Importin-9
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26170 |
| fragaria_vesca | FvH4_4g28521 FvH4_4g28521 |
| malus_domestica | MD16G1051700.v1.1 |
| prunus_persica | Prupe.1G300500_v2.0.a1 |
| pyrus_communis | pycom16g04540 |
| rosa_chinensis | RchiOBHm_Chr4g0436541 |
| rosa_laevigata | RLG00000006510 |
| rosa_roxburghii | Rroxscaffold_5G00377650 |
| rosa_rugosa | Rorug04G0294700 |
| rosa_samantha | Rh4AG349000 Rh4BG357600 Rh4CG372000 Rh4DG351600 |
| rosa_wichuraiana | Rw4G030530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2864 |
| Acc16I | TGCGCA | 1 cut(s) | 335 |
| Acc36I | ACCTGC | 3 cut(s) | 404, 1775, 2864 |
| AccB1I | GGYRCC | 4 cut(s) | 1268, 1625, 2335, 2725 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1341, 2498 |
| AccBSI | CCGCTC | 1 cut(s) | 90 |
| AccI | GTMKAC | 1 cut(s) | 1924 |
| AciI | CCGC | 5 cut(s) | 60, 88, 570, 1610, 1772 |
| AclWI | GGATC | 7 cut(s) | 356, 782, 1825, 1856, 2017, 2025, 2981 |
| AcoI | YGGCCR | 4 cut(s) | 425, 437, 2890, 2982 |
| AcsI | RAATTY | 3 cut(s) | 847, 872, 3037 |
| AcyI | GRCGYC | 2 cut(s) | 1730, 1847 |
| AfaI | GTAC | 4 cut(s) | 382, 1255, 1755, 2439 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 137, 675, 1341, 2263, 2498, 2785 |
| AflIII | ACRYGT | 3 cut(s) | 1247, 1292, 1839 |
| AjnI | CCWGG | 3 cut(s) | 1749, 1915, 2352 |
| AleI | CACNNNNGTG | 1 cut(s) | 2445 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1464, 1496, 2643, 2675 |
| Alw21I | GWGCWC | 4 cut(s) | 177, 501, 508, 1566 |
| Alw26I | GTCTC | 2 cut(s) | 2343, 2488 |
| Alw44I | GTGCAC | 1 cut(s) | 497 |
| AlwI | GGATC | 7 cut(s) | 356, 782, 1825, 1856, 2017, 2025, 2981 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3085 |
| Ama87I | CYCGRG | 1 cut(s) | 1941 |
| AoxI | GGCC | 7 cut(s) | 425, 437, 890, 2565, 2598, 2890, 2982 |
| ApaLI | GTGCAC | 1 cut(s) | 497 |
| ApoI | RAATTY | 3 cut(s) | 847, 872, 3037 |
| AseI | ATTAAT | 3 cut(s) | 716, 1673, 3003 |
| AspLEI | GCGC | 3 cut(s) | 192, 336, 2376 |
| AspS9I | GGNCC | 7 cut(s) | 70, 85, 553, 890, 2254, 2538, 2565 |
| AsuC2I | CCSGG | 2 cut(s) | 132, 2049 |
| AsuHPI | GGTGA | 7 cut(s) | 691, 1252, 1953, 2035, 2071, 2213, 2564 |
| AsuNHI | GCTAGC | 1 cut(s) | 1768 |
| AvaI | CYCGRG | 1 cut(s) | 1941 |
| AvaII | GGWCC | 5 cut(s) | 70, 85, 553, 2254, 2538 |
| AxyI | CCTNAGG | 1 cut(s) | 609 |
| BaeGI | GKGCMC | 4 cut(s) | 501, 1608, 1639, 2452 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 537, 570, 582, 615 |
