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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06150 AT5G19060 |
| fragaria_vesca | FvH4_4g14471 FvH4_4g14471 |
| malus_domestica | MD13G1183000.v1.1 MD16G1183600.v1.1 |
| prunus_persica | Prupe.1G151300_v2.0.a1 Prupe.1G151300_v2.0.a1 |
| pyrus_communis | pycom13g15800 pycom16g15440 |
| rosa_chinensis | RchiOBHm_Chr4g0418361 |
| rosa_laevigata | RLG00000007872 |
| rosa_multiflora | Rmu_co8497655.1_g000001 Rmu_sc0009909.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00361540 |
| rosa_rugosa | Rorug04G0152400 Rorug04G0152500 |
| rosa_samantha | Rh4AG214100 Rh4BG216300 Rh4CG225700 Rh4DG212500 |
| rosa_wichuraiana | Rw4G018180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1872 |
| Acc36I | ACCTGC | 2 cut(s) | 1243, 1872 |
| Acc65I | GGTACC | 1 cut(s) | 1002 |
| AccB1I | GGYRCC | 3 cut(s) | 1002, 1008, 1803 |
| AccI | GTMKAC | 1 cut(s) | 1818 |
| AccII | CGCG | 1 cut(s) | 346 |
| AccIII | TCCGGA | 1 cut(s) | 751 |
| AciI | CCGC | 5 cut(s) | 178, 266, 885, 1092, 1593 |
| AclWI | GGATC | 6 cut(s) | 573, 730, 1227, 1672, 1685, 1839 |
| AcoI | YGGCCR | 1 cut(s) | 1759 |
| AcsI | RAATTY | 7 cut(s) | 370, 599, 744, 1021, 1261, 1354, 1381 |
| AdeI | CACNNNGTG | 2 cut(s) | 620, 1856 |
| AfaI | GTAC | 3 cut(s) | 1004, 1576, 1752 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 11, 59, 265, 1719, 1828 |
| AgeI | ACCGGT | 4 cut(s) | 828, 1005, 1149, 1734 |
| AjnI | CCWGG | 1 cut(s) | 499 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 922, 954, 1267, 1299 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1539, 1571 |
| Alw21I | GWGCWC | 3 cut(s) | 616, 1609, 1852 |
| Alw26I | GTCTC | 2 cut(s) | 656, 739 |
| Alw44I | GTGCAC | 1 cut(s) | 1848 |
| AlwI | GGATC | 6 cut(s) | 573, 730, 1227, 1672, 1685, 1839 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1424 |
| Aor13HI | TCCGGA | 1 cut(s) | 751 |
| AoxI | GGCC | 4 cut(s) | 23, 695, 1223, 1759 |
| ApaLI | GTGCAC | 1 cut(s) | 1848 |
| ApeKI | GCWGC | 3 cut(s) | 639, 1127, 1502 |
| ApoI | RAATTY | 7 cut(s) | 370, 599, 744, 1021, 1261, 1354, 1381 |
| AseI | ATTAAT | 1 cut(s) | 1485 |
| AsiGI | ACCGGT | 4 cut(s) | 828, 1005, 1149, 1734 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1397 |
| Asp718I | GGTACC | 1 cut(s) | 1002 |
| AspS9I | GGNCC | 3 cut(s) | 24, 62, 174 |
| AsuHPI | GGTGA | 3 cut(s) | 599, 813, 1181 |
| AsuII | TTCGAA | 2 cut(s) | 853, 1297 |
