Importin-9
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26170 |
| fragaria_vesca | FvH4_4g28521 FvH4_4g28521 |
| malus_domestica | MD16G1051700.v1.1 |
| prunus_persica | Prupe.1G300500_v2.0.a1 |
| pyrus_communis | pycom16g04540 |
| rosa_chinensis | RchiOBHm_Chr4g0436541 |
| rosa_laevigata | RLG00000006510 |
| rosa_roxburghii | Rroxscaffold_5G00377650 |
| rosa_rugosa | Rorug04G0294700 |
| rosa_samantha | Rh4AG349000 Rh4BG357600 Rh4CG372000 Rh4DG351600 |
| rosa_wichuraiana | Rw4G030530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 314 |
| Acc36I | ACCTGC | 2 cut(s) | 383, 1754 |
| AccB1I | GGYRCC | 4 cut(s) | 1247, 1604, 2314, 2704 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 137, 1320, 2477 |
| AccBSI | CCGCTC | 1 cut(s) | 90 |
| AccI | GTMKAC | 1 cut(s) | 1903 |
| AciI | CCGC | 5 cut(s) | 60, 88, 549, 1589, 1751 |
| AclWI | GGATC | 7 cut(s) | 335, 761, 1804, 1835, 1996, 2004, 2807 |
| AcoI | YGGCCR | 2 cut(s) | 404, 416 |
| AcsI | RAATTY | 3 cut(s) | 826, 851, 2863 |
| AcyI | GRCGYC | 2 cut(s) | 1709, 1826 |
| AfaI | GTAC | 4 cut(s) | 361, 1234, 1734, 2418 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 137, 654, 1320, 2242, 2477, 2764 |
| AflIII | ACRYGT | 3 cut(s) | 1226, 1271, 1818 |
| AjnI | CCWGG | 4 cut(s) | 130, 1728, 1894, 2331 |
| AleI | CACNNNNGTG | 1 cut(s) | 2424 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1443, 1475, 2622, 2654 |
| Alw21I | GWGCWC | 4 cut(s) | 177, 480, 487, 1545 |
| Alw26I | GTCTC | 2 cut(s) | 2322, 2467 |
| Alw44I | GTGCAC | 1 cut(s) | 476 |
| AlwI | GGATC | 7 cut(s) | 335, 761, 1804, 1835, 1996, 2004, 2807 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2911 |
| Ama87I | CYCGRG | 1 cut(s) | 1920 |
| AoxI | GGCC | 5 cut(s) | 404, 416, 869, 2544, 2577 |
| ApaLI | GTGCAC | 1 cut(s) | 476 |
| ApeKI | GCWGC | 9 cut(s) | 43, 161, 215, 1262, 1556, 1966, 2135, 2216, 2648 |
| ApoI | RAATTY | 3 cut(s) | 826, 851, 2863 |
| AseI | ATTAAT | 3 cut(s) | 695, 1652, 2829 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 815 |
| AspLEI | GCGC | 3 cut(s) | 192, 315, 2355 |
| AspS9I | GGNCC | 6 cut(s) | 85, 532, 869, 2233, 2517, 2544 |
| AsuC2I | CCSGG | 1 cut(s) | 2028 |
| AsuHPI | GGTGA | 6 cut(s) | 670, 1231, 2014, 2050, 2192, 2543 |
| AsuNHI | GCTAGC | 1 cut(s) | 1747 |
| AvaI | CYCGRG | 1 cut(s) | 1920 |
| AvaII | GGWCC | 4 cut(s) | 85, 532, 2233, 2517 |
| AxyI | CCTNAGG | 1 cut(s) | 588 |
| BaeGI | GKGCMC | 4 cut(s) | 480, 1587, 1618, 2431 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 516, 549, 561, 594 |
