Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0015432

Physical Location & Seq

Genomic Coordinates Reverse (-)

3034248 .. 3036743

Gene Structure 2496 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005952

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGGCAGCTTCAAAGATGGTAATGGCTTCTCTCACGGCCATTCGGCCTCTAAGTTGCGCCGCCTCGGCTTCAGCCTCAGCCTCTTATCCTGGGCGTTTGGCCCCTCACCCACCGGACCTTATCAAATGGGTCCGCCGGGAAGGTGGGTTCGTTCACGAGGCCGTGAAAATAGCTCAAGACGCTTCCTTTGGTCTTGGACTCGTGGCTTCTGAGGAAATTCCGAAAGGGTCTGAGCTTGTTGTCCTTCCCGAGCACGTACCCTTGAGATTTGGCCCTCTTGAATCGGACGGCGGAGATGGGGCTGACCCTGTTCTTGCTAATTTGGCTCGCCAAGTTCCCGAAGAGCTGTGGGCAATGAAATTGGGTTTGAAGCTTCTGCAAGAAAGAGCCAGAGTTGGATCCTTCTGGTGGCCATACATTAGCAACCTCCCTGAAGCATTTAACGTACCTATCTTCTTCCCTGGAGAGGACATAAAGAATTTGCAGTATGCCCCAGTTCTTTACCAGGTAAACAAGAGATGCAGATTTCTTCTTGAATTTGAACAAGAAGTCAGACGTGCTCTTGAAGATAACAAACCAAGTGATCACCCTTTTGATGGCCAAGCTGTGGGTGCATCAGCCCTTGGATGGGCCATGTCAGCAGTTTCTTCTCGGGCATTCCGTTTATATGGTAAAAAGCTTGCAGATGGGATCTATGATGATGTCCCCATGATGCTTCCTCTTATCGATATGTGCAACCATAGTTTCAAGCCAAATGCGCGAATACTTCAAGACCAAGATGACAGGAACAAGAAGATGCTAGTAAAGGTTGTGGCTGAAACAGAGATCAAACAGAACGATTGCTTAGAACTCAACTATGGAGGTGTGAACAATGATCTTTTCCTACTGGATTATGGATTTGTGGTACCTTCAAACCCCTACGATTGTATTGAGCTGAAATATGATGGAGCATTTTTGGATGCTGCGAGTATGGCTGCTGGAGTATCATCACCCAACTTTTCTGCACCAGCTCCATGGCAGAAAGAAATATTGTGCCAGCTAAATTTAGACGGGAAGGCTCCTTTTCTCAAGGTATGCGTTGGGGGTTCAGAGTTGGTTGAGGGACGACTGTTGGCAGCCTTGAGAGTTGTTCTTGCCAGTGACGTAGAAGCAGTGCAGAAGCATGATTTAAATACACTTAAATCTATATCAGTTGAAGCGCCCCTCGGTATTGCAAATGAGGTAGCTGCTTTTCGCACCATTATTGCACTATGTGTGATTGCACTCGGACACTTCCCAACCAAAATCATGGAGGATGAATCCTTGTTACAAAAGGGTGTTTCAGATTCTACCGAGTTGGCTATCCAGTTCAGAATTCAGAAGAAAAGTGTCATTATAGATGTGATGAGAGATCTCACAAGGAGGGTGAAGTTACTTCCATCGAAAGAAACAGCCACTGCTCAAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003713 GO:0003824 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010452 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018023 GO:0018024 GO:0018026 GO:0018027 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032259 GO:0034968 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0045893 GO:0045935 GO:0046975 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:0140110 GO:1901564 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rubis-subs-bind SET

Protein Analysis

483

Amino Acids

52.77

Weight (kDa)

5.57

Isoelectric Point (pI)