| AvaII | GGWCC | 2 cut(s) | 62, 174 |
| BaeGI | GKGCMC | 2 cut(s) | 1806, 1852 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1413, 1446 |
| BamHI | GGATCC | 1 cut(s) | 1677 |
| BanI | GGYRCC | 3 cut(s) | 1002, 1008, 1803 |
| BanII | GRGCYC | 1 cut(s) | 1609 |
| BauI | CACGAG | 1 cut(s) | 1602 |
| Bbv12I | GWGCWC | 3 cut(s) | 616, 1609, 1852 |
| BbvI | GCAGC | 3 cut(s) | 626, 1114, 1514 |
| BccI | CCATC | 7 cut(s) | 443, 551, 989, 1445, 1624, 1739, 1784 |
| BciT130I | CCWGG | 1 cut(s) | 501 |
| BcoDI | GTCTC | 2 cut(s) | 656, 739 |
| BfaI | CTAG | 5 cut(s) | 693, 957, 1013, 1245, 1623 |
| BfmI | CTRYAG | 3 cut(s) | 417, 1236, 1425 |
| BfuAI | ACCTGC | 2 cut(s) | 1243, 1872 |
| BisI | GCNGC | 4 cut(s) | 267, 640, 1128, 1503 |
| BlpI | GCTNAGC | 1 cut(s) | 248 |
| BlsI | GCNGC | 4 cut(s) | 268, 641, 1129, 1504 |
| Bme1390I | CCNGG | 1 cut(s) | 501 |
| Bme18I | GGWCC | 2 cut(s) | 62, 174 |
| BmgT120I | GGNCC | 3 cut(s) | 24, 62, 174 |
| BmiI | GGNNCC | 8 cut(s) | 63, 176, 498, 883, 1004, 1010, 1679, 1805 |
| BmrFI | CCNGG | 1 cut(s) | 501 |
| BmrI | ACTGGG | 3 cut(s) | 295, 326, 387 |
| BmsI | GCATC | 4 cut(s) | 127, 964, 1114, 1514 |
| BmuI | ACTGGG | 3 cut(s) | 295, 326, 387 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 236, 268 |
| BpmI | CTGGAG | 1 cut(s) | 522 |
| Bpu10I | CCTNAGC | 1 cut(s) | 643 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 248 |
| Bpu14I | TTCGAA | 2 cut(s) | 853, 1297 |
| BsaBI | GATNNNNATC | 2 cut(s) | 402, 863 |
| BsaJI | CCNNGG | 5 cut(s) | 53, 1040, 1345, 1718, 1867 |
| BsaWI | WCCGGW | 5 cut(s) | 751, 828, 1005, 1149, 1734 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 11, 59, 265, 1719, 1828 |
| Bse118I | RCCGGY | 4 cut(s) | 828, 1005, 1149, 1734 |
| Bse1I | ACTGG | 5 cut(s) | 301, 332, 382, 949, 1594 |
| Bse3DI | GCAATG | 4 cut(s) | 261, 724, 1054, 1747 |
| Bse8I | GATNNNNATC | 2 cut(s) | 402, 863 |
| BseAI | TCCGGA | 1 cut(s) | 751 |
| BseBI | CCWGG | 1 cut(s) | 501 |
| BseDI | CCNNGG | 5 cut(s) | 53, 1040, 1345, 1718, 1867 |
| BseGI | GGATG | 2 cut(s) | 562, 748 |
| BseJI | GATNNNNATC | 2 cut(s) | 402, 863 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 11, 59, 265, 1719, 1828 |
| BseMI | GCAATG | 4 cut(s) | 261, 724, 1054, 1747 |
| BseMII | CTCAG | 6 cut(s) | 8, 342, 354, 608, 1416, 1835 |
| BseNI | ACTGG | 5 cut(s) | 301, 332, 382, 949, 1594 |
| BseSI | GKGCMC | 2 cut(s) | 1806, 1852 |
| BseXI | GCAGC | 3 cut(s) | 626, 1114, 1514 |
