No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24600 AT1G67920 |
| fragaria_vesca | FvH4_4g33670 FvH4_5g17640 |
| malus_domestica | MD16G1019400.v1.1 |
| prunus_persica | Prupe.1G332700_v2.0.a1 Prupe.5G236200_v2.0.a1 |
| pyrus_communis | pycom06g20600 pycom16g01740 |
| rosa_chinensis | RchiOBHm_Chr4g0443131 RchiOBHm_Chr7g0178031 |
| rosa_laevigata | RLG00000005480 |
| rosa_multiflora | Rmu_sc0007968.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00275270 Rroxscaffold_5G00383750 |
| rosa_rugosa | Rorug04G0344600 Rorug06G0412400 |
| rosa_samantha | Rh4DG405600 Rh7AG012000 Rh7BG011400 Rh7CG012000 Rh7DG012100 |
| rosa_wichuraiana | Rw4G034400 Rw7G000950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 208 |
| AciI | CCGC | 2 cut(s) | 184, 215 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 142 |
| AluBI | AGCT | 2 cut(s) | 69, 160 |
| AluI | AGCT | 2 cut(s) | 69, 160 |
| Alw21I | GWGCWC | 1 cut(s) | 9 |
| Alw26I | GTCTC | 2 cut(s) | 144, 163 |
| ApeKI | GCWGC | 4 cut(s) | 66, 148, 160, 227 |
| Bbv12I | GWGCWC | 1 cut(s) | 9 |
| BbvI | GCAGC | 4 cut(s) | 78, 147, 160, 214 |
| BcoDI | GTCTC | 2 cut(s) | 144, 163 |
| BfmI | CTRYAG | 1 cut(s) | 153 |
| BisI | GCNGC | 4 cut(s) | 67, 149, 161, 228 |
| BlsI | GCNGC | 4 cut(s) | 68, 150, 162, 229 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 165, 197 |
| BpmI | CTGGAG | 1 cut(s) | 164 |
| BsaBI | GATNNNNATC | 1 cut(s) | 104 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 142 |
| Bse8I | GATNNNNATC | 1 cut(s) | 104 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseJI | GATNNNNATC | 1 cut(s) | 104 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BseMII | CTCAG | 1 cut(s) | 158 |
| BseXI | GCAGC | 4 cut(s) | 78, 147, 160, 214 |
| BseYI | CCCAGC | 1 cut(s) | 217 |
| Bsh1236I | CGCG | 1 cut(s) | 208 |
| BsiHKAI | GWGCWC | 1 cut(s) | 9 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BsmAI | GTCTC | 2 cut(s) | 144, 163 |
| BsmBI | CGTCTC | 2 cut(s) | 144, 163 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| Bsp143I | GATC | 1 cut(s) | 105 |
| BspACI | CCGC | 2 cut(s) | 184, 215 |
| BspCNI | CTCAG | 1 cut(s) | 159 |
| BspFNI | CGCG | 1 cut(s) | 208 |
| BspMAI | CTGCAG | 1 cut(s) | 157 |
| BssMI | GATC | 1 cut(s) | 105 |
| Bst6I | CTCTTC | 1 cut(s) | 54 |
| BstC8I | GCNNGC | 2 cut(s) | 153, 200 |
| BstDEI | CTNAG | 1 cut(s) | 167 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstFNI | CGCG | 1 cut(s) | 208 |
| BstKTI | GATC | 1 cut(s) | 108 |
| BstMAI | GTCTC | 2 cut(s) | 144, 163 |
| BstMBI | GATC | 1 cut(s) | 105 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 157, 214 |
