Prupe.1G300500_v2.0.a1

Importin-9

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
29508785 .. 29520481
11697 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G300500.1

Sequence Viewer

Length: 3096 bp
ATGGCGAATTTCAATATCGTCGTCGATGAAGATCAGCAATGGCTGCTCAATTGCTTGTCTGCTACTCTCGACCCTAATCACGAGGTTCGCTCATTCGCCGAAGCTTCGCTTAATCAGGCTTCTCTGCAACCAGGTTTTGGAAGTGCGTTATCCAAGGTTGCTGCTAACAGGGAGCTCCCATTAGGGTTGCGCCAGCTAGCTGCTGTCCTTCTTAAGCAGTTTATTAAGAAACACTGGCATGAGGCTGAGGAAGCATTTGAACATCCTGCTGTTTCAAGCGACGAGAAGGCAGTTGTACGCAGACTTCTGTTGTTGTCTTTGGATGATTCTCACAGGAAAATCTGTACAGCAATTAGTATGGCTGTTGCATCTATAGCAGTTTATGACTGGCCAGAGGTTTGGCCTGACTTATTGCCGTACCTAATGAAGTTGATAAATGATCAAACTAATATGAATGGAGTACATGGTGCTCTAAGGTGCTTGGCTCTTCTGTCTGTTGACTTGGATGATACAGTGGTTCCAACATTAGTACCAGCCTTGTTCCCATGCTTGCTTAAAATCGTATCTTCTCCAGAGATGTATGACAAATATTTACGCACAAAAGCTCTTTCAATTGTTTATTCTTGTATCTCCATGTTGGGGGTGATGAGTGGTGTATATAAGACGGAAACCAGTGCATTAATAGTGCCAATGGTTAAGCCATGGATGGATCAATTCTCTAAGATCCTCAATCATCCTCTGCAATCTGAAGATCCCGATGATTGGAGCATAAGAACGGAGGTACTGAAGTGCTTGAATCAGTTTGTTCAGAACTTTCCTAGCCTCATTGAAAGTGAATTTATGATTATTGTAGGACCATTGTGGCAAACCTTTATGACTTCTCTTGGAGTATATGTGCGATCATCTATTGAAGGTACAGAAGATCCATTTGATGGAAGATATGATTCTGATGGGGCTGAGAAAAGCCTTGATTCCTTCGTTGTCCAGTTGTTTGAGTTTCTGTTGACCATTGTGGGTAGCGCAAAATTGGTAAAGGTCATTATGAATAATGTGGAAGAGTTGACATATTACACCATCGCTTTTCTCCAAATAACAGAACAACAGGTTCATACTTGGTCAATGGATGCCAACCAATTTGTAGCTGATGAGGATGATGTTACTTATAGCTGTCGTGTTTCTGGTGCACTTTTGCTTGAAGAAGTGGTGAATTCATGTGGTACAGAAGGAATCAGAGCCATCATTGAGGCTGCAAAAAAGCGTTTTAGTGAGTCTCAAAGAGAAAAGGATGCTGGTTCTCCAATTTGGTGGAGAATAAGGGAGGCTACTCTTTTTGCTTTGGCTTCTCTATCAGAACAATTGCTTGAAGCAGAGGATTCAGAACTGACAAGAGTTGGCTCAGGAAACCTACTGGAGCAAATAATCACGGAAGACATTGGATTAGATGTACATCAATATCCCTTTCTTTATTCTCGTATCTTTTCATCAGTTGCTAAATTCTCCTCTGTGATCAGCCATGGAGTTCTTGAGCACTTTCTCTATGCTGCTATCAAAACAATTAGCATGGATGTGCCCCCACCTGTCAAAGTAGGTGCCTGCAGGGCTCTTTCTGAGCTCCTACCTGAAACAAATAAAGTTATAATTCACCCGCATCTGATGAGTTTGTTTCAATCACTGTCGGATCTTCTTAATCAGGCATCTGATGAAACCTTGCACTTGGTACTTGAAACACTGCAAGAGGCAATTAAGGCCGGTTACGAATTATCGGCATCAATAGAGCCTATCATCTCTCCTGTTGTCCTGAACATGTGGGCATCACACATTTCCGATCCTTTCATCTGTATTGATGCAATTGAAGTTATGGAGACACTGAAGAATGCTCCTGGTTGTATTCGTCCACTGGTTTCTCGAGTTTTACCATATATTTGGCCAGTCCTGAATAAGCCCCAACAGCAGCCTGATGGATTAGTAGCTGGATCAGTGGATCTGGTAACAATGTTATTGAAAAATGCTCCTATTGATGTGGTGAAAACAATATATGATGCCTGTTTTGATACTGTTATACGAATAGTCCTTCAAAGTGACGATCATAGTGAAATGCAGAATGCAACGGAATGTTTAGCTGCTTTTGTATCTGGTGGAAGACAAGATGTGCTTGCTTGGAGTGGTGATTTGGAAAATACAATGAGAAGATTGCTTGATGCAGCATCAAGGCTTCTAGACCCTGATTTGGATAGCTCTGGTTCTCTTTTTGTTGGGAGCTACATTCTGCAACTTATTTTGCATCTGCCATCACAGATGGCGCCCCATATTCGAGACCTGGTTGCTGCTCTTATTAGGCGCATGCAATCTGCTCAAATAGCAGGATTGAGAAGCTCACTGCTACTCATTTTTGCTCGATTGGTCCACTTAAGTGCCCCTAAAGTTGAACAGTTTATTGACCTCCTGGTCACCATCCCAGCTGAAGGCTATGATAATTCTTTCGTCTATTTAATGTCAGAATGGACTCAGCAGCAAGGTGAGATCCAGGGGGCTTACCAAATTAAAGTCACTACTACTGCTTTGGCCTTATTACTATCATCTAGGCATGCTGAATTAACAAAAATTAACGTGCAAGGATATTTATTTCAGTCTGCTGCTGGAATAACCACTCGCTCAAAAGCTAAATTAACTCCAGATCAGTGGACTGTGGTGCCACTTCCTGCAAAGATAATGGCTTTACTGGCAGATGCATTGGTTGAAATCCAAGAACAGGTTGTAGCTGGTGATAATGAGGATAGTGACTGGGAAGAGGTTGAGGCAGACGATGTGGAACTTGATAAGGACTTGATGTATTCAGCTGGTGTTACATCCTCCGGCAGACCCTCACACCAACATCTTGAAGCAATAGCAAAAGCATTTAATAAGGATGAGGAGGAGGATAGGTATGAAGATGATCAACTAACTGTGGCTGATCCCCTTAACCAGATTAATCTGGCGAACTATCTTGCGGAGTTTTTCGTAAACTTTTCTCAGAGTGAAAGACAAATGTTTGATCATATTTTCCAGAGCCTGACGCAGGATCAAAGGAATGCTATTCAAATGGTACGAGCTCAGTGA

Protein Analysis

1032

Amino Acids

114.92

Weight (kDa)

4.7

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016169)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26170
fragaria_vesca FvH4_4g28521 FvH4_4g28521
malus_domestica MD16G1051700.v1.1
prunus_persica Prupe.1G300500_v2.0.a1
pyrus_communis pycom16g04540
rosa_chinensis RchiOBHm_Chr4g0436541
rosa_laevigata RLG00000006510
rosa_roxburghii Rroxscaffold_5G00377650
rosa_rugosa Rorug04G0294700
rosa_samantha Rh4AG349000 Rh4BG357600 Rh4CG372000 Rh4DG351600
rosa_wichuraiana Rw4G030530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1637
AasI GACNNNNNNGTC 1 cut(s) 2444
AccB1I GGYRCC 3 cut(s) 1589, 2299, 2689
AccB7I CCANNNNNTGG 2 cut(s) 137, 932
AciI CCGC 2 cut(s) 1646, 2987