| BseYI | CCCAGC | 1 cut(s) | 1673 |
| Bsh1236I | CGCG | 1 cut(s) | 346 |
| BshFI | GGCC | 4 cut(s) | 25, 697, 1225, 1761 |
| BshNI | GGYRCC | 3 cut(s) | 1002, 1008, 1803 |
| BshTI | ACCGGT | 4 cut(s) | 828, 1005, 1149, 1734 |
| BsiHKAI | GWGCWC | 3 cut(s) | 616, 1609, 1852 |
| BsiSI | CCGG | 6 cut(s) | 5, 752, 829, 1006, 1150, 1735 |
| BslFI | GGGAC | 3 cut(s) | 27, 160, 692 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 11, 59, 265, 1719, 1828 |
| BsmAI | GTCTC | 2 cut(s) | 656, 739 |
| BsmFI | GGGAC | 3 cut(s) | 27, 160, 692 |
| BsmI | GAATGC | 2 cut(s) | 1613, 1637 |
| BsnI | GGCC | 4 cut(s) | 25, 697, 1225, 1761 |
| Bsp119I | TTCGAA | 2 cut(s) | 853, 1297 |
| Bsp1286I | GDGCHC | 4 cut(s) | 616, 1609, 1806, 1852 |
| Bsp13I | TCCGGA | 1 cut(s) | 751 |
| Bsp143I | GATC | 9 cut(s) | 565, 667, 722, 841, 1219, 1475, 1677, 1797, 1831 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 248 |
| Bsp19I | CCATGG | 1 cut(s) | 1040 |
| BspACI | CCGC | 5 cut(s) | 178, 266, 885, 1092, 1593 |
| BspANI | GGCC | 4 cut(s) | 25, 697, 1225, 1761 |
| BspCNI | CTCAG | 6 cut(s) | 9, 343, 355, 609, 1415, 1836 |
| BspEI | TCCGGA | 1 cut(s) | 751 |
| BspFNI | CGCG | 1 cut(s) | 346 |
| BspHI | TCATGA | 2 cut(s) | 325, 1431 |
| BspLI | GGNNCC | 8 cut(s) | 63, 176, 498, 883, 1004, 1010, 1679, 1805 |
| BspMAI | CTGCAG | 1 cut(s) | 1240 |
| BspMI | ACCTGC | 2 cut(s) | 1243, 1872 |
| BspPI | GGATC | 6 cut(s) | 573, 730, 1227, 1672, 1685, 1839 |
| BspT104I | TTCGAA | 2 cut(s) | 853, 1297 |
| BspT107I | GGYRCC | 3 cut(s) | 1002, 1008, 1803 |
| BsrDI | GCAATG | 4 cut(s) | 261, 724, 1054, 1747 |
| BsrFI | RCCGGY | 4 cut(s) | 828, 1005, 1149, 1734 |
| BsrI | ACTGG | 5 cut(s) | 301, 332, 382, 949, 1594 |
| BssAI | RCCGGY | 4 cut(s) | 828, 1005, 1149, 1734 |
| BssECI | CCNNGG | 5 cut(s) | 53, 1040, 1345, 1718, 1867 |
| BssMI | GATC | 9 cut(s) | 565, 667, 722, 841, 1219, 1475, 1677, 1797, 1831 |
| BssSI | CACGAG | 1 cut(s) | 1602 |
| BssT1I | CCWWGG | 4 cut(s) | 53, 1040, 1345, 1867 |
| Bst2BI | CACGAG | 1 cut(s) | 1602 |
| Bst2UI | CCWGG | 1 cut(s) | 501 |
| Bst4CI | ACNGT | 7 cut(s) | 532, 1100, 1251, 1294, 1414, 1426, 1582 |
| Bst6I | CTCTTC | 1 cut(s) | 925 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1499, 1856 |
| BstBI | TTCGAA | 2 cut(s) | 853, 1297 |
| BstC8I | GCNNGC | 5 cut(s) | 23, 963, 1495, 1861, 1879 |
| BstDEI | CTNAG | 9 cut(s) | 17, 47, 248, 351, 363, 617, 643, 1402, 1844 |
