Prupe.1G298400_v2.0.a1

Phytosulfokine precursor protein (PSK)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
29416697 .. 29417721
1025 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G298400.1

Sequence Viewer

Length: 294 bp
ATGAAAACAATGGCAAATGGGCTCAATTTGATCTTCCTTTTGGGTTTTCTACTTCTATTGTCAAGGGCAGAAGCCAGATCAATGCCTGCTGCCTCCATTTTACCTGAGTCTTATCCAAATGCTTCTTCTTCCAATATTCCCATAAGATCATCACCTATTGAGGAACCAAGCCTGGATGTGGATGATGATGATGCTTGCAAGGGTTTAAACAGTGAAGAGTGTTTGATCAGAAGGTCCATGGTTGCTCACACAGACTATATCTACACACAAGACATCAGCTCTACTGGACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

98

Amino Acids

10.55

Weight (kDa)

4.46

Isoelectric Point (pI)

86.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018026)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 178
AjnI CCWGG 1 cut(s) 171
AjuI GAANNNNNNNTTGG 2 cut(s) 109, 141
AluBI AGCT 1 cut(s) 279
AluI AGCT 1 cut(s) 279
ApeKI GCWGC 1 cut(s) 89
AspS9I GGNCC 2 cut(s) 234, 287
AsuHPI GGTGA 1 cut(s) 144
AvaII GGWCC 2 cut(s) 234, 287
BanII GRGCYC 1 cut(s) 24
BbvI GCAGC 1 cut(s) 76
BciT130I CCWGG 1 cut(s) 173
BclI TGATCA 1 cut(s) 225
BisI GCNGC 1 cut(s) 90
BlsI GCNGC 1 cut(s) 91
Bme1390I CCNGG 1 cut(s) 173
Bme18I GGWCC 2 cut(s) 234, 287
BmgT120I GGNCC 2 cut(s) 234, 287
BmiI GGNNCC 1 cut(s) 165
BmrFI CCNGG 1 cut(s) 173
BmsI GCATC 1 cut(s) 181
BsaJI CCNNGG 1 cut(s) 237
Bsc4I CCNNNNNNNGG 1 cut(s) 178
Bse1I ACTGG 1 cut(s) 289
BseBI CCWGG 1 cut(s) 173
BseDI CCNNGG 1 cut(s) 237
BseGI GGATG 2 cut(s) 181, 187
BseLI CCNNNNNNNGG 1 cut(s) 178
BseMII CTCAG 1 cut(s) 96
BseNI ACTGG 1 cut(s) 289
BseXI GCAGC 1 cut(s) 76
BslI CCNNNNNNNGG 1 cut(s) 178
Bsp1286I GDGCHC 1 cut(s) 24
Bsp143I GATC 4 cut(s) 30, 77, 146, 225
Bsp19I CCATGG 1 cut(s) 237
BspCNI CTCAG 1 cut(s) 97
BspLI GGNNCC 1 cut(s) 165
BsrI ACTGG 1 cut(s) 289
BssECI CCNNGG 1 cut(s) 237
BssMI GATC 4 cut(s) 30, 77, 146, 225
BssT1I CCWWGG 1 cut(s) 237
Bst2UI CCWGG 1 cut(s) 173
Bst4CI ACNGT 1 cut(s) 212
Bst6I CTCTTC 1 cut(s) 210
BstC8I GCNNGC 2 cut(s) 87, 196
BstDEI CTNAG 1 cut(s) 105
BstDSI CCRYGG 1 cut(s) 237
BstF5I GGATG 2 cut(s) 181, 187
BstKTI GATC 4 cut(s) 33, 80, 149, 228
BstMBI GATC 4 cut(s) 30, 77, 146, 225
BstNI CCWGG 1 cut(s) 173
BstSCI CCNGG 1 cut(s) 171
BstV1I GCAGC 1 cut(s) 76
BtgI CCRYGG 1 cut(s) 237
BtsCI GGATG 2 cut(s) 181, 187
BtsIMutI CAGTG 1 cut(s) 217
Cac8I GCNNGC 2 cut(s) 87, 196
Cfr13I GGNCC 2 cut(s) 234, 287
CviAII CATG 2 cut(s) 238, 291
