Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0009003

Physical Location & Seq

Genomic Coordinates Reverse (-)

58454432 .. 58459400

Gene Structure 4969 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00377930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGCAACCCTTGGCATATAATAGCGCCAAAATAACGTCCAAGATTTTTTTGCTCTCTTATCCTCAAAAAGTCCAGAACTTCACAAGTTCAAAGTTATCTCCAACTCCAAGCTTCAATGAGATTTACAAATCCTGCATTCAAATTCATGTTCACCAACTGAACAGAATCACCATGGCATGTTCTCCAACTCCCATCTCTGCACTTTCTTCCACCAACCCAACACTGCTGCCCAAAAGGCCTTCTTCACCTTTTACCACTGCAAATCCAAAAGGCATACCCAAAGACCTCTACTTTAACCATGATGGTTCTGCCACAACGAAGCTTCTGGCAGGGGTGAGCATGGTGGCAGAGCTGGTTGGGGTTACATTGGGTCCAAAGGGAAGGAATGTGGTGCTGCAGAATAAGTATGGACCTCCCAAGATTGTCAATGATGGTGAAACTGTTCTCAAAGAGATCGAGTTGGAGGACTCTGTGGAGAATGTCGGAGTTAAACTGTTAAGGCAAGCTGGAGCAAAAACAAATGACCTGGCCGGAGATGGTTCCACTACAGCTGTAATTCTTGCTCATGGTTTAATTACTGAAGGTGTGAAGGTTACAGCAGCTGGCATGAATCCCATTCAAATTGCTCGTGGGATCGAGAAGACTGCAGTGGCCCTAGTTTCTGAACTCAAATTGATGTCCAGAGAGATTGAGGATCATCAACTTGCAGATGTTGCTGCAGTTAGTGCAGGCAATGATTATACAGTGGGGAACATGATTTACAATGCTCTTTGTCAAGTAGGAAAGAAGGGTGTAATTACTATTGAAAAAGGGAAGTCTACGGAAAACACTCTTCAAATTGTAGAAGGAATGAAGTTTGATCGTGGATACTTATCTCCTTACTTTGTCACTGATCGACAAAAAATGATAGTGGAGTTTCAAGAGTGTAAGTTGCTTTTGGTTGACAAAAAAATTACACACCCGGAGGAGCTGTTTAAGATATTGGACAATGCAGTGAAAGAGAAGTATCCAATTGTGATAGTTGCCGAGGGAATTGAGCAGGAAGCTTTAACTCCAGTAATAAGAAACAAGCTCAGAGGTGCACTGAAAGCAGTCGCCATTAAGGCGCCTGCCTTCGGTGAACGCAAAAGCCACTACTTAGACGACATTGCCATTTTGACCGGAGCAACAGTTGTAAGAGAAGAGATGGGAATGGTTTTACATAAGACTGGCCCGGAGGTATTGGGGACTGCTACTAAGGTTGTGATAACAAAGGACTCTACACTGATAGTTACTGATGGAAGCACTCGAGAAGCTGTTGACAAGAGGGTTTCTCAGATACAAAGGCTTGTTGAGAACACTAAAGAAGAATTTCAAAAGAAGATATTAAATGAAAGAATAGGAAGATTATCAGGGGGGATTGCTATTCTGCAGGTAGGAGCACAAACGCAAGTTGAGTTGAAGGATAAACAACTCAGAATTGAAGATGCTTTGAATGCAACCAAGGCAGCAATTGAGGAAGGTGTTGTAGTTGGTGGTGGCTGCTGCCTTTTGAGGCTCTCTAAAAAGGTGGATGCCATCAAAGAACTTTTGGAAAATGAAGAACAGAAGATTGGAGCGGAAATATTCAAGAAAGCTCTAAGCTATCCTGCAAAACTGATAGCTAAAAATGCAGGTGTAAATGGCAGTGTTGTAGTAGAGAAGGTTCTATCAAATGCTGATATGGGGTACGGATATAATGCTGCAAGAGACTGTTATGAGGACCTAATGAAAGCTGGGATTATGGATCCATCAAAGGTTGTTAGATGTTGTTTGGAGCATGCTGCATCAGTCGCAAAAACTTTTCTGTTGTCTGATGCTGTTGTCGTCGAGATTAAGGAATTGAATCCCATCCCAAGAAGAATGCCAAGGCGAAGGCCAAAGCCACCCCTTCCCCCCATGCCCCAAATGCCACAGATGCCACAAATGCCGCCAATGTCACCCATGCCACCAATGTCCATGCCAACCTCAGGTGCTCGATCATTTGGTTCCAACATCCAGGGCATTTTGGATTTGGTGGTGGCAGGTGTTTCTCTCATGATTGGTCTGAGCGTCTTCGCTTTCATTGCCTCTGTTCTCTGCTCTGCTGCTTTCTTGTACAGCGCCAAGGGTGCATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006457 GO:0006458 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044183 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051082 GO:0061077

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

712

Amino Acids

77.0

Weight (kDa)

9.01

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	115 - 617	1.9e-82	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009003)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26230 AT1G26230 AT1G26230 AT1G26230 AT1G26230
fragaria_vesca	FvH4_4g28740 FvH4_4g28740
malus_domestica	MD13G1053600.v1.1
prunus_persica	Prupe.1G298500_v2.0.a1 Prupe.1G298500_v2.0.a1
pyrus_communis	pycom13g04780
rosa_chinensis	RchiOBHm_Chr4g0436871
rosa_laevigata	RLG00000006490
rosa_multiflora	Rmu_ssc0000493.1_g000001
rosa_roxburghii	Rroxscaffold_5G00377930
rosa_rugosa	Rorug04G0296700 Rorug04G0296800
rosa_samantha	Rh4AG351100 Rh4BG360100 Rh4CG374400 Rh4DG354200
rosa_wichuraiana	Rw4G030740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1643, 2033
Acc36I	ACCTGC	3 cut(s)	1402, 1643, 2033
AccB1I	GGYRCC	1 cut(s)	1105
AccBSI	CCGCTC	1 cut(s)	1598
AccI	GTMKAC	1 cut(s)	818
AciI	CCGC	2 cut(s)	1598, 1949
AclWI	GGATC	4 cut(s)	641, 702, 1760, 1773
AcoI	YGGCCR	1 cut(s)	528
AcsI	RAATTY	2 cut(s)	141, 1349
AcuI	CTGAAG	1 cut(s)	600
AcyI	GRCGYC	1 cut(s)	1106
AfaI	GTAC	2 cut(s)	1709, 2117
AfiI	CCNNNNNNNGG	2 cut(s)	1115, 1988
AjnI	CCWGG	2 cut(s)	525, 2016
AjuI	GAANNNNNNNTTGG	2 cut(s)	1575, 1607
Alw21I	GWGCWC	3 cut(s)	1084, 1423, 1996
Alw26I	GTCTC	1 cut(s)	1722
Alw44I	GTGCAC	1 cut(s)	1080
AlwI	GGATC	4 cut(s)	641, 702, 1760, 1773
AlwNI	CAGNNNCTG	1 cut(s)	602
Ama87I	CYCGRG	1 cut(s)	1287
AoxI	GGCC	5 cut(s)	236, 528, 651, 1210, 1895
ApaLI	GTGCAC	1 cut(s)	1080
ApoI	RAATTY	2 cut(s)	141, 1349
Asp700I	GAANNNNTTC	2 cut(s)	441, 1350
AspLEI	GCGC	3 cut(s)	26, 1108, 2123