| BstDSI | CCRYGG | 2 cut(s) | 1040, 1718 |
| BstF5I | GGATG | 2 cut(s) | 562, 748 |
| BstFNI | CGCG | 1 cut(s) | 346 |
| BstKTI | GATC | 9 cut(s) | 568, 670, 725, 844, 1222, 1478, 1680, 1800, 1834 |
| BstMAI | GTCTC | 2 cut(s) | 656, 739 |
| BstMBI | GATC | 9 cut(s) | 565, 667, 722, 841, 1219, 1475, 1677, 1797, 1831 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 76, 364, 1127, 1499, 1856 |
| BstNI | CCWGG | 1 cut(s) | 501 |
| BstNSI | RCATGY | 1 cut(s) | 965 |
| BstSCI | CCNGG | 1 cut(s) | 499 |
| BstSFI | CTRYAG | 3 cut(s) | 417, 1236, 1425 |
| BstSLI | GKGCMC | 2 cut(s) | 1806, 1852 |
| BstUI | CGCG | 1 cut(s) | 346 |
| BstV1I | GCAGC | 3 cut(s) | 626, 1114, 1514 |
| BstX2I | RGATCY | 3 cut(s) | 565, 722, 1677 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 239, 1041 |
| BstYI | RGATCY | 3 cut(s) | 565, 722, 1677 |
| BsuRI | GGCC | 4 cut(s) | 25, 697, 1225, 1761 |
| BtgI | CCRYGG | 2 cut(s) | 1040, 1718 |
| BtsCI | GGATG | 2 cut(s) | 562, 748 |
| BtsIMutI | CAGTG | 3 cut(s) | 537, 614, 1096 |
| BveI | ACCTGC | 2 cut(s) | 1243, 1872 |
| Cac8I | GCNNGC | 5 cut(s) | 23, 963, 1495, 1861, 1879 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1424 |
| CciI | TCATGA | 2 cut(s) | 325, 1431 |
| Cfr10I | RCCGGY | 4 cut(s) | 828, 1005, 1149, 1734 |
| Cfr13I | GGNCC | 3 cut(s) | 24, 62, 174 |
| CseI | GACGC | 1 cut(s) | 121 |
| Csp6I | GTAC | 3 cut(s) | 1003, 1575, 1751 |
| CspAI | ACCGGT | 4 cut(s) | 828, 1005, 1149, 1734 |
| CviAII | CATG | 8 cut(s) | 39, 233, 326, 684, 962, 1041, 1432, 1795 |
| CviQI | GTAC | 3 cut(s) | 1003, 1575, 1751 |
| DdeI | CTNAG | 9 cut(s) | 17, 47, 248, 351, 363, 617, 643, 1402, 1844 |
| DpnI | GATC | 9 cut(s) | 567, 669, 724, 843, 1221, 1477, 1679, 1799, 1833 |
| DpnII | GATC | 9 cut(s) | 565, 667, 722, 841, 1219, 1475, 1677, 1797, 1831 |
| DraIII | CACNNNGTG | 2 cut(s) | 620, 1856 |
| EaeI | YGGCCR | 1 cut(s) | 1759 |
| Eam1104I | CTCTTC | 1 cut(s) | 925 |
| EarI | CTCTTC | 1 cut(s) | 925 |
| Ecl136II | GAGCTC | 1 cut(s) | 1607 |
| Eco130I | CCWWGG | 4 cut(s) | 53, 1040, 1345, 1867 |
| Eco147I | AGGCCT | 1 cut(s) | 697 |
| Eco24I | GRGCYC | 1 cut(s) | 1609 |
| Eco47I | GGWCC | 2 cut(s) | 62, 174 |
| Eco53kI | GAGCTC | 1 cut(s) | 1607 |
| EcoICRI | GAGCTC | 1 cut(s) | 1607 |
| EcoO109I | RGGNCCY | 2 cut(s) | 62, 174 |
| EcoRI | GAATTC | 2 cut(s) | 370, 1354 |
| EcoRII | CCWGG | 1 cut(s) | 499 |
| EcoT14I | CCWWGG | 4 cut(s) | 53, 1040, 1345, 1867 |
