No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24600 AT1G67920 |
| fragaria_vesca | FvH4_4g33670 FvH4_5g17640 |
| malus_domestica | MD16G1019400.v1.1 |
| prunus_persica | Prupe.1G332700_v2.0.a1 Prupe.5G236200_v2.0.a1 |
| pyrus_communis | pycom06g20600 pycom16g01740 |
| rosa_chinensis | RchiOBHm_Chr4g0443131 RchiOBHm_Chr7g0178031 |
| rosa_laevigata | RLG00000005480 |
| rosa_multiflora | Rmu_sc0007968.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00275270 Rroxscaffold_5G00383750 |
| rosa_rugosa | Rorug04G0344600 Rorug06G0412400 |
| rosa_samantha | Rh4DG405600 Rh7AG012000 Rh7BG011400 Rh7CG012000 Rh7DG012100 |
| rosa_wichuraiana | Rw4G034400 Rw7G000950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AjnI | CCWGG | 1 cut(s) | 179 |
| AluBI | AGCT | 1 cut(s) | 187 |
| AluI | AGCT | 1 cut(s) | 187 |
| Alw21I | GWGCWC | 1 cut(s) | 156 |
| Alw26I | GTCTC | 1 cut(s) | 139 |
| AoxI | GGCC | 1 cut(s) | 218 |
| ApeKI | GCWGC | 1 cut(s) | 184 |
| AsuC2I | CCSGG | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 1 cut(s) | 157 |
| Bbv12I | GWGCWC | 1 cut(s) | 156 |
| BbvI | GCAGC | 1 cut(s) | 196 |
| BccI | CCATC | 1 cut(s) | 52 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 173, 207 |
| BciT130I | CCWGG | 1 cut(s) | 181 |
| BcnI | CCSGG | 1 cut(s) | 129 |
| BcoDI | GTCTC | 1 cut(s) | 139 |
| BisI | GCNGC | 1 cut(s) | 185 |
| BlsI | GCNGC | 1 cut(s) | 186 |
| Bme1390I | CCNGG | 2 cut(s) | 129, 181 |
| BmrFI | CCNGG | 2 cut(s) | 129, 181 |
| BpuMI | CCSGG | 1 cut(s) | 129 |
| BsaI | GGTCTC | 1 cut(s) | 139 |
| Bse1I | ACTGG | 2 cut(s) | 68, 125 |
| BseBI | CCWGG | 1 cut(s) | 181 |
| BseMII | CTCAG | 1 cut(s) | 169 |
| BseNI | ACTGG | 2 cut(s) | 68, 125 |
| BseRI | GAGGAG | 1 cut(s) | 68 |
| BseXI | GCAGC | 1 cut(s) | 196 |
| BshFI | GGCC | 1 cut(s) | 220 |
| BsiHKAI | GWGCWC | 1 cut(s) | 156 |
| BsiSI | CCGG | 2 cut(s) | 128, 137 |
| BsmAI | GTCTC | 1 cut(s) | 139 |
| BsnI | GGCC | 1 cut(s) | 220 |
| Bso31I | GGTCTC | 1 cut(s) | 139 |
| Bsp1286I | GDGCHC | 1 cut(s) | 156 |
| Bsp143I | GATC | 2 cut(s) | 90, 194 |
| BspANI | GGCC | 1 cut(s) | 220 |
| BspCNI | CTCAG | 1 cut(s) | 168 |
| BspTNI | GGTCTC | 1 cut(s) | 139 |
| BsrI | ACTGG | 2 cut(s) | 68, 125 |
| BssMI | GATC | 2 cut(s) | 90, 194 |
| Bst2UI | CCWGG | 1 cut(s) | 181 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| Bst6I | CTCTTC | 1 cut(s) | 8 |
| BstC8I | GCNNGC | 1 cut(s) | 218 |
| BstDEI | CTNAG | 2 cut(s) | 155, 240 |
| BstKTI | GATC | 2 cut(s) | 93, 197 |
| BstMAI | GTCTC | 1 cut(s) | 139 |
| BstMBI | GATC | 2 cut(s) | 90, 194 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 133 |
| BstNI | CCWGG | 1 cut(s) | 181 |
| BstSCI | CCNGG | 2 cut(s) | 127, 179 |