| BalI | TGGCCA | 2 cut(s) | 427, 2892 |
| BanI | GGYRCC | 4 cut(s) | 1268, 1625, 2335, 2725 |
| BanII | GRGCYC | 2 cut(s) | 177, 508 |
| BauI | CACGAG | 1 cut(s) | 80 |
| BbsI | GAAGAC | 2 cut(s) | 1470, 2182 |
| Bbv12I | GWGCWC | 4 cut(s) | 177, 501, 508, 1566 |
| BccI | CCATC | 9 cut(s) | 962, 980, 1280, 1988, 2081, 2332, 2492, 2831, 2948 |
| BceAI | ACGGC | 1 cut(s) | 653 |
| BciT130I | CCWGG | 3 cut(s) | 1751, 1917, 2354 |
| BclI | TGATCA | 4 cut(s) | 1542, 2119, 2710, 3067 |
| BcnI | CCSGG | 2 cut(s) | 132, 2049 |
| BcoDI | GTCTC | 2 cut(s) | 2343, 2488 |
| BfaI | CTAG | 8 cut(s) | 182, 233, 1004, 1445, 1769, 2169, 2616, 2796 |
| BfmI | CTRYAG | 2 cut(s) | 399, 1630 |
| BfuAI | ACCTGC | 3 cut(s) | 404, 1775, 2864 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 898, 1634 |
| BglII | AGATCT | 1 cut(s) | 1714 |
| Bme1390I | CCNGG | 5 cut(s) | 132, 1751, 1917, 2049, 2354 |
| Bme18I | GGWCC | 5 cut(s) | 70, 85, 553, 2254, 2538 |
| BmeT110I | CYCGRG | 1 cut(s) | 1941 |
| BmgT120I | GGNCC | 7 cut(s) | 70, 85, 553, 890, 2254, 2538, 2565 |
| BmiI | GGNNCC | 9 cut(s) | 72, 555, 891, 1270, 1627, 2256, 2337, 2566, 2727 |
| BmrFI | CCNGG | 5 cut(s) | 132, 1751, 1917, 2049, 2354 |
| BmrI | ACTGGG | 1 cut(s) | 2827 |
| BmtI | GCTAGC | 1 cut(s) | 1772 |
| BmuI | ACTGGG | 1 cut(s) | 2827 |
| BpiI | GAAGAC | 2 cut(s) | 1470, 2182 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 74, 106, 2395, 2427 |
| BpmI | CTGGAG | 1 cut(s) | 1916 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1432 |
| BpuEI | CTTGAG | 1 cut(s) | 1580 |
| BpuMI | CCSGG | 2 cut(s) | 132, 2049 |
| BsaAI | YACGTR | 1 cut(s) | 1248 |
| BsaBI | GATNNNNATC | 1 cut(s) | 30 |
| BsaHI | GRCGYC | 2 cut(s) | 1730, 1847 |
| BsaI | GGTCTC | 2 cut(s) | 2343, 2488 |
| BsaJI | CCNNGG | 3 cut(s) | 153, 737, 1596 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1085, 1115, 2643, 2673 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 137, 675, 1341, 2263, 2498, 2785 |
| Bse1I | ACTGG | 8 cut(s) | 275, 773, 1021, 1330, 1938, 1964, 2439, 2822 |
| Bse21I | CCTNAGG | 1 cut(s) | 609 |
| Bse3DI | GCAATG | 1 cut(s) | 44 |
| Bse8I | GATNNNNATC | 1 cut(s) | 30 |
| BseBI | CCWGG | 3 cut(s) | 1751, 1917, 2354 |
| BseDI | CCNNGG | 3 cut(s) | 153, 737, 1596 |
| BseJI | GATNNNNATC | 1 cut(s) | 30 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 137, 675, 1341, 2263, 2498, 2785 |
| BseMI | GCAATG | 1 cut(s) | 44 |
| BseMII | CTCAG | 3 cut(s) | 623, 755, 2393 |