43.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rubis-subs-bind	PF09273	336 - 457	2.8e-17	Rubisco LSMT substrate-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24610
fragaria_vesca	FvH4_4g33660
malus_domestica	MD13G1020900.v1.1 MD16G1019300.v1.1
prunus_persica	Prupe.1G332800_v2.0.a1
pyrus_communis	pycom13g01770 pycom16g01730
rosa_chinensis	RchiOBHm_Chr4g0443121
rosa_laevigata	RLG00000005952
rosa_multiflora	Rmu_sc0007968.1_g000013
rosa_roxburghii	Rroxscaffold_5G00383740
rosa_rugosa	Rorug04G0344600
rosa_samantha	Rh4BG410500 Rh4CG426000 Rh4DG405500
rosa_wichuraiana	Rw4G034390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	904
AccB1I	GGYRCC	1 cut(s)	904
AccB7I	CCANNNNNTGG	1 cut(s)	607
AccII	CGCG	1 cut(s)	760
AciI	CCGC	3 cut(s)	60, 133, 291
AclWI	GGATC	3 cut(s)	393, 406, 698
AcoI	YGGCCR	3 cut(s)	36, 410, 598
AcsI	RAATTY	5 cut(s)	216, 478, 536, 1042, 1353
AcuI	CTGAAG	2 cut(s)	54, 453
AdeI	CACNNNGTG	1 cut(s)	1253
AfaI	GTAC	3 cut(s)	258, 447, 906
AfiI	CCNNNNNNNGG	6 cut(s)	408, 466, 596, 607, 627, 628
AjiI	CACGTC	1 cut(s)	557
AjnI	CCWGG	3 cut(s)	88, 460, 504
AloI	GAACNNNNNNTCC	2 cut(s)	131, 163
Alw21I	GWGCWC	2 cut(s)	255, 562
AlwI	GGATC	3 cut(s)	393, 406, 698
AlwNI	CAGNNNCTG	1 cut(s)	1436
Ama87I	CYCGRG	2 cut(s)	248, 651
AoxI	GGCC	8 cut(s)	36, 44, 99, 159, 271, 410, 598, 630
ApeKI	GCWGC	5 cut(s)	5, 962, 974, 1115, 1226
ApoI	RAATTY	5 cut(s)	216, 478, 536, 1042, 1353
ArsI	GACNNNNNNTTYG	2 cut(s)	170, 202
Asp718I	GGTACC	1 cut(s)	904
AspLEI	GCGC	3 cut(s)	59, 760, 1201
AspS9I	GGNCC	5 cut(s)	100, 115, 130, 272, 630
AsuC2I	CCSGG	1 cut(s)	137
AsuHPI	GGTGA	4 cut(s)	98, 578, 981, 1417
AvaI	CYCGRG	2 cut(s)	248, 651
AvaII	GGWCC	2 cut(s)	115, 130
BalI	TGGCCA	2 cut(s)	412, 600
BamHI	GGATCC	1 cut(s)	398
BanI	GGYRCC	1 cut(s)	904
BauI	CACGAG	2 cut(s)	155, 200
Bbv12I	GWGCWC	2 cut(s)	255, 562
BbvCI	CCTCAGC	1 cut(s)	76
BbvI	GCAGC	5 cut(s)	17, 949, 961, 1127, 1213
BccI	CCATC	7 cut(s)	10, 290, 590, 621, 680, 938, 1426
BceAI	ACGGC	3 cut(s)	51, 146, 304
BciT130I	CCWGG	3 cut(s)	90, 462, 506
BclI	TGATCA	1 cut(s)	583
BcnI	CCSGG	1 cut(s)	137
BfaI	CTAG	1 cut(s)	800
BfoI	RGCGCY	1 cut(s)	1202
BglI	GCCNNNNNGGC	1 cut(s)	65
BglII	AGATCT	1 cut(s)	1390
BisI	GCNGC	6 cut(s)	6, 60, 963, 975, 1116, 1227
BlsI	GCNGC	6 cut(s)	7, 61, 964, 976, 1117, 1228
