Prupe.1G298500_v2.0.a1
TCP Family

Belongs to the chaperonin (HSP60) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
29418866 .. 29422960
4095 bp
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UTR
Exon/CDS
Intron
Prupe.1G298500.1

Sequence Viewer

Length: 1866 bp
ATGGCATTTTCTCCAACTCCCATCTCTTCTTTCTCCTTCACCAACCCAACACTGCCCAAAAGGATTTCTTCAGTACCTTCTGCAGTAAACTCAAAAGGTGTAGCCAAAGATCTCATCTTTAACCACGACGGTTCTGCCACAAAGAAGCTTCTGGCAGGCGTGGACATGGTGGCAGAGCTGGTTGGGGTTACGTTGGGCCCAAAGGGAAGGAATGTGGTGCTGCAGAATAAGTATGGACCTCCCAAGATTGTCAATGACGGTGAAACTGTCCTCAAACAGATTGAGTTGGAGGACCCTGTGGAGAATGTTGGAGTGAAATTGGTGAGGCAAGCTGGTGCAAAAACAAATGATCTGGCTGGAGATGGTTCCACTACAGCTGTAATTCTTGCTCATGGCTTAATCACTGAAGGTGTGAAGGTTACTGCAGCTGGCTTGAACCCCATTCAAATTGCTCGTGGCATTGAGAAAACTGCGGCCGCGCTCGTTTCTGAACTCAAATTGATGTCCAGAGAGATTGAGGATCATGAGCTTGCACATGTTGCTGCAGTTAGTGCAGGCAATGATTTTGCAGTGGGGAATATGATTTATGATGCTCTTCTTCAAGTAGGAAAGAAGGGTGTGGTTACTATTGAACAAGGGAAATGTACAGAGAACAATCTACAAATTGTGGAAGGAATGCAGTTTGATCGTGGATACTTATCCCCTTACTTTGTCACTGATAGAAGAAGAAGGATAGTGGAGTTTCAAAACTGTAAGTTACTTTTGGTCGACAAGAAAATTACAAACCCGAAGGAGATGTTTAAATTATTGGACAATGCAGTGCAAGAAAAGTATCCAATGGTGATAGTTGCAGAGGGCATTGAGCAGGAAGCTCTAGCTCCAGTAATTAGAAACAAACTCAGAGGTGTGCTGAAAGCAGCTGCTATTAAAGCTCCTGCCTTTGGTGAGCGCAAAAGCCACTACTTAGATGACATTGCCATCTTGACTGGAGGAACCGTAGTAAGAGATGAGATGGGGATTATCCTAGAACATGCTAACAAGGAGGTTTTGGGTACTGCTACTAAAGTTGTGATAACTAAGGATTCTACATTGATAGTTACCGATGGTAGCACTCGCGAAGCTGTTGAAAAGAGGGTTTCTCAGATACGAAAGCTTGTTGAGAACACTGAAGAAGAATTTCAAAAGAAGATATTAAATGAAAGAATAGCAAGATTATCGGGGGGAATTGCTATTCTGCAGGTAGGAGCACAAACACAAGTTGAGTTAAAAGATAAACAACTTAGAATCGAAGATGCTTTGAATGCGACCAAGGCAGCAATTGAGGAAGGTGTTGTAGTTGGTGGTGGCTGCAGTCTTTTAAGGCTCTCCAAAAAGGTGGATGGTATTAAAGAACTTTTGGATAATGAAGAACAGAAGATCGGAGCAGAAATCTTCAAGAGAGCTTTAAGCTATCCTGTAAAACTGATAGCAAAAAATGCAGGTGTAAATGGAAATGTTGTGGTAGAGAAGATTCTATCTAACGATAATATTGGGTATGGATATAATGCTGCGAAAGACTGTTACGAGGACCTAATGAAAGCTGGGATCATGGATCCATCAAAGGTTGTTAGATGTTGTTTGGAGCATGCTGCATCAGTCGCCAAAACTTTTCTGACATCCGACGCTGTTGTAGTCGACATTAAGGAAACACAACCCTTTCCAAGAAGAATGCCACCAAAACTACCCAATATCCCAAGAAGAATGCCACCAGAACTGCCCAATATTCCAAGAAGAATGCCACCAGACCTGCCCAATATCCCAAGAAGAAGGCCAACACCAATGTCCATATCCATGCCAAACTCAGGTGCTGGATCATTTGGCCTTTAG

