Prupe.1G332800_v2.0.a1

Histone-lysine n-methyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
31516386 .. 31520261
3876 bp
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UTR
Exon/CDS
Intron
Prupe.1G332800.2

Sequence Viewer

Length: 1446 bp
ATGGCAGCTTCCAAGATGGTAATGGCTTCGCTCACCGCCTTCCGCCCTCTAACTTGCGGTGCCTCAACCTCAACCTCTTATCCTGGGCGATTGGCCCCATACCCACCTGACCTGATCAAGTGGGTTCGTAGGGAAGGAGGGTTCGTGCACGAAGCCGTGAAGATAGCTCAAGATAGTTCCTTTGGTCTTGGACTTGTGGCTTCAGAGGAAATCCCGAAAGGTTCTGAACTAATTGTTCTTCCCGAGCACGTACCGTTGAGATTTGGCTCTCTTGAATCAGAGGGTGGAGATGGTGGGCTTGACTCTGTTATCGTCAATTTGGCTCGCCACGTTCCTGAGGAACTTTGGGCAATGAAATTGGGTTTGAAGCTTCTGCAAGAAAGAGCAAAAACTGGATCCTTCTGGTGGCCATACATCAGCAGCCTCCCTGAAACATTCAATATACCCATCTTCTTCCCTGGCGAGGACATAAAGAATTTGCAGTATGCTCCACTTCTTTACCAGGTGAACAAGAGATGCAGATTTCTTCTTGATTTTGAACAAGAAGTCAAATGTGCTCTGGAAAATTTGAAACCAAATGATCACCCTTTTGGTGGCCAAGCTGTAGATGCATCCTCCCTTGGATGGGCAATGTCAGCAGTTTCGTCTCGGGCATTCCGTTTGTATGGTAAAAAGCTTTCAGGTGAGATCAACAATGATGTCCCGATGATGCTTCCTCTCATCGACATGTGCAACCATAGTTTCAAGCCAAATGCCATAATACTTCAGGACCAAGATGACAGGGACGTGACGATGCTAGTAAAGGTTGTGGCAGAAACAGGGATCAAACAGAACGATTGTTTAGTACTTAACTATGGGTGTTTAAATAATGACCTTTTCCTGCTGGATTATGGATTTGTGATACCATCAAACCCCTATGATTGTATTGAGCTGAAATATGATGGAGCGCTTCTGGATGCTGCAAGTATGGCTGCTGGAGTATCATCACCCAACTTCTCTGCACCATCTCCATGGCAGAAAGAAATTTTATGCCAGCTAAAGTTAGATGGGGAAGCTCCTCTTCTTAAGGTATGCTTAGGGGGTTCGGAGTTGGTGGAGGGGCGCTTGTTGGCAGCCTTAAGAGTTGTTCTTGCCAGTGACATGGAAACAGTTCAGAAGCTTGATTTAGATAAACTTAAATCTATTTCAGTTGAAGCTCCCATTGGTATAGCAAATGAGTTAGCTGCTTTTCGCACCATTATTGCATTATGTGTGATTGCACTGGGACACTTCCCAACCAAAATCATGGAGGATGAGTCCCTGTTGCAAAAGGGTGTTTCAGATTCTACTCAGTTGGCTATCCAGTTCCGAATTGAGAAGAAATCTGTCATTATAGATGTGATGAGAGATCTGACAAGGAGGGTGAAATTACTAGCATCAAAAGAAACAGCCACTGCTCAAGGCTAA

Protein Analysis

482

Amino Acids

52.73

Weight (kDa)

5.31

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015432)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24610
fragaria_vesca FvH4_4g33660
malus_domestica MD13G1020900.v1.1 MD16G1019300.v1.1
prunus_persica Prupe.1G332800_v2.0.a1
pyrus_communis pycom13g01770 pycom16g01730
rosa_chinensis RchiOBHm_Chr4g0443121
rosa_laevigata RLG00000005952
rosa_multiflora Rmu_sc0007968.1_g000013