AcoI YGGCCR 2 cut(s) 389, 1925
AcsI RAATTY 4 cut(s) 7, 836, 1207, 1493
AcuI CTGAAG 4 cut(s) 768, 806, 1889, 2481
AcyI GRCGYC 1 cut(s) 2300
AfiI CCNNNNNNNGG 8 cut(s) 137, 639, 762, 932, 2227, 2462, 2749, 3055
AflII CTTAAG 2 cut(s) 212, 2407
AflIII ACRYGT 1 cut(s) 1803
AjnI CCWGG 5 cut(s) 130, 1879, 2316, 2442, 2523
AleI CACNNNNGTG 1 cut(s) 2409
Alw21I GWGCWC 6 cut(s) 177, 472, 1186, 1530, 1614, 3091
Alw26I GTCTC 3 cut(s) 1275, 1856, 2307
Alw44I GTGCAC 1 cut(s) 1182
AlwNI CAGNNNCTG 1 cut(s) 3049
Ama87I CYCGRG 1 cut(s) 1905
AoxI GGCC 5 cut(s) 389, 401, 1746, 1925, 2562
ApaLI GTGCAC 1 cut(s) 1182
ApoI RAATTY 4 cut(s) 7, 836, 1207, 1493
AseI ATTAAT 2 cut(s) 680, 2967
AspLEI GCGC 4 cut(s) 192, 1022, 2302, 2340
AspS9I GGNCC 2 cut(s) 854, 2401
AsuHPI GGTGA 8 cut(s) 655, 1216, 1634, 2035, 2177, 2440, 2528, 2774
AsuNHI GCTAGC 1 cut(s) 196
AvaI CYCGRG 1 cut(s) 1905
AvaII GGWCC 2 cut(s) 854, 2401
BaeGI GKGCMC 3 cut(s) 1186, 1572, 2416
BaeI ACNNNNGTAYC 6 cut(s) 501, 513, 534, 546, 773, 806
BalI TGGCCA 2 cut(s) 391, 1927
BanI GGYRCC 3 cut(s) 1589, 2299, 2689
BanII GRGCYC 4 cut(s) 177, 1603, 1614, 3091
BarI GAAGNNNNNNTAC 2 cut(s) 288, 320
BauI CACGAG 1 cut(s) 80
BbsI GAAGAC 2 cut(s) 1434, 2146
Bbv12I GWGCWC 6 cut(s) 177, 472, 1186, 1530, 1614, 3091
BbvCI CCTCAGC 1 cut(s) 246
BccI CCATC 9 cut(s) 700, 926, 944, 1082, 1244, 1952, 2290, 2296, 2459
BceAI ACGGC 1 cut(s) 400
BciT130I CCWGG 5 cut(s) 132, 1881, 2318, 2444, 2525
BclI TGATCA 4 cut(s) 439, 1506, 2932, 3031
BcoDI GTCTC 3 cut(s) 1275, 1856, 2307
BfaI CTAG 4 cut(s) 197, 819, 2216, 2580
BfmI CTRYAG 2 cut(s) 372, 1594
BfoI RGCGCY 1 cut(s) 2303
BfrI CTTAAG 2 cut(s) 212, 2407
BglI GCCNNNNNGGC 1 cut(s) 1598
Bme1390I CCNGG 5 cut(s) 132, 1881, 2318, 2444, 2525
Bme18I GGWCC 2 cut(s) 854, 2401
BmeT110I CYCGRG 1 cut(s) 1905
BmgT120I GGNCC 2 cut(s) 854, 2401
BmiI GGNNCC 4 cut(s) 519, 1591, 2301, 2691
BmrFI CCNGG 5 cut(s) 132, 1881, 2318, 2444, 2525
BmrI ACTGGG 1 cut(s) 2791
BmtI GCTAGC 1 cut(s) 200
BmuI ACTGGG 1 cut(s) 2791
BpiI GAAGAC 2 cut(s) 1434, 2146