Protein Analysis

622

Amino Acids

67.34

Weight (kDa)

8.96

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1469
Acc36I ACCTGC 3 cut(s) 1228, 1469, 1794
AccI GTMKAC 2 cut(s) 768, 1674
AccII CGCG 2 cut(s) 479, 1116
AciI CCGC 2 cut(s) 473, 477
AclWI GGATC 5 cut(s) 528, 1586, 1592, 1599, 1858
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 1 cut(s) 1175
AcuI CTGAAG 3 cut(s) 54, 426, 1188
AfaI GTAC 3 cut(s) 75, 646, 1054
AfiI CCNNNNNNNGG 2 cut(s) 941, 1841
AflIII ACRYGT 1 cut(s) 535
AgsI TTSAA 9 cut(s) 436, 446, 602, 632, 746, 1127, 1181, 1300, 1435
Alw21I GWGCWC 1 cut(s) 1249
AlwI GGATC 5 cut(s) 528, 1586, 1592, 1599, 1858
AlwNI CAGNNNCTG 1 cut(s) 1847
AoxI GGCC 4 cut(s) 196, 474, 1808, 1858
ApaI GGGCCC 1 cut(s) 200
ApeKI GCWGC 9 cut(s) 220, 425, 542, 917, 920, 1313, 1347, 1547, 1628
ApoI RAATTY 1 cut(s) 1175
Asp700I GAANNNNTTC 1 cut(s) 1176
AspLEI GCGC 2 cut(s) 481, 951
AspS9I GGNCC 5 cut(s) 196, 197, 236, 292, 1567
AsuHPI GGTGA 5 cut(s) 31, 272, 334, 853, 956
AvaII GGWCC 3 cut(s) 236, 292, 1567
BaeGI GKGCMC 1 cut(s) 200
BamHI GGATCC 1 cut(s) 1591
BanII GRGCYC 1 cut(s) 200
BauI CACGAG 1 cut(s) 453
Bbv12I GWGCWC 1 cut(s) 1249
BbvI GCAGC 9 cut(s) 207, 437, 529, 907, 929, 1325, 1334, 1534, 1615
BccI CCATC 7 cut(s) 29, 356, 986, 1006, 1097, 1373, 1603
BcgI CGANNNNNNTGC 6 cut(s) 116, 150, 668, 702, 1197, 1231
BciVI GTATCC 2 cut(s) 686, 843
BfaI CTAG 2 cut(s) 875, 1025
BfmI CTRYAG 7 cut(s) 81, 221, 372, 423, 543, 1235, 1348
BfuAI ACCTGC 3 cut(s) 1228, 1469, 1794
BfuI GTATCC 2 cut(s) 686, 843
BglII AGATCT 1 cut(s) 109
Bme18I GGWCC 3 cut(s) 236, 292, 1567
BmgT120I GGNCC 5 cut(s) 196, 197, 236, 292, 1567
BmiI GGNNCC 5 cut(s) 198, 294, 367, 994, 1593
BmsI GCATC 3 cut(s) 580, 1282, 1640
BplI GAGNNNNNCTC 2 cut(s) 1123, 1155
BpmI CTGGAG 3 cut(s) 378, 864, 1008
BsaBI GATNNNNATC 1 cut(s) 697
BsaJI CCNNGG 1 cut(s) 1308
BsaXI ACNNNNNCTCC 2 cut(s) 981, 1011
Bsc4I CCNNNNNNNGG 2 cut(s) 941, 1841
Bse1I ACTGG 2 cut(s) 881, 991