| BalI | TGGCCA | 1 cut(s) | 406 |
| BanI | GGYRCC | 4 cut(s) | 1247, 1604, 2314, 2704 |
| BanII | GRGCYC | 2 cut(s) | 177, 487 |
| BauI | CACGAG | 1 cut(s) | 80 |
| BbsI | GAAGAC | 2 cut(s) | 1449, 2161 |
| Bbv12I | GWGCWC | 4 cut(s) | 177, 480, 487, 1545 |
| BbvI | GCAGC | 9 cut(s) | 30, 148, 202, 1249, 1543, 1978, 2122, 2228, 2635 |
| BccI | CCATC | 8 cut(s) | 941, 959, 1259, 1967, 2060, 2311, 2471, 2774 |
| BceAI | ACGGC | 1 cut(s) | 632 |
| BciT130I | CCWGG | 4 cut(s) | 132, 1730, 1896, 2333 |
| BclI | TGATCA | 3 cut(s) | 1521, 2689, 2893 |
| BcnI | CCSGG | 1 cut(s) | 2028 |
| BcoDI | GTCTC | 2 cut(s) | 2322, 2467 |
| BfaI | CTAG | 6 cut(s) | 182, 983, 1424, 1748, 2148, 2595 |
| BfmI | CTRYAG | 2 cut(s) | 378, 1609 |
| BfuAI | ACCTGC | 2 cut(s) | 383, 1754 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 877, 1613 |
| BglII | AGATCT | 1 cut(s) | 1693 |
| Bme1390I | CCNGG | 5 cut(s) | 132, 1730, 1896, 2028, 2333 |
| Bme18I | GGWCC | 4 cut(s) | 85, 532, 2233, 2517 |
| BmeT110I | CYCGRG | 1 cut(s) | 1920 |
| BmgT120I | GGNCC | 6 cut(s) | 85, 532, 869, 2233, 2517, 2544 |
| BmiI | GGNNCC | 8 cut(s) | 534, 870, 1249, 1606, 2235, 2316, 2545, 2706 |
| BmrFI | CCNGG | 5 cut(s) | 132, 1730, 1896, 2028, 2333 |
| BmtI | GCTAGC | 1 cut(s) | 1751 |
| BpiI | GAAGAC | 2 cut(s) | 1449, 2161 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 74, 106, 2374, 2406 |
| BpmI | CTGGAG | 1 cut(s) | 1895 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1411 |
| BpuEI | CTTGAG | 1 cut(s) | 1559 |
| BpuMI | CCSGG | 1 cut(s) | 2028 |
| BsaAI | YACGTR | 1 cut(s) | 1227 |
| BsaBI | GATNNNNATC | 1 cut(s) | 30 |
| BsaHI | GRCGYC | 2 cut(s) | 1709, 1826 |
| BsaI | GGTCTC | 2 cut(s) | 2322, 2467 |
| BsaJI | CCNNGG | 3 cut(s) | 153, 716, 1575 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1064, 1094, 2622, 2652 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 137, 654, 1320, 2242, 2477, 2764 |
| Bse1I | ACTGG | 7 cut(s) | 254, 752, 1000, 1309, 1917, 1943, 2418 |
| Bse21I | CCTNAGG | 1 cut(s) | 588 |
| Bse3DI | GCAATG | 1 cut(s) | 44 |
| Bse8I | GATNNNNATC | 1 cut(s) | 30 |
| BseBI | CCWGG | 4 cut(s) | 132, 1730, 1896, 2333 |
| BseDI | CCNNGG | 3 cut(s) | 153, 716, 1575 |
| BseJI | GATNNNNATC | 1 cut(s) | 30 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 137, 654, 1320, 2242, 2477, 2764 |
| BseMI | GCAATG | 1 cut(s) | 44 |
| BseMII | CTCAG | 3 cut(s) | 602, 734, 2372 |
| BseNI | ACTGG | 7 cut(s) | 254, 752, 1000, 1309, 1917, 1943, 2418 |
| BseRI | GAGGAG | 2 cut(s) | 576, 1504 |
| BseSI | GKGCMC | 4 cut(s) | 480, 1587, 1618, 2431 |
| BseXI | GCAGC | 9 cut(s) | 30, 148, 202, 1249, 1543, 1978, 2122, 2228, 2635 |
| BseYI | CCCAGC | 2 cut(s) | 1623, 2651 |
| BsgI | GTGCAG | 1 cut(s) | 951 |
| Bsh1285I | CGRYCG | 1 cut(s) | 917 |
| BshFI | GGCC | 5 cut(s) | 406, 418, 871, 2546, 2579 |
| BshNI | GGYRCC | 4 cut(s) | 1247, 1604, 2314, 2704 |
| BsiEI | CGRYCG | 1 cut(s) | 917 |
| BsiHKAI | GWGCWC | 4 cut(s) | 177, 480, 487, 1545 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1920 |
| BsiSI | CCGG | 2 cut(s) | 419, 2028 |
| BslFI | GGGAC | 1 cut(s) | 518 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 137, 654, 1320, 2242, 2477, 2764 |
| BsmAI | GTCTC | 2 cut(s) | 2322, 2467 |
| BsmFI | GGGAC | 1 cut(s) | 518 |
| BsmI | GAATGC | 2 cut(s) | 2122, 2935 |
| BsnI | GGCC | 5 cut(s) | 406, 418, 871, 2546, 2579 |
| Bso31I | GGTCTC | 2 cut(s) | 2322, 2467 |
| BsoBI | CYCGRG | 1 cut(s) | 1920 |
| Bsp1286I | GDGCHC | 7 cut(s) | 177, 480, 487, 1545, 1587, 1618, 2431 |
| Bsp1407I | TGTACA | 1 cut(s) | 359 |
| Bsp19I | CCATGG | 2 cut(s) | 716, 1575 |
| BspACI | CCGC | 5 cut(s) | 60, 88, 549, 1589, 1751 |
| BspANI | GGCC | 5 cut(s) | 406, 418, 871, 2546, 2579 |
| BspCNI | CTCAG | 3 cut(s) | 601, 735, 2373 |
| BspHI | TCATGA | 1 cut(s) | 1462 |
| BspLI | GGNNCC | 8 cut(s) | 534, 870, 1249, 1606, 2235, 2316, 2545, 2706 |
| BspMAI | CTGCAG | 1 cut(s) | 1613 |
| BspMI | ACCTGC | 2 cut(s) | 383, 1754 |
| BspOI | GCTAGC | 1 cut(s) | 1751 |
| BspPI | GGATC | 7 cut(s) | 335, 761, 1804, 1835, 1996, 2004, 2807 |
| BspQI | GCTCTTC | 2 cut(s) | 507, 2349 |
| BspT107I | GGYRCC | 4 cut(s) | 1247, 1604, 2314, 2704 |
| BspTNI | GGTCTC | 2 cut(s) | 2322, 2467 |
| BsrBI | CCGCTC | 1 cut(s) | 90 |
| BsrDI | GCAATG | 1 cut(s) | 44 |
| BsrGI | TGTACA | 1 cut(s) | 359 |
| BsrI | ACTGG | 7 cut(s) | 254, 752, 1000, 1309, 1917, 1943, 2418 |
| BssECI | CCNNGG | 3 cut(s) | 153, 716, 1575 |
| BssNAI | GTATAC | 1 cut(s) | 1904 |
| BssNI | GRCGYC | 2 cut(s) | 1709, 1826 |
| BssSI | CACGAG | 1 cut(s) | 80 |
| BssT1I | CCWWGG | 3 cut(s) | 153, 716, 1575 |
| Bst1107I | GTATAC | 1 cut(s) | 1904 |
| Bst2BI | CACGAG | 1 cut(s) | 80 |
| Bst2UI | CCWGG | 4 cut(s) | 132, 1730, 1896, 2333 |
| Bst4CI | ACNGT | 6 cut(s) | 529, 1932, 2445, 2701, 2889, 2953 |
| Bst6I | CTCTTC | 3 cut(s) | 507, 2349, 2769 |
| BstACI | GRCGYC | 2 cut(s) | 1709, 1826 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 43 |
| BstAUI | TGTACA | 1 cut(s) | 359 |
| BstBAI | YACGTR | 1 cut(s) | 1227 |
| BstC8I | GCNNGC | 4 cut(s) | 1609, 1749, 2169, 2357 |
