Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0007754

Physical Location & Seq

Genomic Coordinates Reverse (-)

51655009 .. 51660206

Gene Structure 5198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0344600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGACGGAGACTGTGAGGCTGCGCGTGGAATTCAAGGACCGGCACATTCTGAGCAAGTCACAGAGGACCGACGGACTCCGGCGGAGCTGGATTCTCCTGAAACCTCAACACCGCACCATCTCCGACCTCGCCGCCTATCTCCTCCACGTCTTCGACCTCCACGATTCTTGCCCCGATGGCCTCCTCATCTCCATGGATGAGTTTGTGTTGCCGCCGTTTGAGTCCACCTGCATTTTCAAGGATAGAGATATTGTCAGTGTGAAAAGGAAAGGTGTGTCTGAAATTGACATGATTGAGGATGGAAGAAACTGTATTGAGGTTGAAGAAATCGTGGAGAGGCAACTTGCGGATGGAGGTATGAAGCTTCTGGCTAATGAGGAGTTCGAGAAGGAGAAGGGAGGGTATGAAAGTGAGCTAGAAGAGGATGAACCTGACCAGTTGGAAGATATATTGCCAGTTAAAAATGCGCTGGACAACGATACAAGCACACTTTCCAAGAAAAGGAAGCGATCAAATAAACCTGAGAGCTCCAAGAAGAAGAGAAGTAAATCTGCTACTACTGGAGGATGTTCAGTTGTCCCAGAAGATGTTCAAGGTGATGTCCAAGAGGACAAGAACAGAAGCTCTCATAAGCGTCGTGTCAGAAAGAGTCTTTCCAAGAAGGAAAAGTCAACTACTGGAGAGGGTGAGCTGGATGATTCAACCACCTCTGAAACTGATAAAAGGACCAACAACATAAGTCATTCTACACCCAGTGCAAACAGGCACAGTCAGCTTCAAGAGAATGACATAAACGGTGTTGTTTCATCTGACAAGCCTGATGAAAGTAAAAAGTTGCCTAGTAGAAGTGCTCGACGTAAAAAGGCCAAAAGAATATGGAAGAGGGAAAACATGAGAGCTCAGAAGGAAGAGTTACATCAGACACAGGTAGGCAAACCGGTTAATCAGCAATCATCTGACAAAGATAATCAGAAATCATCAAACAAAGCTGATCAACAATCATCTGACAAAGCTAATCAGCAATTATCTGACAAAGATAATCAGAAAAGCTCTGAAGAAGATGAACCAAATACAGATAATGATGAAGAAGACAACGTTGTTCCTGTCGTAACTAGGCCAGGACACATTCGCTTTGCACCCCTCGGTAAAGTGGAAGCAGATCAGAGTTTCCAGCAGAATGAAATTCCAGTGAAAACTTTTCAGTGGAATGGAATAACCAGCAAGAAGAAGGGTCAAAAATGGGGTATGGAGAAAACATCATATTCAATTAAGAGCAACTATGAAGATCTGTACCAAGAGTCATCTGAAATGCCTGGTATTGAAGAAGAGATTCCTGAAAATGATTCCATAGACTTTAATAAGCTTGAGCTCTCTACCAGTGTACCGAAGGAAGGTGATCTAATTGCATATCGGTTGATTGAATTATCATCATGCTGGACCCCTGAAGTTTCTTCCTATCGAGTTGGAAAAGTGTCACAGTACAACCCTCAATCAAATAAGATTGTGCTAGTACAGGTTCCAGAATATCCCATTGTTTTTGAGGAGACAGATGAGGCATCTGCAGAATATCCCATTGTTTTTGAGGAGACAGATGAGGCATCTGAGGTACAACCAGATACATCCCTTTATGGGGAAGATGGTTCTTTAGAGATAGATTATTCTTCTCTTATCGATGTCCGCATTGTCAAGTATGGGAACCTGAACACAGCCAAAGCAGTCACTGGAGATCAAAATGATGTATCCAGTTTTAGGCTCAAGAATGGCATGGAAACTAGGGCTCTATCAGGTTTCAGGCTCAAGAATGACAAAGAAACTCAGGCTGCTGCATCAGGTTTCAGGCTTAAGAATGACAAGGGAACTCGTGCTGGTGCACAAGAAAATGGAAAAGCAGGTGCATGGGATGAAATCAGCCAGGCATTGAATGCGAAGAAAGCGGAGCTTTCTCAGGAAGATGGCTGGGGGAAAAATGATGGTTCAGGAAGGAGCTCGTGGACATCTAGGCCCTGGAGGGGTAGCGCATTGGGTCCAACAATGGCTCTTTTAAGAGCGCAAAGTGAGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003713 GO:0003824 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010452 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018023 GO:0018024 GO:0018026 GO:0018027 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032259 GO:0034968 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0045893 GO:0045935 GO:0046975 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:0140110 GO:1901564 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rubis-subs-bind SET