Bse3DI GCAATG 2 cut(s) 565, 972
Bse8I GATNNNNATC 1 cut(s) 697
BseDI CCNNGG 1 cut(s) 1308
BseGI GGATG 2 cut(s) 1384, 1655
BseJI GATNNNNATC 1 cut(s) 697
BseLI CCNNNNNNNGG 2 cut(s) 941, 1841
BseMI GCAATG 2 cut(s) 565, 972
BseMII CTCAG 3 cut(s) 913, 1154, 1854
BseNI ACTGG 2 cut(s) 881, 991
BseSI GKGCMC 1 cut(s) 200
BseX3I CGGCCG 1 cut(s) 474
BseXI GCAGC 9 cut(s) 207, 437, 529, 907, 929, 1325, 1334, 1534, 1615
BseYI CCCAGC 1 cut(s) 1580
BsgI GTGCAG 1 cut(s) 573
Bsh1236I CGCG 2 cut(s) 479, 1116
Bsh1285I CGRYCG 1 cut(s) 477
BshFI GGCC 4 cut(s) 198, 476, 1810, 1860
BsiEI CGRYCG 1 cut(s) 477
BsiHKAI GWGCWC 1 cut(s) 1249
BslI CCNNNNNNNGG 2 cut(s) 941, 1841
BsmI GAATGC 5 cut(s) 681, 1306, 1713, 1746, 1779
BsnI GGCC 4 cut(s) 198, 476, 1810, 1860
Bsp120I GGGCCC 1 cut(s) 196
Bsp1286I GDGCHC 2 cut(s) 200, 1249
Bsp1407I TGTACA 1 cut(s) 644
Bsp143I GATC 8 cut(s) 109, 349, 520, 685, 1416, 1584, 1591, 1850
Bsp68I TCGCGA 1 cut(s) 1116
BspACI CCGC 2 cut(s) 473, 477
BspANI GGCC 4 cut(s) 198, 476, 1810, 1860
BspCNI CTCAG 3 cut(s) 912, 1153, 1853
BspFNI CGCG 2 cut(s) 479, 1116
BspHI TCATGA 1 cut(s) 523
BspLI GGNNCC 5 cut(s) 198, 294, 367, 994, 1593
BspMAI CTGCAG 6 cut(s) 85, 225, 427, 547, 1239, 1352
BspMI ACCTGC 3 cut(s) 1228, 1469, 1794
BspPI GGATC 5 cut(s) 528, 1586, 1592, 1599, 1858
BspQI GCTCTTC 1 cut(s) 600
BsrDI GCAATG 2 cut(s) 565, 972
BsrGI TGTACA 1 cut(s) 644
BsrI ACTGG 2 cut(s) 881, 991
BssECI CCNNGG 1 cut(s) 1308
BssMI GATC 8 cut(s) 109, 349, 520, 685, 1416, 1584, 1591, 1850
BssSI CACGAG 1 cut(s) 453
BssT1I CCWWGG 1 cut(s) 1308
Bst2BI CACGAG 1 cut(s) 453
Bst4CI ACNGT 6 cut(s) 131, 260, 268, 752, 997, 1559
Bst6I CTCTTC 2 cut(s) 31, 600
BstAPI GCANNNNNTGC 3 cut(s) 539, 551, 1475
BstAUI TGTACA 1 cut(s) 644
BstC8I GCNNGC 6 cut(s) 157, 330, 430, 531, 556, 1626
BstDEI CTNAG 6 cut(s) 899, 964, 1077, 1140, 1280, 1840
BstF5I GGATG 2 cut(s) 1384, 1655
BstFNI CGCG 2 cut(s) 479, 1116
BstHHI GCGC 2 cut(s) 481, 951
BstKTI GATC 8 cut(s) 112, 352, 523, 688, 1419, 1587, 1594, 1853
BstMBI GATC 8 cut(s) 109, 349, 520, 685, 1416, 1584, 1591, 1850