| BstDEI | CTNAG | 7 cut(s) | 488, 588, 743, 1411, 1506, 2348, 2381 |
| BstDSI | CCRYGG | 2 cut(s) | 716, 1575 |
| BstHHI | GCGC | 3 cut(s) | 192, 315, 2355 |
| BstMAI | GTCTC | 2 cut(s) | 2322, 2467 |
| BstMCI | CGRYCG | 1 cut(s) | 917 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 43, 187, 389, 698, 877, 1565, 1613, 1760, 2144 |
| BstNI | CCWGG | 4 cut(s) | 132, 1730, 1896, 2333 |
| BstNSI | RCATGY | 3 cut(s) | 1492, 1822, 2359 |
| BstSCI | CCNGG | 5 cut(s) | 130, 1728, 1894, 2026, 2331 |
| BstSFI | CTRYAG | 2 cut(s) | 378, 1609 |
| BstSLI | GKGCMC | 4 cut(s) | 480, 1587, 1618, 2431 |
| BstV1I | GCAGC | 9 cut(s) | 30, 148, 202, 1249, 1543, 1978, 2122, 2228, 2635 |
| BstV2I | GAAGAC | 2 cut(s) | 1449, 2161 |
| BstX2I | RGATCY | 3 cut(s) | 766, 1693, 1996 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 414 |
| BstYI | RGATCY | 3 cut(s) | 766, 1693, 1996 |
| BstZ17I | GTATAC | 1 cut(s) | 1904 |
| Bsu36I | CCTNAGG | 1 cut(s) | 588 |
| BsuRI | GGCC | 5 cut(s) | 406, 418, 871, 2546, 2579 |
| BtgI | CCRYGG | 2 cut(s) | 716, 1575 |
| BtgZI | GCGATG | 2 cut(s) | 276, 2046 |
| BtsI | GCAGTG | 2 cut(s) | 687, 1742 |
| BtsIMutI | CAGTG | 9 cut(s) | 247, 687, 759, 1444, 1742, 1910, 1998, 2699, 2706 |
| BveI | ACCTGC | 2 cut(s) | 383, 1754 |
| Cac8I | GCNNGC | 4 cut(s) | 1609, 1749, 2169, 2357 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2911 |
| CciI | TCATGA | 1 cut(s) | 1462 |
| CfoI | GCGC | 3 cut(s) | 192, 315, 2355 |
| Cfr13I | GGNCC | 6 cut(s) | 85, 532, 869, 2233, 2517, 2544 |
| CseI | GACGC | 3 cut(s) | 547, 1698, 1815 |
| CsiI | ACCWGGT | 3 cut(s) | 130, 1728, 2331 |
| Csp6I | GTAC | 4 cut(s) | 360, 1233, 1733, 2417 |
| CviAII | CATG | 9 cut(s) | 561, 639, 717, 1463, 1489, 1529, 1576, 1819, 2356 |
| CviQI | GTAC | 4 cut(s) | 360, 1233, 1733, 2417 |
| DdeI | CTNAG | 7 cut(s) | 488, 588, 743, 1411, 1506, 2348, 2381 |
| EaeI | YGGCCR | 2 cut(s) | 404, 416 |
| Eam1104I | CTCTTC | 3 cut(s) | 507, 2349, 2769 |
| EarI | CTCTTC | 3 cut(s) | 507, 2349, 2769 |
| Ecl136II | GAGCTC | 2 cut(s) | 175, 485 |
| Eco130I | CCWWGG | 3 cut(s) | 153, 716, 1575 |
| Eco24I | GRGCYC | 2 cut(s) | 177, 487 |
| Eco31I | GGTCTC | 2 cut(s) | 2322, 2467 |
| Eco32I | GATATC | 1 cut(s) | 198 |
| Eco47I | GGWCC | 4 cut(s) | 85, 532, 2233, 2517 |
| Eco53kI | GAGCTC | 2 cut(s) | 175, 485 |
| Eco81I | CCTNAGG | 1 cut(s) | 588 |
| Eco88I | CYCGRG | 1 cut(s) | 1920 |
| EcoICRI | GAGCTC | 2 cut(s) | 175, 485 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2544 |
| EcoRII | CCWGG | 4 cut(s) | 130, 1728, 1894, 2331 |