| BseNI | ACTGG | 8 cut(s) | 275, 773, 1021, 1330, 1938, 1964, 2439, 2822 |
| BseRI | GAGGAG | 2 cut(s) | 597, 1525 |
| BseSI | GKGCMC | 4 cut(s) | 501, 1608, 1639, 2452 |
| BseYI | CCCAGC | 2 cut(s) | 1644, 2672 |
| BsgI | GTGCAG | 1 cut(s) | 972 |
| Bsh1285I | CGRYCG | 1 cut(s) | 938 |
| BshFI | GGCC | 7 cut(s) | 427, 439, 892, 2567, 2600, 2892, 2984 |
| BshNI | GGYRCC | 4 cut(s) | 1268, 1625, 2335, 2725 |
| BsiEI | CGRYCG | 1 cut(s) | 938 |
| BsiHKAI | GWGCWC | 4 cut(s) | 177, 501, 508, 1566 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1941 |
| BsiSI | CCGG | 3 cut(s) | 131, 440, 2049 |
| BslFI | GGGAC | 1 cut(s) | 539 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 137, 675, 1341, 2263, 2498, 2785 |
| BsmAI | GTCTC | 2 cut(s) | 2343, 2488 |
| BsmFI | GGGAC | 1 cut(s) | 539 |
| BsmI | GAATGC | 2 cut(s) | 2143, 3109 |
| BsnI | GGCC | 7 cut(s) | 427, 439, 892, 2567, 2600, 2892, 2984 |
| Bso31I | GGTCTC | 2 cut(s) | 2343, 2488 |
| BsoBI | CYCGRG | 1 cut(s) | 1941 |
| Bsp1286I | GDGCHC | 7 cut(s) | 177, 501, 508, 1566, 1608, 1639, 2452 |
| Bsp1407I | TGTACA | 1 cut(s) | 380 |
| Bsp19I | CCATGG | 2 cut(s) | 737, 1596 |
| BspACI | CCGC | 5 cut(s) | 60, 88, 570, 1610, 1772 |
| BspANI | GGCC | 7 cut(s) | 427, 439, 892, 2567, 2600, 2892, 2984 |
| BspCNI | CTCAG | 3 cut(s) | 622, 756, 2394 |
| BspHI | TCATGA | 1 cut(s) | 1483 |
| BspLI | GGNNCC | 9 cut(s) | 72, 555, 891, 1270, 1627, 2256, 2337, 2566, 2727 |
| BspMAI | CTGCAG | 1 cut(s) | 1634 |
| BspMI | ACCTGC | 3 cut(s) | 404, 1775, 2864 |
| BspOI | GCTAGC | 1 cut(s) | 1772 |
| BspPI | GGATC | 7 cut(s) | 356, 782, 1825, 1856, 2017, 2025, 2981 |
| BspQI | GCTCTTC | 2 cut(s) | 528, 2370 |
| BspT107I | GGYRCC | 4 cut(s) | 1268, 1625, 2335, 2725 |
| BspTNI | GGTCTC | 2 cut(s) | 2343, 2488 |
| BsrBI | CCGCTC | 1 cut(s) | 90 |
| BsrDI | GCAATG | 1 cut(s) | 44 |
| BsrGI | TGTACA | 1 cut(s) | 380 |
| BsrI | ACTGG | 8 cut(s) | 275, 773, 1021, 1330, 1938, 1964, 2439, 2822 |
| BssECI | CCNNGG | 3 cut(s) | 153, 737, 1596 |
| BssNAI | GTATAC | 1 cut(s) | 1925 |
| BssNI | GRCGYC | 2 cut(s) | 1730, 1847 |
| BssSI | CACGAG | 1 cut(s) | 80 |
| BssT1I | CCWWGG | 3 cut(s) | 153, 737, 1596 |
| Bst1107I | GTATAC | 1 cut(s) | 1925 |
| Bst2BI | CACGAG | 1 cut(s) | 80 |
| Bst2UI | CCWGG | 3 cut(s) | 1751, 1917, 2354 |
| Bst4CI | ACNGT | 7 cut(s) | 550, 1258, 1953, 2466, 2722, 3063, 3127 |
| Bst6I | CTCTTC | 3 cut(s) | 528, 2370, 2943 |
| BstACI | GRCGYC | 2 cut(s) | 1730, 1847 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 43 |