Bme1390I	CCNGG	4 cut(s)	90, 137, 462, 506
Bme18I	GGWCC	2 cut(s)	115, 130
BmeT110I	CYCGRG	2 cut(s)	248, 651
BmgBI	CACGTC	1 cut(s)	557
BmgT120I	GGNCC	5 cut(s)	100, 115, 130, 272, 630
BmiI	GGNNCC	5 cut(s)	102, 131, 400, 906, 1059
BmrFI	CCNGG	4 cut(s)	90, 137, 462, 506
BmrI	ACTGGG	1 cut(s)	488
BmsI	GCATC	5 cut(s)	509, 623, 702, 786, 949
BmuI	ACTGGG	1 cut(s)	488
BpmI	CTGGAG	2 cut(s)	483, 999
Bpu10I	CCTNAGC	1 cut(s)	76
BpuEI	CTTGAG	5 cut(s)	159, 283, 1052, 1141, 1425
BpuMI	CCSGG	1 cut(s)	137
Bsa29I	ATCGAT	1 cut(s)	726
BsaAI	YACGTR	1 cut(s)	256
BsaJI	CCNNGG	6 cut(s)	63, 89, 460, 622, 1013, 1204
BsaWI	WCCGGW	1 cut(s)	112
Bsc4I	CCNNNNNNNGG	6 cut(s)	408, 466, 596, 607, 627, 628
Bse1I	ACTGG	4 cut(s)	494, 891, 1137, 1345
Bse3DI	GCAATG	1 cut(s)	360
BseBI	CCWGG	3 cut(s)	90, 462, 506
BseCI	ATCGAT	1 cut(s)	726
BseDI	CCNNGG	6 cut(s)	63, 89, 460, 622, 1013, 1204
BseGI	GGATG	3 cut(s)	632, 964, 1300
BseLI	CCNNNNNNNGG	6 cut(s)	408, 466, 596, 607, 627, 628
BseMI	GCAATG	1 cut(s)	360
BseMII	CTCAG	3 cut(s)	90, 201, 222
BseNI	ACTGG	4 cut(s)	494, 891, 1137, 1345
BseXI	GCAGC	5 cut(s)	17, 949, 961, 1127, 1213
BsgI	GTGCAG	2 cut(s)	987, 1175
Bsh1236I	CGCG	1 cut(s)	760
BshFI	GGCC	8 cut(s)	38, 46, 101, 161, 273, 412, 600, 632
BshNI	GGYRCC	1 cut(s)	904
BshVI	ATCGAT	1 cut(s)	726
BsiHKAI	GWGCWC	2 cut(s)	255, 562
BsiHKCI	CYCGRG	2 cut(s)	248, 651
BsiSI	CCGG	2 cut(s)	113, 136
BslFI	GGGAC	2 cut(s)	689, 1116
BslI	CCNNNNNNNGG	6 cut(s)	408, 466, 596, 607, 627, 628
BsmFI	GGGAC	2 cut(s)	689, 1116
BsmI	GAATGC	1 cut(s)	656
BsnI	GGCC	8 cut(s)	38, 46, 101, 161, 273, 412, 600, 632
BsoBI	CYCGRG	2 cut(s)	248, 651
Bsp1286I	GDGCHC	2 cut(s)	255, 562
Bsp143I	GATC	6 cut(s)	398, 583, 690, 825, 874, 1390
Bsp19I	CCATGG	1 cut(s)	1013
BspACI	CCGC	3 cut(s)	60, 133, 291
BspANI	GGCC	8 cut(s)	38, 46, 101, 161, 273, 412, 600, 632
BspCNI	CTCAG	3 cut(s)	89, 202, 223
BspDI	ATCGAT	1 cut(s)	726
BspFNI	CGCG	1 cut(s)	760
BspLI	GGNNCC	5 cut(s)	102, 131, 400, 906, 1059
BspPI	GGATC	3 cut(s)	393, 406, 698
BspQI	GCTCTTC	1 cut(s)	336
BspT107I	GGYRCC	1 cut(s)	904
BsrDI	GCAATG	1 cut(s)	360
BsrI	ACTGG	4 cut(s)	494, 891, 1137, 1345
BssECI	CCNNGG	6 cut(s)	63, 89, 460, 622, 1013, 1204
BssMI	GATC	6 cut(s)	398, 583, 690, 825, 874, 1390
BssSI	CACGAG	2 cut(s)	155, 200