| EcoRV | GATATC | 1 cut(s) | 198 |
| EcoT14I | CCWWGG | 3 cut(s) | 153, 716, 1575 |
| EcoT22I | ATGCAT | 1 cut(s) | 2746 |
| EcoT38I | GRGCYC | 2 cut(s) | 177, 487 |
| ErhI | CCWWGG | 3 cut(s) | 153, 716, 1575 |
| FaeI | CATG | 9 cut(s) | 564, 642, 720, 1466, 1492, 1532, 1579, 1822, 2359 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 93, 125, 2151, 2183 |
| FaqI | GGGAC | 1 cut(s) | 518 |
| FatI | CATG | 9 cut(s) | 560, 638, 716, 1462, 1488, 1528, 1575, 1818, 2355 |
| FauI | CCCGC | 2 cut(s) | 556, 1596 |
| FbaI | TGATCA | 3 cut(s) | 1521, 2689, 2893 |
| FblI | GTMKAC | 1 cut(s) | 1903 |
| FriOI | GRGCYC | 2 cut(s) | 177, 487 |
| FspBI | CTAG | 6 cut(s) | 182, 983, 1424, 1748, 2148, 2595 |
| FspI | TGCGCA | 1 cut(s) | 314 |
| GlaI | GCGC | 3 cut(s) | 191, 314, 2354 |
| GsaI | CCCAGC | 2 cut(s) | 1627, 2655 |
| GsuI | CTGGAG | 1 cut(s) | 1895 |
| HaeIII | GGCC | 5 cut(s) | 406, 418, 871, 2546, 2579 |
| HapII | CCGG | 2 cut(s) | 419, 2028 |
| HgaI | GACGC | 3 cut(s) | 547, 1698, 1815 |
| HhaI | GCGC | 3 cut(s) | 192, 315, 2355 |
| Hin1I | GRCGYC | 2 cut(s) | 1709, 1826 |
| Hin1II | CATG | 9 cut(s) | 564, 642, 720, 1466, 1492, 1532, 1579, 1822, 2359 |
| Hin6I | GCGC | 3 cut(s) | 190, 313, 2353 |
| HinP1I | GCGC | 3 cut(s) | 190, 313, 2353 |
| HincII | GTYRAC | 1 cut(s) | 1020 |
| HindII | GTYRAC | 1 cut(s) | 1020 |
| HpaII | CCGG | 2 cut(s) | 419, 2028 |
| HphI | GGTGA | 6 cut(s) | 670, 1231, 2014, 2050, 2192, 2543 |
| Hpy166II | GTNNAC | 8 cut(s) | 478, 514, 1020, 1199, 1680, 1904, 2419, 2697 |
| Hpy8I | GTNNAC | 8 cut(s) | 478, 514, 1020, 1199, 1680, 1904, 2419, 2697 |
| Hpy99I | CGWCG | 1 cut(s) | 541 |
| HpyAV | CCTTC | 7 cut(s) | 233, 251, 295, 920, 1232, 1430, 2196 |
| HpyCH4III | ACNGT | 6 cut(s) | 529, 1932, 2445, 2701, 2889, 2953 |
| HpyCH4IV | ACGT | 2 cut(s) | 1226, 1273 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 43, 187, 389, 698, 877, 1565, 1613, 1760, 2144 |
| HpyF3I | CTNAG | 7 cut(s) | 488, 588, 743, 1411, 1506, 2348, 2381 |
| HpySE526I | ACGT | 2 cut(s) | 1226, 1273 |
| Hsp92I | GRCGYC | 2 cut(s) | 1709, 1826 |
| Hsp92II | CATG | 9 cut(s) | 564, 642, 720, 1466, 1492, 1532, 1579, 1822, 2359 |
| HspAI | GCGC | 3 cut(s) | 190, 313, 2353 |
| Ksp22I | TGATCA | 3 cut(s) | 1521, 2689, 2893 |
| LguI | GCTCTTC | 2 cut(s) | 507, 2349 |
| LmnI | GCTCC | 6 cut(s) | 172, 482, 780, 1632, 1897, 2029 |
| Lsp1109I | GCAGC | 9 cut(s) | 30, 148, 202, 1249, 1543, 1978, 2122, 2228, 2635 |
| MabI | ACCWGGT | 3 cut(s) | 130, 1728, 2331 |