AspS9I	GGNCC	5 cut(s)	371, 410, 652, 1211, 1741
AsuC2I	CCSGG	2 cut(s)	962, 1214
AsuHPI	GGTGA	7 cut(s)	143, 160, 237, 346, 446, 1130, 1950
AvaI	CYCGRG	1 cut(s)	1287
AvaII	GGWCC	3 cut(s)	371, 410, 1741
AxyI	CCTNAGG	1 cut(s)	1987
BaeGI	GKGCMC	1 cut(s)	1084
BamHI	GGATCC	1 cut(s)	1765
BanI	GGYRCC	1 cut(s)	1105
BauI	CACGAG	1 cut(s)	627
BbsI	GAAGAC	2 cut(s)	647, 2065
Bbv12I	GWGCWC	3 cut(s)	1084, 1423, 1996
BccI	CCATC	9 cut(s)	200, 296, 425, 530, 1180, 1271, 1565, 1777, 1877
BcgI	CGANNNNNNTGC	2 cut(s)	626, 660
BciT130I	CCWGG	2 cut(s)	527, 2018
BciVI	GTATCC	2 cut(s)	860, 1017
BcnI	CCSGG	2 cut(s)	962, 1214
BcoDI	GTCTC	1 cut(s)	1722
BfaI	CTAG	1 cut(s)	656
BfmI	CTRYAG	5 cut(s)	395, 546, 645, 717, 1409
BfoI	RGCGCY	3 cut(s)	27, 1109, 2124
BfuAI	ACCTGC	3 cut(s)	1402, 1643, 2033
BfuI	GTATCC	2 cut(s)	860, 1017
BglI	GCCNNNNNGGC	2 cut(s)	235, 1103
Bme1390I	CCNGG	4 cut(s)	527, 962, 1214, 2018
Bme18I	GGWCC	3 cut(s)	371, 410, 1741
BmeT110I	CYCGRG	1 cut(s)	1287
BmgT120I	GGNCC	5 cut(s)	371, 410, 652, 1211, 1741
BmiI	GGNNCC	5 cut(s)	372, 541, 1107, 1767, 2008
BmrFI	CCNGG	4 cut(s)	527, 962, 1214, 2018
BmsI	GCATC	5 cut(s)	1456, 1543, 1814, 1825, 1926
BpiI	GAAGAC	2 cut(s)	647, 2065
BplI	GAGNNNNNCTC	2 cut(s)	1297, 1329
BpmI	CTGGAG	2 cut(s)	528, 1038
BpuMI	CCSGG	2 cut(s)	962, 1214
BsaBI	GATNNNNATC	1 cut(s)	871
BsaHI	GRCGYC	1 cut(s)	1106
BsaJI	CCNNGG	7 cut(s)	9, 171, 1026, 1482, 1886, 2017, 2124
BsaWI	WCCGGW	1 cut(s)	1160
BsaXI	ACNNNNNCTCC	4 cut(s)	956, 986, 1155, 1185
Bsc4I	CCNNNNNNNGG	2 cut(s)	1115, 1988
Bse1I	ACTGG	2 cut(s)	1055, 1213
Bse21I	CCTNAGG	1 cut(s)	1987
Bse3DI	GCAATG	3 cut(s)	739, 1146, 2082
Bse8I	GATNNNNATC	1 cut(s)	871
BseBI	CCWGG	2 cut(s)	527, 2018
BseDI	CCNNGG	7 cut(s)	9, 171, 1026, 1482, 1886, 2017, 2124
BseGI	GGATG	3 cut(s)	1558, 1869, 2013
BseJI	GATNNNNATC	1 cut(s)	871
BseLI	CCNNNNNNNGG	2 cut(s)	1115, 1988
BseMI	GCAATG	3 cut(s)	739, 1146, 2082
BseMII	CTCAG	5 cut(s)	1087, 1328, 1468, 2001, 2057
BseNI	ACTGG	2 cut(s)	1055, 1213
BseRI	GAGGAG	1 cut(s)	980
BseSI	GKGCMC	1 cut(s)	1084
BseYI	CCCAGC	1 cut(s)	1754
BsgI	GTGCAG	2 cut(s)	183, 747
BshFI	GGCC	5 cut(s)	238, 530, 653, 1212, 1897
