Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0009003

Physical Location & Seq

Genomic Coordinates Reverse (-)

57518488 .. 57520911

Gene Structure 2424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG354200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGAAAAAAAATTCAGCTACCAGCCACCCACATATTTTATTATGCAGATTGAGGATCATGAACTTGCAGATGTTGCTGCAGTTAGTGCAGGCAATGATTATACAGTGGGGAACATGATTTACAATGCTCTTTGTCAAGTAGGAAAGAAGGGTGTAATTACTATTGAAAAAGGGAAGTCTACGGAAAACACTCTTCAAATTGTAGAAGGAATGCAGTTTGATCGTGGATACTTATCTCCTTACTTTGTCACTGACCGACAAAAAATGATAGTGGAGTTTCAAGAGTGTAAGGTAATAACTGTAGGTTATATACAGGCCGACATGTTTTCCTATGAAGTAACTAGAGGCCATGAAATTCTTTGGTTGCAGTTGCTTTTGGTTGACGAAAAAATTACACACCCGGAGGAGCTGTTTAAGATATTGGACAATGCAGTGAAAGAGAAGTATCCAATTGTGATAGTTGCCGAGGGGATTGAGCAGGAAGCTTTAACTCCAGTAATAAGAAACAAGCTCAGAGGTGCACTGAAAGCAGTCGCCATTAAGGCGCCTGCCTTCGGTGAACGCAAAAGCCACTACTTAGACGACATTGCCATTTTGACCGGAGCAACAGTTGTAAGAGAAGAGATGGGAATGATTTTACATAAGACTGGCCCGGAGGTATTGGGGACTGCTACTAAGGTTGTGATAACAAAGGACTCTACACTGATAGTTACTGATGGAAGCACTCGAGAAGCTGTTGACAAGAGGGTTTCTCAGATACAAAGGCTTGTTGAGAACACTAAAGAAGAATTTCAAAAGAAGATATTAAATGAAAGAATAGGAAGATTATCAGGGGGGATTGCTATTCTGCAGGTAGGAGCACAAACGCAAGTTGAGTTGAAGGATAAACAACTCAGAATTGAAGATGCTTTGAATGCAACCAAGGCAGCAATTGAGGAAGGTGTTGTAGTTGGTGGTGGCTGCTGCCTTTTGAGGCTCTCGAAAAAGGTGGATGCCATCAAAGAAGTTTTGGAAAATGAAGAACAGAAGATTGGAGCGGAAATATTCAAGAAAGCTCTAAGCTATCCCGCAAAACTGATAGCTAAAAATGCAGGTGTAAATGGCAGTGTTGTAGTAGAGAAGGTTCTATCAAATGCTGATATGGGGTACGGATATAATGCTGCAAGAGACTGTTATGAGGACCTAATGAAAGCTGGGATTATGGATCCATCAAAGGTTGTTAGATGTTGTTTGGAGCATGCTGCATCAGTCGCAAAAACTTTTCTGTTGTCTGATGCTGTTGTCGTCGAGATTAAGGAATTGAATCCCATCCCAAGAAGAATGCCAAGGCGAAGGCCAAAGCCACCCCTTCCCCCCATGCCCCAAATGCCACAGATGCCGCCAATGCCACCAATGTCCATGCCAACCTCAGGTGCTCGATCATTTGGTTCCAAGTATGGCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006457 GO:0006458 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044183 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051082 GO:0061077

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

481

Amino Acids

53.27

Weight (kDa)

8.26

Isoelectric Point (pI)