| MaeI | CTAG | 6 cut(s) | 182, 983, 1424, 1748, 2148, 2595 |
| MaeII | ACGT | 2 cut(s) | 1226, 1273 |
| MaeIII | GTNAC | 4 cut(s) | 1827, 2002, 2093, 2560 |
| MbiI | CCGCTC | 1 cut(s) | 90 |
| MfeI | CAATTG | 7 cut(s) | 49, 573, 627, 921, 1569, 1755, 1863 |
| MflI | RGATCY | 3 cut(s) | 766, 1693, 1996 |
| MhlI | GDGCHC | 7 cut(s) | 177, 480, 487, 1545, 1587, 1618, 2431 |
| MlsI | TGGCCA | 1 cut(s) | 406 |
| MluNI | TGGCCA | 1 cut(s) | 406 |
| MlyI | GAGTC | 3 cut(s) | 754, 2656, 2917 |
| MmeI | TCCRAC | 1 cut(s) | 2495 |
| Mox20I | TGGCCA | 1 cut(s) | 406 |
| Mph1103I | ATGCAT | 1 cut(s) | 2746 |
| MroXI | GAANNNNTTC | 1 cut(s) | 815 |
| MscI | TGGCCA | 1 cut(s) | 406 |
| MslI | CAYNNNNRTG | 3 cut(s) | 788, 1580, 2424 |
| Msp20I | TGGCCA | 1 cut(s) | 406 |
| MspI | CCGG | 2 cut(s) | 419, 2028 |
| MspR9I | CCNGG | 5 cut(s) | 132, 1730, 1896, 2028, 2333 |
| MunI | CAATTG | 7 cut(s) | 49, 573, 627, 921, 1569, 1755, 1863 |
| Mva1269I | GAATGC | 2 cut(s) | 2122, 2935 |
| MvaI | CCWGG | 4 cut(s) | 132, 1730, 1896, 2333 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 43, 187, 389, 698, 877, 1565, 1613, 1760, 2144 |
| NciI | CCSGG | 1 cut(s) | 2028 |
| NcoI | CCATGG | 2 cut(s) | 716, 1575 |
| NheI | GCTAGC | 1 cut(s) | 1747 |
| NlaIII | CATG | 9 cut(s) | 564, 642, 720, 1466, 1492, 1532, 1579, 1822, 2359 |
| NlaIV | GGNNCC | 8 cut(s) | 534, 870, 1249, 1606, 2235, 2316, 2545, 2706 |
| NmeAIII | GCCGAG | 1 cut(s) | 2875 |
| NmuCI | GTSAC | 4 cut(s) | 1827, 2002, 2093, 2560 |
| NsbI | TGCGCA | 1 cut(s) | 314 |
| NsiI | ATGCAT | 1 cut(s) | 2746 |
| NspI | RCATGY | 3 cut(s) | 1492, 1822, 2359 |
| OliI | CACNNNNGTG | 1 cut(s) | 2424 |
| PaeI | GCATGC | 1 cut(s) | 2359 |
| PagI | TCATGA | 1 cut(s) | 1462 |
| PciI | ACATGT | 1 cut(s) | 1818 |
| PciSI | GCTCTTC | 2 cut(s) | 507, 2349 |
| PctI | GAATGC | 2 cut(s) | 2122, 2935 |
| PdmI | GAANNNNTTC | 1 cut(s) | 815 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 137, 1320, 2477 |
| Ple19I | CGATCG | 1 cut(s) | 917 |
| PleI | GAGTC | 3 cut(s) | 753, 2656, 2916 |
| PpsI | GAGTC | 3 cut(s) | 753, 2656, 2916 |
| Ppu21I | YACGTR | 1 cut(s) | 1227 |
| PscI | ACATGT | 1 cut(s) | 1818 |
| PshBI | ATTAAT | 3 cut(s) | 695, 1652, 2829 |
| Psp124BI | GAGCTC | 2 cut(s) | 177, 487 |
| Psp6I | CCWGG | 4 cut(s) | 130, 1728, 1894, 2331 |
| PspFI | CCCAGC | 2 cut(s) | 1623, 2651 |
| PspGI | CCWGG | 4 cut(s) | 130, 1728, 1894, 2331 |
| PspN4I | GGNNCC | 8 cut(s) | 534, 870, 1249, 1606, 2235, 2316, 2545, 2706 |
| PspPI | GGNCC | 6 cut(s) | 85, 532, 869, 2233, 2517, 2544 |