rosa_roxburghii Rroxscaffold_5G00383740
rosa_rugosa Rorug04G0344600
rosa_samantha Rh4BG410500 Rh4CG426000 Rh4DG405500
rosa_wichuraiana Rw4G034390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 59
AciI CCGC 3 cut(s) 36, 43, 57
AclWI GGATC 3 cut(s) 390, 403, 830
AcoI YGGCCR 2 cut(s) 407, 595
AcsI RAATTY 3 cut(s) 475, 565, 1023
AcuI CTGAAG 2 cut(s) 186, 749
AfaI GTAC 2 cut(s) 252, 846
AfeI AGCGCT 1 cut(s) 948
AfiI CCNNNNNNNGG 5 cut(s) 405, 463, 593, 624, 625
AflII CTTAAG 2 cut(s) 1064, 1117
AflIII ACRYGT 1 cut(s) 726
AgsI TTSAA 7 cut(s) 275, 367, 439, 539, 571, 745, 1193
AjiI CACGTC 1 cut(s) 787
AjnI CCWGG 3 cut(s) 82, 457, 501
AjuI GAANNNNNNNTTGG 2 cut(s) 1185, 1217
AloI GAACNNNNNNTCC 2 cut(s) 125, 157
Alw21I GWGCWC 3 cut(s) 150, 249, 559
Alw26I GTCTC 1 cut(s) 651
Alw44I GTGCAC 1 cut(s) 146
AlwI GGATC 3 cut(s) 390, 403, 830
AlwNI CAGNNNCTG 1 cut(s) 1433
Ama87I CYCGRG 2 cut(s) 242, 648
Aor51HI AGCGCT 1 cut(s) 948
AoxI GGCC 3 cut(s) 93, 407, 595
ApaLI GTGCAC 1 cut(s) 146
ApeKI GCWGC 6 cut(s) 5, 420, 959, 971, 1112, 1223
ApoI RAATTY 3 cut(s) 475, 565, 1023
Asp700I GAANNNNTTC 1 cut(s) 1149
AspLEI GCGC 2 cut(s) 949, 1104
AspS9I GGNCC 2 cut(s) 94, 769
AsuHPI GGTGA 6 cut(s) 25, 517, 575, 695, 978, 1414
AvaI CYCGRG 2 cut(s) 242, 648
AvaII GGWCC 1 cut(s) 769
AxyI CCTNAGG 1 cut(s) 336
BaeGI GKGCMC 1 cut(s) 150
BalI TGGCCA 2 cut(s) 409, 597
BamHI GGATCC 1 cut(s) 395
BanI GGYRCC 1 cut(s) 59
Bbv12I GWGCWC 3 cut(s) 150, 249, 559
BbvI GCAGC 6 cut(s) 17, 432, 946, 958, 1124, 1210
BccI CCATC 8 cut(s) 10, 284, 455, 618, 913, 935, 1012, 1040
BceAI ACGGC 1 cut(s) 140
BciT130I CCWGG 3 cut(s) 84, 459, 503
BclI TGATCA 2 cut(s) 114, 580
BcoDI GTCTC 1 cut(s) 651
BfaI CTAG 2 cut(s) 797, 1412
BfmI CTRYAG 1 cut(s) 603
BfoI RGCGCY 2 cut(s) 950, 1105
BfrI CTTAAG 2 cut(s) 1064, 1117
BglII AGATCT 1 cut(s) 1387
BisI GCNGC 6 cut(s) 6, 421, 960, 972, 1113, 1224
BlsI GCNGC 6 cut(s) 7, 422, 961, 973, 1114, 1225
BmcAI AGTACT 1 cut(s) 846
Bme1390I CCNGG 3 cut(s) 84, 459, 503
Bme18I GGWCC 1 cut(s) 769
BmeT110I CYCGRG 2 cut(s) 242, 648
BmgBI CACGTC 1 cut(s) 787
BmgT120I GGNCC 2 cut(s) 94, 769
BmiI GGNNCC 3 cut(s) 61, 96, 397