39.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	18 - 430	3e-51	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009003)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26230 AT1G26230 AT1G26230 AT1G26230 AT1G26230
fragaria_vesca	FvH4_4g28740 FvH4_4g28740
malus_domestica	MD13G1053600.v1.1
prunus_persica	Prupe.1G298500_v2.0.a1 Prupe.1G298500_v2.0.a1
pyrus_communis	pycom13g04780
rosa_chinensis	RchiOBHm_Chr4g0436871
rosa_laevigata	RLG00000006490
rosa_multiflora	Rmu_ssc0000493.1_g000001
rosa_roxburghii	Rroxscaffold_5G00377930
rosa_rugosa	Rorug04G0296700 Rorug04G0296800
rosa_samantha	Rh4AG351100 Rh4BG360100 Rh4CG374400 Rh4DG354200
rosa_wichuraiana	Rw4G030740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1082
Acc36I	ACCTGC	2 cut(s)	841, 1082
AccB1I	GGYRCC	1 cut(s)	544
AccBSI	CCGCTC	1 cut(s)	1037
AccI	GTMKAC	1 cut(s)	179
AciI	CCGC	3 cut(s)	1037, 1068, 1379
AclWI	GGATC	3 cut(s)	63, 1199, 1212
AcsI	RAATTY	3 cut(s)	11, 354, 788
AcyI	GRCGYC	1 cut(s)	545
AfaI	GTAC	1 cut(s)	1148
AfiI	CCNNNNNNNGG	2 cut(s)	554, 1409
AflIII	ACRYGT	1 cut(s)	321
AgsI	TTSAA	9 cut(s)	167, 197, 281, 794, 880, 902, 913, 1048, 1303
AjuI	GAANNNNNNNTTGG	2 cut(s)	1014, 1046
AluBI	AGCT	9 cut(s)	18, 409, 485, 511, 734, 1055, 1062, 1082, 1193
AluI	AGCT	9 cut(s)	18, 409, 485, 511, 734, 1055, 1062, 1082, 1193
Alw21I	GWGCWC	3 cut(s)	523, 862, 1417
Alw26I	GTCTC	1 cut(s)	1161
Alw44I	GTGCAC	1 cut(s)	519
AlwI	GGATC	3 cut(s)	63, 1199, 1212
Ama87I	CYCGRG	1 cut(s)	726
AoxI	GGCC	4 cut(s)	315, 346, 649, 1334
ApaLI	GTGCAC	1 cut(s)	519
ApeKI	GCWGC	6 cut(s)	77, 926, 960, 963, 1160, 1241
ApoI	RAATTY	3 cut(s)	11, 354, 788
Asp700I	GAANNNNTTC	1 cut(s)	789
AspLEI	GCGC	1 cut(s)	547
AspS9I	GGNCC	2 cut(s)	650, 1180
AsuC2I	CCSGG	2 cut(s)	401, 653
AsuHPI	GGTGA	1 cut(s)	569
AvaI	CYCGRG	1 cut(s)	726
AvaII	GGWCC	1 cut(s)	1180
AxyI	CCTNAGG	1 cut(s)	1408
BaeGI	GKGCMC	1 cut(s)	523
BamHI	GGATCC	1 cut(s)	1204
BanI	GGYRCC	1 cut(s)	544
Bbv12I	GWGCWC	3 cut(s)	523, 862, 1417
BbvI	GCAGC	6 cut(s)	64, 938, 947, 950, 1147, 1228
BccI	CCATC	5 cut(s)	619, 710, 1004, 1216, 1316
BcgI	CGANNNNNNTGC	2 cut(s)	203, 237
BciVI	GTATCC	2 cut(s)	221, 456
BcnI	CCSGG	2 cut(s)	401, 653
BcoDI	GTCTC	1 cut(s)	1161
