Prupe.1G379000_v2.0.a1

Cytosolic purine 5'-nucleotidase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
34234867 .. 34240253
5387 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G379000.7

Sequence Viewer

Length: 1947 bp
ATGTTCCTTGCTCCAACACTTCCACTGCAATTTCCTAATCCCATCGCCATTGGCATCTCCCCTAATATTCCCGAATCCGATTCTCTCTCACTTACTCCTCATCCTCTCCCCAAATGCCTATTTAAATCAATCATGCGAATTCCCAAGAAACCCGCTTCCTTCTGCCTCGCTTTGTTTTCACCTGACCTCTCCACTTCCCCTTCCTCTCTCTCTCCCCCCTTTCGCTTCACTTCCGCCATTCTCAGGAAATCAGATCGCTCCCGCTCTCCTGGAAAAAGAAAAGGCATTCATACCGTAGGAAGTAGTCCATTGCATGCCAGCTATTCAATGGAAAAAGGCTACGAGACTGCTGTAGGAGGTGACAACTCTTCACGTTTTTCACATATGGGTTCCAGTGATGGTGGTCAACAGCCATGTGTATGGTCATCTCCCCAAGGAGGATGTAAAATTGACATAAGAAAGCAGATCTTCTGCAACAGATCGTTGAATATGAAGAGTATTCTTGCAGTAGGGTTTGATATGGATTACACATTGGCACAATACAAGCCTGAAACCTTTGAGTCTCTTGCATATGATGGAACTATCCGGAAATTGGTGTATGATTTAGGATACCCACGTGAGTTGCTGGATTGGTCCTTTGATTGGACATATATGGTCAGAGGCTTGGTTCTGGATAAGAAAAGAGGAAACATCTTGAAGATGGATCGGCATAAGTATGTGAAAGTTGCCTACCATGGATTCAAAGAGTTGTCTAAGGAAGATAAAGTTGGCACCTATGGAAATACCTTAATACGGGATTCCTTTGATGAGCCTGATTATGCTCTCATTGATACCCTCTTTTCTTTAGCTGAAGCTTACCTATTTGCTCAATTGGTAGACTTTAAAGACAAAAATCTGGAAAAAATTCCGAAGGGTGCCGATTACTCTGTTATGTATAAGGATGTTCGAGCTGCAGTTGATTTGTGCCACCGTGATGGAACTTTAAAGCAAATGGTAGCAAAAGACCCTAAAAGGTATATTAATGAAGATACAACCATAGTTCCCATGCTCAAAATGCTGAGAGATTCTGGCCGTGCTACTTTTTTGGTGACAAACAGTTTATGGGACTACACGAACATAGTAATGAATTTCCTCTGTGGGTCACGCACATTAGATGGTGGTAGAAAATGCAATTTTGACTGGCTTCAATACTTTGATGTTGTCATCACTGGCAGTGCAAAGCCAAGCTTCTTCCATGAAGGTAATCGTGCTAATCTGTTTGAGGTTGATCATGAGTCTGGGATGCTACTTAATACTGATAATGGTTCTCCTATGGCTCAGGTTGGAAGTTCTTCACCTAGATTATCACTGAAGGGAGTTAAGGCTTGTAGAGTTTTTCAGGGAGGCAGTGTTGGTCATCTTCATAAACTGCTTTCAATTGAGTCAAGTTCACAGGTTCTCTATGTTGGTGATCATATATATGGAGATATTTTGCGCAGCAAAAAGGTTCTTGGGTGGAGAACAATGCTTGTTGTTCCAGAGCTAGAGAGGGAGGTCGAACTCCTATGGGAATTGAGAGATACACGCAAGCAACTTCGAAAGTTGAGGAATGAACGCGATCTCATTGAGGACAAAATACATCATTTAAAGTGGTCTCTGAAATTTGAAGATACCAGTGCTGACGAGAAGCAAAAACTATCTTCTGAATACAATGCTTTGGAGTCTGAAAGAGATCGAGTTCGGATCACTCATCAAGATGCACAACGAGAATGTCACAAAATGTTTCACAAGATTTGGGGACAACTCATGAAGACTGGTTATCAGAACTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACTAGCCAAGTTTCCAACTTGAGCCTCTACTCCCCAGACAAATACTACAGACCCAGTGAAGACTACATGCCCCATGAATTCGATATTATTCCCTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