BmrFI CCNGG 3 cut(s) 84, 459, 503
BmrI ACTGGG 1 cut(s) 1271
BmsI GCATC 7 cut(s) 506, 598, 620, 699, 783, 946, 1424
BmuI ACTGGG 1 cut(s) 1271
BpmI CTGGAG 1 cut(s) 996
Bpu10I CCTNAGC 1 cut(s) 1075
BpuEI CTTGAG 2 cut(s) 153, 1422
BsaAI YACGTR 1 cut(s) 250
BsaJI CCNNGG 4 cut(s) 83, 457, 619, 1010
BsaXI ACNNNNNCTCC 4 cut(s) 129, 159, 1280, 1310
Bsc4I CCNNNNNNNGG 5 cut(s) 405, 463, 593, 624, 625
Bse1I ACTGG 4 cut(s) 397, 1134, 1266, 1342
Bse21I CCTNAGG 1 cut(s) 336
Bse3DI GCAATG 2 cut(s) 357, 636
BseBI CCWGG 3 cut(s) 84, 459, 503
BseDI CCNNGG 4 cut(s) 83, 457, 619, 1010
BseGI GGATG 4 cut(s) 611, 629, 961, 1297
BseLI CCNNNNNNNGG 5 cut(s) 405, 463, 593, 624, 625
BseMI GCAATG 2 cut(s) 357, 636
BseMII CTCAG 2 cut(s) 327, 1343
BseNI ACTGG 4 cut(s) 397, 1134, 1266, 1342
BseRI GAGGAG 1 cut(s) 1047
BseSI GKGCMC 1 cut(s) 150
BseXI GCAGC 6 cut(s) 17, 432, 946, 958, 1124, 1210
BsgI GTGCAG 1 cut(s) 984
BshFI GGCC 3 cut(s) 95, 409, 597
BshNI GGYRCC 1 cut(s) 59
BsiHKAI GWGCWC 3 cut(s) 150, 249, 559
BsiHKCI CYCGRG 2 cut(s) 242, 648
BslFI GGGAC 4 cut(s) 686, 797, 1278, 1282
BslI CCNNNNNNNGG 5 cut(s) 405, 463, 593, 624, 625
BsmAI GTCTC 1 cut(s) 651
BsmBI CGTCTC 1 cut(s) 651
BsmFI GGGAC 4 cut(s) 686, 797, 1278, 1282
BsmI GAATGC 1 cut(s) 653
BsnI GGCC 3 cut(s) 95, 409, 597
BsoBI CYCGRG 2 cut(s) 242, 648
Bsp1286I GDGCHC 3 cut(s) 150, 249, 559
Bsp143I GATC 6 cut(s) 114, 395, 580, 687, 822, 1387
Bsp19I CCATGG 1 cut(s) 1010
BspACI CCGC 3 cut(s) 36, 43, 57
BspANI GGCC 3 cut(s) 95, 409, 597
BspCNI CTCAG 2 cut(s) 328, 1342
BspLI GGNNCC 3 cut(s) 61, 96, 397
BspPI GGATC 3 cut(s) 390, 403, 830
BspT107I GGYRCC 1 cut(s) 59
BspTI CTTAAG 2 cut(s) 1064, 1117
BsrDI GCAATG 2 cut(s) 357, 636
BsrI ACTGG 4 cut(s) 397, 1134, 1266, 1342
BssECI CCNNGG 4 cut(s) 83, 457, 619, 1010
BssMI GATC 6 cut(s) 114, 395, 580, 687, 822, 1387
BssT1I CCWWGG 2 cut(s) 619, 1010
Bst2UI CCWGG 3 cut(s) 84, 459, 503
Bst4CI ACNGT 2 cut(s) 255, 1150
Bst6I CTCTTC 1 cut(s) 1065
BstAFI CTTAAG 2 cut(s) 1064, 1117
BstBAI YACGTR 1 cut(s) 250
BstC8I GCNNGC 2 cut(s) 325, 1034
BstDEI CTNAG 3 cut(s) 336, 1075, 1329
BstDSI CCRYGG 1 cut(s) 1010
BstF5I GGATG 4 cut(s) 611, 629, 961, 1297