| BstV1I | GCAGC | 1 cut(s) | 196 |
| BsuRI | GGCC | 1 cut(s) | 220 |
| Cac8I | GCNNGC | 1 cut(s) | 218 |
| CviJI | RGCY | 4 cut(s) | 78, 136, 187, 220 |
| CviKI_1 | RGCY | 4 cut(s) | 78, 136, 187, 220 |
| DdeI | CTNAG | 2 cut(s) | 155, 240 |
| DpnI | GATC | 2 cut(s) | 92, 196 |
| DpnII | GATC | 2 cut(s) | 90, 194 |
| Eam1104I | CTCTTC | 1 cut(s) | 8 |
| EarI | CTCTTC | 1 cut(s) | 8 |
| Eco31I | GGTCTC | 1 cut(s) | 139 |
| Eco32I | GATATC | 1 cut(s) | 163 |
| EcoRII | CCWGG | 1 cut(s) | 179 |
| EcoRV | GATATC | 1 cut(s) | 163 |
| FaiI | YATR | 1 cut(s) | 41 |
| Fnu4HI | GCNGC | 1 cut(s) | 185 |
| Fsp4HI | GCNGC | 1 cut(s) | 185 |
| GluI | GCNGC | 1 cut(s) | 185 |
| HaeIII | GGCC | 1 cut(s) | 220 |
| HapII | CCGG | 2 cut(s) | 128, 137 |
| HinfI | GANTC | 2 cut(s) | 101, 236 |
| HpaII | CCGG | 2 cut(s) | 128, 137 |
| HphI | GGTGA | 1 cut(s) | 157 |
| Hpy166II | GTNNAC | 1 cut(s) | 73 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 158 |
| Hpy188III | TCNNGA | 2 cut(s) | 172, 192 |
| Hpy8I | GTNNAC | 1 cut(s) | 73 |
| Hpy99I | CGWCG | 2 cut(s) | 178, 233 |
| HpyAV | CCTTC | 1 cut(s) | 38 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 133 |
| HpyF3I | CTNAG | 2 cut(s) | 155, 240 |
| Kzo9I | GATC | 2 cut(s) | 90, 194 |
| LpnPI | CCDG | 9 cut(s) | 19, 81, 106, 141, 150, 162, 166, 193, 202 |
| Lsp1109I | GCAGC | 1 cut(s) | 196 |
| MaeIII | GTNAC | 2 cut(s) | 169, 233 |
| MalI | GATC | 2 cut(s) | 92, 196 |
| MboI | GATC | 2 cut(s) | 90, 194 |
| MboII | GAAGA | 3 cut(s) | 16, 25, 100 |
| MhlI | GDGCHC | 1 cut(s) | 156 |
| MlyI | GAGTC | 1 cut(s) | 230 |
| MnlI | CCTC | 3 cut(s) | 9, 46, 78 |
| MspI | CCGG | 2 cut(s) | 128, 137 |
| MspR9I | CCNGG | 2 cut(s) | 129, 181 |
| MvaI | CCWGG | 1 cut(s) | 181 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 133 |
| NciI | CCSGG | 1 cut(s) | 129 |
| NdeII | GATC | 2 cut(s) | 90, 194 |
| NmuCI | GTSAC | 2 cut(s) | 169, 233 |
| PfeI | GAWTC | 1 cut(s) | 101 |
| PkrI | GCNGC | 1 cut(s) | 186 |
| PleI | GAGTC | 1 cut(s) | 230 |
| PpsI | GAGTC | 1 cut(s) | 230 |
| Psp6I | CCWGG | 1 cut(s) | 179 |
| PspGI | CCWGG | 1 cut(s) | 179 |
| SatI | GCNGC | 1 cut(s) | 185 |
| Sau3AI | GATC | 2 cut(s) | 90, 194 |
| SchI | GAGTC | 1 cut(s) | 230 |
| ScrFI | CCNGG | 2 cut(s) | 129, 181 |
| SduI | GDGCHC | 1 cut(s) | 156 |
| SetI | ASST | 2 cut(s) | 151, 189 |
| StyD4I | CCNGG | 2 cut(s) | 127, 179 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TaqI | TCGA | 2 cut(s) | 117, 193 |
| TfiI | GAWTC | 1 cut(s) | 101 |
| TseFI | GTSAC | 2 cut(s) | 169, 233 |
| TseI | GCWGC | 1 cut(s) | 184 |
| Tsp45I | GTSAC | 2 cut(s) | 169, 233 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 217 |