCTGAGAAAGAAGGTGCTTAAGGAGGAAAGGAAGGCATCTTTGATATTTGATGTTAATATGAGGAAAGAAACAGTAATAAAACCTGATCTGGAACTGAAACTCAGCAAGGAGCTCGGCAAGAAGAAGAACGCTGATCCCAAGATAATCGCGGCACTGCTTATCATGTACCTCTTCAATGCATTCTTCTTCAGCAGGACATCGACAACCTTGACATGGGACCTCATCAACGCTTGTGAAGACATAGATAACATAAACAGTTTCAATTGGGCCAAGATGGTACTAGATTTTCTGCTGGATGGCCTTCAGAGGTACCGAAAAGATCATCCAACGACTCTTTCTGGCTGCCTCATTCTCATATATTACTGGTTCTTGGAGAAGACCAAGATCAGAAACTGGATTCCAGGAATGGAGGATGAGAAACCGAGATTTGTGAGGTGGTCGATAAAGGAGCTGTTCAACCTGCAGAAGCTCCATCAGAATCCAGACTGGCCAGAGGACTTGATAAAAGAAGGGCCGTGGTTAGAACATTGCTACATCAACTTGTCGGATACGGATGAGGAGCAGGAAACACCAAGTTTCAACAACTGGGTTCCCCAAGCGAGCCAAGACCAGGAAGAGGAGACCATAAGGGTTACTGGTAACATGAAAGTTCTGCTGAAAGAAATGGATAGGGTGATTGAAGACAATGGTGAAAAACAGGAAATGGAGGAGCAAATGAAGAAACTCTTGGAAGCAAATGAAGGACTTGCAAACCATATTAGGGTGCTTTGGAAAAAGGTTACTGTTGCAGATGGGAAAATTGAGAGTATGGAGAACAAAATGACTGAGGTGATGCAGGAAAACAGATCGCACCAGAACCACATAAAAGCACTGAAGAAATTGTTGGCGAAAGCAACCAGCAGGAACCCTGAACAGAAAAGCAGTGAGCAGCAAAATAATCAACTACAGATGGTGCTGGTGTCGACCGAGAAAGATCACAGGAGGGAATCTGAGGGGAACTTTGCAGAATATGACACTCGAACACCAGTCAACGAAGAACCAAGGGCAGCAGATCCAATTAATGCATCTCCAATATCTTACAAGAGTCCAGAACGGGAAGTGTTTGAGGATACACATGTGGACACACTAAATGAGATGGAATCAGAAAAAATAGATCAACTTGTGTCAAAAATACTGGAAGCAGCTGAGACGGTTGAAATGCCTGAGGCAGGAACAGAAATGGCAGTACCATCGGTCCCCAAGGAGAAGAAAACGGTTGACATGCATTCAATCGAGAGGAATGTGAAAGAAAAAAAGAGAAAGGCAGCTGTGAAGGACAAGGACGACGACTTTGAGTATGACACACCGGAGATCCTGAAGACTTATGGAAAGAGAAGAAAGACTGCTGCACAGGAACAGCCAAAGGAGAAAAAGAAAGCACAACCGAAGCCGCCAACAAAAATTCAGAAAGGAAAACAAGTGCAGCACCCAATGCAAATAAAAGATGTGAATTGTGAGAAGTACACTTGGAAAACATTAAAGCCTGAACTAGCAAGACACTACCAGCAATTCTTTGAGATAGTGGATGACAATACATATGTCTACTGGAGAAGTGATAATGGAATACTAGGGGTAACCAGGGGAGACATGAAGATTATCGTAGAAGAGAAAGATCTGGATGTTAATGTGGTCAAGGCTTACACTGAAATGTTGCAGAAGGAACTGAAAGAAAGGAACACTCAGATTGGATTACTAAACATCGAAGCAGCGTTTTACACAGTTCAACACGAAAAGAAACTAGCGGATTTCAAAAAAGAAGGCAAGAACATTCTCAAAGACGACTTCAAAGGCCACGAGATTGAAATAGAGTTATTCCTGATCGAAGAACTGTGGAGTAAGTTCAGCTACCCCAAGGTGATTATCCCAATACACCATTACTACAGCCAGCACTACACACTGCTTGTCATCGACAATGAGAAAAAGCAGTTTGTTCACATGAACTCTATGCTGCCACCAAAGAATGAATGGACAAAAGATAACCAATATTACAACAACGCAAACTGGGTGGTTAAGCACATAAGGAGGTTCATACATGACGTGAAGGTGACAAGGACAATATTTCCAGGTGACAGCCAGGATCAAGAGAACACAAGAGAGAAGTGCAAAGGTGAGGACAGTAGAGGAGAATTGGTCACCGAGGTTGAAGAAATGACACCAAGAGAGAAAGATTGCAGAAGGTGGATCTTGGATAATCAAATCGGGGAAAATGACTATGAGCTTGTAGAAGACTTCAACTGCCCTCAGCAGAAAACCTGTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009668 GO:0009987 GO:0010027 GO:0016020 GO:0016043 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0061024 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko03060 ko04141 ko04145 ko05110 map03060 map04141 map04145 map05110