BstH2I RGCGCY 2 cut(s) 950, 1105
BstHHI GCGC 2 cut(s) 949, 1104
BstKTI GATC 6 cut(s) 117, 398, 583, 690, 825, 1390
BstMAI GTCTC 1 cut(s) 651
BstMBI GATC 6 cut(s) 114, 395, 580, 687, 822, 1387
BstMWI GCNNNNNNNGC 3 cut(s) 608, 635, 968
BstNI CCWGG 3 cut(s) 84, 459, 503
BstNSI RCATGY 1 cut(s) 730
BstSCI CCNGG 3 cut(s) 82, 457, 501
BstSFI CTRYAG 1 cut(s) 603
BstSLI GKGCMC 1 cut(s) 150
BstV1I GCAGC 6 cut(s) 17, 432, 946, 958, 1124, 1210
BstX2I RGATCY 2 cut(s) 395, 1387
BstXI CCANNNNNNTGG 3 cut(s) 1011, 1141, 1285
BstYI RGATCY 2 cut(s) 395, 1387
Bsu36I CCTNAGG 1 cut(s) 336
BsuRI GGCC 3 cut(s) 95, 409, 597
BtgI CCRYGG 1 cut(s) 1010
BtrI CACGTC 1 cut(s) 787
BtsCI GGATG 4 cut(s) 611, 629, 961, 1297
BtsI GCAGTG 1 cut(s) 1431
BtsIMutI CAGTG 3 cut(s) 1141, 1259, 1431
Cac8I GCNNGC 2 cut(s) 325, 1034
CaiI CAGNNNCTG 1 cut(s) 1433
CfoI GCGC 2 cut(s) 949, 1104
Cfr13I GGNCC 2 cut(s) 94, 769
CsiI ACCWGGT 1 cut(s) 501
Csp6I GTAC 2 cut(s) 251, 845
CviAII CATG 4 cut(s) 727, 1011, 1141, 1285
CviQI GTAC 2 cut(s) 251, 845
DdeI CTNAG 3 cut(s) 336, 1075, 1329
DpnI GATC 6 cut(s) 116, 397, 582, 689, 824, 1389
DpnII GATC 6 cut(s) 114, 395, 580, 687, 822, 1387
DraI TTTAAA 1 cut(s) 864
EaeI YGGCCR 2 cut(s) 407, 595
Eam1104I CTCTTC 1 cut(s) 1065
EarI CTCTTC 1 cut(s) 1065
EciI GGCGGA 1 cut(s) 32
Eco130I CCWWGG 2 cut(s) 619, 1010
Eco47I GGWCC 1 cut(s) 769
Eco47III AGCGCT 1 cut(s) 948
Eco57I CTGAAG 2 cut(s) 186, 749
Eco81I CCTNAGG 1 cut(s) 336
Eco88I CYCGRG 2 cut(s) 242, 648
EcoRII CCWGG 3 cut(s) 82, 457, 501
EcoT14I CCWWGG 2 cut(s) 619, 1010
EcoT22I ATGCAT 1 cut(s) 613
ErhI CCWWGG 2 cut(s) 619, 1010
Esp3I CGTCTC 1 cut(s) 651
FaeI CATG 4 cut(s) 730, 1014, 1144, 1288
FalI AAGNNNNNCTT 4 cut(s) 1044, 1076, 1058, 1090
FaqI GGGAC 4 cut(s) 686, 797, 1278, 1282
FatI CATG 4 cut(s) 726, 1010, 1140, 1284
FbaI TGATCA 2 cut(s) 114, 580
Fnu4HI GCNGC 6 cut(s) 6, 421, 960, 972, 1113, 1224
FokI GGATG 4 cut(s) 598, 636, 968, 1304
Fsp4HI GCNGC 6 cut(s) 6, 421, 960, 972, 1113, 1224
FspBI CTAG 2 cut(s) 797, 1412
GlaI GCGC 2 cut(s) 948, 1103
GluI GCNGC 6 cut(s) 6, 421, 960, 972, 1113, 1224
GsuI CTGGAG 1 cut(s) 996
HaeII RGCGCY 2 cut(s) 950, 1105
HaeIII GGCC 3 cut(s) 95, 409, 597