BfaI	CTAG	1 cut(s)	342
BfmI	CTRYAG	3 cut(s)	78, 300, 848
BfoI	RGCGCY	1 cut(s)	548
BfuAI	ACCTGC	2 cut(s)	841, 1082
BfuI	GTATCC	2 cut(s)	221, 456
BglI	GCCNNNNNGGC	1 cut(s)	542
BisI	GCNGC	7 cut(s)	78, 927, 961, 964, 1161, 1242, 1379
BlsI	GCNGC	7 cut(s)	79, 928, 962, 965, 1162, 1243, 1380
Bme1390I	CCNGG	2 cut(s)	401, 653
Bme18I	GGWCC	1 cut(s)	1180
BmeT110I	CYCGRG	1 cut(s)	726
BmgT120I	GGNCC	2 cut(s)	650, 1180
BmiI	GGNNCC	3 cut(s)	546, 1206, 1429
BmrFI	CCNGG	2 cut(s)	401, 653
BmsI	GCATC	5 cut(s)	895, 982, 1253, 1264, 1365
BplI	GAGNNNNNCTC	2 cut(s)	736, 768
BpmI	CTGGAG	1 cut(s)	477
BpuMI	CCSGG	2 cut(s)	401, 653
BsaBI	GATNNNNATC	1 cut(s)	232
BsaHI	GRCGYC	1 cut(s)	545
BsaJI	CCNNGG	3 cut(s)	465, 921, 1325
BsaWI	WCCGGW	1 cut(s)	599
BsaXI	ACNNNNNCTCC	4 cut(s)	395, 425, 594, 624
Bsc4I	CCNNNNNNNGG	2 cut(s)	554, 1409
Bse1I	ACTGG	2 cut(s)	494, 652
Bse21I	CCTNAGG	1 cut(s)	1408
Bse3DI	GCAATG	2 cut(s)	100, 585
Bse8I	GATNNNNATC	1 cut(s)	232
BseDI	CCNNGG	3 cut(s)	465, 921, 1325
BseGI	GGATG	2 cut(s)	997, 1308
BseJI	GATNNNNATC	1 cut(s)	232
BseLI	CCNNNNNNNGG	2 cut(s)	554, 1409
BseMI	GCAATG	2 cut(s)	100, 585
BseMII	CTCAG	4 cut(s)	526, 767, 907, 1422
BseNI	ACTGG	2 cut(s)	494, 652
BseRI	GAGGAG	1 cut(s)	419
BseSI	GKGCMC	1 cut(s)	523
BseXI	GCAGC	6 cut(s)	64, 938, 947, 950, 1147, 1228
BseYI	CCCAGC	1 cut(s)	1193
BsgI	GTGCAG	1 cut(s)	108
BshFI	GGCC	4 cut(s)	317, 348, 651, 1336
BshNI	GGYRCC	1 cut(s)	544
BsiHKAI	GWGCWC	3 cut(s)	523, 862, 1417
BsiHKCI	CYCGRG	1 cut(s)	726
BsiSI	CCGG	3 cut(s)	401, 600, 653
BslFI	GGGAC	1 cut(s)	679
BslI	CCNNNNNNNGG	2 cut(s)	554, 1409
BsmAI	GTCTC	1 cut(s)	1161
BsmFI	GGGAC	1 cut(s)	679
BsmI	GAATGC	3 cut(s)	216, 919, 1326
BsnI	GGCC	4 cut(s)	317, 348, 651, 1336
BsoBI	CYCGRG	1 cut(s)	726
Bsp1286I	GDGCHC	3 cut(s)	523, 862, 1417
Bsp143I	GATC	4 cut(s)	55, 220, 1204, 1418
BspACI	CCGC	3 cut(s)	1037, 1068, 1379
BspANI	GGCC	4 cut(s)	317, 348, 651, 1336
BspCNI	CTCAG	4 cut(s)	525, 766, 906, 1421
BspHI	TCATGA	1 cut(s)	58
BspLI	GGNNCC	3 cut(s)	546, 1206, 1429
BspMAI	CTGCAG	2 cut(s)	82, 852
BspMI	ACCTGC	2 cut(s)	841, 1082
BspPI	GGATC	3 cut(s)	63, 1199, 1212
BspT107I	GGYRCC	1 cut(s)	544
BsrBI	CCGCTC	1 cut(s)	1037
BsrDI	GCAATG	2 cut(s)	100, 585