BplI GAGNNNNNCTC 2 cut(s) 74, 106
BpmI CTGGAG 3 cut(s) 555, 1430, 2655
Bpu10I CCTNAGC 2 cut(s) 246, 1396
BpuEI CTTGAG 1 cut(s) 1544
BsaBI GATNNNNATC 2 cut(s) 30, 1446
BsaHI GRCGYC 1 cut(s) 2300
BsaI GGTCTC 1 cut(s) 2307
BsaJI CCNNGG 4 cut(s) 153, 701, 1513, 2524
BsaXI ACNNNNNCTCC 4 cut(s) 879, 909, 2906, 2936
Bsc4I CCNNNNNNNGG 8 cut(s) 137, 639, 762, 932, 2227, 2462, 2749, 3055
Bse118I RCCGGY 1 cut(s) 1748
Bse1I ACTGG 9 cut(s) 239, 392, 672, 985, 1413, 1902, 1928, 2724, 2786
Bse3DI GCAATG 1 cut(s) 44
Bse8I GATNNNNATC 2 cut(s) 30, 1446
BseBI CCWGG 5 cut(s) 132, 1881, 2318, 2444, 2525
BseDI CCNNGG 4 cut(s) 153, 701, 1513, 2524
BseJI GATNNNNATC 2 cut(s) 30, 1446
BseLI CCNNNNNNNGG 8 cut(s) 137, 639, 762, 932, 2227, 2462, 2749, 3055
BseMI GCAATG 1 cut(s) 44
BseMII CTCAG 6 cut(s) 237, 948, 1410, 1599, 2519, 3023
BseNI ACTGG 9 cut(s) 239, 392, 672, 985, 1413, 1902, 1928, 2724, 2786
BseRI GAGGAG 3 cut(s) 1489, 2924, 2927
BseSI GKGCMC 3 cut(s) 1186, 1572, 2416
BseYI CCCAGC 1 cut(s) 2455
BshFI GGCC 5 cut(s) 391, 403, 1748, 1927, 2564
BshNI GGYRCC 3 cut(s) 1589, 2299, 2689
BsiHKAI GWGCWC 6 cut(s) 177, 472, 1186, 1530, 1614, 3091
BsiHKCI CYCGRG 1 cut(s) 1905
BsiSI CCGG 2 cut(s) 1749, 2853
BslI CCNNNNNNNGG 8 cut(s) 137, 639, 762, 932, 2227, 2462, 2749, 3055
BsmAI GTCTC 3 cut(s) 1275, 1856, 2307
BsmI GAATGC 3 cut(s) 1879, 2107, 3073
BsnI GGCC 5 cut(s) 391, 403, 1748, 1927, 2564
Bso31I GGTCTC 1 cut(s) 2307
BsoBI CYCGRG 1 cut(s) 1905
Bsp1286I GDGCHC 9 cut(s) 177, 472, 1186, 1530, 1572, 1603, 1614, 2416, 3091
Bsp1407I TGTACA 2 cut(s) 344, 1444
Bsp19I CCATGG 2 cut(s) 701, 1513
BspACI CCGC 2 cut(s) 1646, 2987
BspANI GGCC 5 cut(s) 391, 403, 1748, 1927, 2564
BspCNI CTCAG 6 cut(s) 238, 949, 1409, 1600, 2518, 3022
BspLI GGNNCC 4 cut(s) 519, 1591, 2301, 2691
BspMAI CTGCAG 1 cut(s) 1598
BspOI GCTAGC 1 cut(s) 200
BspQI GCTCTTC 1 cut(s) 492
BspT107I GGYRCC 3 cut(s) 1589, 2299, 2689
BspTI CTTAAG 2 cut(s) 212, 2407
BspTNI GGTCTC 1 cut(s) 2307
BsrDI GCAATG 1 cut(s) 44
BsrFI RCCGGY 1 cut(s) 1748
BsrGI TGTACA 2 cut(s) 344, 1444