| BstAUI | TGTACA | 1 cut(s) | 380 |
| BstBAI | YACGTR | 1 cut(s) | 1248 |
| BstC8I | GCNNGC | 5 cut(s) | 1630, 1770, 2190, 2378, 2868 |
| BstDEI | CTNAG | 7 cut(s) | 509, 609, 764, 1432, 1527, 2369, 2402 |
| BstDSI | CCRYGG | 2 cut(s) | 737, 1596 |
| BstHHI | GCGC | 3 cut(s) | 192, 336, 2376 |
| BstMAI | GTCTC | 2 cut(s) | 2343, 2488 |
| BstMCI | CGRYCG | 1 cut(s) | 938 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 43, 187, 410, 719, 898, 1586, 1634, 1781, 2165 |
| BstNI | CCWGG | 3 cut(s) | 1751, 1917, 2354 |
| BstNSI | RCATGY | 4 cut(s) | 1513, 1843, 2380, 2870 |
| BstSCI | CCNGG | 5 cut(s) | 130, 1749, 1915, 2047, 2352 |
| BstSFI | CTRYAG | 2 cut(s) | 399, 1630 |
| BstSLI | GKGCMC | 4 cut(s) | 501, 1608, 1639, 2452 |
| BstV2I | GAAGAC | 2 cut(s) | 1470, 2182 |
| BstX2I | RGATCY | 3 cut(s) | 787, 1714, 2017 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 435 |
| BstYI | RGATCY | 3 cut(s) | 787, 1714, 2017 |
| BstZ17I | GTATAC | 1 cut(s) | 1925 |
| Bsu36I | CCTNAGG | 1 cut(s) | 609 |
| BsuRI | GGCC | 7 cut(s) | 427, 439, 892, 2567, 2600, 2892, 2984 |
| BtgI | CCRYGG | 2 cut(s) | 737, 1596 |
| BtgZI | GCGATG | 2 cut(s) | 297, 2067 |
| BtsI | GCAGTG | 2 cut(s) | 708, 1763 |
| BtsIMutI | CAGTG | 9 cut(s) | 268, 708, 780, 1465, 1763, 1931, 2019, 2720, 2727 |
| BveI | ACCTGC | 3 cut(s) | 404, 1775, 2864 |
| Cac8I | GCNNGC | 5 cut(s) | 1630, 1770, 2190, 2378, 2868 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3085 |
| CciI | TCATGA | 1 cut(s) | 1483 |
| CfoI | GCGC | 3 cut(s) | 192, 336, 2376 |
| Cfr13I | GGNCC | 7 cut(s) | 70, 85, 553, 890, 2254, 2538, 2565 |
| CseI | GACGC | 3 cut(s) | 568, 1719, 1836 |
| CsiI | ACCWGGT | 2 cut(s) | 1749, 2352 |
| Csp6I | GTAC | 4 cut(s) | 381, 1254, 1754, 2438 |
| CviQI | GTAC | 4 cut(s) | 381, 1254, 1754, 2438 |
| DdeI | CTNAG | 7 cut(s) | 509, 609, 764, 1432, 1527, 2369, 2402 |
| EaeI | YGGCCR | 4 cut(s) | 425, 437, 2890, 2982 |
| Eam1104I | CTCTTC | 3 cut(s) | 528, 2370, 2943 |
| EarI | CTCTTC | 3 cut(s) | 528, 2370, 2943 |
| Ecl136II | GAGCTC | 2 cut(s) | 175, 506 |
| Eco130I | CCWWGG | 3 cut(s) | 153, 737, 1596 |
| Eco24I | GRGCYC | 2 cut(s) | 177, 508 |
| Eco31I | GGTCTC | 2 cut(s) | 2343, 2488 |
| Eco32I | GATATC | 1 cut(s) | 198 |
| Eco47I | GGWCC | 5 cut(s) | 70, 85, 553, 2254, 2538 |
| Eco53kI | GAGCTC | 2 cut(s) | 175, 506 |
| Eco81I | CCTNAGG | 1 cut(s) | 609 |
| Eco88I | CYCGRG | 1 cut(s) | 1941 |