Pfam Domains

Protein Families

SecY

Protein Analysis

994

Amino Acids

117.73

Weight (kDa)

5.03

Isoelectric Point (pI)

57.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18710
fragaria_vesca	FvH4_4g08350 FvH4_4g08350 FvH4_4g08350
malus_domestica	MD13G1262000.v1.1
prunus_persica	Prupe.1G095100_v2.0.a1 Prupe.1G095100_v2.0.a1 Prupe.1G095100_v2.0.a1 Prupe.1G095100_v2.0.a1 Prupe.1G095100_v2.0.a1
pyrus_communis	pycom13g24560
rosa_chinensis	RchiOBHm_Chr4g0404181
rosa_laevigata	RLG00000008923
rosa_multiflora	Rmu_sc0001785.1_g000021
rosa_roxburghii	Rroxscaffold_5G00348680
rosa_rugosa	Rorug04G0047200
rosa_samantha	Rh4AG123600 Rh4BG116900 Rh4CG131600 Rh4DG116100
rosa_wichuraiana	Rw4G010000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1152
Acc65I	GGTACC	1 cut(s)	993
AccB1I	GGYRCC	1 cut(s)	993
AccI	GTMKAC	2 cut(s)	1646, 2265
AccII	CGCG	1 cut(s)	833
AciI	CCGC	3 cut(s)	833, 2114, 2465
AclWI	GGATC	8 cut(s)	442, 562, 690, 812, 1730, 2029, 2808, 2912
AcoI	YGGCCR	2 cut(s)	259, 1172
AcsI	RAATTY	1 cut(s)	2124
AcuI	CTGAAG	4 cut(s)	856, 971, 1577, 2060
AfaI	GTAC	7 cut(s)	547, 647, 851, 963, 995, 1911, 2186
AfiI	CCNNNNNNNGG	5 cut(s)	897, 1294, 1300, 1444, 1892
AflII	CTTAAG	1 cut(s)	701
AflIII	ACRYGT	1 cut(s)	1798
AhdI	GACNNNNNGTC	1 cut(s)	297
AjiI	CACGTC	1 cut(s)	2761
AjnI	CCWGG	5 cut(s)	1084, 1293, 2300, 2785, 2796
AjuI	GAANNNNNNNTTGG	6 cut(s)	1003, 1035, 1394, 1426, 1550, 1582
AleI	CACNNNNGTG	1 cut(s)	389
AluBI	AGCT	9 cut(s)	592, 607, 796, 1135, 1153, 1868, 1991, 2568, 2941
AluI	AGCT	9 cut(s)	592, 607, 796, 1135, 1153, 1868, 1991, 2568, 2941
Alw21I	GWGCWC	1 cut(s)	798
Alw26I	GTCTC	4 cut(s)	504, 1298, 1865, 2301
AlwI	GGATC	8 cut(s)	442, 562, 690, 812, 1730, 2029, 2808, 2912
AlwNI	CAGNNNCTG	1 cut(s)	1077
AoxI	GGCC	6 cut(s)	259, 951, 982, 1172, 1196, 2512
ApeKI	GCWGC	9 cut(s)	1026, 1612, 1730, 1865, 1988, 2069, 2146, 2429, 2671
ApoI	RAATTY	1 cut(s)	2124
ArsI	GACNNNNNNTTYG	2 cut(s)	1997, 2029
AseI	ATTAAT	1 cut(s)	1743
Asp718I	GGTACC	1 cut(s)	993
AspS9I	GGNCC	4 cut(s)	901, 951, 1196, 1918
AsuHPI	GGTGA	8 cut(s)	1369, 1385, 1525, 2590, 2779, 2801, 2843, 2848