BshNI	GGYRCC	1 cut(s)	1105
BsiHKAI	GWGCWC	3 cut(s)	1084, 1423, 1996
BsiHKCI	CYCGRG	1 cut(s)	1287
BsiSI	CCGG	4 cut(s)	531, 962, 1161, 1214
BslFI	GGGAC	1 cut(s)	1240
BslI	CCNNNNNNNGG	2 cut(s)	1115, 1988
BsmAI	GTCTC	1 cut(s)	1722
BsmFI	GGGAC	1 cut(s)	1240
BsmI	GAATGC	3 cut(s)	135, 1480, 1887
BsnI	GGCC	5 cut(s)	238, 530, 653, 1212, 1897
BsoBI	CYCGRG	1 cut(s)	1287
Bsp1286I	GDGCHC	3 cut(s)	1084, 1423, 1996
Bsp1407I	TGTACA	1 cut(s)	2115
Bsp143I	GATC	7 cut(s)	453, 633, 694, 859, 892, 1765, 1997
Bsp19I	CCATGG	1 cut(s)	171
BspACI	CCGC	2 cut(s)	1598, 1949
BspANI	GGCC	5 cut(s)	238, 530, 653, 1212, 1897
BspCNI	CTCAG	5 cut(s)	1086, 1327, 1467, 2000, 2058
BspHI	TCATGA	1 cut(s)	2055
BspLI	GGNNCC	5 cut(s)	372, 541, 1107, 1767, 2008
BspMAI	CTGCAG	4 cut(s)	399, 649, 721, 1413
BspMI	ACCTGC	3 cut(s)	1402, 1643, 2033
BspPI	GGATC	4 cut(s)	641, 702, 1760, 1773
BspT107I	GGYRCC	1 cut(s)	1105
BsrBI	CCGCTC	1 cut(s)	1598
BsrDI	GCAATG	3 cut(s)	739, 1146, 2082
BsrGI	TGTACA	1 cut(s)	2115
BsrI	ACTGG	2 cut(s)	1055, 1213
BssECI	CCNNGG	7 cut(s)	9, 171, 1026, 1482, 1886, 2017, 2124
BssMI	GATC	7 cut(s)	453, 633, 694, 859, 892, 1765, 1997
BssNI	GRCGYC	1 cut(s)	1106
BssSI	CACGAG	1 cut(s)	627
BssT1I	CCWWGG	5 cut(s)	9, 171, 1482, 1886, 2124
Bst2BI	CACGAG	1 cut(s)	627
Bst2UI	CCWGG	2 cut(s)	527, 2018
Bst4CI	ACNGT	5 cut(s)	442, 495, 745, 1171, 1733
Bst6I	CTCTTC	2 cut(s)	837, 1176
BstACI	GRCGYC	1 cut(s)	1106
BstAPI	GCANNNNNTGC	2 cut(s)	713, 725
BstAUI	TGTACA	1 cut(s)	2115
BstC8I	GCNNGC	5 cut(s)	504, 604, 730, 1110, 1800
BstDEI	CTNAG	8 cut(s)	1073, 1138, 1236, 1314, 1454, 1619, 1987, 2066
BstDSI	CCRYGG	1 cut(s)	171
BstF5I	GGATG	3 cut(s)	1558, 1869, 2013
BstH2I	RGCGCY	3 cut(s)	27, 1109, 2124
BstHHI	GCGC	3 cut(s)	26, 1108, 2123
BstKTI	GATC	7 cut(s)	456, 636, 697, 862, 895, 1768, 2000
BstMAI	GTCTC	1 cut(s)	1722
BstMBI	GATC	7 cut(s)	453, 633, 694, 859, 892, 1765, 1997
BstNI	CCWGG	2 cut(s)	527, 2018
BstNSI	RCATGY	2 cut(s)	180, 1802
BstSCI	CCNGG	4 cut(s)	525, 960, 1212, 2016
BstSFI	CTRYAG	5 cut(s)	395, 546, 645, 717, 1409
BstSLI	GKGCMC	1 cut(s)	1084
BstV2I	GAAGAC	2 cut(s)	647, 2065
BstX2I	RGATCY	1 cut(s)	1765
BstYI	RGATCY	1 cut(s)	1765