BstMCI CGRYCG 1 cut(s) 477
BstMWI GCNNNNNNNGC 7 cut(s) 539, 551, 929, 1301, 1310, 1475, 1637
BstNSI RCATGY 3 cut(s) 539, 1034, 1628
BstSFI CTRYAG 7 cut(s) 81, 221, 372, 423, 543, 1235, 1348
BstSLI GKGCMC 1 cut(s) 200
BstUI CGCG 2 cut(s) 479, 1116
BstV1I GCAGC 9 cut(s) 207, 437, 529, 907, 929, 1325, 1334, 1534, 1615
BstX2I RGATCY 2 cut(s) 109, 1591
BstXI CCANNNNNNTGG 1 cut(s) 1375
BstYI RGATCY 2 cut(s) 109, 1591
BstZI CGGCCG 1 cut(s) 474
BsuI GTATCC 2 cut(s) 686, 843
BsuRI GGCC 4 cut(s) 198, 476, 1810, 1860
BtsCI GGATG 2 cut(s) 1384, 1655
BtsI GCAGTG 3 cut(s) 50, 576, 825
BtsIMutI CAGTG 6 cut(s) 50, 402, 576, 714, 825, 1164
BtuMI TCGCGA 1 cut(s) 1116
BveI ACCTGC 3 cut(s) 1228, 1469, 1794
Cac8I GCNNGC 6 cut(s) 157, 330, 430, 531, 556, 1626
CaiI CAGNNNCTG 1 cut(s) 1847
CciI TCATGA 1 cut(s) 523
CciNI GCGGCCGC 1 cut(s) 474
CfoI GCGC 2 cut(s) 481, 951
Cfr13I GGNCC 5 cut(s) 196, 197, 236, 292, 1567
CseI GACGC 1 cut(s) 1670
Csp6I GTAC 3 cut(s) 74, 645, 1053
CviAII CATG 8 cut(s) 166, 392, 524, 536, 1031, 1588, 1625, 1831
CviQI GTAC 3 cut(s) 74, 645, 1053
DdeI CTNAG 6 cut(s) 899, 964, 1077, 1140, 1280, 1840
DpnI GATC 8 cut(s) 111, 351, 522, 687, 1418, 1586, 1593, 1852
DpnII GATC 8 cut(s) 109, 349, 520, 685, 1416, 1584, 1591, 1850
DraI TTTAAA 1 cut(s) 802
EaeI YGGCCR 1 cut(s) 474
EagI CGGCCG 1 cut(s) 474
Eam1104I CTCTTC 2 cut(s) 31, 600
EarI CTCTTC 2 cut(s) 31, 600
EclXI CGGCCG 1 cut(s) 474
Eco130I CCWWGG 1 cut(s) 1308
Eco24I GRGCYC 1 cut(s) 200
Eco47I GGWCC 3 cut(s) 236, 292, 1567
Eco52I CGGCCG 1 cut(s) 474
Eco57I CTGAAG 3 cut(s) 54, 426, 1188
EcoO109I RGGNCCY 2 cut(s) 292, 1567
EcoT14I CCWWGG 1 cut(s) 1308
EcoT38I GRGCYC 1 cut(s) 200
ErhI CCWWGG 1 cut(s) 1308
FaeI CATG 8 cut(s) 169, 395, 527, 539, 1034, 1591, 1628, 1834
FalI AAGNNNNNCTT 2 cut(s) 52, 84
FatI CATG 8 cut(s) 165, 391, 523, 535, 1030, 1587, 1624, 1830
FblI GTMKAC 2 cut(s) 768, 1674
FokI GGATG 2 cut(s) 1391, 1642
FriOI GRGCYC 1 cut(s) 200
FspBI CTAG 2 cut(s) 875, 1025
GlaI GCGC 2 cut(s) 480, 950
GsaI CCCAGC 1 cut(s) 1584
GsuI CTGGAG 3 cut(s) 378, 864, 1008