AvaII	GGWCC	2 cut(s)	901, 1918
AxyI	CCTNAGG	1 cut(s)	1887
BaeI	ACNNNNGTAYC	2 cut(s)	1785, 1818
BalI	TGGCCA	1 cut(s)	1174
BanI	GGYRCC	1 cut(s)	993
BanII	GRGCYC	1 cut(s)	798
BauI	CACGAG	1 cut(s)	2516
BbsI	GAAGAC	5 cut(s)	927, 1067, 1371, 2048, 2955
Bbv12I	GWGCWC	1 cut(s)	798
BbvCI	CCTCAGC	1 cut(s)	2964
BbvI	GCAGC	9 cut(s)	1013, 1624, 1742, 1877, 2000, 2056, 2158, 2441, 2658
BccI	CCATC	8 cut(s)	251, 952, 974, 1164, 1469, 1627, 1813, 1921
BceAI	ACGGC	1 cut(s)	1183
BcgI	CGANNNNNNTGC	4 cut(s)	778, 812, 1896, 1930
BciT130I	CCWGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
BciVI	GTATCC	2 cut(s)	1225, 1786
BcoDI	GTCTC	4 cut(s)	504, 1298, 1865, 2301
BfaI	CTAG	5 cut(s)	51, 965, 2213, 2291, 2462
BfmI	CTRYAG	3 cut(s)	1145, 1628, 2602
BfrI	CTTAAG	1 cut(s)	701
BfuAI	ACCTGC	1 cut(s)	1152
BfuI	GTATCC	2 cut(s)	1225, 1786
BglII	AGATCT	1 cut(s)	2335
BmcAI	AGTACT	2 cut(s)	547, 647
Bme1390I	CCNGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
Bme18I	GGWCC	2 cut(s)	901, 1918
BmeRI	GACNNNNNGTC	1 cut(s)	297
BmgBI	CACGTC	1 cut(s)	2761
BmgT120I	GGNCC	4 cut(s)	901, 951, 1196, 1918
BmiI	GGNNCC	5 cut(s)	902, 995, 1275, 1589, 1920
BmrFI	CCNGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
BmrI	ACTGGG	2 cut(s)	1279, 2734
BmsI	GCATC	3 cut(s)	728, 1506, 1757
BmuI	ACTGGG	2 cut(s)	1279, 2734
BpiI	GAAGAC	5 cut(s)	927, 1067, 1371, 2048, 2955
BpmI	CTGGAG	2 cut(s)	508, 2290
Bpu10I	CCTNAGC	1 cut(s)	2964
BsaI	GGTCTC	1 cut(s)	1298
BsaJI	CCNNGG	6 cut(s)	1199, 1724, 1923, 2301, 2574, 2859
BsaWI	WCCGGW	1 cut(s)	2029
BsaXI	ACNNNNNCTCC	2 cut(s)	2838, 2868
Bsc4I	CCNNNNNNNGG	5 cut(s)	897, 1294, 1300, 1444, 1892
Bse21I	CCTNAGG	1 cut(s)	1887
Bse3DI	GCAATG	1 cut(s)	1210
BseBI	CCWGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
BseDI	CCNNGG	6 cut(s)	1199, 1724, 1923, 2301, 2574, 2859
BseGI	GGATG	8 cut(s)	262, 570, 985, 1006, 1102, 1243, 2254, 2347
BseLI	CCNNNNNNNGG	5 cut(s)	897, 1294, 1300, 1444, 1892
BseMI	GCAATG	1 cut(s)	1210
BseMII	CTCAG	9 cut(s)	617, 677, 799, 1500, 1665, 1860, 1878, 2417, 2978
BseRI	GAGGAG	9 cut(s)	254, 257, 260, 263, 266, 1256, 1316, 1406, 2859
BseXI	GCAGC	9 cut(s)	1013, 1624, 1742, 1877, 2000, 2056, 2158, 2441, 2658
BsgI	GTGCAG	3 cut(s)	308, 2055, 2165
Bsh1236I	CGCG	1 cut(s)	833
Bsh1285I	CGRYCG	1 cut(s)	1650
BshFI	GGCC	6 cut(s)	261, 953, 984, 1174, 1198, 2514
BshNI	GGYRCC	1 cut(s)	993