BsrI	ACTGG	2 cut(s)	494, 652
BssECI	CCNNGG	3 cut(s)	465, 921, 1325
BssMI	GATC	4 cut(s)	55, 220, 1204, 1418
BssNI	GRCGYC	1 cut(s)	545
BssT1I	CCWWGG	2 cut(s)	921, 1325
Bst4CI	ACNGT	4 cut(s)	106, 301, 610, 1172
Bst6I	CTCTTC	2 cut(s)	198, 615
BstACI	GRCGYC	1 cut(s)	545
BstAPI	GCANNNNNTGC	2 cut(s)	74, 86
BstC8I	GCNNGC	3 cut(s)	91, 549, 1239
BstDEI	CTNAG	7 cut(s)	512, 577, 675, 753, 893, 1058, 1408
BstF5I	GGATG	2 cut(s)	997, 1308
BstH2I	RGCGCY	1 cut(s)	548
BstHHI	GCGC	1 cut(s)	547
BstKTI	GATC	4 cut(s)	58, 223, 1207, 1421
BstMAI	GTCTC	1 cut(s)	1161
BstMBI	GATC	4 cut(s)	55, 220, 1204, 1418
BstNSI	RCATGY	2 cut(s)	325, 1241
BstSCI	CCNGG	2 cut(s)	399, 651
BstSFI	CTRYAG	3 cut(s)	78, 300, 848
BstSLI	GKGCMC	1 cut(s)	523
BstV1I	GCAGC	6 cut(s)	64, 938, 947, 950, 1147, 1228
BstX2I	RGATCY	1 cut(s)	1204
BstYI	RGATCY	1 cut(s)	1204
Bsu36I	CCTNAGG	1 cut(s)	1408
BsuI	GTATCC	2 cut(s)	221, 456
BsuRI	GGCC	4 cut(s)	317, 348, 651, 1336
BtsCI	GGATG	2 cut(s)	997, 1308
BtsI	GCAGTG	2 cut(s)	438, 1111
BtsIMutI	CAGTG	6 cut(s)	111, 249, 438, 521, 701, 1111
BveI	ACCTGC	2 cut(s)	841, 1082
Cac8I	GCNNGC	3 cut(s)	91, 549, 1239
CciI	TCATGA	1 cut(s)	58
CfoI	GCGC	1 cut(s)	547
Cfr13I	GGNCC	2 cut(s)	650, 1180
Csp6I	GTAC	1 cut(s)	1147
CviAII	CATG	7 cut(s)	59, 115, 322, 350, 1238, 1357, 1399
CviQI	GTAC	1 cut(s)	1147
DdeI	CTNAG	7 cut(s)	512, 577, 675, 753, 893, 1058, 1408
DinI	GGCGCC	1 cut(s)	546
DpnI	GATC	4 cut(s)	57, 222, 1206, 1420
DpnII	GATC	4 cut(s)	55, 220, 1204, 1418
Eam1104I	CTCTTC	2 cut(s)	198, 615
EarI	CTCTTC	2 cut(s)	198, 615
Eco130I	CCWWGG	2 cut(s)	921, 1325
Eco47I	GGWCC	1 cut(s)	1180
Eco81I	CCTNAGG	1 cut(s)	1408
Eco88I	CYCGRG	1 cut(s)	726
EcoO109I	RGGNCCY	1 cut(s)	1180
EcoT14I	CCWWGG	2 cut(s)	921, 1325
EgeI	GGCGCC	1 cut(s)	546
EheI	GGCGCC	1 cut(s)	546
ErhI	CCWWGG	2 cut(s)	921, 1325
FaeI	CATG	7 cut(s)	62, 118, 325, 353, 1241, 1360, 1402
FaqI	GGGAC	1 cut(s)	679
FatI	CATG	7 cut(s)	58, 114, 321, 349, 1237, 1356, 1398
FauI	CCCGC	1 cut(s)	1075
FblI	GTMKAC	1 cut(s)	179
Fnu4HI	GCNGC	7 cut(s)	78, 927, 961, 964, 1161, 1242, 1379
FokI	GGATG	2 cut(s)	1004, 1295
Fsp4HI	GCNGC	7 cut(s)	78, 927, 961, 964, 1161, 1242, 1379
FspBI	CTAG	1 cut(s)	342
GlaI	GCGC	1 cut(s)	546