| BstSFI | CTRYAG | 1 cut(s) | 153 |
| BstUI | CGCG | 1 cut(s) | 208 |
| BstV1I | GCAGC | 4 cut(s) | 78, 147, 160, 214 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 2 cut(s) | 153, 200 |
| CviAII | CATG | 2 cut(s) | 52, 73 |
| CviJI | RGCY | 5 cut(s) | 69, 93, 151, 160, 227 |
| CviKI_1 | RGCY | 5 cut(s) | 69, 93, 151, 160, 227 |
| DdeI | CTNAG | 1 cut(s) | 167 |
| DpnI | GATC | 1 cut(s) | 107 |
| DpnII | GATC | 1 cut(s) | 105 |
| Eam1104I | CTCTTC | 1 cut(s) | 54 |
| EarI | CTCTTC | 1 cut(s) | 54 |
| EciI | GGCGGA | 1 cut(s) | 173 |
| Esp3I | CGTCTC | 2 cut(s) | 144, 163 |
| FaeI | CATG | 2 cut(s) | 55, 76 |
| FaiI | YATR | 3 cut(s) | 53, 74, 232 |
| FatI | CATG | 2 cut(s) | 51, 72 |
| Fnu4HI | GCNGC | 4 cut(s) | 67, 149, 161, 228 |
| FokI | GGATG | 1 cut(s) | 68 |
| Fsp4HI | GCNGC | 4 cut(s) | 67, 149, 161, 228 |
| GluI | GCNGC | 4 cut(s) | 67, 149, 161, 228 |
| GsaI | CCCAGC | 1 cut(s) | 221 |
| GsuI | CTGGAG | 1 cut(s) | 164 |
| Hin1II | CATG | 2 cut(s) | 55, 76 |
| HinfI | GANTC | 1 cut(s) | 174 |
| Hpy188III | TCNNGA | 1 cut(s) | 143 |
| HpyAV | CCTTC | 1 cut(s) | 188 |
| HpyCH4V | TGCA | 2 cut(s) | 155, 230 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 157, 214 |
| HpyF3I | CTNAG | 1 cut(s) | 167 |
| Hsp92II | CATG | 2 cut(s) | 55, 76 |
| Kzo9I | GATC | 1 cut(s) | 105 |
| LmnI | GCTCC | 2 cut(s) | 4, 145 |
| LpnPI | CCDG | 6 cut(s) | 31, 128, 165, 200, 203, 212 |
| Lsp1109I | GCAGC | 4 cut(s) | 78, 147, 160, 214 |
| MalI | GATC | 1 cut(s) | 107 |
| MboI | GATC | 1 cut(s) | 105 |
| MboII | GAAGA | 2 cut(s) | 71, 115 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MluCI | AATT | 1 cut(s) | 84 |
| MlyI | GAGTC | 1 cut(s) | 183 |
| MnlI | CCTC | 1 cut(s) | 55 |
| MspA1I | CMGCKG | 1 cut(s) | 217 |
| MvnI | CGCG | 1 cut(s) | 208 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 157, 214 |
| NdeII | GATC | 1 cut(s) | 105 |
| NlaIII | CATG | 2 cut(s) | 55, 76 |
| PkrI | GCNGC | 4 cut(s) | 68, 150, 162, 229 |
| PleI | GAGTC | 1 cut(s) | 182 |
| PpsI | GAGTC | 1 cut(s) | 182 |
| PspFI | CCCAGC | 1 cut(s) | 217 |
| PstI | CTGCAG | 1 cut(s) | 157 |
| SatI | GCNGC | 4 cut(s) | 67, 149, 161, 228 |
| Sau3AI | GATC | 1 cut(s) | 105 |
| SchI | GAGTC | 1 cut(s) | 183 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SetI | ASST | 2 cut(s) | 71, 162 |
| SfcI | CTRYAG | 1 cut(s) | 153 |
| Sse9I | AATT | 1 cut(s) | 84 |
| SsiI | CCGC | 2 cut(s) | 184, 215 |
| TasI | AATT | 1 cut(s) | 84 |
| TseI | GCWGC | 4 cut(s) | 66, 148, 160, 227 |
| TspDTI | ATGAA | 2 cut(s) | 72, 116 |