BsrI ACTGG 9 cut(s) 239, 392, 672, 985, 1413, 1902, 1928, 2724, 2786
BssAI RCCGGY 1 cut(s) 1748
BssECI CCNNGG 4 cut(s) 153, 701, 1513, 2524
BssNI GRCGYC 1 cut(s) 2300
BssSI CACGAG 1 cut(s) 80
BssT1I CCWWGG 3 cut(s) 153, 701, 1513
Bst2BI CACGAG 1 cut(s) 80
Bst2UI CCWGG 5 cut(s) 132, 1881, 2318, 2444, 2525
Bst4CI ACNGT 6 cut(s) 514, 1674, 2056, 2430, 2686, 2944
Bst6I CTCTTC 3 cut(s) 492, 1050, 2781
BstACI GRCGYC 1 cut(s) 2300
BstAFI CTTAAG 2 cut(s) 212, 2407
BstAPI GCANNNNNTGC 1 cut(s) 43
BstAUI TGTACA 2 cut(s) 344, 1444
BstC8I GCNNGC 7 cut(s) 194, 198, 551, 1594, 2154, 2342, 2586
BstDEI CTNAG 9 cut(s) 246, 473, 720, 957, 1396, 1608, 2505, 3009, 3090
BstDSI CCRYGG 2 cut(s) 701, 1513
BstEII GGTNACC 1 cut(s) 2446
BstENI CCTNNNNNAGG 1 cut(s) 3053
BstH2I RGCGCY 1 cut(s) 2303
BstHHI GCGC 4 cut(s) 192, 1022, 2302, 2340
BstMAI GTCTC 3 cut(s) 1275, 1856, 2307
BstMWI GCNNNNNNNGC 8 cut(s) 43, 251, 374, 1598, 1745, 1948, 2357, 2720
BstNI CCWGG 5 cut(s) 132, 1881, 2318, 2444, 2525
BstNSI RCATGY 3 cut(s) 1807, 2344, 2588
BstPI GGTNACC 1 cut(s) 2446
BstSCI CCNGG 5 cut(s) 130, 1879, 2316, 2442, 2523
BstSFI CTRYAG 2 cut(s) 372, 1594
BstSLI GKGCMC 3 cut(s) 1186, 1572, 2416
BstV2I GAAGAC 2 cut(s) 1434, 2146
BstX2I RGATCY 6 cut(s) 723, 751, 922, 1678, 1981, 2520
BstXI CCANNNNNNTGG 4 cut(s) 399, 1305, 1923, 2679
BstYI RGATCY 6 cut(s) 723, 751, 922, 1678, 1981, 2520
BsuRI GGCC 5 cut(s) 391, 403, 1748, 1927, 2564
BtgI CCRYGG 2 cut(s) 701, 1513
BtgZI GCGATG 1 cut(s) 1060
BtsI GCAGTG 2 cut(s) 1727, 2375
Cac8I GCNNGC 7 cut(s) 194, 198, 551, 1594, 2154, 2342, 2586
CaiI CAGNNNCTG 1 cut(s) 3049
CfoI GCGC 4 cut(s) 192, 1022, 2302, 2340
Cfr10I RCCGGY 1 cut(s) 1748
Cfr13I GGNCC 2 cut(s) 854, 2401
CseI GACGC 1 cut(s) 3061
CsiI ACCWGGT 2 cut(s) 130, 2316
DdeI CTNAG 9 cut(s) 246, 473, 720, 957, 1396, 1608, 2505, 3009, 3090
DinI GGCGCC 1 cut(s) 2301
DrdI GACNNNNNNGTC 1 cut(s) 2444
DseDI GACNNNNNNGTC 1 cut(s) 2444
EaeI YGGCCR 2 cut(s) 389, 1925
Eam1104I CTCTTC 3 cut(s) 492, 1050, 2781
EarI CTCTTC 3 cut(s) 492, 1050, 2781
Ecl136II GAGCTC 3 cut(s) 175, 1612, 3089