HaeIII GGCC 4 cut(s) 198, 476, 1810, 1860
HgaI GACGC 1 cut(s) 1670
HhaI GCGC 2 cut(s) 481, 951
Hin1II CATG 8 cut(s) 169, 395, 527, 539, 1034, 1591, 1628, 1834
Hin6I GCGC 2 cut(s) 479, 949
HinP1I GCGC 2 cut(s) 479, 949
HincII GTYRAC 2 cut(s) 769, 1675
HindII GTYRAC 2 cut(s) 769, 1675
HindIII AAGCTT 2 cut(s) 146, 1151
HinfI GANTC 3 cut(s) 1082, 1284, 1510
HphI GGTGA 5 cut(s) 31, 272, 334, 853, 956
Hpy166II GTNNAC 4 cut(s) 88, 163, 769, 1675
Hpy188I TCNGA 6 cut(s) 490, 902, 1143, 1421, 1653, 1660
Hpy188III TCNNGA 5 cut(s) 507, 524, 982, 1115, 1435
Hpy8I GTNNAC 4 cut(s) 88, 163, 769, 1675
Hpy99I CGWCG 2 cut(s) 131, 1664
HpyCH4III ACNGT 6 cut(s) 131, 260, 268, 752, 997, 1559
HpyCH4IV ACGT 1 cut(s) 191
HpyF10VI GCNNNNNNNGC 7 cut(s) 539, 551, 929, 1301, 1310, 1475, 1637
HpyF3I CTNAG 6 cut(s) 899, 964, 1077, 1140, 1280, 1840
HpySE526I ACGT 1 cut(s) 191
Hsp92II CATG 8 cut(s) 169, 395, 527, 539, 1034, 1591, 1628, 1834
HspAI GCGC 2 cut(s) 479, 949
Kzo9I GATC 8 cut(s) 109, 349, 520, 685, 1416, 1584, 1591, 1850
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 5 cut(s) 883, 937, 1244, 1421, 1621
Lsp1109I GCAGC 9 cut(s) 207, 437, 529, 907, 929, 1325, 1334, 1534, 1615
LweI GCATC 3 cut(s) 580, 1282, 1640
MaeI CTAG 2 cut(s) 875, 1025
MaeII ACGT 1 cut(s) 191
MaeIII GTNAC 7 cut(s) 187, 418, 622, 712, 756, 1096, 1559
MalI GATC 8 cut(s) 111, 351, 522, 687, 1418, 1586, 1593, 1852
MboI GATC 8 cut(s) 109, 349, 520, 685, 1416, 1584, 1591, 1850
MfeI CAATTG 1 cut(s) 1317
MflI RGATCY 2 cut(s) 109, 1591
MhlI GDGCHC 2 cut(s) 200, 1249
MmeI TCCRAC 4 cut(s) 38, 267, 289, 1683
MroXI GAANNNNTTC 1 cut(s) 1176
MslI CAYNNNNRTG 1 cut(s) 1829
MspA1I CMGCKG 3 cut(s) 377, 428, 920
MunI CAATTG 1 cut(s) 1317
Mva1269I GAATGC 5 cut(s) 681, 1306, 1713, 1746, 1779
MvnI CGCG 2 cut(s) 479, 1116
MwoI GCNNNNNNNGC 7 cut(s) 539, 551, 929, 1301, 1310, 1475, 1637
NdeII GATC 8 cut(s) 109, 349, 520, 685, 1416, 1584, 1591, 1850
NlaIII CATG 8 cut(s) 169, 395, 527, 539, 1034, 1591, 1628, 1834
NlaIV GGNNCC 5 cut(s) 198, 294, 367, 994, 1593
NmuCI GTSAC 1 cut(s) 712
NotI GCGGCCGC 1 cut(s) 474