BssT1I	CCWWGG	2 cut(s)	622, 1013
Bst2BI	CACGAG	2 cut(s)	155, 200
Bst2UI	CCWGG	3 cut(s)	90, 462, 506
Bst4CI	ACNGT	1 cut(s)	1110
Bst6I	CTCTTC	1 cut(s)	336
BstBAI	YACGTR	1 cut(s)	256
BstC8I	GCNNGC	3 cut(s)	328, 681, 1037
BstDEI	CTNAG	5 cut(s)	50, 76, 210, 231, 844
BstDSI	CCRYGG	1 cut(s)	1013
BstF5I	GGATG	3 cut(s)	632, 964, 1300
BstFNI	CGCG	1 cut(s)	760
BstH2I	RGCGCY	1 cut(s)	1202
BstHHI	GCGC	3 cut(s)	59, 760, 1201
BstKTI	GATC	6 cut(s)	401, 586, 693, 828, 877, 1393
BstMBI	GATC	6 cut(s)	398, 583, 690, 825, 874, 1390
BstMWI	GCNNNNNNNGC	7 cut(s)	65, 179, 323, 611, 638, 757, 971
BstNI	CCWGG	3 cut(s)	90, 462, 506
BstSCI	CCNGG	4 cut(s)	88, 135, 460, 504
BstUI	CGCG	1 cut(s)	760
BstV1I	GCAGC	5 cut(s)	17, 949, 961, 1127, 1213
BstX2I	RGATCY	3 cut(s)	398, 690, 1390
BstXI	CCANNNNNNTGG	2 cut(s)	1014, 1288
BstYI	RGATCY	3 cut(s)	398, 690, 1390
Bsu15I	ATCGAT	1 cut(s)	726
BsuRI	GGCC	8 cut(s)	38, 46, 101, 161, 273, 412, 600, 632
BsuTUI	ATCGAT	1 cut(s)	726
BtgI	CCRYGG	1 cut(s)	1013
BtrI	CACGTC	1 cut(s)	557
BtsCI	GGATG	3 cut(s)	632, 964, 1300
BtsI	GCAGTG	2 cut(s)	1158, 1434
BtsIMutI	CAGTG	3 cut(s)	1144, 1158, 1434
Cac8I	GCNNGC	3 cut(s)	328, 681, 1037
CaiI	CAGNNNCTG	1 cut(s)	1436
CfoI	GCGC	3 cut(s)	59, 760, 1201
Cfr13I	GGNCC	5 cut(s)	100, 115, 130, 272, 630
ClaI	ATCGAT	1 cut(s)	726
CseI	GACGC	1 cut(s)	188
CsiI	ACCWGGT	1 cut(s)	504
Csp6I	GTAC	3 cut(s)	257, 446, 905
CviAII	CATG	5 cut(s)	634, 709, 1014, 1163, 1288
CviQI	GTAC	3 cut(s)	257, 446, 905
DdeI	CTNAG	5 cut(s)	50, 76, 210, 231, 844
DpnI	GATC	6 cut(s)	400, 585, 692, 827, 876, 1392
DpnII	GATC	6 cut(s)	398, 583, 690, 825, 874, 1390
DraI	TTTAAA	1 cut(s)	1170
DraIII	CACNNNGTG	1 cut(s)	1253
EaeI	YGGCCR	3 cut(s)	36, 410, 598
Eam1104I	CTCTTC	1 cut(s)	336
EarI	CTCTTC	1 cut(s)	336
EciI	GGCGGA	2 cut(s)	122, 306
Eco130I	CCWWGG	2 cut(s)	622, 1013
Eco47I	GGWCC	2 cut(s)	115, 130
Eco57I	CTGAAG	2 cut(s)	54, 453
Eco88I	CYCGRG	2 cut(s)	248, 651
EcoRI	GAATTC	1 cut(s)	1353
EcoRII	CCWGG	3 cut(s)	88, 460, 504
EcoT14I	CCWWGG	2 cut(s)	622, 1013
ErhI	CCWWGG	2 cut(s)	622, 1013
FaeI	CATG	5 cut(s)	637, 712, 1017, 1166, 1291
FaqI	GGGAC	2 cut(s)	689, 1116
FatI	CATG	5 cut(s)	633, 708, 1013, 1162, 1287
FbaI	TGATCA	1 cut(s)	583
Fnu4HI	GCNGC	6 cut(s)	6, 60, 963, 975, 1116, 1227
FokI	GGATG	3 cut(s)	639, 971, 1307