Eco130I CCWWGG 3 cut(s) 153, 701, 1513
Eco24I GRGCYC 4 cut(s) 177, 1603, 1614, 3091
Eco31I GGTCTC 1 cut(s) 2307
Eco47I GGWCC 2 cut(s) 854, 2401
Eco53kI GAGCTC 3 cut(s) 175, 1612, 3089
Eco57I CTGAAG 4 cut(s) 768, 806, 1889, 2481
Eco88I CYCGRG 1 cut(s) 1905
Eco91I GGTNACC 1 cut(s) 2446
EcoICRI GAGCTC 3 cut(s) 175, 1612, 3089
EcoNI CCTNNNNNAGG 1 cut(s) 3053
EcoO65I GGTNACC 1 cut(s) 2446
EcoRI GAATTC 1 cut(s) 1207
EcoRII CCWGG 5 cut(s) 130, 1879, 2316, 2442, 2523
EcoT14I CCWWGG 3 cut(s) 153, 701, 1513
EcoT22I ATGCAT 1 cut(s) 2731
EcoT38I GRGCYC 4 cut(s) 177, 1603, 1614, 3091
EgeI GGCGCC 1 cut(s) 2301
EheI GGCGCC 1 cut(s) 2301
ErhI CCWWGG 3 cut(s) 153, 701, 1513
FalI AAGNNNNNCTT 4 cut(s) 93, 125, 2136, 2168
FauI CCCGC 1 cut(s) 1653
FbaI TGATCA 4 cut(s) 439, 1506, 2932, 3031
FriOI GRGCYC 4 cut(s) 177, 1603, 1614, 3091
FspBI CTAG 4 cut(s) 197, 819, 2216, 2580
GlaI GCGC 4 cut(s) 191, 1021, 2301, 2339
GsaI CCCAGC 1 cut(s) 2459
GsuI CTGGAG 3 cut(s) 555, 1430, 2655
HaeII RGCGCY 1 cut(s) 2303
HaeIII GGCC 5 cut(s) 391, 403, 1748, 1927, 2564
HapII CCGG 2 cut(s) 1749, 2853
HgaI GACGC 1 cut(s) 3061
HhaI GCGC 4 cut(s) 192, 1022, 2302, 2340
Hin1I GRCGYC 1 cut(s) 2300
Hin6I GCGC 4 cut(s) 190, 1020, 2300, 2338
HinP1I GCGC 4 cut(s) 190, 1020, 2300, 2338
HincII GTYRAC 3 cut(s) 499, 1005, 1062
HindII GTYRAC 3 cut(s) 499, 1005, 1062
HindIII AAGCTT 1 cut(s) 102
HinfI GANTC 8 cut(s) 326, 796, 944, 971, 1227, 1268, 1373, 2503
HpaII CCGG 2 cut(s) 1749, 2853
HphI GGTGA 8 cut(s) 655, 1216, 1634, 2035, 2177, 2440, 2528, 2774
Hpy166II GTNNAC 8 cut(s) 499, 1005, 1062, 1184, 1895, 2404, 2682, 3001
Hpy8I GTNNAC 8 cut(s) 499, 1005, 1062, 1184, 1895, 2404, 2682, 3001
Hpy99I CGWCG 3 cut(s) 23, 26, 284
HpyAV CCTTC 7 cut(s) 218, 280, 905, 985, 1217, 2081, 2456
HpyCH4III ACNGT 6 cut(s) 514, 1674, 2056, 2430, 2686, 2944
HpyCH4IV ACGT 1 cut(s) 2607
HpyF10VI GCNNNNNNNGC 8 cut(s) 43, 251, 374, 1598, 1745, 1948, 2357, 2720
HpyF3I CTNAG 9 cut(s) 246, 473, 720, 957, 1396, 1608, 2505, 3009, 3090
HpySE526I ACGT 1 cut(s) 2607