649

Amino Acids

73.97

Weight (kDa)

8.82

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1475
AccB1I GGYRCC 2 cut(s) 770, 914
AccBSI CCGCTC 1 cut(s) 264
AccI GTMKAC 1 cut(s) 876
AccII CGCG 1 cut(s) 1596
AccIII TCCGGA 1 cut(s) 585
AciI CCGC 3 cut(s) 153, 234, 262
AclWI GGATC 2 cut(s) 711, 1730
AcoI YGGCCR 1 cut(s) 1069
AcsI RAATTY 5 cut(s) 138, 903, 1126, 1640, 1925
AcuI CTGAAG 2 cut(s) 870, 1370
AcvI CACGTG 1 cut(s) 617
AfiI CCNNNNNNNGG 5 cut(s) 243, 437, 592, 642, 792
AgsI TTSAA 7 cut(s) 327, 487, 697, 742, 1187, 1416, 1646
AjnI CCWGG 1 cut(s) 268
AjuI GAANNNNNNNTTGG 2 cut(s) 750, 782
AluBI AGCT 6 cut(s) 321, 848, 854, 950, 1227, 1522
AluI AGCT 6 cut(s) 321, 848, 854, 950, 1227, 1522
Alw26I GTCTC 3 cut(s) 338, 567, 1638
AlwI GGATC 2 cut(s) 711, 1730
Aor13HI TCCGGA 1 cut(s) 585
AoxI GGCC 1 cut(s) 1069
ApeKI GCWGC 2 cut(s) 950, 1476
ApoI RAATTY 5 cut(s) 138, 903, 1126, 1640, 1925
AseI ATTAAT 1 cut(s) 1020
Asp700I GAANNNNTTC 2 cut(s) 903, 1330
AspLEI GCGC 1 cut(s) 1476
AspS9I GGNCC 1 cut(s) 633
AsuHPI GGTGA 5 cut(s) 171, 371, 1099, 1326, 1460
AsuII TTCGAA 1 cut(s) 1576
AvaII GGWCC 1 cut(s) 633
BaeI ACNNNNGTAYC 2 cut(s) 601, 634
BanI GGYRCC 2 cut(s) 770, 914
BbrPI CACGTG 1 cut(s) 617
BbsI GAAGAC 2 cut(s) 1796, 1914
BbvI GCAGC 2 cut(s) 937, 1488
BccI CCATC 6 cut(s) 50, 392, 569, 694, 968, 1148
BceAI ACGGC 1 cut(s) 1056
BciT130I CCWGG 1 cut(s) 270
BciVI GTATCC 1 cut(s) 602
BclI TGATCA 2 cut(s) 1267, 1450
BcoDI GTCTC 3 cut(s) 338, 567, 1638
BfaI CTAG 3 cut(s) 1338, 1523, 1851
BfmI CTRYAG 3 cut(s) 351, 951, 1894
BfuI GTATCC 1 cut(s) 602
BglII AGATCT 1 cut(s) 465
BisI GCNGC 2 cut(s) 951, 1477
BlsI GCNGC 2 cut(s) 952, 1478
Bme1390I CCNGG 1 cut(s) 270
Bme18I GGWCC 1 cut(s) 633
BmgT120I GGNCC 1 cut(s) 633
BmiI GGNNCC 3 cut(s) 391, 772, 916
BmrFI CCNGG 1 cut(s) 270
BmrI ACTGGG 1 cut(s) 1896
BmsI GCATC 3 cut(s) 63, 1272, 1726
BmuI ACTGGG 1 cut(s) 1896
BpiI GAAGAC 2 cut(s) 1796, 1914
Bpu10I CCTNAGC 1 cut(s) 1317
Bpu14I TTCGAA 1 cut(s) 1576
BpuEI CTTGAG 1 cut(s) 1888
BsaAI YACGTR 1 cut(s) 617
BsaI GGTCTC 1 cut(s) 1638
BsaJI CCNNGG 2 cut(s) 433, 733
BsaWI WCCGGW 1 cut(s) 585