NruI TCGCGA 1 cut(s) 1116
NspI RCATGY 3 cut(s) 539, 1034, 1628
PaeI GCATGC 1 cut(s) 1628
PagI TCATGA 1 cut(s) 523
PaqCI CACCTGC 1 cut(s) 1469
PciI ACATGT 1 cut(s) 535
PciSI GCTCTTC 1 cut(s) 600
PctI GAATGC 5 cut(s) 681, 1306, 1713, 1746, 1779
PdmI GAANNNNTTC 1 cut(s) 1176
PfeI GAWTC 3 cut(s) 1082, 1284, 1510
PpuMI RGGWCCY 2 cut(s) 292, 1567
PscI ACATGT 1 cut(s) 535
Psp5II RGGWCCY 2 cut(s) 292, 1567
PspFI CCCAGC 1 cut(s) 1580
PspN4I GGNNCC 5 cut(s) 198, 294, 367, 994, 1593
PspOMI GGGCCC 1 cut(s) 196
PspPI GGNCC 5 cut(s) 196, 197, 236, 292, 1567
PspPPI RGGWCCY 2 cut(s) 292, 1567
PstI CTGCAG 6 cut(s) 85, 225, 427, 547, 1239, 1352
PstNI CAGNNNCTG 1 cut(s) 1847
PsuI RGATCY 2 cut(s) 109, 1591
PvuII CAGCTG 3 cut(s) 377, 428, 920
RruI TCGCGA 1 cut(s) 1116
RsaI GTAC 3 cut(s) 75, 646, 1054
RsaNI GTAC 3 cut(s) 74, 645, 1053
RseI CAYNNNNRTG 1 cut(s) 1829
SalI GTCGAC 2 cut(s) 767, 1673
SapI GCTCTTC 1 cut(s) 600
Sau3AI GATC 8 cut(s) 109, 349, 520, 685, 1416, 1584, 1591, 1850
Sau96I GGNCC 5 cut(s) 196, 197, 236, 292, 1567
SduI GDGCHC 2 cut(s) 200, 1249
SfaNI GCATC 3 cut(s) 580, 1282, 1640
SfcI CTRYAG 7 cut(s) 81, 221, 372, 423, 543, 1235, 1348
SinI GGWCC 3 cut(s) 236, 292, 1567
SmiMI CAYNNNNRTG 1 cut(s) 1829
SphI GCATGC 1 cut(s) 1628
SsiI CCGC 2 cut(s) 473, 477
SspI AATATT 2 cut(s) 1528, 1762
SspMI CTAG 2 cut(s) 875, 1025
StyI CCWWGG 1 cut(s) 1308
TaaI ACNGT 6 cut(s) 131, 260, 268, 752, 997, 1559
TaiI ACGT 1 cut(s) 194
TaqI TCGA 3 cut(s) 768, 1287, 1674
TatI WGTACW 1 cut(s) 644
TauI GCSGC 2 cut(s) 476, 479
TfiI GAWTC 3 cut(s) 1082, 1284, 1510
TscAI CASTG 6 cut(s) 57, 409, 576, 721, 825, 1171
TseFI GTSAC 1 cut(s) 712
TseI GCWGC 9 cut(s) 220, 425, 542, 917, 920, 1313, 1347, 1547, 1628
Tsp45I GTSAC 1 cut(s) 712
TspDTI ATGAA 3 cut(s) 1212, 1419, 1589
TspRI CASTG 6 cut(s) 57, 409, 576, 721, 825, 1171
VpaK11BI GGWCC 3 cut(s) 236, 292, 1567
XapI RAATTY 1 cut(s) 1175
XceI RCATGY 3 cut(s) 539, 1034, 1628
XmiI GTMKAC 2 cut(s) 768, 1674
XmnI GAANNNNTTC 1 cut(s) 1176
XspI CTAG 2 cut(s) 875, 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.