Fsp4HI	GCNGC	6 cut(s)	6, 60, 963, 975, 1116, 1227
FspBI	CTAG	1 cut(s)	800
GlaI	GCGC	3 cut(s)	58, 759, 1200
GluI	GCNGC	6 cut(s)	6, 60, 963, 975, 1116, 1227
GsuI	CTGGAG	2 cut(s)	483, 999
HaeII	RGCGCY	1 cut(s)	1202
HaeIII	GGCC	8 cut(s)	38, 46, 101, 161, 273, 412, 600, 632
HapII	CCGG	2 cut(s)	113, 136
HgaI	GACGC	1 cut(s)	188
HhaI	GCGC	3 cut(s)	59, 760, 1201
Hin1II	CATG	5 cut(s)	637, 712, 1017, 1166, 1291
Hin6I	GCGC	3 cut(s)	57, 758, 1199
HinP1I	GCGC	3 cut(s)	57, 758, 1199
HindIII	AAGCTT	2 cut(s)	371, 677
HinfI	GANTC	4 cut(s)	198, 281, 1298, 1325
HpaII	CCGG	2 cut(s)	113, 136
HphI	GGTGA	4 cut(s)	98, 578, 981, 1417
Hpy166II	GTNNAC	3 cut(s)	154, 511, 868
Hpy188III	TCNNGA	8 cut(s)	155, 176, 248, 278, 338, 533, 563, 770
Hpy8I	GTNNAC	3 cut(s)	154, 511, 868
HpyAV	CCTTC	5 cut(s)	134, 254, 412, 918, 1048
HpyCH4III	ACNGT	1 cut(s)	1110
HpyCH4IV	ACGT	4 cut(s)	255, 444, 556, 1143
HpyF10VI	GCNNNNNNNGC	7 cut(s)	65, 179, 323, 611, 638, 757, 971
HpyF3I	CTNAG	5 cut(s)	50, 76, 210, 231, 844
HpySE526I	ACGT	4 cut(s)	255, 444, 556, 1143
Hsp92II	CATG	5 cut(s)	637, 712, 1017, 1166, 1291
HspAI	GCGC	3 cut(s)	57, 758, 1199
KpnI	GGTACC	1 cut(s)	908
Ksp22I	TGATCA	1 cut(s)	583
Kzo9I	GATC	6 cut(s)	398, 583, 690, 825, 874, 1390
LguI	GCTCTTC	1 cut(s)	336
LmnI	GCTCC	3 cut(s)	947, 1015, 1063
Lsp1109I	GCAGC	5 cut(s)	17, 949, 961, 1127, 1213
LweI	GCATC	5 cut(s)	509, 623, 702, 786, 949
MabI	ACCWGGT	1 cut(s)	504
MaeI	CTAG	1 cut(s)	800
MaeII	ACGT	4 cut(s)	255, 444, 556, 1143
MaeIII	GTNAC	3 cut(s)	1139, 1305, 1410
MalI	GATC	6 cut(s)	400, 585, 692, 827, 876, 1392
MboI	GATC	6 cut(s)	398, 583, 690, 825, 874, 1390
MboII	GAAGA	8 cut(s)	353, 445, 448, 521, 578, 639, 805, 1372
MflI	RGATCY	3 cut(s)	398, 690, 1390
MhlI	GDGCHC	2 cut(s)	255, 562
MlsI	TGGCCA	2 cut(s)	412, 600
MluCI	AATT	7 cut(s)	216, 319, 359, 478, 536, 1042, 1353
MluNI	TGGCCA	2 cut(s)	412, 600
MlyI	GAGTC	1 cut(s)	192
MmeI	TCCRAC	1 cut(s)	376
Mox20I	TGGCCA	2 cut(s)	412, 600
MscI	TGGCCA	2 cut(s)	412, 600
MseI	TTAA	3 cut(s)	441, 1169, 1179
Msp20I	TGGCCA	2 cut(s)	412, 600
MspI	CCGG	2 cut(s)	113, 136
MspR9I	CCNGG	4 cut(s)	90, 137, 462, 506
Mva1269I	GAATGC	1 cut(s)	656
MvaI	CCWGG	3 cut(s)	90, 462, 506
MvnI	CGCG	1 cut(s)	760
MwoI	GCNNNNNNNGC	7 cut(s)	65, 179, 323, 611, 638, 757, 971
NciI	CCSGG	1 cut(s)	137