BsiEI	CGRYCG	1 cut(s)	1650
BsiHKAI	GWGCWC	1 cut(s)	798
BsiSI	CCGG	1 cut(s)	2030
BslFI	GGGAC	2 cut(s)	914, 1904
BslI	CCNNNNNNNGG	5 cut(s)	897, 1294, 1300, 1444, 1892
BsmAI	GTCTC	4 cut(s)	504, 1298, 1865, 2301
BsmBI	CGTCTC	1 cut(s)	1865
BsmFI	GGGAC	2 cut(s)	914, 1904
BsmI	GAATGC	2 cut(s)	863, 1948
BsnI	GGCC	6 cut(s)	261, 953, 984, 1174, 1198, 2514
Bso31I	GGTCTC	1 cut(s)	1298
Bsp1286I	GDGCHC	1 cut(s)	798
BspACI	CCGC	3 cut(s)	833, 2114, 2465
BspANI	GGCC	6 cut(s)	261, 953, 984, 1174, 1198, 2514
BspCNI	CTCAG	9 cut(s)	616, 678, 798, 1501, 1666, 1861, 1879, 2416, 2977
BspFNI	CGCG	1 cut(s)	833
BspLI	GGNNCC	5 cut(s)	902, 995, 1275, 1589, 1920
BspMAI	CTGCAG	1 cut(s)	1149
BspMI	ACCTGC	1 cut(s)	1152
BspPI	GGATC	8 cut(s)	442, 562, 690, 812, 1730, 2029, 2808, 2912
BspT107I	GGYRCC	1 cut(s)	993
BspTI	CTTAAG	1 cut(s)	701
BspTNI	GGTCTC	1 cut(s)	1298
BsrDI	GCAATG	1 cut(s)	1210
BssECI	CCNNGG	6 cut(s)	1199, 1724, 1923, 2301, 2574, 2859
BssSI	CACGAG	1 cut(s)	2516
BssT1I	CCWWGG	3 cut(s)	1724, 1923, 2574
Bst2BI	CACGAG	1 cut(s)	2516
Bst2UI	CCWGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
Bst4CI	ACNGT	9 cut(s)	553, 757, 941, 1468, 1876, 1939, 2443, 2553, 2840
Bst6I	CTCTTC	4 cut(s)	231, 860, 1293, 2322
BstAFI	CTTAAG	1 cut(s)	701
BstAPI	GCANNNNNTGC	1 cut(s)	2155
BstC8I	GCNNGC	2 cut(s)	1285, 2609
BstDSI	CCRYGG	1 cut(s)	1199
BstEII	GGTNACC	2 cut(s)	2296, 2854
BstENI	CCTNNNNNAGG	1 cut(s)	1890
BstF5I	GGATG	8 cut(s)	262, 570, 985, 1006, 1102, 1243, 2254, 2347
BstFNI	CGCG	1 cut(s)	833
BstMAI	GTCTC	4 cut(s)	504, 1298, 1865, 2301
BstMCI	CGRYCG	1 cut(s)	1650
BstMWI	GCNNNNNNNGC	2 cut(s)	613, 2155
BstNI	CCWGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
BstNSI	RCATGY	2 cut(s)	1802, 1948
BstPI	GGTNACC	2 cut(s)	2296, 2854
BstSCI	CCNGG	5 cut(s)	1084, 1293, 2300, 2785, 2796
BstSFI	CTRYAG	3 cut(s)	1145, 1628, 2602
BstUI	CGCG	1 cut(s)	833
BstV1I	GCAGC	9 cut(s)	1013, 1624, 1742, 1877, 2000, 2056, 2158, 2441, 2658
BstV2I	GAAGAC	5 cut(s)	927, 1067, 1371, 2048, 2955
BstX2I	RGATCY	6 cut(s)	447, 682, 1735, 2034, 2335, 2904
BstYI	RGATCY	6 cut(s)	447, 682, 1735, 2034, 2335, 2904
Bsu36I	CCTNAGG	1 cut(s)	1887
BsuI	GTATCC	2 cut(s)	1225, 1786
BsuRI	GGCC	6 cut(s)	261, 953, 984, 1174, 1198, 2514
BtgI	CCRYGG	1 cut(s)	1199
BtrI	CACGTC	1 cut(s)	2761
BtsCI	GGATG	8 cut(s)	262, 570, 985, 1006, 1102, 1243, 2254, 2347
BtsI	GCAGTG	3 cut(s)	836, 1612, 2618