Protein Analysis

687

Amino Acids

77.24

Weight (kDa)

5.26

Isoelectric Point (pI)

52.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Coilin_N	PF15862	5 - 182	2.8e-10	Coilin N-terminus
Tudor_Coilin	PF23086	449 - 564	3.1e-43	Coilin, C-terminal Tudor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24600 AT1G67920
fragaria_vesca	FvH4_4g33670 FvH4_5g17640
malus_domestica	MD16G1019400.v1.1
prunus_persica	Prupe.1G332700_v2.0.a1 Prupe.5G236200_v2.0.a1
pyrus_communis	pycom06g20600 pycom16g01740
rosa_chinensis	RchiOBHm_Chr4g0443131 RchiOBHm_Chr7g0178031
rosa_laevigata	RLG00000005480
rosa_multiflora	Rmu_sc0007968.1_g000012
rosa_roxburghii	Rroxscaffold_3G00275270 Rroxscaffold_5G00383750
rosa_rugosa	Rorug04G0344600 Rorug06G0412400
rosa_samantha	Rh4DG405600 Rh7AG012000 Rh7BG011400 Rh7CG012000 Rh7DG012100
rosa_wichuraiana	Rw4G034400 Rw7G000950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	236, 1880
Acc36I	ACCTGC	2 cut(s)	236, 1880
AccII	CGCG	1 cut(s)	24
AciI	CCGC	7 cut(s)	82, 112, 132, 212, 347, 1678, 1934
AclI	AACGTT	1 cut(s)	1095
AcsI	RAATTY	2 cut(s)	29, 1182
AcuI	CTGAAG	2 cut(s)	1074, 1464
AdeI	CACNNNGTG	1 cut(s)	755
AfaI	GTAC	5 cut(s)	1292, 1383, 1481, 1512, 1608
AfiI	CCNNNNNNNGG	6 cut(s)	501, 1391, 1629, 1630, 1749, 2009
AflII	CTTAAG	1 cut(s)	1841
AgeI	ACCGGT	1 cut(s)	937
AjiI	CACGTC	1 cut(s)	148
AjnI	CCWGG	4 cut(s)	1117, 1312, 1911, 2003
Alw21I	GWGCWC	6 cut(s)	530, 853, 901, 1371, 1873, 1988
Alw26I	GTCTC	3 cut(s)	2, 1538, 1580
Alw44I	GTGCAC	1 cut(s)	1869
AlwNI	CAGNNNCTG	1 cut(s)	1721
AoxI	GGCC	4 cut(s)	178, 864, 1115, 2000
ApaLI	GTGCAC	1 cut(s)	1869
ApeKI	GCWGC	3 cut(s)	19, 1820, 1823
ApoI	RAATTY	2 cut(s)	29, 1182
AsiGI	ACCGGT	1 cut(s)	937
Asp700I	GAANNNNTTC	2 cut(s)	588, 1329
AspLEI	GCGC	4 cut(s)	24, 469, 2018, 2050
AspS9I	GGNCC	6 cut(s)	37, 66, 726, 1437, 2001, 2024
AsuHPI	GGTGA	3 cut(s)	608, 698, 1406
AvaII	GGWCC	5 cut(s)	37, 66, 726, 1437, 2024
BaeGI	GKGCMC	1 cut(s)	1873
BaeI	ACNNNNGTAYC	2 cut(s)	1365, 1398
BanII	GRGCYC	5 cut(s)	530, 901, 1371, 1780, 1988
BauI	CACGAG	2 cut(s)	1860, 1987
BbsI	GAAGAC	2 cut(s)	142, 1095
Bbv12I	GWGCWC	6 cut(s)	530, 853, 901, 1371, 1873, 1988
BbvI	GCAGC	3 cut(s)	6, 1807, 1810
BccI	CCATC	7 cut(s)	125, 170, 293, 344, 1631, 1946, 1964