GluI	GCNGC	7 cut(s)	78, 927, 961, 964, 1161, 1242, 1379
GsaI	CCCAGC	1 cut(s)	1197
GsuI	CTGGAG	1 cut(s)	477
HaeII	RGCGCY	1 cut(s)	548
HaeIII	GGCC	4 cut(s)	317, 348, 651, 1336
HapII	CCGG	3 cut(s)	401, 600, 653
HhaI	GCGC	1 cut(s)	547
Hin1I	GRCGYC	1 cut(s)	545
Hin1II	CATG	7 cut(s)	62, 118, 325, 353, 1241, 1360, 1402
Hin6I	GCGC	1 cut(s)	545
HinP1I	GCGC	1 cut(s)	545
HincII	GTYRAC	2 cut(s)	382, 739
HindII	GTYRAC	2 cut(s)	382, 739
HindIII	AAGCTT	1 cut(s)	483
HinfI	GANTC	2 cut(s)	695, 1303
HpaII	CCGG	3 cut(s)	401, 600, 653
HphI	GGTGA	1 cut(s)	569
Hpy166II	GTNNAC	5 cut(s)	180, 382, 521, 560, 739
Hpy188I	TCNGA	4 cut(s)	515, 756, 896, 1273
Hpy188III	TCNNGA	6 cut(s)	59, 281, 728, 979, 1048, 1288
Hpy8I	GTNNAC	5 cut(s)	180, 382, 521, 560, 739
Hpy99I	CGWCG	1 cut(s)	1289
HpyAV	CCTTC	8 cut(s)	142, 200, 562, 874, 932, 1114, 1326, 1358
HpyCH4III	ACNGT	4 cut(s)	106, 301, 610, 1172
HpyF3I	CTNAG	7 cut(s)	512, 577, 675, 753, 893, 1058, 1408
Hsp92I	GRCGYC	1 cut(s)	545
Hsp92II	CATG	7 cut(s)	62, 118, 325, 353, 1241, 1360, 1402
HspAI	GCGC	1 cut(s)	545
KasI	GGCGCC	1 cut(s)	544
Kzo9I	GATC	4 cut(s)	55, 220, 1204, 1418
LmnI	GCTCC	5 cut(s)	406, 602, 857, 1034, 1234
Lsp1109I	GCAGC	6 cut(s)	64, 938, 947, 950, 1147, 1228
LweI	GCATC	5 cut(s)	895, 982, 1253, 1264, 1365
MaeI	CTAG	1 cut(s)	342
MaeIII	GTNAC	3 cut(s)	247, 337, 709
MalI	GATC	4 cut(s)	57, 222, 1206, 1420
MbiI	CCGCTC	1 cut(s)	1037
MboI	GATC	4 cut(s)	55, 220, 1204, 1418
MboII	GAAGA	9 cut(s)	185, 632, 797, 811, 834, 914, 1031, 1039, 1329
MfeI	CAATTG	2 cut(s)	450, 930
MflI	RGATCY	1 cut(s)	1204
MhlI	GDGCHC	3 cut(s)	523, 862, 1417
Mly113I	GGCGCC	1 cut(s)	545
MlyI	GAGTC	1 cut(s)	689
MroXI	GAANNNNTTC	1 cut(s)	789
MseI	TTAA	5 cut(s)	414, 488, 540, 806, 1293
MspI	CCGG	3 cut(s)	401, 600, 653
MspR9I	CCNGG	2 cut(s)	401, 653
MunI	CAATTG	2 cut(s)	450, 930
Mva1269I	GAATGC	3 cut(s)	216, 919, 1326
NarI	GGCGCC	1 cut(s)	545
NciI	CCSGG	2 cut(s)	401, 653
NdeII	GATC	4 cut(s)	55, 220, 1204, 1418
NlaIII	CATG	7 cut(s)	62, 118, 325, 353, 1241, 1360, 1402
NlaIV	GGNNCC	3 cut(s)	546, 1206, 1429
NmeAIII	GCCGAG	1 cut(s)	490
NmuCI	GTSAC	1 cut(s)	247
NspI	RCATGY	2 cut(s)	325, 1241
PaeI	GCATGC	1 cut(s)	1241
PaeR7I	CTCGAG	1 cut(s)	726