Hsp92I GRCGYC 1 cut(s) 2300
HspAI GCGC 4 cut(s) 190, 1020, 2300, 2338
KasI GGCGCC 1 cut(s) 2299
Ksp22I TGATCA 4 cut(s) 439, 1506, 2932, 3031
LguI GCTCTTC 1 cut(s) 492
LmnI GCTCC 8 cut(s) 172, 180, 765, 1411, 1617, 1882, 2014, 2256
MabI ACCWGGT 2 cut(s) 130, 2316
MaeI CTAG 4 cut(s) 197, 819, 2216, 2580
MaeII ACGT 1 cut(s) 2607
MaeIII GTNAC 8 cut(s) 1156, 1751, 1987, 2078, 2446, 2545, 2777, 2842
MfeI CAATTG 4 cut(s) 49, 612, 1355, 1848
MflI RGATCY 6 cut(s) 723, 751, 922, 1678, 1981, 2520
MhlI GDGCHC 9 cut(s) 177, 472, 1186, 1530, 1572, 1603, 1614, 2416, 3091
MlsI TGGCCA 2 cut(s) 391, 1927
MluNI TGGCCA 2 cut(s) 391, 1927
Mly113I GGCGCC 1 cut(s) 2300
MlyI GAGTC 2 cut(s) 1277, 2497
MmeI TCCRAC 2 cut(s) 545, 1656
Mox20I TGGCCA 2 cut(s) 391, 1927
Mph1103I ATGCAT 1 cut(s) 2731
MscI TGGCCA 2 cut(s) 391, 1927
MslI CAYNNNNRTG 3 cut(s) 237, 1565, 2409
Msp20I TGGCCA 2 cut(s) 391, 1927
MspA1I CMGCKG 2 cut(s) 2459, 2837
MspCI CTTAAG 2 cut(s) 212, 2407
MspI CCGG 2 cut(s) 1749, 2853
MspR9I CCNGG 5 cut(s) 132, 1881, 2318, 2444, 2525
MunI CAATTG 4 cut(s) 49, 612, 1355, 1848
Mva1269I GAATGC 3 cut(s) 1879, 2107, 3073
MvaI CCWGG 5 cut(s) 132, 1881, 2318, 2444, 2525
MwoI GCNNNNNNNGC 8 cut(s) 43, 251, 374, 1598, 1745, 1948, 2357, 2720
NarI GGCGCC 1 cut(s) 2300
NcoI CCATGG 2 cut(s) 701, 1513
NheI GCTAGC 1 cut(s) 196
NlaIV GGNNCC 4 cut(s) 519, 1591, 2301, 2691
NmuCI GTSAC 4 cut(s) 2078, 2446, 2545, 2777
NsiI ATGCAT 1 cut(s) 2731
NspI RCATGY 3 cut(s) 1807, 2344, 2588
OliI CACNNNNGTG 1 cut(s) 2409
PaeI GCATGC 2 cut(s) 2344, 2588
PaeR7I CTCGAG 1 cut(s) 1905
PciI ACATGT 1 cut(s) 1803
PciSI GCTCTTC 1 cut(s) 492
PctI GAATGC 3 cut(s) 1879, 2107, 3073
PfeI GAWTC 6 cut(s) 326, 796, 944, 971, 1227, 1373
PflMI CCANNNNNTGG 2 cut(s) 137, 932
PleI GAGTC 2 cut(s) 1276, 2497
PluTI GGCGCC 1 cut(s) 2303
PpsI GAGTC 2 cut(s) 1276, 2497
PscI ACATGT 1 cut(s) 1803
PshBI ATTAAT 2 cut(s) 680, 2967
PsiI TTATAA 1 cut(s) 1637
Psp124BI GAGCTC 3 cut(s) 177, 1614, 3091
Psp6I CCWGG 5 cut(s) 130, 1879, 2316, 2442, 2523
PspEI GGTNACC 1 cut(s) 2446