| EcoT38I | GRGCYC | 1 cut(s) | 1609 |
| ErhI | CCWWGG | 4 cut(s) | 53, 1040, 1345, 1867 |
| FaeI | CATG | 8 cut(s) | 42, 236, 329, 687, 965, 1044, 1435, 1798 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1382, 1414 |
| FaqI | GGGAC | 3 cut(s) | 27, 160, 692 |
| FatI | CATG | 8 cut(s) | 38, 232, 325, 683, 961, 1040, 1431, 1794 |
| FauI | CCCGC | 2 cut(s) | 185, 1586 |
| FblI | GTMKAC | 1 cut(s) | 1818 |
| Fnu4HI | GCNGC | 4 cut(s) | 267, 640, 1128, 1503 |
| FokI | GGATG | 2 cut(s) | 569, 735 |
| FriOI | GRGCYC | 1 cut(s) | 1609 |
| Fsp4HI | GCNGC | 4 cut(s) | 267, 640, 1128, 1503 |
| FspBI | CTAG | 5 cut(s) | 693, 957, 1013, 1245, 1623 |
| GluI | GCNGC | 4 cut(s) | 267, 640, 1128, 1503 |
| GsaI | CCCAGC | 1 cut(s) | 1677 |
| GsuI | CTGGAG | 1 cut(s) | 522 |
| HaeIII | GGCC | 4 cut(s) | 25, 697, 1225, 1761 |
| HapII | CCGG | 6 cut(s) | 5, 752, 829, 1006, 1150, 1735 |
| HgaI | GACGC | 1 cut(s) | 121 |
| Hin1II | CATG | 8 cut(s) | 42, 236, 329, 687, 965, 1044, 1435, 1798 |
| HincII | GTYRAC | 1 cut(s) | 1186 |
| HindII | GTYRAC | 1 cut(s) | 1186 |
| HindIII | AAGCTT | 1 cut(s) | 183 |
| HinfI | GANTC | 9 cut(s) | 320, 353, 475, 680, 917, 1172, 1187, 1529, 1563 |
| HpaII | CCGG | 6 cut(s) | 5, 752, 829, 1006, 1150, 1735 |
| HphI | GGTGA | 3 cut(s) | 599, 813, 1181 |
| Hpy166II | GTNNAC | 7 cut(s) | 873, 954, 1087, 1186, 1753, 1819, 1850 |
| Hpy188I | TCNGA | 6 cut(s) | 352, 364, 448, 570, 922, 1405 |
| Hpy188III | TCNNGA | 7 cut(s) | 326, 548, 752, 845, 1418, 1432, 1440 |
| Hpy8I | GTNNAC | 7 cut(s) | 873, 954, 1087, 1186, 1753, 1819, 1850 |
| Hpy99I | CGWCG | 1 cut(s) | 137 |
| HpyAV | CCTTC | 8 cut(s) | 4, 265, 700, 942, 1293, 1364, 1660, 1723 |
| HpyCH4III | ACNGT | 7 cut(s) | 532, 1100, 1251, 1294, 1414, 1426, 1582 |
| HpyCH4IV | ACGT | 2 cut(s) | 465, 1182 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 76, 364, 1127, 1499, 1856 |
| HpyF3I | CTNAG | 9 cut(s) | 17, 47, 248, 351, 363, 617, 643, 1402, 1844 |
| HpySE526I | ACGT | 2 cut(s) | 465, 1182 |
| Hsp92II | CATG | 8 cut(s) | 42, 236, 329, 687, 965, 1044, 1435, 1798 |
| Kpn2I | TCCGGA | 1 cut(s) | 751 |
| KpnI | GGTACC | 1 cut(s) | 1006 |
| Kzo9I | GATC | 9 cut(s) | 565, 667, 722, 841, 1219, 1475, 1677, 1797, 1831 |
| LmnI | GCTCC | 5 cut(s) | 129, 244, 257, 502, 887 |
| Lsp1109I | GCAGC | 3 cut(s) | 626, 1114, 1514 |
| LweI | GCATC | 4 cut(s) | 127, 964, 1114, 1514 |
| MaeI | CTAG | 5 cut(s) | 693, 957, 1013, 1245, 1623 |