PagI	TCATGA	1 cut(s)	58
PaqCI	CACCTGC	1 cut(s)	1082
PciI	ACATGT	1 cut(s)	321
PctI	GAATGC	3 cut(s)	216, 919, 1326
PdmI	GAANNNNTTC	1 cut(s)	789
PfeI	GAWTC	1 cut(s)	1303
PkrI	GCNGC	7 cut(s)	79, 928, 962, 965, 1162, 1243, 1380
PleI	GAGTC	1 cut(s)	689
PluTI	GGCGCC	1 cut(s)	548
PpsI	GAGTC	1 cut(s)	689
PpuMI	RGGWCCY	1 cut(s)	1180
PscI	ACATGT	1 cut(s)	321
Psp5II	RGGWCCY	1 cut(s)	1180
PspFI	CCCAGC	1 cut(s)	1193
PspN4I	GGNNCC	3 cut(s)	546, 1206, 1429
PspPI	GGNCC	2 cut(s)	650, 1180
PspPPI	RGGWCCY	1 cut(s)	1180
PsrI	GAACNNNNNNTAC	4 cut(s)	104, 136, 1107, 1139
PstI	CTGCAG	2 cut(s)	82, 852
PsuI	RGATCY	1 cut(s)	1204
RsaI	GTAC	1 cut(s)	1148
RsaNI	GTAC	1 cut(s)	1147
SaqAI	TTAA	5 cut(s)	414, 488, 540, 806, 1293
SatI	GCNGC	7 cut(s)	78, 927, 961, 964, 1161, 1242, 1379
Sau3AI	GATC	4 cut(s)	55, 220, 1204, 1418
Sau96I	GGNCC	2 cut(s)	650, 1180
SchI	GAGTC	1 cut(s)	689
ScrFI	CCNGG	2 cut(s)	401, 653
SduI	GDGCHC	3 cut(s)	523, 862, 1417
SfaNI	GCATC	5 cut(s)	895, 982, 1253, 1264, 1365
SfcI	CTRYAG	3 cut(s)	78, 300, 848
SfoI	GGCGCC	1 cut(s)	546
Sfr274I	CTCGAG	1 cut(s)	726
SinI	GGWCC	1 cut(s)	1180
SlaI	CTCGAG	1 cut(s)	726
SmlI	CTYRAG	1 cut(s)	726
SmoI	CTYRAG	1 cut(s)	726
SphI	GCATGC	1 cut(s)	1241
SsiI	CCGC	3 cut(s)	1037, 1068, 1379
SspDI	GGCGCC	1 cut(s)	544
SspI	AATATT	1 cut(s)	1044
SspMI	CTAG	1 cut(s)	342
StyD4I	CCNGG	2 cut(s)	399, 651
StyI	CCWWGG	2 cut(s)	921, 1325
TaaI	ACNGT	4 cut(s)	106, 301, 610, 1172
TaqI	TCGA	4 cut(s)	727, 980, 1287, 1417
TaqII	GACCGA	1 cut(s)	270
TauI	GCSGC	1 cut(s)	1381
TfiI	GAWTC	1 cut(s)	1303
Tru1I	TTAA	5 cut(s)	414, 488, 540, 806, 1293
Tru9I	TTAA	5 cut(s)	414, 488, 540, 806, 1293
TscAI	CASTG	6 cut(s)	111, 256, 438, 528, 708, 1111
TseFI	GTSAC	1 cut(s)	247
TseI	GCWGC	6 cut(s)	77, 926, 960, 963, 1160, 1241
Tsp45I	GTSAC	1 cut(s)	247
TspDTI	ATGAA	6 cut(s)	75, 348, 366, 825, 1032, 1202
TspGWI	ACGGA	2 cut(s)	197, 1164
TspRI	CASTG	6 cut(s)	111, 256, 438, 528, 708, 1111
VneI	GTGCAC	1 cut(s)	519
VpaK11BI	GGWCC	1 cut(s)	1180
XapI	RAATTY	3 cut(s)	11, 354, 788
XceI	RCATGY	2 cut(s)	325, 1241
XhoI	CTCGAG	1 cut(s)	726
XmiI	GTMKAC	1 cut(s)	179
XmnI	GAANNNNTTC	1 cut(s)	789
XspI	CTAG	1 cut(s)	342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.