BceAI	ACGGC	1 cut(s)	199
BciT130I	CCWGG	4 cut(s)	1119, 1314, 1913, 2005
BciVI	GTATCC	1 cut(s)	1750
BclI	TGATCA	1 cut(s)	991
BcoDI	GTCTC	3 cut(s)	2, 1538, 1580
BfaI	CTAG	6 cut(s)	416, 840, 1113, 1508, 1773, 1998
BfmI	CTRYAG	1 cut(s)	1560
BfrI	CTTAAG	1 cut(s)	1841
BfuAI	ACCTGC	2 cut(s)	236, 1880
BfuI	GTATCC	1 cut(s)	1750
BglI	GCCNNNNNGGC	1 cut(s)	177
BglII	AGATCT	1 cut(s)	1285
BisI	GCNGC	5 cut(s)	20, 132, 212, 1821, 1824
BlsI	GCNGC	5 cut(s)	21, 133, 213, 1822, 1825
Bme1390I	CCNGG	4 cut(s)	1119, 1314, 1913, 2005
Bme18I	GGWCC	5 cut(s)	37, 66, 726, 1437, 2024
BmgBI	CACGTC	1 cut(s)	148
BmgT120I	GGNCC	6 cut(s)	37, 66, 726, 1437, 2001, 2024
BmiI	GGNNCC	4 cut(s)	1439, 1518, 1697, 2025
BmrFI	CCNGG	4 cut(s)	1119, 1314, 1913, 2005
BmrI	ACTGGG	1 cut(s)	747
BmsI	GCATC	3 cut(s)	1565, 1607, 1835
BmuI	ACTGGG	1 cut(s)	747
BpiI	GAAGAC	2 cut(s)	142, 1095
BpmI	CTGGAG	4 cut(s)	582, 699, 1743, 2026
BpuEI	CTTGAG	3 cut(s)	1385, 1739, 1781
Bsa29I	ATCGAT	1 cut(s)	1671
BsaJI	CCNNGG	3 cut(s)	192, 1141, 2003
BsaWI	WCCGGW	1 cut(s)	937
Bsc4I	CCNNNNNNNGG	6 cut(s)	501, 1391, 1629, 1630, 1749, 2009
Bse118I	RCCGGY	2 cut(s)	39, 937
Bse1I	ACTGG	9 cut(s)	436, 455, 565, 682, 753, 1187, 1377, 1726, 1743
BseBI	CCWGG	4 cut(s)	1119, 1314, 1913, 2005
BseCI	ATCGAT	1 cut(s)	1671
BseDI	CCNNGG	3 cut(s)	192, 1141, 2003
BseGI	GGATG	8 cut(s)	202, 304, 355, 430, 572, 700, 1619, 1906
BseLI	CCNNNNNNNGG	6 cut(s)	501, 1391, 1629, 1630, 1749, 2009
BseMII	CTCAG	6 cut(s)	41, 513, 914, 1593, 1829, 1958
BseNI	ACTGG	9 cut(s)	436, 455, 565, 682, 753, 1187, 1377, 1726, 1743
BseRI	GAGGAG	5 cut(s)	131, 173, 392, 1556, 1598
BseSI	GKGCMC	1 cut(s)	1873
BseXI	GCAGC	3 cut(s)	6, 1807, 1810
BseYI	CCCAGC	1 cut(s)	1956
Bsh1236I	CGCG	1 cut(s)	24
BshFI	GGCC	4 cut(s)	180, 866, 1117, 2002
BshTI	ACCGGT	1 cut(s)	937
BshVI	ATCGAT	1 cut(s)	1671
BsiHKAI	GWGCWC	6 cut(s)	530, 853, 901, 1371, 1873, 1988
BsiSI	CCGG	3 cut(s)	40, 79, 938
BslFI	GGGAC	1 cut(s)	563
BslI	CCNNNNNNNGG	6 cut(s)	501, 1391, 1629, 1630, 1749, 2009
BsmAI	GTCTC	3 cut(s)	2, 1538, 1580
BsmFI	GGGAC	1 cut(s)	563
BsmI	GAATGC	1 cut(s)	1927
BsnI	GGCC	4 cut(s)	180, 866, 1117, 2002
Bsp1286I	GDGCHC	7 cut(s)	530, 853, 901, 1371, 1780, 1873, 1988
Bsp143I	GATC	6 cut(s)	509, 991, 1159, 1285, 1396, 1726