HhaI GCGC 2 cut(s) 949, 1104
Hin1II CATG 4 cut(s) 730, 1014, 1144, 1288
Hin6I GCGC 2 cut(s) 947, 1102
HinP1I GCGC 2 cut(s) 947, 1102
HindIII AAGCTT 3 cut(s) 368, 674, 1157
HinfI GANTC 4 cut(s) 275, 302, 1295, 1322
HphI GGTGA 6 cut(s) 25, 517, 575, 695, 978, 1414
Hpy166II GTNNAC 2 cut(s) 148, 508
Hpy188I TCNGA 8 cut(s) 205, 226, 280, 1087, 1155, 1321, 1349, 1392
Hpy8I GTNNAC 2 cut(s) 148, 508
HpyAV CCTTC 3 cut(s) 49, 128, 409
HpyCH4III ACNGT 2 cut(s) 255, 1150
HpyCH4IV ACGT 3 cut(s) 249, 330, 786
HpyF10VI GCNNNNNNNGC 3 cut(s) 608, 635, 968
HpyF3I CTNAG 3 cut(s) 336, 1075, 1329
HpySE526I ACGT 3 cut(s) 249, 330, 786
Hsp92II CATG 4 cut(s) 730, 1014, 1144, 1288
HspAI GCGC 2 cut(s) 947, 1102
Ksp22I TGATCA 2 cut(s) 114, 580
Kzo9I GATC 6 cut(s) 114, 395, 580, 687, 822, 1387
LmnI GCTCC 4 cut(s) 493, 944, 1060, 1201
Lsp1109I GCAGC 6 cut(s) 17, 432, 946, 958, 1124, 1210
LweI GCATC 7 cut(s) 506, 598, 620, 699, 783, 946, 1424
MabI ACCWGGT 1 cut(s) 501
MaeI CTAG 2 cut(s) 797, 1412
MaeII ACGT 3 cut(s) 249, 330, 786
MaeIII GTNAC 2 cut(s) 787, 1136
MalI GATC 6 cut(s) 116, 397, 582, 689, 824, 1389
MboI GATC 6 cut(s) 114, 395, 580, 687, 822, 1387
MboII GAAGA 7 cut(s) 172, 230, 442, 445, 518, 1052, 1369
MflI RGATCY 2 cut(s) 395, 1387
MhlI GDGCHC 3 cut(s) 150, 249, 559
MlsI TGGCCA 2 cut(s) 409, 597
MluCI AATT 8 cut(s) 231, 316, 356, 475, 565, 1023, 1350, 1406
MluNI TGGCCA 2 cut(s) 409, 597
MlyI GAGTC 2 cut(s) 296, 1304
Mox20I TGGCCA 2 cut(s) 409, 597
Mph1103I ATGCAT 1 cut(s) 613
MroXI GAANNNNTTC 1 cut(s) 1149
MscI TGGCCA 2 cut(s) 409, 597
MseI TTAA 5 cut(s) 849, 863, 1065, 1118, 1176
MslI CAYNNNNRTG 2 cut(s) 725, 1009
Msp20I TGGCCA 2 cut(s) 409, 597
MspCI CTTAAG 2 cut(s) 1064, 1117
MspR9I CCNGG 3 cut(s) 84, 459, 503
Mva1269I GAATGC 1 cut(s) 653
MvaI CCWGG 3 cut(s) 84, 459, 503
MwoI GCNNNNNNNGC 3 cut(s) 608, 635, 968
NcoI CCATGG 1 cut(s) 1010
NdeII GATC 6 cut(s) 114, 395, 580, 687, 822, 1387
NlaIII CATG 4 cut(s) 730, 1014, 1144, 1288
NlaIV GGNNCC 3 cut(s) 61, 96, 397
NmuCI GTSAC 2 cut(s) 787, 1136
NsiI ATGCAT 1 cut(s) 613
NspI RCATGY 1 cut(s) 730
PciI ACATGT 1 cut(s) 726
PcsI WCGNNNNNNNCGW 1 cut(s) 655
PctI GAATGC 1 cut(s) 653