BtsIMutI	CAGTG	6 cut(s)	458, 836, 1553, 1612, 2364, 2618
BveI	ACCTGC	1 cut(s)	1152
Cac8I	GCNNGC	2 cut(s)	1285, 2609
CaiI	CAGNNNCTG	1 cut(s)	1077
Cfr13I	GGNCC	4 cut(s)	901, 951, 1196, 1918
Csp6I	GTAC	7 cut(s)	546, 646, 850, 962, 994, 1910, 2185
CspCI	CAANNNNNGTGG	2 cut(s)	2709, 2744
CviAII	CATG	9 cut(s)	617, 847, 897, 1327, 1799, 1945, 2311, 2659, 2756
CviQI	GTAC	7 cut(s)	546, 646, 850, 962, 994, 1910, 2185
DriI	GACNNNNNGTC	1 cut(s)	297
EaeI	YGGCCR	2 cut(s)	259, 1172
Eam1104I	CTCTTC	4 cut(s)	231, 860, 1293, 2322
Eam1105I	GACNNNNNGTC	1 cut(s)	297
EarI	CTCTTC	4 cut(s)	231, 860, 1293, 2322
Ecl136II	GAGCTC	1 cut(s)	796
Eco130I	CCWWGG	3 cut(s)	1724, 1923, 2574
Eco24I	GRGCYC	1 cut(s)	798
Eco31I	GGTCTC	1 cut(s)	1298
Eco47I	GGWCC	2 cut(s)	901, 1918
Eco53kI	GAGCTC	1 cut(s)	796
Eco57I	CTGAAG	4 cut(s)	856, 971, 1577, 2060
Eco81I	CCTNAGG	1 cut(s)	1887
Eco91I	GGTNACC	2 cut(s)	2296, 2854
EcoICRI	GAGCTC	1 cut(s)	796
EcoNI	CCTNNNNNAGG	1 cut(s)	1890
EcoO109I	RGGNCCY	1 cut(s)	901
EcoO65I	GGTNACC	2 cut(s)	2296, 2854
EcoRII	CCWGG	5 cut(s)	1084, 1293, 2300, 2785, 2796
EcoT14I	CCWWGG	3 cut(s)	1724, 1923, 2574
EcoT22I	ATGCAT	3 cut(s)	865, 1750, 1950
EcoT38I	GRGCYC	1 cut(s)	798
ErhI	CCWWGG	3 cut(s)	1724, 1923, 2574
Esp3I	CGTCTC	1 cut(s)	1865
FaeI	CATG	9 cut(s)	620, 850, 900, 1330, 1802, 1948, 2314, 2662, 2759
FalI	AAGNNNNNCTT	2 cut(s)	1394, 1426
FaqI	GGGAC	2 cut(s)	914, 1904
FatI	CATG	9 cut(s)	616, 846, 896, 1326, 1798, 1944, 2310, 2658, 2755
FauNDI	CATATG	1 cut(s)	2260
FblI	GTMKAC	2 cut(s)	1646, 2265
FokI	GGATG	8 cut(s)	269, 577, 992, 993, 1109, 1250, 2261, 2354
FriOI	GRGCYC	1 cut(s)	798
FspBI	CTAG	5 cut(s)	51, 965, 2213, 2291, 2462
GsuI	CTGGAG	2 cut(s)	508, 2290
HaeIII	GGCC	6 cut(s)	261, 953, 984, 1174, 1198, 2514
HapII	CCGG	1 cut(s)	2030
Hin1II	CATG	9 cut(s)	620, 850, 900, 1330, 1802, 1948, 2314, 2662, 2759
HincII	GTYRAC	3 cut(s)	1647, 1714, 1942
HindII	GTYRAC	3 cut(s)	1647, 1714, 1942
HindIII	AAGCTT	1 cut(s)	590
HinfI	GANTC	7 cut(s)	323, 1015, 1081, 1162, 1670, 1768, 1823
HpaII	CCGG	1 cut(s)	2030
HphI	GGTGA	8 cut(s)	1369, 1385, 1525, 2590, 2779, 2801, 2843, 2848
Hpy166II	GTNNAC	7 cut(s)	1647, 1714, 1804, 1942, 2187, 2266, 2656
Hpy8I	GTNNAC	7 cut(s)	1647, 1714, 1804, 1942, 2187, 2266, 2656
Hpy99I	CGWCG	1 cut(s)	2012
HpyCH4III	ACNGT	9 cut(s)	553, 757, 941, 1468, 1876, 1939, 2443, 2553, 2840