Bsp19I	CCATGG	1 cut(s)	192
BspACI	CCGC	7 cut(s)	82, 112, 132, 212, 347, 1678, 1934
BspANI	GGCC	4 cut(s)	180, 866, 1117, 2002
BspCNI	CTCAG	6 cut(s)	42, 514, 913, 1594, 1828, 1957
BspDI	ATCGAT	1 cut(s)	1671
BspFNI	CGCG	1 cut(s)	24
BspLI	GGNNCC	4 cut(s)	1439, 1518, 1697, 2025
BspMAI	CTGCAG	1 cut(s)	1564
BspMI	ACCTGC	2 cut(s)	236, 1880
BspTI	CTTAAG	1 cut(s)	1841
BsrFI	RCCGGY	2 cut(s)	39, 937
BsrI	ACTGG	9 cut(s)	436, 455, 565, 682, 753, 1187, 1377, 1726, 1743
BssAI	RCCGGY	2 cut(s)	39, 937
BssECI	CCNNGG	3 cut(s)	192, 1141, 2003
BssMI	GATC	6 cut(s)	509, 991, 1159, 1285, 1396, 1726
BssSI	CACGAG	2 cut(s)	1860, 1987
BssT1I	CCWWGG	1 cut(s)	192
Bst2BI	CACGAG	2 cut(s)	1860, 1987
Bst2UI	CCWGG	4 cut(s)	1119, 1314, 1913, 2005
Bst4CI	ACNGT	5 cut(s)	13, 311, 770, 797, 1479
Bst6I	CTCTTC	5 cut(s)	414, 533, 875, 903, 1320
BstAFI	CTTAAG	1 cut(s)	1841
BstAPI	GCANNNNNTGC	1 cut(s)	1922
BstDEI	CTNAG	6 cut(s)	50, 522, 900, 1602, 1815, 1944
BstDSI	CCRYGG	1 cut(s)	192
BstF5I	GGATG	8 cut(s)	202, 304, 355, 430, 572, 700, 1619, 1906
BstFNI	CGCG	1 cut(s)	24
BstHHI	GCGC	4 cut(s)	24, 469, 2018, 2050
BstKTI	GATC	6 cut(s)	512, 994, 1162, 1288, 1399, 1729
BstMAI	GTCTC	3 cut(s)	2, 1538, 1580
BstMBI	GATC	6 cut(s)	509, 991, 1159, 1285, 1396, 1726
BstMWI	GCNNNNNNNGC	5 cut(s)	177, 772, 1922, 1931, 2056
BstNI	CCWGG	4 cut(s)	1119, 1314, 1913, 2005
BstSCI	CCNGG	4 cut(s)	1117, 1312, 1911, 2003
BstSFI	CTRYAG	1 cut(s)	1560
BstSLI	GKGCMC	1 cut(s)	1873
BstUI	CGCG	1 cut(s)	24
BstV1I	GCAGC	3 cut(s)	6, 1807, 1810
BstV2I	GAAGAC	2 cut(s)	142, 1095
BstX2I	RGATCY	1 cut(s)	1285
BstYI	RGATCY	1 cut(s)	1285
Bsu15I	ATCGAT	1 cut(s)	1671
BsuI	GTATCC	1 cut(s)	1750
BsuRI	GGCC	4 cut(s)	180, 866, 1117, 2002
BsuTUI	ATCGAT	1 cut(s)	1671
BtgI	CCRYGG	1 cut(s)	192
BtrI	CACGTC	1 cut(s)	148
BtsCI	GGATG	8 cut(s)	202, 304, 355, 430, 572, 700, 1619, 1906
BtsIMutI	CAGTG	6 cut(s)	262, 760, 1194, 1208, 1384, 1719
BveI	ACCTGC	2 cut(s)	236, 1880
CaiI	CAGNNNCTG	1 cut(s)	1721
CfoI	GCGC	4 cut(s)	24, 469, 2018, 2050
Cfr10I	RCCGGY	2 cut(s)	39, 937
Cfr13I	GGNCC	6 cut(s)	37, 66, 726, 1437, 2001, 2024
ClaI	ATCGAT	1 cut(s)	1671
CseI	GACGC	1 cut(s)	623
Csp6I	GTAC	5 cut(s)	1291, 1382, 1480, 1511, 1607
CspAI	ACCGGT	1 cut(s)	937