| PstI | CTGCAG | 1 cut(s) | 1613 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2911 |
| PsuI | RGATCY | 3 cut(s) | 766, 1693, 1996 |
| PvuI | CGATCG | 1 cut(s) | 917 |
| RsaI | GTAC | 4 cut(s) | 361, 1234, 1734, 2418 |
| RsaNI | GTAC | 4 cut(s) | 360, 1233, 1733, 2417 |
| RseI | CAYNNNNRTG | 3 cut(s) | 788, 1580, 2424 |
| SacI | GAGCTC | 2 cut(s) | 177, 487 |
| SapI | GCTCTTC | 2 cut(s) | 507, 2349 |
| Sau96I | GGNCC | 6 cut(s) | 85, 532, 869, 2233, 2517, 2544 |
| SbfI | CCTGCAGG | 1 cut(s) | 1613 |
| SchI | GAGTC | 3 cut(s) | 754, 2656, 2917 |
| ScrFI | CCNGG | 5 cut(s) | 132, 1730, 1896, 2028, 2333 |
| SdaI | CCTGCAGG | 1 cut(s) | 1613 |
| SduI | GDGCHC | 7 cut(s) | 177, 480, 487, 1545, 1587, 1618, 2431 |
| SexAI | ACCWGGT | 3 cut(s) | 130, 1728, 2331 |
| SfcI | CTRYAG | 2 cut(s) | 378, 1609 |
| SinI | GGWCC | 4 cut(s) | 85, 532, 2233, 2517 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 788, 1580, 2424 |
| SmlI | CTYRAG | 1 cut(s) | 1538 |
| SmoI | CTYRAG | 1 cut(s) | 1538 |
| SphI | GCATGC | 1 cut(s) | 2359 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1613 |
| SsiI | CCGC | 5 cut(s) | 60, 88, 549, 1589, 1751 |
| SspI | AATATT | 1 cut(s) | 605 |
| SspMI | CTAG | 6 cut(s) | 182, 983, 1424, 1748, 2148, 2595 |
| SstI | GAGCTC | 2 cut(s) | 177, 487 |
| StyD4I | CCNGG | 5 cut(s) | 130, 1728, 1894, 2026, 2331 |
| StyI | CCWWGG | 3 cut(s) | 153, 716, 1575 |
| TaaI | ACNGT | 6 cut(s) | 529, 1932, 2445, 2701, 2889, 2953 |
| TaiI | ACGT | 2 cut(s) | 1229, 1276 |
| TaqI | TCGA | 5 cut(s) | 24, 69, 2326, 2410, 2811 |
| TatI | WGTACW | 1 cut(s) | 359 |
| TauI | GCSGC | 1 cut(s) | 1754 |
| TscAI | CASTG | 9 cut(s) | 254, 694, 759, 1444, 1749, 1917, 1998, 2699, 2706 |
| TseFI | GTSAC | 4 cut(s) | 1827, 2002, 2093, 2560 |
| TseI | GCWGC | 9 cut(s) | 43, 161, 215, 1262, 1556, 1966, 2135, 2216, 2648 |
| Tsp45I | GTSAC | 4 cut(s) | 1827, 2002, 2093, 2560 |
| TspGWI | ACGGA | 3 cut(s) | 495, 695, 1124 |
| TspRI | CASTG | 9 cut(s) | 254, 694, 759, 1444, 1749, 1917, 1998, 2699, 2706 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 137, 1320, 2477 |
| VneI | GTGCAC | 1 cut(s) | 476 |
| VpaK11BI | GGWCC | 4 cut(s) | 85, 532, 2233, 2517 |
| VspI | ATTAAT | 3 cut(s) | 695, 1652, 2829 |
| XapI | RAATTY | 3 cut(s) | 826, 851, 2863 |
| XbaI | TCTAGA | 1 cut(s) | 1423 |
| XceI | RCATGY | 3 cut(s) | 1492, 1822, 2359 |
| XmiI | GTMKAC | 1 cut(s) | 1903 |
| XmnI | GAANNNNTTC | 1 cut(s) | 815 |
| XspI | CTAG | 6 cut(s) | 182, 983, 1424, 1748, 2148, 2595 |
| Zsp2I | ATGCAT | 1 cut(s) | 2746 |