HpyCH4IV	ACGT	1 cut(s)	2760
HpyF10VI	GCNNNNNNNGC	2 cut(s)	613, 2155
HpySE526I	ACGT	1 cut(s)	2760
Hsp92II	CATG	9 cut(s)	620, 850, 900, 1330, 1802, 1948, 2314, 2662, 2759
KpnI	GGTACC	1 cut(s)	997
LmnI	GCTCC	7 cut(s)	306, 612, 793, 1132, 1158, 1243, 1393
Lsp1109I	GCAGC	9 cut(s)	1013, 1624, 1742, 1877, 2000, 2056, 2158, 2441, 2658
LweI	GCATC	3 cut(s)	728, 1506, 1757
MaeI	CTAG	5 cut(s)	51, 965, 2213, 2291, 2462
MaeII	ACGT	1 cut(s)	2760
MaeIII	GTNAC	8 cut(s)	27, 1315, 1322, 1462, 2296, 2767, 2789, 2854
MfeI	CAATTG	1 cut(s)	946
MflI	RGATCY	6 cut(s)	447, 682, 1735, 2034, 2335, 2904
MhlI	GDGCHC	1 cut(s)	798
MlsI	TGGCCA	1 cut(s)	1174
MluCI	AATT	8 cut(s)	946, 1482, 1562, 1740, 2124, 2173, 2231, 2849
MluNI	TGGCCA	1 cut(s)	1174
MlyI	GAGTC	3 cut(s)	332, 1009, 1777
MmeI	TCCRAC	3 cut(s)	595, 1034, 1209
Mox20I	TGGCCA	1 cut(s)	1174
Mph1103I	ATGCAT	3 cut(s)	865, 1750, 1950
MscI	TGGCCA	1 cut(s)	1174
MseI	TTAA	7 cut(s)	657, 702, 738, 1743, 2201, 2346, 2733
MslI	CAYNNNNRTG	3 cut(s)	389, 615, 2369
Msp20I	TGGCCA	1 cut(s)	1174
MspA1I	CMGCKG	2 cut(s)	1868, 1991
MspCI	CTTAAG	1 cut(s)	701
MspI	CCGG	1 cut(s)	2030
MspR9I	CCNGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
MunI	CAATTG	1 cut(s)	946
Mva1269I	GAATGC	2 cut(s)	863, 1948
MvaI	CCWGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
MvnI	CGCG	1 cut(s)	833
MwoI	GCNNNNNNNGC	2 cut(s)	613, 2155
NdeI	CATATG	1 cut(s)	2260
NlaIII	CATG	9 cut(s)	620, 850, 900, 1330, 1802, 1948, 2314, 2662, 2759
NlaIV	GGNNCC	5 cut(s)	902, 995, 1275, 1589, 1920
NmeAIII	GCCGAG	2 cut(s)	287, 777
NmuCI	GTSAC	4 cut(s)	27, 2767, 2789, 2854
NsiI	ATGCAT	3 cut(s)	865, 1750, 1950
NspI	RCATGY	2 cut(s)	1802, 1948
OliI	CACNNNNGTG	1 cut(s)	389
PciI	ACATGT	1 cut(s)	1798
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PctI	GAATGC	2 cut(s)	863, 1948
PfeI	GAWTC	4 cut(s)	1081, 1162, 1670, 1823
PfoI	TCCNGGA	1 cut(s)	1084
PleI	GAGTC	3 cut(s)	331, 1009, 1776
PpsI	GAGTC	3 cut(s)	331, 1009, 1776
PpuMI	RGGWCCY	1 cut(s)	901
PscI	ACATGT	1 cut(s)	1798
PshBI	ATTAAT	1 cut(s)	1743
Psp124BI	GAGCTC	1 cut(s)	798
Psp5II	RGGWCCY	1 cut(s)	901
Psp6I	CCWGG	5 cut(s)	1084, 1293, 2300, 2785, 2796
PspEI	GGTNACC	2 cut(s)	2296, 2854
PspGI	CCWGG	5 cut(s)	1084, 1293, 2300, 2785, 2796
PspN4I	GGNNCC	5 cut(s)	902, 995, 1275, 1589, 1920
PspPI	GGNCC	4 cut(s)	901, 951, 1196, 1918
PspPPI	RGGWCCY	1 cut(s)	901
PstI	CTGCAG	1 cut(s)	1149