CspCI	CAANNNNNGTGG	2 cut(s)	149, 184
CviAII	CATG	6 cut(s)	193, 289, 892, 1431, 1765, 1896
CviQI	GTAC	5 cut(s)	1291, 1382, 1480, 1511, 1607
DdeI	CTNAG	6 cut(s)	50, 522, 900, 1602, 1815, 1944
DpnI	GATC	6 cut(s)	511, 993, 1161, 1287, 1398, 1728
DpnII	GATC	6 cut(s)	509, 991, 1159, 1285, 1396, 1726
DraIII	CACNNNGTG	1 cut(s)	755
Eam1104I	CTCTTC	5 cut(s)	414, 533, 875, 903, 1320
EarI	CTCTTC	5 cut(s)	414, 533, 875, 903, 1320
EciI	GGCGGA	1 cut(s)	97
Ecl136II	GAGCTC	4 cut(s)	528, 899, 1369, 1986
Eco130I	CCWWGG	1 cut(s)	192
Eco24I	GRGCYC	5 cut(s)	530, 901, 1371, 1780, 1988
Eco47I	GGWCC	5 cut(s)	37, 66, 726, 1437, 2024
Eco53kI	GAGCTC	4 cut(s)	528, 899, 1369, 1986
Eco57I	CTGAAG	2 cut(s)	1074, 1464
EcoICRI	GAGCTC	4 cut(s)	528, 899, 1369, 1986
EcoO109I	RGGNCCY	1 cut(s)	2001
EcoRI	GAATTC	1 cut(s)	29
EcoRII	CCWGG	4 cut(s)	1117, 1312, 1911, 2003
EcoT14I	CCWWGG	1 cut(s)	192
EcoT38I	GRGCYC	5 cut(s)	530, 901, 1371, 1780, 1988
ErhI	CCWWGG	1 cut(s)	192
FaeI	CATG	6 cut(s)	196, 292, 895, 1434, 1768, 1899
FalI	AAGNNNNNCTT	2 cut(s)	1923, 1955
FaqI	GGGAC	1 cut(s)	563
FatI	CATG	6 cut(s)	192, 288, 891, 1430, 1764, 1895
FbaI	TGATCA	1 cut(s)	991
Fnu4HI	GCNGC	5 cut(s)	20, 132, 212, 1821, 1824
FokI	GGATG	8 cut(s)	209, 311, 362, 437, 579, 707, 1606, 1913
FriOI	GRGCYC	5 cut(s)	530, 901, 1371, 1780, 1988
Fsp4HI	GCNGC	5 cut(s)	20, 132, 212, 1821, 1824
FspBI	CTAG	6 cut(s)	416, 840, 1113, 1508, 1773, 1998
GlaI	GCGC	4 cut(s)	23, 468, 2017, 2049
GluI	GCNGC	5 cut(s)	20, 132, 212, 1821, 1824
GsaI	CCCAGC	1 cut(s)	1960
GsuI	CTGGAG	4 cut(s)	582, 699, 1743, 2026
HaeIII	GGCC	4 cut(s)	180, 866, 1117, 2002
HapII	CCGG	3 cut(s)	40, 79, 938
HgaI	GACGC	1 cut(s)	623
HhaI	GCGC	4 cut(s)	24, 469, 2018, 2050
Hin1II	CATG	6 cut(s)	196, 292, 895, 1434, 1768, 1899
Hin6I	GCGC	4 cut(s)	22, 467, 2016, 2048
HinP1I	GCGC	4 cut(s)	22, 467, 2016, 2048
HincII	GTYRAC	1 cut(s)	672
HindII	GTYRAC	1 cut(s)	672
HindIII	AAGCTT	2 cut(s)	362, 1361
HinfI	GANTC	9 cut(s)	75, 91, 164, 221, 649, 698, 1298, 1330, 1343
HpaII	CCGG	3 cut(s)	40, 79, 938
HphI	GGTGA	3 cut(s)	608, 698, 1406
Hpy166II	GTNNAC	5 cut(s)	225, 672, 1382, 1871, 1992
Hpy188III	TCNNGA	9 cut(s)	97, 385, 779, 1334, 1520, 1756, 1798, 1946, 1977
Hpy8I	GTNNAC	5 cut(s)	225, 672, 1382, 1871, 1992