Bsu36I	CCTNAGG	1 cut(s)	1987
BsuI	GTATCC	2 cut(s)	860, 1017
BsuRI	GGCC	5 cut(s)	238, 530, 653, 1212, 1897
BtgI	CCRYGG	1 cut(s)	171
BtsCI	GGATG	3 cut(s)	1558, 1869, 2013
BtsI	GCAGTG	5 cut(s)	221, 255, 654, 999, 1672
BtsIMutI	CAGTG	9 cut(s)	221, 255, 654, 750, 888, 999, 1082, 1262, 1672
BveI	ACCTGC	3 cut(s)	1402, 1643, 2033
Cac8I	GCNNGC	5 cut(s)	504, 604, 730, 1110, 1800
CaiI	CAGNNNCTG	1 cut(s)	602
CciI	TCATGA	1 cut(s)	2055
CfoI	GCGC	3 cut(s)	26, 1108, 2123
Cfr13I	GGNCC	5 cut(s)	371, 410, 652, 1211, 1741
CseI	GACGC	1 cut(s)	2059
Csp6I	GTAC	2 cut(s)	1708, 2116
CviQI	GTAC	2 cut(s)	1708, 2116
DdeI	CTNAG	8 cut(s)	1073, 1138, 1236, 1314, 1454, 1619, 1987, 2066
DinI	GGCGCC	1 cut(s)	1107
DpnI	GATC	7 cut(s)	455, 635, 696, 861, 894, 1767, 1999
DpnII	GATC	7 cut(s)	453, 633, 694, 859, 892, 1765, 1997
EaeI	YGGCCR	1 cut(s)	528
Eam1104I	CTCTTC	2 cut(s)	837, 1176
EarI	CTCTTC	2 cut(s)	837, 1176
Eco130I	CCWWGG	5 cut(s)	9, 171, 1482, 1886, 2124
Eco147I	AGGCCT	1 cut(s)	238
Eco47I	GGWCC	3 cut(s)	371, 410, 1741
Eco57I	CTGAAG	1 cut(s)	600
Eco81I	CCTNAGG	1 cut(s)	1987
Eco88I	CYCGRG	1 cut(s)	1287
EcoO109I	RGGNCCY	1 cut(s)	1741
EcoRII	CCWGG	2 cut(s)	525, 2016
EcoT14I	CCWWGG	5 cut(s)	9, 171, 1482, 1886, 2124
EgeI	GGCGCC	1 cut(s)	1107
EheI	GGCGCC	1 cut(s)	1107
ErhI	CCWWGG	5 cut(s)	9, 171, 1482, 1886, 2124
FalI	AAGNNNNNCTT	2 cut(s)	226, 258
FaqI	GGGAC	1 cut(s)	1240
FblI	GTMKAC	1 cut(s)	818
FokI	GGATG	3 cut(s)	1565, 1856, 2000
FspBI	CTAG	1 cut(s)	656
GlaI	GCGC	3 cut(s)	25, 1107, 2122
GsaI	CCCAGC	1 cut(s)	1758
GsuI	CTGGAG	2 cut(s)	528, 1038
HaeII	RGCGCY	3 cut(s)	27, 1109, 2124
HaeIII	GGCC	5 cut(s)	238, 530, 653, 1212, 1897
HapII	CCGG	4 cut(s)	531, 962, 1161, 1214
HgaI	GACGC	1 cut(s)	2059
HhaI	GCGC	3 cut(s)	26, 1108, 2123
Hin1I	GRCGYC	1 cut(s)	1106
Hin6I	GCGC	3 cut(s)	24, 1106, 2121
HinP1I	GCGC	3 cut(s)	24, 1106, 2121
HincII	GTYRAC	2 cut(s)	943, 1300
HindII	GTYRAC	2 cut(s)	943, 1300
HindIII	AAGCTT	3 cut(s)	109, 320, 1044
HinfI	GANTC	5 cut(s)	165, 467, 610, 1256, 1864
HpaII	CCGG	4 cut(s)	531, 962, 1161, 1214
HphI	GGTGA	7 cut(s)	143, 160, 237, 346, 446, 1130, 1950
Hpy166II	GTNNAC	6 cut(s)	151, 819, 943, 1082, 1121, 1300