PstNI	CAGNNNCTG	1 cut(s)	1077
PsuI	RGATCY	6 cut(s)	447, 682, 1735, 2034, 2335, 2904
PvuII	CAGCTG	2 cut(s)	1868, 1991
RsaI	GTAC	7 cut(s)	547, 647, 851, 963, 995, 1911, 2186
RsaNI	GTAC	7 cut(s)	546, 646, 850, 962, 994, 1910, 2185
RseI	CAYNNNNRTG	3 cut(s)	389, 615, 2369
SacI	GAGCTC	1 cut(s)	798
SalI	GTCGAC	1 cut(s)	1645
SaqAI	TTAA	7 cut(s)	657, 702, 738, 1743, 2201, 2346, 2733
Sau96I	GGNCC	4 cut(s)	901, 951, 1196, 1918
ScaI	AGTACT	2 cut(s)	547, 647
SchI	GAGTC	3 cut(s)	332, 1009, 1777
ScrFI	CCNGG	5 cut(s)	1086, 1295, 2302, 2787, 2798
SduI	GDGCHC	1 cut(s)	798
SfaNI	GCATC	3 cut(s)	728, 1506, 1757
SfcI	CTRYAG	3 cut(s)	1145, 1628, 2602
SinI	GGWCC	2 cut(s)	901, 1918
SmiMI	CAYNNNNRTG	3 cut(s)	389, 615, 2369
SmlI	CTYRAG	1 cut(s)	701
SmoI	CTYRAG	1 cut(s)	701
Sse9I	AATT	8 cut(s)	946, 1482, 1562, 1740, 2124, 2173, 2231, 2849
SsiI	CCGC	3 cut(s)	833, 2114, 2465
SspI	AATATT	2 cut(s)	2708, 2781
SspMI	CTAG	5 cut(s)	51, 965, 2213, 2291, 2462
SstI	GAGCTC	1 cut(s)	798
StyD4I	CCNGG	5 cut(s)	1084, 1293, 2300, 2785, 2796
StyI	CCWWGG	3 cut(s)	1724, 1923, 2574
TaaI	ACNGT	9 cut(s)	553, 757, 941, 1468, 1876, 1939, 2443, 2553, 2840
TaiI	ACGT	1 cut(s)	2763
TaqI	TCGA	8 cut(s)	884, 1124, 1646, 1702, 1956, 2424, 2544, 2631
TaqII	GACCGA	2 cut(s)	1664, 1906
TasI	AATT	8 cut(s)	946, 1482, 1562, 1740, 2124, 2173, 2231, 2849
TatI	WGTACW	3 cut(s)	545, 645, 2184
TauI	GCSGC	2 cut(s)	836, 2116
TfiI	GAWTC	4 cut(s)	1081, 1162, 1670, 1823
Tru1I	TTAA	7 cut(s)	657, 702, 738, 1743, 2201, 2346, 2733
Tru9I	TTAA	7 cut(s)	657, 702, 738, 1743, 2201, 2346, 2733
TscAI	CASTG	6 cut(s)	458, 843, 1560, 1612, 2371, 2625
TseFI	GTSAC	4 cut(s)	27, 2767, 2789, 2854
TseI	GCWGC	9 cut(s)	1026, 1612, 1730, 1865, 1988, 2069, 2146, 2429, 2671
Tsp45I	GTSAC	4 cut(s)	27, 2767, 2789, 2854
TspDTI	ATGAA	8 cut(s)	35, 1343, 1415, 1437, 2327, 2675, 2700, 2740
TspGWI	ACGGA	1 cut(s)	1250
TspRI	CASTG	6 cut(s)	458, 843, 1560, 1612, 2371, 2625
Vha464I	CTTAAG	1 cut(s)	701
VpaK11BI	GGWCC	2 cut(s)	901, 1918
VspI	ATTAAT	1 cut(s)	1743
XagI	CCTNNNNNAGG	1 cut(s)	1890
XapI	RAATTY	1 cut(s)	2124
XceI	RCATGY	2 cut(s)	1802, 1948
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2685
XmiI	GTMKAC	2 cut(s)	1646, 2265
XspI	CTAG	5 cut(s)	51, 965, 2213, 2291, 2462
ZrmI	AGTACT	2 cut(s)	547, 647
Zsp2I	ATGCAT	3 cut(s)	865, 1750, 1950

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.