| EcoICRI | GAGCTC | 2 cut(s) | 175, 506 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2565 |
| EcoRII | CCWGG | 3 cut(s) | 1749, 1915, 2352 |
| EcoRV | GATATC | 1 cut(s) | 198 |
| EcoT14I | CCWWGG | 3 cut(s) | 153, 737, 1596 |
| EcoT22I | ATGCAT | 2 cut(s) | 2767, 2868 |
| EcoT38I | GRGCYC | 2 cut(s) | 177, 508 |
| ErhI | CCWWGG | 3 cut(s) | 153, 737, 1596 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 93, 125, 2172, 2204 |
| FaqI | GGGAC | 1 cut(s) | 539 |
| FauI | CCCGC | 2 cut(s) | 577, 1617 |
| FbaI | TGATCA | 4 cut(s) | 1542, 2119, 2710, 3067 |
| FblI | GTMKAC | 1 cut(s) | 1924 |
| FriOI | GRGCYC | 2 cut(s) | 177, 508 |
| FspBI | CTAG | 8 cut(s) | 182, 233, 1004, 1445, 1769, 2169, 2616, 2796 |
| FspI | TGCGCA | 1 cut(s) | 335 |
| GlaI | GCGC | 3 cut(s) | 191, 335, 2375 |
| GsaI | CCCAGC | 2 cut(s) | 1648, 2676 |
| GsuI | CTGGAG | 1 cut(s) | 1916 |
| HaeIII | GGCC | 7 cut(s) | 427, 439, 892, 2567, 2600, 2892, 2984 |
| HapII | CCGG | 3 cut(s) | 131, 440, 2049 |
| HgaI | GACGC | 3 cut(s) | 568, 1719, 1836 |
| HhaI | GCGC | 3 cut(s) | 192, 336, 2376 |
| Hin1I | GRCGYC | 2 cut(s) | 1730, 1847 |
| Hin6I | GCGC | 3 cut(s) | 190, 334, 2374 |
| HinP1I | GCGC | 3 cut(s) | 190, 334, 2374 |
| HincII | GTYRAC | 1 cut(s) | 1041 |
| HindII | GTYRAC | 1 cut(s) | 1041 |
| HpaII | CCGG | 3 cut(s) | 131, 440, 2049 |
| HphI | GGTGA | 7 cut(s) | 691, 1252, 1953, 2035, 2071, 2213, 2564 |
| Hpy166II | GTNNAC | 8 cut(s) | 499, 535, 1041, 1220, 1701, 1925, 2440, 2718 |
| Hpy8I | GTNNAC | 8 cut(s) | 499, 535, 1041, 1220, 1701, 1925, 2440, 2718 |
| Hpy99I | CGWCG | 1 cut(s) | 562 |
| HpyAV | CCTTC | 6 cut(s) | 254, 272, 316, 941, 1451, 2217 |
| HpyCH4III | ACNGT | 7 cut(s) | 550, 1258, 1953, 2466, 2722, 3063, 3127 |
| HpyCH4IV | ACGT | 3 cut(s) | 1247, 1294, 2882 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 43, 187, 410, 719, 898, 1586, 1634, 1781, 2165 |
| HpyF3I | CTNAG | 7 cut(s) | 509, 609, 764, 1432, 1527, 2369, 2402 |
| HpySE526I | ACGT | 3 cut(s) | 1247, 1294, 2882 |
| Hsp92I | GRCGYC | 2 cut(s) | 1730, 1847 |
| HspAI | GCGC | 3 cut(s) | 190, 334, 2374 |
| Ksp22I | TGATCA | 4 cut(s) | 1542, 2119, 2710, 3067 |
| LguI | GCTCTTC | 2 cut(s) | 528, 2370 |
| LmnI | GCTCC | 7 cut(s) | 172, 503, 801, 1653, 1918, 2050, 2292 |
| MabI | ACCWGGT | 2 cut(s) | 1749, 2352 |
| MaeI | CTAG | 8 cut(s) | 182, 233, 1004, 1445, 1769, 2169, 2616, 2796 |
| MaeII | ACGT | 3 cut(s) | 1247, 1294, 2882 |
| MaeIII | GTNAC | 6 cut(s) | 1547, 1848, 2023, 2581, 2813, 2878 |