Hpy99I	CGWCG	3 cut(s)	74, 639, 858
HpyAV	CCTTC	8 cut(s)	382, 388, 655, 898, 1222, 1381, 1385, 1974
HpyCH4III	ACNGT	5 cut(s)	13, 311, 770, 797, 1479
HpyCH4IV	ACGT	3 cut(s)	147, 856, 1095
HpyCH4V	TGCA	8 cut(s)	231, 758, 1136, 1406, 1562, 1826, 1871, 1895
HpyF10VI	GCNNNNNNNGC	5 cut(s)	177, 772, 1922, 1931, 2056
HpyF3I	CTNAG	6 cut(s)	50, 522, 900, 1602, 1815, 1944
HpySE526I	ACGT	3 cut(s)	147, 856, 1095
Hsp92II	CATG	6 cut(s)	196, 292, 895, 1434, 1768, 1899
HspAI	GCGC	4 cut(s)	22, 467, 2016, 2048
Ksp22I	TGATCA	1 cut(s)	991
Kzo9I	GATC	6 cut(s)	509, 991, 1159, 1285, 1396, 1726
LmnI	GCTCC	4 cut(s)	84, 533, 1936, 1983
Lsp1109I	GCAGC	3 cut(s)	6, 1807, 1810
LweI	GCATC	3 cut(s)	1565, 1607, 1835
MaeI	CTAG	6 cut(s)	416, 840, 1113, 1508, 1773, 1998
MaeII	ACGT	3 cut(s)	147, 856, 1095
MaeIII	GTNAC	5 cut(s)	57, 912, 1108, 1473, 1717
MalI	GATC	6 cut(s)	511, 993, 1161, 1287, 1398, 1728
MboI	GATC	6 cut(s)	509, 991, 1159, 1285, 1396, 1726
MflI	RGATCY	1 cut(s)	1285
MhlI	GDGCHC	7 cut(s)	530, 853, 901, 1371, 1780, 1873, 1988
MluCI	AATT	7 cut(s)	29, 282, 1022, 1182, 1266, 1401, 1421
MlyI	GAGTC	4 cut(s)	69, 230, 658, 1307
MmeI	TCCRAC	4 cut(s)	147, 420, 1444, 2051
MroXI	GAANNNNTTC	2 cut(s)	588, 1329
MseI	TTAA	6 cut(s)	459, 942, 1269, 1356, 1842, 2042
MslI	CAYNNNNRTG	1 cut(s)	191
MspCI	CTTAAG	1 cut(s)	1841
MspI	CCGG	3 cut(s)	40, 79, 938
MspR9I	CCNGG	4 cut(s)	1119, 1314, 1913, 2005
Mva1269I	GAATGC	1 cut(s)	1927
MvaI	CCWGG	4 cut(s)	1119, 1314, 1913, 2005
MvnI	CGCG	1 cut(s)	24
MwoI	GCNNNNNNNGC	5 cut(s)	177, 772, 1922, 1931, 2056
NcoI	CCATGG	1 cut(s)	192
NdeII	GATC	6 cut(s)	509, 991, 1159, 1285, 1396, 1726
NlaIII	CATG	6 cut(s)	196, 292, 895, 1434, 1768, 1899
NlaIV	GGNNCC	4 cut(s)	1439, 1518, 1697, 2025
NmuCI	GTSAC	3 cut(s)	57, 1473, 1717
PaqCI	CACCTGC	2 cut(s)	236, 1880
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PctI	GAATGC	1 cut(s)	1927
PdmI	GAANNNNTTC	2 cut(s)	588, 1329
PfeI	GAWTC	5 cut(s)	91, 164, 698, 1330, 1343
PinAI	ACCGGT	1 cut(s)	937
PkrI	GCNGC	5 cut(s)	21, 133, 213, 1822, 1825
PleI	GAGTC	4 cut(s)	69, 229, 657, 1306
PpsI	GAGTC	4 cut(s)	69, 229, 657, 1306
Psp124BI	GAGCTC	4 cut(s)	530, 901, 1371, 1988
Psp1406I	AACGTT	1 cut(s)	1095
Psp6I	CCWGG	4 cut(s)	1117, 1312, 1911, 2003