Hpy188I	TCNGA	7 cut(s)	485, 664, 1076, 1317, 1457, 1834, 2067
Hpy188III	TCNNGA	9 cut(s)	73, 637, 681, 920, 1289, 1609, 1849, 2056, 2136
Hpy8I	GTNNAC	6 cut(s)	151, 819, 943, 1082, 1121, 1300
Hpy99I	CGWCG	1 cut(s)	1850
HpyCH4III	ACNGT	5 cut(s)	442, 495, 745, 1171, 1733
HpyCH4IV	ACGT	1 cut(s)	35
HpyF3I	CTNAG	8 cut(s)	1073, 1138, 1236, 1314, 1454, 1619, 1987, 2066
HpySE526I	ACGT	1 cut(s)	35
Hsp92I	GRCGYC	1 cut(s)	1106
HspAI	GCGC	3 cut(s)	24, 1106, 2121
KasI	GGCGCC	1 cut(s)	1105
Kzo9I	GATC	7 cut(s)	453, 633, 694, 859, 892, 1765, 1997
LmnI	GCTCC	6 cut(s)	509, 967, 1163, 1418, 1595, 1795
LweI	GCATC	5 cut(s)	1456, 1543, 1814, 1825, 1926
MaeI	CTAG	1 cut(s)	656
MaeII	ACGT	1 cut(s)	35
MaeIII	GTNAC	5 cut(s)	361, 592, 886, 1270, 1956
MalI	GATC	7 cut(s)	455, 635, 696, 861, 894, 1767, 1999
MbiI	CCGCTC	1 cut(s)	1598
MboI	GATC	7 cut(s)	453, 633, 694, 859, 892, 1765, 1997
MfeI	CAATTG	2 cut(s)	1011, 1491
MflI	RGATCY	1 cut(s)	1765
MhlI	GDGCHC	3 cut(s)	1084, 1423, 1996
Mly113I	GGCGCC	1 cut(s)	1106
MlyI	GAGTC	2 cut(s)	461, 1250
MmeI	TCCRAC	5 cut(s)	125, 209, 441, 463, 2034
MroXI	GAANNNNTTC	2 cut(s)	441, 1350
MseI	TTAA	9 cut(s)	294, 489, 497, 572, 975, 1049, 1101, 1367, 1854
MspA1I	CMGCKG	2 cut(s)	551, 602
MspI	CCGG	4 cut(s)	531, 962, 1161, 1214
MspR9I	CCNGG	4 cut(s)	527, 962, 1214, 2018
MunI	CAATTG	2 cut(s)	1011, 1491
Mva1269I	GAATGC	3 cut(s)	135, 1480, 1887
MvaI	CCWGG	2 cut(s)	527, 2018
NarI	GGCGCC	1 cut(s)	1106
NciI	CCSGG	2 cut(s)	962, 1214
NcoI	CCATGG	1 cut(s)	171
NdeII	GATC	7 cut(s)	453, 633, 694, 859, 892, 1765, 1997
NlaIV	GGNNCC	5 cut(s)	372, 541, 1107, 1767, 2008
NmeAIII	GCCGAG	1 cut(s)	1051
NmuCI	GTSAC	2 cut(s)	886, 1956
NspI	RCATGY	2 cut(s)	180, 1802
PaeI	GCATGC	1 cut(s)	1802
PaeR7I	CTCGAG	1 cut(s)	1287
PagI	TCATGA	1 cut(s)	2055
PaqCI	CACCTGC	2 cut(s)	1643, 2033
PceI	AGGCCT	1 cut(s)	238
PctI	GAATGC	3 cut(s)	135, 1480, 1887
PdmI	GAANNNNTTC	2 cut(s)	441, 1350
PfeI	GAWTC	3 cut(s)	165, 610, 1864
PleI	GAGTC	2 cut(s)	461, 1250
PluTI	GGCGCC	1 cut(s)	1109
PpsI	GAGTC	2 cut(s)	461, 1250
PpuMI	RGGWCCY	1 cut(s)	1741
Psp5II	RGGWCCY	1 cut(s)	1741
Psp6I	CCWGG	2 cut(s)	525, 2016
PspFI	CCCAGC	1 cut(s)	1754