CviJI RGCY 4 cut(s) 22, 74, 171, 279
CviKI_1 RGCY 4 cut(s) 22, 74, 171, 279
DdeI CTNAG 1 cut(s) 105
DpnI GATC 4 cut(s) 32, 79, 148, 227
DpnII GATC 4 cut(s) 30, 77, 146, 225
DraI TTTAAA 1 cut(s) 207
Eam1104I CTCTTC 1 cut(s) 210
EarI CTCTTC 1 cut(s) 210
Eco130I CCWWGG 1 cut(s) 237
Eco24I GRGCYC 1 cut(s) 24
Eco47I GGWCC 2 cut(s) 234, 287
EcoRII CCWGG 1 cut(s) 171
EcoT14I CCWWGG 1 cut(s) 237
EcoT38I GRGCYC 1 cut(s) 24
ErhI CCWWGG 1 cut(s) 237
FaeI CATG 2 cut(s) 241, 294
FaiI YATR 4 cut(s) 143, 239, 258, 292
FatI CATG 2 cut(s) 237, 290
FbaI TGATCA 1 cut(s) 225
Fnu4HI GCNGC 1 cut(s) 90
FokI GGATG 2 cut(s) 188, 194
FriOI GRGCYC 1 cut(s) 24
Fsp4HI GCNGC 1 cut(s) 90
GluI GCNGC 1 cut(s) 90
Hin1II CATG 2 cut(s) 241, 294
HinfI GANTC 1 cut(s) 107
HphI GGTGA 1 cut(s) 144
Hpy188I TCNGA 1 cut(s) 230
HpyAV CCTTC 1 cut(s) 225
HpyCH4III ACNGT 1 cut(s) 212
HpyCH4V TGCA 1 cut(s) 198
HpyF3I CTNAG 1 cut(s) 105
Hsp92II CATG 2 cut(s) 241, 294
Ksp22I TGATCA 1 cut(s) 225
Kzo9I GATC 4 cut(s) 30, 77, 146, 225
LpnPI CCDG 6 cut(s) 88, 99, 117, 158, 185, 270
Lsp1109I GCAGC 1 cut(s) 76
LweI GCATC 1 cut(s) 181
MalI GATC 4 cut(s) 32, 79, 148, 227
MboI GATC 4 cut(s) 30, 77, 146, 225
MboII GAAGA 4 cut(s) 25, 117, 120, 227
MhlI GDGCHC 1 cut(s) 24
MluCI AATT 1 cut(s) 25
MlyI GAGTC 1 cut(s) 116
MnlI CCTC 2 cut(s) 103, 154
MseI TTAA 1 cut(s) 206
MspR9I CCNGG 1 cut(s) 173
MssI GTTTAAAC 1 cut(s) 207
MvaI CCWGG 1 cut(s) 173
NcoI CCATGG 1 cut(s) 237
NdeII GATC 4 cut(s) 30, 77, 146, 225
NlaIII CATG 2 cut(s) 241, 294
NlaIV GGNNCC 1 cut(s) 165
PkrI GCNGC 1 cut(s) 91
PleI GAGTC 1 cut(s) 115
PmeI GTTTAAAC 1 cut(s) 207
PpsI GAGTC 1 cut(s) 115
Psp6I CCWGG 1 cut(s) 171
PspGI CCWGG 1 cut(s) 171
PspN4I GGNNCC 1 cut(s) 165
PspPI GGNCC 2 cut(s) 234, 287
SaqAI TTAA 1 cut(s) 206
SatI GCNGC 1 cut(s) 90
Sau3AI GATC 4 cut(s) 30, 77, 146, 225
Sau96I GGNCC 2 cut(s) 234, 287
SchI GAGTC 1 cut(s) 116
ScrFI CCNGG 1 cut(s) 173
SduI GDGCHC 1 cut(s) 24
SetI ASST 4 cut(s) 106, 157, 236, 281
SfaNI GCATC 1 cut(s) 181
SinI GGWCC 2 cut(s) 234, 287
Sse9I AATT 1 cut(s) 25
SspI AATATT 1 cut(s) 136
StyD4I CCNGG 1 cut(s) 171
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 1 cut(s) 212
TasI AATT 1 cut(s) 25
Tru1I TTAA 1 cut(s) 206
Tru9I TTAA 1 cut(s) 206
TscAI CASTG 1 cut(s) 217
TseI GCWGC 1 cut(s) 89
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 217
VpaK11BI GGWCC 2 cut(s) 234, 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.