PspFI	CCCAGC	1 cut(s)	1956
PspGI	CCWGG	4 cut(s)	1117, 1312, 1911, 2003
PspN4I	GGNNCC	4 cut(s)	1439, 1518, 1697, 2025
PspPI	GGNCC	6 cut(s)	37, 66, 726, 1437, 2001, 2024
PstI	CTGCAG	1 cut(s)	1564
PstNI	CAGNNNCTG	1 cut(s)	1721
PsuI	RGATCY	1 cut(s)	1285
RsaI	GTAC	5 cut(s)	1292, 1383, 1481, 1512, 1608
RsaNI	GTAC	5 cut(s)	1291, 1382, 1480, 1511, 1607
RseI	CAYNNNNRTG	1 cut(s)	191
SacI	GAGCTC	4 cut(s)	530, 901, 1371, 1988
SaqAI	TTAA	6 cut(s)	459, 942, 1269, 1356, 1842, 2042
SatI	GCNGC	5 cut(s)	20, 132, 212, 1821, 1824
Sau3AI	GATC	6 cut(s)	509, 991, 1159, 1285, 1396, 1726
Sau96I	GGNCC	6 cut(s)	37, 66, 726, 1437, 2001, 2024
SchI	GAGTC	4 cut(s)	69, 230, 658, 1307
ScrFI	CCNGG	4 cut(s)	1119, 1314, 1913, 2005
SduI	GDGCHC	7 cut(s)	530, 853, 901, 1371, 1780, 1873, 1988
SfaNI	GCATC	3 cut(s)	1565, 1607, 1835
SfcI	CTRYAG	1 cut(s)	1560
SinI	GGWCC	5 cut(s)	37, 66, 726, 1437, 2024
SmiMI	CAYNNNNRTG	1 cut(s)	191
SmlI	CTYRAG	4 cut(s)	1364, 1754, 1796, 1841
SmoI	CTYRAG	4 cut(s)	1364, 1754, 1796, 1841
Sse9I	AATT	7 cut(s)	29, 282, 1022, 1182, 1266, 1401, 1421
SsiI	CCGC	7 cut(s)	82, 112, 132, 212, 347, 1678, 1934
SspMI	CTAG	6 cut(s)	416, 840, 1113, 1508, 1773, 1998
SstI	GAGCTC	4 cut(s)	530, 901, 1371, 1988
StyD4I	CCNGG	4 cut(s)	1117, 1312, 1911, 2003
StyI	CCWWGG	1 cut(s)	192
TaaI	ACNGT	5 cut(s)	13, 311, 770, 797, 1479
TaiI	ACGT	3 cut(s)	150, 859, 1098
TaqI	TCGA	5 cut(s)	153, 384, 853, 1459, 1671
TaqII	GACCGA	1 cut(s)	83
TasI	AATT	7 cut(s)	29, 282, 1022, 1182, 1266, 1401, 1421
TatI	WGTACW	2 cut(s)	1479, 1510
TauI	GCSGC	2 cut(s)	134, 214
TfiI	GAWTC	5 cut(s)	91, 164, 698, 1330, 1343
Tru1I	TTAA	6 cut(s)	459, 942, 1269, 1356, 1842, 2042
Tru9I	TTAA	6 cut(s)	459, 942, 1269, 1356, 1842, 2042
TscAI	CASTG	6 cut(s)	262, 760, 1194, 1208, 1384, 1726
TseFI	GTSAC	3 cut(s)	57, 1473, 1717
TseI	GCWGC	3 cut(s)	19, 1820, 1823
Tsp45I	GTSAC	3 cut(s)	57, 1473, 1717
TspGWI	ACGGA	2 cut(s)	20, 87
TspRI	CASTG	6 cut(s)	262, 760, 1194, 1208, 1384, 1726
Vha464I	CTTAAG	1 cut(s)	1841
VneI	GTGCAC	1 cut(s)	1869
VpaK11BI	GGWCC	5 cut(s)	37, 66, 726, 1437, 2024
XapI	RAATTY	2 cut(s)	29, 1182
XmnI	GAANNNNTTC	2 cut(s)	588, 1329
XspI	CTAG	6 cut(s)	416, 840, 1113, 1508, 1773, 1998

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.