PspGI	CCWGG	2 cut(s)	525, 2016
PspN4I	GGNNCC	5 cut(s)	372, 541, 1107, 1767, 2008
PspPI	GGNCC	5 cut(s)	371, 410, 652, 1211, 1741
PspPPI	RGGWCCY	1 cut(s)	1741
PsrI	GAACNNNNNNTAC	4 cut(s)	743, 775, 1668, 1700
PstI	CTGCAG	4 cut(s)	399, 649, 721, 1413
PstNI	CAGNNNCTG	1 cut(s)	602
PsuI	RGATCY	1 cut(s)	1765
PvuII	CAGCTG	2 cut(s)	551, 602
RsaI	GTAC	2 cut(s)	1709, 2117
RsaNI	GTAC	2 cut(s)	1708, 2116
SaqAI	TTAA	9 cut(s)	294, 489, 497, 572, 975, 1049, 1101, 1367, 1854
Sau3AI	GATC	7 cut(s)	453, 633, 694, 859, 892, 1765, 1997
Sau96I	GGNCC	5 cut(s)	371, 410, 652, 1211, 1741
SchI	GAGTC	2 cut(s)	461, 1250
ScrFI	CCNGG	4 cut(s)	527, 962, 1214, 2018
SduI	GDGCHC	3 cut(s)	1084, 1423, 1996
SfaNI	GCATC	5 cut(s)	1456, 1543, 1814, 1825, 1926
SfcI	CTRYAG	5 cut(s)	395, 546, 645, 717, 1409
SfoI	GGCGCC	1 cut(s)	1107
Sfr274I	CTCGAG	1 cut(s)	1287
SinI	GGWCC	3 cut(s)	371, 410, 1741
SlaI	CTCGAG	1 cut(s)	1287
SmlI	CTYRAG	1 cut(s)	1287
SmoI	CTYRAG	1 cut(s)	1287
SphI	GCATGC	1 cut(s)	1802
SseBI	AGGCCT	1 cut(s)	238
SsiI	CCGC	2 cut(s)	1598, 1949
SspDI	GGCGCC	1 cut(s)	1105
SspI	AATATT	1 cut(s)	1605
SspMI	CTAG	1 cut(s)	656
StuI	AGGCCT	1 cut(s)	238
StyD4I	CCNGG	4 cut(s)	525, 960, 1212, 2016
StyI	CCWWGG	5 cut(s)	9, 171, 1482, 1886, 2124
TaaI	ACNGT	5 cut(s)	442, 495, 745, 1171, 1733
TaiI	ACGT	1 cut(s)	38
TaqI	TCGA	6 cut(s)	456, 636, 895, 1288, 1848, 1996
TatI	WGTACW	1 cut(s)	2115
TauI	GCSGC	1 cut(s)	1951
TfiI	GAWTC	3 cut(s)	165, 610, 1864
Tru1I	TTAA	9 cut(s)	294, 489, 497, 572, 975, 1049, 1101, 1367, 1854
Tru9I	TTAA	9 cut(s)	294, 489, 497, 572, 975, 1049, 1101, 1367, 1854
TscAI	CASTG	9 cut(s)	228, 262, 654, 750, 895, 999, 1089, 1269, 1672
TseFI	GTSAC	2 cut(s)	886, 1956
Tsp45I	GTSAC	2 cut(s)	886, 1956
TspDTI	ATGAA	7 cut(s)	134, 623, 866, 1386, 1593, 1763, 2071
TspGWI	ACGGA	2 cut(s)	836, 1725
TspRI	CASTG	9 cut(s)	228, 262, 654, 750, 895, 999, 1089, 1269, 1672
VneI	GTGCAC	1 cut(s)	1080
VpaK11BI	GGWCC	3 cut(s)	371, 410, 1741
XapI	RAATTY	2 cut(s)	141, 1349
XceI	RCATGY	2 cut(s)	180, 1802
XhoI	CTCGAG	1 cut(s)	1287
XmiI	GTMKAC	1 cut(s)	818
XmnI	GAANNNNTTC	2 cut(s)	441, 1350
XspI	CTAG	1 cut(s)	656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.