| MbiI | CCGCTC | 1 cut(s) | 90 |
| MfeI | CAATTG | 8 cut(s) | 49, 594, 648, 942, 1590, 1776, 1884, 2919 |
| MflI | RGATCY | 3 cut(s) | 787, 1714, 2017 |
| MhlI | GDGCHC | 7 cut(s) | 177, 501, 508, 1566, 1608, 1639, 2452 |
| MlsI | TGGCCA | 2 cut(s) | 427, 2892 |
| MluNI | TGGCCA | 2 cut(s) | 427, 2892 |
| MlyI | GAGTC | 3 cut(s) | 775, 2677, 3091 |
| MmeI | TCCRAC | 1 cut(s) | 2516 |
| Mox20I | TGGCCA | 2 cut(s) | 427, 2892 |
| Mph1103I | ATGCAT | 2 cut(s) | 2767, 2868 |
| MscI | TGGCCA | 2 cut(s) | 427, 2892 |
| MslI | CAYNNNNRTG | 3 cut(s) | 809, 1601, 2445 |
| Msp20I | TGGCCA | 2 cut(s) | 427, 2892 |
| MspI | CCGG | 3 cut(s) | 131, 440, 2049 |
| MspR9I | CCNGG | 5 cut(s) | 132, 1751, 1917, 2049, 2354 |
| MunI | CAATTG | 8 cut(s) | 49, 594, 648, 942, 1590, 1776, 1884, 2919 |
| Mva1269I | GAATGC | 2 cut(s) | 2143, 3109 |
| MvaI | CCWGG | 3 cut(s) | 1751, 1917, 2354 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 43, 187, 410, 719, 898, 1586, 1634, 1781, 2165 |
| NciI | CCSGG | 2 cut(s) | 132, 2049 |
| NcoI | CCATGG | 2 cut(s) | 737, 1596 |
| NheI | GCTAGC | 1 cut(s) | 1768 |
| NlaIV | GGNNCC | 9 cut(s) | 72, 555, 891, 1270, 1627, 2256, 2337, 2566, 2727 |
| NmeAIII | GCCGAG | 1 cut(s) | 3049 |
| NmuCI | GTSAC | 5 cut(s) | 1547, 1848, 2023, 2581, 2813 |
| NsbI | TGCGCA | 1 cut(s) | 335 |
| NsiI | ATGCAT | 2 cut(s) | 2767, 2868 |
| NspI | RCATGY | 4 cut(s) | 1513, 1843, 2380, 2870 |
| OliI | CACNNNNGTG | 1 cut(s) | 2445 |
| PaeI | GCATGC | 2 cut(s) | 2380, 2870 |
| PagI | TCATGA | 1 cut(s) | 1483 |
| PaqCI | CACCTGC | 1 cut(s) | 2864 |
| PciI | ACATGT | 1 cut(s) | 1839 |
| PciSI | GCTCTTC | 2 cut(s) | 528, 2370 |
| PctI | GAATGC | 2 cut(s) | 2143, 3109 |
| PflFI | GACNNNGTC | 1 cut(s) | 2354 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1341, 2498 |
| Ple19I | CGATCG | 1 cut(s) | 938 |
| PleI | GAGTC | 3 cut(s) | 774, 2677, 3090 |
| PpsI | GAGTC | 3 cut(s) | 774, 2677, 3090 |
| Ppu21I | YACGTR | 1 cut(s) | 1248 |
| PscI | ACATGT | 1 cut(s) | 1839 |
| PshBI | ATTAAT | 3 cut(s) | 716, 1673, 3003 |
| Psp124BI | GAGCTC | 2 cut(s) | 177, 508 |
| Psp6I | CCWGG | 3 cut(s) | 1749, 1915, 2352 |
| PspFI | CCCAGC | 2 cut(s) | 1644, 2672 |
| PspGI | CCWGG | 3 cut(s) | 1749, 1915, 2352 |
| PspN4I | GGNNCC | 9 cut(s) | 72, 555, 891, 1270, 1627, 2256, 2337, 2566, 2727 |
| PspPI | GGNCC | 7 cut(s) | 70, 85, 553, 890, 2254, 2538, 2565 |
| PstI | CTGCAG | 1 cut(s) | 1634 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3085 |