NcoI	CCATGG	1 cut(s)	1013
NdeII	GATC	6 cut(s)	398, 583, 690, 825, 874, 1390
NlaIII	CATG	5 cut(s)	637, 712, 1017, 1166, 1291
NlaIV	GGNNCC	5 cut(s)	102, 131, 400, 906, 1059
NmeAIII	GCCGAG	1 cut(s)	44
NmuCI	GTSAC	1 cut(s)	1139
PciSI	GCTCTTC	1 cut(s)	336
PcsI	WCGNNNNNNNCGW	1 cut(s)	658
PctI	GAATGC	1 cut(s)	656
PfeI	GAWTC	3 cut(s)	281, 1298, 1325
PflMI	CCANNNNNTGG	1 cut(s)	607
PkrI	GCNGC	6 cut(s)	7, 61, 964, 976, 1117, 1228
PleI	GAGTC	1 cut(s)	192
PpsI	GAGTC	1 cut(s)	192
Ppu21I	YACGTR	1 cut(s)	256
Psp6I	CCWGG	3 cut(s)	88, 460, 504
PspGI	CCWGG	3 cut(s)	88, 460, 504
PspN4I	GGNNCC	5 cut(s)	102, 131, 400, 906, 1059
PspPI	GGNCC	5 cut(s)	100, 115, 130, 272, 630
PstNI	CAGNNNCTG	1 cut(s)	1436
PsuI	RGATCY	3 cut(s)	398, 690, 1390
RsaI	GTAC	3 cut(s)	258, 447, 906
RsaNI	GTAC	3 cut(s)	257, 446, 905
SapI	GCTCTTC	1 cut(s)	336
SaqAI	TTAA	3 cut(s)	441, 1169, 1179
SatI	GCNGC	6 cut(s)	6, 60, 963, 975, 1116, 1227
Sau3AI	GATC	6 cut(s)	398, 583, 690, 825, 874, 1390
Sau96I	GGNCC	5 cut(s)	100, 115, 130, 272, 630
SchI	GAGTC	1 cut(s)	192
ScrFI	CCNGG	4 cut(s)	90, 137, 462, 506
SduI	GDGCHC	2 cut(s)	255, 562
SexAI	ACCWGGT	1 cut(s)	504
SfaNI	GCATC	5 cut(s)	509, 623, 702, 786, 949
SinI	GGWCC	2 cut(s)	115, 130
SmiI	ATTTAAAT	1 cut(s)	1170
SmlI	CTYRAG	5 cut(s)	174, 262, 1067, 1120, 1440
SmoI	CTYRAG	5 cut(s)	174, 262, 1067, 1120, 1440
Sse9I	AATT	7 cut(s)	216, 319, 359, 478, 536, 1042, 1353
SsiI	CCGC	3 cut(s)	60, 133, 291
SspI	AATATT	1 cut(s)	1029
SspMI	CTAG	1 cut(s)	800
StyD4I	CCNGG	4 cut(s)	88, 135, 460, 504
StyI	CCWWGG	2 cut(s)	622, 1013
SwaI	ATTTAAAT	1 cut(s)	1170
TaaI	ACNGT	1 cut(s)	1110
TaiI	ACGT	4 cut(s)	258, 447, 559, 1146
TaqI	TCGA	2 cut(s)	726, 1421
TasI	AATT	7 cut(s)	216, 319, 359, 478, 536, 1042, 1353
TauI	GCSGC	1 cut(s)	62
TfiI	GAWTC	3 cut(s)	281, 1298, 1325
Tru1I	TTAA	3 cut(s)	441, 1169, 1179
Tru9I	TTAA	3 cut(s)	441, 1169, 1179
TscAI	CASTG	3 cut(s)	1144, 1158, 1441
TseFI	GTSAC	1 cut(s)	1139
TseI	GCWGC	5 cut(s)	5, 962, 974, 1115, 1226
Tsp45I	GTSAC	1 cut(s)	1139
TspDTI	ATGAA	2 cut(s)	371, 1311
TspGWI	ACGGA	1 cut(s)	650
TspRI	CASTG	3 cut(s)	1144, 1158, 1441
Van91I	CCANNNNNTGG	1 cut(s)	607
VpaK11BI	GGWCC	2 cut(s)	115, 130
XapI	RAATTY	5 cut(s)	216, 478, 536, 1042, 1353
XspI	CTAG	1 cut(s)	800

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.