PdmI GAANNNNTTC 1 cut(s) 1149
PfeI GAWTC 2 cut(s) 275, 1322
PkrI GCNGC 6 cut(s) 7, 422, 961, 973, 1114, 1225
PleI GAGTC 2 cut(s) 296, 1303
PpsI GAGTC 2 cut(s) 296, 1303
Ppu21I YACGTR 1 cut(s) 250
PscI ACATGT 1 cut(s) 726
Psp6I CCWGG 3 cut(s) 82, 457, 501
PspGI CCWGG 3 cut(s) 82, 457, 501
PspN4I GGNNCC 3 cut(s) 61, 96, 397
PspPI GGNCC 2 cut(s) 94, 769
PstNI CAGNNNCTG 1 cut(s) 1433
PsuI RGATCY 2 cut(s) 395, 1387
RsaI GTAC 2 cut(s) 252, 846
RsaNI GTAC 2 cut(s) 251, 845
RseI CAYNNNNRTG 2 cut(s) 725, 1009
SaqAI TTAA 5 cut(s) 849, 863, 1065, 1118, 1176
SatI GCNGC 6 cut(s) 6, 421, 960, 972, 1113, 1224
Sau3AI GATC 6 cut(s) 114, 395, 580, 687, 822, 1387
Sau96I GGNCC 2 cut(s) 94, 769
ScaI AGTACT 1 cut(s) 846
SchI GAGTC 2 cut(s) 296, 1304
ScrFI CCNGG 3 cut(s) 84, 459, 503
SduI GDGCHC 3 cut(s) 150, 249, 559
SexAI ACCWGGT 1 cut(s) 501
SfaNI GCATC 7 cut(s) 506, 598, 620, 699, 783, 946, 1424
SfcI CTRYAG 1 cut(s) 603
SinI GGWCC 1 cut(s) 769
SmiMI CAYNNNNRTG 2 cut(s) 725, 1009
SmlI CTYRAG 4 cut(s) 168, 1064, 1117, 1437
SmoI CTYRAG 4 cut(s) 168, 1064, 1117, 1437
Sse9I AATT 8 cut(s) 231, 316, 356, 475, 565, 1023, 1350, 1406
SsiI CCGC 3 cut(s) 36, 43, 57
SspMI CTAG 2 cut(s) 797, 1412
StyD4I CCNGG 3 cut(s) 82, 457, 501
StyI CCWWGG 2 cut(s) 619, 1010
TaaI ACNGT 2 cut(s) 255, 1150
TaiI ACGT 3 cut(s) 252, 333, 789
TaqI TCGA 1 cut(s) 723
TasI AATT 8 cut(s) 231, 316, 356, 475, 565, 1023, 1350, 1406
TatI WGTACW 1 cut(s) 844
TfiI GAWTC 2 cut(s) 275, 1322
Tru1I TTAA 5 cut(s) 849, 863, 1065, 1118, 1176
Tru9I TTAA 5 cut(s) 849, 863, 1065, 1118, 1176
TscAI CASTG 3 cut(s) 1141, 1266, 1438
TseFI GTSAC 2 cut(s) 787, 1136
TseI GCWGC 6 cut(s) 5, 420, 959, 971, 1112, 1223
Tsp45I GTSAC 2 cut(s) 787, 1136
TspDTI ATGAA 1 cut(s) 368
TspGWI ACGGA 1 cut(s) 647
TspRI CASTG 3 cut(s) 1141, 1266, 1438
Vha464I CTTAAG 2 cut(s) 1064, 1117
VneI GTGCAC 1 cut(s) 146
VpaK11BI GGWCC 1 cut(s) 769
XapI RAATTY 3 cut(s) 475, 565, 1023
XceI RCATGY 1 cut(s) 730
XcmI CCANNNNNNNNNTGG 1 cut(s) 19
XmnI GAANNNNTTC 1 cut(s) 1149
XspI CTAG 2 cut(s) 797, 1412
ZrmI AGTACT 1 cut(s) 846
Zsp2I ATGCAT 1 cut(s) 613
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.