PspFI CCCAGC 1 cut(s) 2455
PspGI CCWGG 5 cut(s) 130, 1879, 2316, 2442, 2523
PspN4I GGNNCC 4 cut(s) 519, 1591, 2301, 2691
PspPI GGNCC 2 cut(s) 854, 2401
PstI CTGCAG 1 cut(s) 1598
PstNI CAGNNNCTG 1 cut(s) 3049
PsuI RGATCY 6 cut(s) 723, 751, 922, 1678, 1981, 2520
PvuII CAGCTG 2 cut(s) 2459, 2837
RseI CAYNNNNRTG 3 cut(s) 237, 1565, 2409
SacI GAGCTC 3 cut(s) 177, 1614, 3091
SapI GCTCTTC 1 cut(s) 492
Sau96I GGNCC 2 cut(s) 854, 2401
SbfI CCTGCAGG 1 cut(s) 1598
SchI GAGTC 2 cut(s) 1277, 2497
ScrFI CCNGG 5 cut(s) 132, 1881, 2318, 2444, 2525
SdaI CCTGCAGG 1 cut(s) 1598
SduI GDGCHC 9 cut(s) 177, 472, 1186, 1530, 1572, 1603, 1614, 2416, 3091
SexAI ACCWGGT 2 cut(s) 130, 2316
SfcI CTRYAG 2 cut(s) 372, 1594
SfoI GGCGCC 1 cut(s) 2301
Sfr274I CTCGAG 1 cut(s) 1905
SinI GGWCC 2 cut(s) 854, 2401
SlaI CTCGAG 1 cut(s) 1905
SmiMI CAYNNNNRTG 3 cut(s) 237, 1565, 2409
SmlI CTYRAG 4 cut(s) 212, 1523, 1905, 2407
SmoI CTYRAG 4 cut(s) 212, 1523, 1905, 2407
SphI GCATGC 2 cut(s) 2344, 2588
Sse8387I CCTGCAGG 1 cut(s) 1598
SsiI CCGC 2 cut(s) 1646, 2987
SspDI GGCGCC 1 cut(s) 2299
SspI AATATT 1 cut(s) 590
SspMI CTAG 4 cut(s) 197, 819, 2216, 2580
SstI GAGCTC 3 cut(s) 177, 1614, 3091
StyD4I CCNGG 5 cut(s) 130, 1879, 2316, 2442, 2523
StyI CCWWGG 3 cut(s) 153, 701, 1513
TaaI ACNGT 6 cut(s) 514, 1674, 2056, 2430, 2686, 2944
TaiI ACGT 1 cut(s) 2610
TaqI TCGA 5 cut(s) 24, 69, 1906, 2311, 2395
TatI WGTACW 3 cut(s) 344, 460, 1444
TfiI GAWTC 6 cut(s) 326, 796, 944, 971, 1227, 1373
TseFI GTSAC 4 cut(s) 2078, 2446, 2545, 2777
Tsp45I GTSAC 4 cut(s) 2078, 2446, 2545, 2777
TspGWI ACGGA 4 cut(s) 680, 791, 1439, 2123
Van91I CCANNNNNTGG 2 cut(s) 137, 932
Vha464I CTTAAG 2 cut(s) 212, 2407
VneI GTGCAC 1 cut(s) 1182
VpaK11BI GGWCC 2 cut(s) 854, 2401
VspI ATTAAT 2 cut(s) 680, 2967
XagI CCTNNNNNAGG 1 cut(s) 3053
XapI RAATTY 4 cut(s) 7, 836, 1207, 1493
XbaI TCTAGA 1 cut(s) 2215
XceI RCATGY 3 cut(s) 1807, 2344, 2588
XhoI CTCGAG 1 cut(s) 1905
XspI CTAG 4 cut(s) 197, 819, 2216, 2580
Zsp2I ATGCAT 1 cut(s) 2731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.