Rmu_sc0001464.1_g000019

Phytosulfokine precursor protein (PSK)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001464.1
Physical Location & Seq
Reverse (-)
86339 .. 86654
316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001464.1_g000019.1.cds

Sequence Viewer

Length: 219 bp
atgcctgcagctcccattttgcctccatctgatccaaatttttcatcttcttccatttccataacatcatcatcacctaatggggcaagcctgagtgatattgatgatgatgatgcttgcaagggtttaaacagcaaggactgtttgatgagaaggtcgttggttgcccacacagattacatctacacacaggatatcagcactagtactgaaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

72

Amino Acids

7.61

Weight (kDa)

4.12

Isoelectric Point (pI)

70.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018026)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 26
AcsI RAATTY 1 cut(s) 37
AfaI GTAC 1 cut(s) 208
AhlI ACTAGT 1 cut(s) 203
AluBI AGCT 1 cut(s) 11
AluI AGCT 1 cut(s) 11
AlwI GGATC 1 cut(s) 26
ApeKI GCWGC 1 cut(s) 8
ApoI RAATTY 1 cut(s) 37
AsuHPI GGTGA 1 cut(s) 66
BbvI GCAGC 1 cut(s) 20
BccI CCATC 1 cut(s) 34
BcuI ACTAGT 1 cut(s) 203
BfaI CTAG 1 cut(s) 204
BfmI CTRYAG 1 cut(s) 6
BisI GCNGC 1 cut(s) 9
BlsI GCNGC 1 cut(s) 10
BmcAI AGTACT 1 cut(s) 208
BmsI GCATC 1 cut(s) 103
BseMII CTCAG 1 cut(s) 83
BseXI GCAGC 1 cut(s) 20
Bsp143I GATC 1 cut(s) 31
BspCNI CTCAG 1 cut(s) 84
BspMAI CTGCAG 1 cut(s) 10
BspPI GGATC 1 cut(s) 26
BssMI GATC 1 cut(s) 31
Bst4CI ACNGT 1 cut(s) 143
BstC8I GCNNGC 3 cut(s) 6, 88, 118
BstDEI CTNAG 1 cut(s) 92
BstKTI GATC 1 cut(s) 34
BstMBI GATC 1 cut(s) 31
BstSFI CTRYAG 1 cut(s) 6
BstV1I GCAGC 1 cut(s) 20
Cac8I GCNNGC 3 cut(s) 6, 88, 118
Csp6I GTAC 1 cut(s) 207
CviJI RGCY 2 cut(s) 11, 90
CviKI_1 RGCY 2 cut(s) 11, 90
CviQI GTAC 1 cut(s) 207
DdeI CTNAG 1 cut(s) 92
DpnI GATC 1 cut(s) 33
DpnII GATC 1 cut(s) 31
DraI TTTAAA 1 cut(s) 129
Eco32I GATATC 1 cut(s) 196
EcoRV GATATC 1 cut(s) 196
FaiI YATR 1 cut(s) 62
Fnu4HI GCNGC 1 cut(s) 9
Fsp4HI GCNGC 1 cut(s) 9
FspBI CTAG 1 cut(s) 204
GluI GCNGC 1 cut(s) 9
HphI GGTGA 1 cut(s) 66
Hpy188I TCNGA 1 cut(s) 31
HpyAV CCTTC 1 cut(s) 147
HpyCH4III ACNGT 1 cut(s) 143
HpyCH4V TGCA 2 cut(s) 8, 120
HpyF3I CTNAG 1 cut(s) 92
Kzo9I GATC 1 cut(s) 31
LmnI GCTCC 1 cut(s) 16
LpnPI CCDG 3 cut(s) 18, 104, 176
Lsp1109I GCAGC 1 cut(s) 20
LweI GCATC 1 cut(s) 103
MaeI CTAG 1 cut(s) 204
MalI GATC 1 cut(s) 33
MboI GATC 1 cut(s) 31
MboII GAAGA 2 cut(s) 39, 42
MluCI AATT 1 cut(s) 37
MnlI CCTC 1 cut(s) 33
MseI TTAA 1 cut(s) 128
MssI GTTTAAAC 1 cut(s) 129
NdeII GATC 1 cut(s) 31
PkrI GCNGC 1 cut(s) 10
PmeI GTTTAAAC 1 cut(s) 129
PstI CTGCAG 1 cut(s) 10
RsaI GTAC 1 cut(s) 208
RsaNI GTAC 1 cut(s) 207
SaqAI TTAA 1 cut(s) 128
SatI GCNGC 1 cut(s) 9
Sau3AI GATC 1 cut(s) 31
ScaI AGTACT 1 cut(s) 208
SetI ASST 4 cut(s) 13, 79, 158, 217
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 6
SgeI CNNG 7 cut(s) 17, 99, 103, 129, 133, 148, 203
SpeI ACTAGT 1 cut(s) 203
Sse9I AATT 1 cut(s) 37
SspMI CTAG 1 cut(s) 204
TaaI ACNGT 1 cut(s) 143
TasI AATT 1 cut(s) 37
TatI WGTACW 1 cut(s) 206
Tru1I TTAA 1 cut(s) 128
Tru9I TTAA 1 cut(s) 128
TseI GCWGC 1 cut(s) 8
TspDTI ATGAA 1 cut(s) 33
XapI RAATTY 1 cut(s) 37
XspI CTAG 1 cut(s) 204
ZrmI AGTACT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.