| MaeII | ACGT | 2 cut(s) | 465, 1182 |
| MaeIII | GTNAC | 4 cut(s) | 193, 295, 466, 576 |
| MalI | GATC | 9 cut(s) | 567, 669, 724, 843, 1221, 1477, 1679, 1799, 1833 |
| MboI | GATC | 9 cut(s) | 565, 667, 722, 841, 1219, 1475, 1677, 1797, 1831 |
| MboII | GAAGA | 3 cut(s) | 942, 1153, 1156 |
| MfeI | CAATTG | 1 cut(s) | 1642 |
| MflI | RGATCY | 3 cut(s) | 565, 722, 1677 |
| MhlI | GDGCHC | 4 cut(s) | 616, 1609, 1806, 1852 |
| MlyI | GAGTC | 6 cut(s) | 362, 674, 926, 1181, 1538, 1572 |
| MmeI | TCCRAC | 5 cut(s) | 91, 375, 1047, 1200, 1809 |
| MnlI | CCTC | 8 cut(s) | 37, 200, 497, 645, 799, 1399, 1538, 1627 |
| MroI | TCCGGA | 1 cut(s) | 751 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1397 |
| MseI | TTAA | 4 cut(s) | 92, 212, 336, 1485 |
| MslI | CAYNNNNRTG | 3 cut(s) | 37, 237, 1326 |
| MspA1I | CMGCKG | 2 cut(s) | 584, 1121 |
| MspI | CCGG | 6 cut(s) | 5, 752, 829, 1006, 1150, 1735 |
| MspR9I | CCNGG | 1 cut(s) | 501 |
| MunI | CAATTG | 1 cut(s) | 1642 |
| Mva1269I | GAATGC | 2 cut(s) | 1613, 1637 |
| MvaI | CCWGG | 1 cut(s) | 501 |
| MvnI | CGCG | 1 cut(s) | 346 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 76, 364, 1127, 1499, 1856 |
| NcoI | CCATGG | 1 cut(s) | 1040 |
| NdeII | GATC | 9 cut(s) | 565, 667, 722, 841, 1219, 1475, 1677, 1797, 1831 |
| NlaIII | CATG | 8 cut(s) | 42, 236, 329, 687, 965, 1044, 1435, 1798 |
| NlaIV | GGNNCC | 8 cut(s) | 63, 176, 498, 883, 1004, 1010, 1679, 1805 |
| NmuCI | GTSAC | 3 cut(s) | 193, 295, 466 |
| NspI | RCATGY | 1 cut(s) | 965 |
| NspV | TTCGAA | 2 cut(s) | 853, 1297 |
| PaeI | GCATGC | 1 cut(s) | 965 |
| PagI | TCATGA | 2 cut(s) | 325, 1431 |
| PaqCI | CACCTGC | 1 cut(s) | 1872 |
| PceI | AGGCCT | 1 cut(s) | 697 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 850 |
| PctI | GAATGC | 2 cut(s) | 1613, 1637 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1397 |
| PfeI | GAWTC | 3 cut(s) | 320, 475, 1172 |
| PfoI | TCCNGGA | 1 cut(s) | 499 |
| PinAI | ACCGGT | 4 cut(s) | 828, 1005, 1149, 1734 |
| PkrI | GCNGC | 4 cut(s) | 268, 641, 1129, 1504 |
| PleI | GAGTC | 6 cut(s) | 361, 674, 925, 1181, 1537, 1571 |
| PpsI | GAGTC | 6 cut(s) | 361, 674, 925, 1181, 1537, 1571 |
| PpuMI | RGGWCCY | 2 cut(s) | 62, 174 |
| PshBI | ATTAAT | 1 cut(s) | 1485 |
| Psp124BI | GAGCTC | 1 cut(s) | 1609 |
| Psp5II | RGGWCCY | 2 cut(s) | 62, 174 |
| Psp6I | CCWGG | 1 cut(s) | 499 |
| PspFI | CCCAGC | 1 cut(s) | 1673 |
| PspGI | CCWGG | 1 cut(s) | 499 |