| PsuI | RGATCY | 3 cut(s) | 787, 1714, 2017 |
| PsyI | GACNNNGTC | 1 cut(s) | 2354 |
| PvuI | CGATCG | 1 cut(s) | 938 |
| RsaI | GTAC | 4 cut(s) | 382, 1255, 1755, 2439 |
| RsaNI | GTAC | 4 cut(s) | 381, 1254, 1754, 2438 |
| RseI | CAYNNNNRTG | 3 cut(s) | 809, 1601, 2445 |
| SacI | GAGCTC | 2 cut(s) | 177, 508 |
| SapI | GCTCTTC | 2 cut(s) | 528, 2370 |
| Sau96I | GGNCC | 7 cut(s) | 70, 85, 553, 890, 2254, 2538, 2565 |
| SbfI | CCTGCAGG | 1 cut(s) | 1634 |
| SchI | GAGTC | 3 cut(s) | 775, 2677, 3091 |
| ScrFI | CCNGG | 5 cut(s) | 132, 1751, 1917, 2049, 2354 |
| SdaI | CCTGCAGG | 1 cut(s) | 1634 |
| SduI | GDGCHC | 7 cut(s) | 177, 501, 508, 1566, 1608, 1639, 2452 |
| SexAI | ACCWGGT | 2 cut(s) | 1749, 2352 |
| SfcI | CTRYAG | 2 cut(s) | 399, 1630 |
| SinI | GGWCC | 5 cut(s) | 70, 85, 553, 2254, 2538 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 809, 1601, 2445 |
| SmlI | CTYRAG | 1 cut(s) | 1559 |
| SmoI | CTYRAG | 1 cut(s) | 1559 |
| SphI | GCATGC | 2 cut(s) | 2380, 2870 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1634 |
| SsiI | CCGC | 5 cut(s) | 60, 88, 570, 1610, 1772 |
| SspI | AATATT | 1 cut(s) | 626 |
| SspMI | CTAG | 8 cut(s) | 182, 233, 1004, 1445, 1769, 2169, 2616, 2796 |
| SstI | GAGCTC | 2 cut(s) | 177, 508 |
| StyD4I | CCNGG | 5 cut(s) | 130, 1749, 1915, 2047, 2352 |
| StyI | CCWWGG | 3 cut(s) | 153, 737, 1596 |
| TaaI | ACNGT | 7 cut(s) | 550, 1258, 1953, 2466, 2722, 3063, 3127 |
| TaiI | ACGT | 3 cut(s) | 1250, 1297, 2885 |
| TaqI | TCGA | 3 cut(s) | 24, 2347, 2431 |
| TatI | WGTACW | 1 cut(s) | 380 |
| TauI | GCSGC | 1 cut(s) | 1775 |
| TscAI | CASTG | 9 cut(s) | 275, 715, 780, 1465, 1770, 1938, 2019, 2720, 2727 |
| TseFI | GTSAC | 5 cut(s) | 1547, 1848, 2023, 2581, 2813 |
| Tsp45I | GTSAC | 5 cut(s) | 1547, 1848, 2023, 2581, 2813 |
| TspGWI | ACGGA | 5 cut(s) | 516, 716, 1145, 1528, 1566 |
| TspRI | CASTG | 9 cut(s) | 275, 715, 780, 1465, 1770, 1938, 2019, 2720, 2727 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2354 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1341, 2498 |
| VneI | GTGCAC | 1 cut(s) | 497 |
| VpaK11BI | GGWCC | 5 cut(s) | 70, 85, 553, 2254, 2538 |
| VspI | ATTAAT | 3 cut(s) | 716, 1673, 3003 |
| XapI | RAATTY | 3 cut(s) | 847, 872, 3037 |
| XbaI | TCTAGA | 1 cut(s) | 1444 |
| XceI | RCATGY | 4 cut(s) | 1513, 1843, 2380, 2870 |
| XmiI | GTMKAC | 1 cut(s) | 1924 |
| XspI | CTAG | 8 cut(s) | 182, 233, 1004, 1445, 1769, 2169, 2616, 2796 |
| Zsp2I | ATGCAT | 2 cut(s) | 2767, 2868 |