| PspN4I | GGNNCC | 8 cut(s) | 63, 176, 498, 883, 1004, 1010, 1679, 1805 |
| PspPI | GGNCC | 3 cut(s) | 24, 62, 174 |
| PspPPI | RGGWCCY | 2 cut(s) | 62, 174 |
| PstI | CTGCAG | 1 cut(s) | 1240 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1424 |
| PsuI | RGATCY | 3 cut(s) | 565, 722, 1677 |
| PvuII | CAGCTG | 2 cut(s) | 584, 1121 |
| RsaI | GTAC | 3 cut(s) | 1004, 1576, 1752 |
| RsaNI | GTAC | 3 cut(s) | 1003, 1575, 1751 |
| RseI | CAYNNNNRTG | 3 cut(s) | 37, 237, 1326 |
| SacI | GAGCTC | 1 cut(s) | 1609 |
| SaqAI | TTAA | 4 cut(s) | 92, 212, 336, 1485 |
| SatI | GCNGC | 4 cut(s) | 267, 640, 1128, 1503 |
| Sau3AI | GATC | 9 cut(s) | 565, 667, 722, 841, 1219, 1475, 1677, 1797, 1831 |
| Sau96I | GGNCC | 3 cut(s) | 24, 62, 174 |
| SchI | GAGTC | 6 cut(s) | 362, 674, 926, 1181, 1538, 1572 |
| ScrFI | CCNGG | 1 cut(s) | 501 |
| SduI | GDGCHC | 4 cut(s) | 616, 1609, 1806, 1852 |
| SfaNI | GCATC | 4 cut(s) | 127, 964, 1114, 1514 |
| SfcI | CTRYAG | 3 cut(s) | 417, 1236, 1425 |
| SfuI | TTCGAA | 2 cut(s) | 853, 1297 |
| SinI | GGWCC | 2 cut(s) | 62, 174 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 37, 237, 1326 |
| SphI | GCATGC | 1 cut(s) | 965 |
| SseBI | AGGCCT | 1 cut(s) | 697 |
| SsiI | CCGC | 5 cut(s) | 178, 266, 885, 1092, 1593 |
| SspMI | CTAG | 5 cut(s) | 693, 957, 1013, 1245, 1623 |
| SstI | GAGCTC | 1 cut(s) | 1609 |
| StuI | AGGCCT | 1 cut(s) | 697 |
| StyD4I | CCNGG | 1 cut(s) | 499 |
| StyI | CCWWGG | 4 cut(s) | 53, 1040, 1345, 1867 |
| TaaI | ACNGT | 7 cut(s) | 532, 1100, 1251, 1294, 1414, 1426, 1582 |
| TaiI | ACGT | 2 cut(s) | 468, 1185 |
| TaqI | TCGA | 8 cut(s) | 135, 610, 844, 853, 1190, 1297, 1704, 1728 |
| TauI | GCSGC | 1 cut(s) | 269 |
| TfiI | GAWTC | 3 cut(s) | 320, 475, 1172 |
| Tru1I | TTAA | 4 cut(s) | 92, 212, 336, 1485 |
| Tru9I | TTAA | 4 cut(s) | 92, 212, 336, 1485 |
| TscAI | CASTG | 3 cut(s) | 537, 621, 1103 |
| TseFI | GTSAC | 3 cut(s) | 193, 295, 466 |
| TseI | GCWGC | 3 cut(s) | 639, 1127, 1502 |
| Tsp45I | GTSAC | 3 cut(s) | 193, 295, 466 |
| TspRI | CASTG | 3 cut(s) | 537, 621, 1103 |
| VneI | GTGCAC | 1 cut(s) | 1848 |
| VpaK11BI | GGWCC | 2 cut(s) | 62, 174 |
| VspI | ATTAAT | 1 cut(s) | 1485 |
| XapI | RAATTY | 7 cut(s) | 370, 599, 744, 1021, 1261, 1354, 1381 |
| XceI | RCATGY | 1 cut(s) | 965 |
| XmiI | GTMKAC | 1 cut(s) | 1818 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1397 |
| XspI | CTAG | 5 cut(s) | 693, 957, 1013, 1245, 1623 |