BsaXI ACNNNNNCTCC 2 cut(s) 1374, 1404
Bsc4I CCNNNNNNNGG 5 cut(s) 243, 437, 592, 642, 792
Bse1I ACTGG 6 cut(s) 393, 1184, 1213, 1653, 1798, 1902
Bse3DI GCAATG 1 cut(s) 308
BseAI TCCGGA 1 cut(s) 585
BseBI CCWGG 1 cut(s) 270
BseDI CCNNGG 2 cut(s) 433, 733
BseGI GGATG 4 cut(s) 100, 446, 946, 1287
BseLI CCNNNNNNNGG 5 cut(s) 243, 437, 592, 642, 792
BseMI GCAATG 1 cut(s) 308
BseMII CTCAG 3 cut(s) 256, 1049, 1331
BseNI ACTGG 6 cut(s) 393, 1184, 1213, 1653, 1798, 1902
BseRI GAGGAG 1 cut(s) 87
BseXI GCAGC 2 cut(s) 937, 1488
Bsh1236I CGCG 1 cut(s) 1596
BshFI GGCC 1 cut(s) 1071
BshNI GGYRCC 2 cut(s) 770, 914
BsiSI CCGG 1 cut(s) 586
BslFI GGGAC 2 cut(s) 1118, 1791
BslI CCNNNNNNNGG 5 cut(s) 243, 437, 592, 642, 792
BsmAI GTCTC 3 cut(s) 338, 567, 1638
BsmFI GGGAC 2 cut(s) 1118, 1791
BsmI GAATGC 1 cut(s) 285
BsnI GGCC 1 cut(s) 1071
Bso31I GGTCTC 1 cut(s) 1638
Bsp119I TTCGAA 1 cut(s) 1576
Bsp13I TCCGGA 1 cut(s) 585
Bsp143I GATC 9 cut(s) 253, 465, 479, 703, 1267, 1450, 1597, 1711, 1722
Bsp19I CCATGG 1 cut(s) 733
BspACI CCGC 3 cut(s) 153, 234, 262
BspANI GGCC 1 cut(s) 1071
BspCNI CTCAG 3 cut(s) 255, 1050, 1330
BspEI TCCGGA 1 cut(s) 585
BspFNI CGCG 1 cut(s) 1596
BspHI TCATGA 2 cut(s) 1270, 1785
BspLI GGNNCC 3 cut(s) 391, 772, 916
BspMAI CTGCAG 1 cut(s) 955
BspPI GGATC 2 cut(s) 711, 1730
BspT104I TTCGAA 1 cut(s) 1576
BspT107I GGYRCC 2 cut(s) 770, 914
BspTNI GGTCTC 1 cut(s) 1638
BsrBI CCGCTC 1 cut(s) 264
BsrDI GCAATG 1 cut(s) 308
BsrI ACTGG 6 cut(s) 393, 1184, 1213, 1653, 1798, 1902
BssECI CCNNGG 2 cut(s) 433, 733
BssMI GATC 9 cut(s) 253, 465, 479, 703, 1267, 1450, 1597, 1711, 1722
BssT1I CCWWGG 2 cut(s) 433, 733
Bst2UI CCWGG 1 cut(s) 270
Bst4CI ACNGT 3 cut(s) 295, 971, 1097
Bst6I CTCTTC 2 cut(s) 373, 488
BstBAI YACGTR 1 cut(s) 617
BstBI TTCGAA 1 cut(s) 1576
BstC8I GCNNGC 4 cut(s) 315, 319, 1568, 1840
BstDEI CTNAG 4 cut(s) 242, 753, 1058, 1317
BstDSI CCRYGG 1 cut(s) 733
BstF5I GGATG 4 cut(s) 100, 446, 946, 1287
BstFNI CGCG 1 cut(s) 1596
BstHHI GCGC 1 cut(s) 1476
BstKTI GATC 9 cut(s) 256, 468, 482, 706, 1270, 1453, 1600, 1714, 1725
BstMAI GTCTC 3 cut(s) 338, 567, 1638
BstMBI GATC 9 cut(s) 253, 465, 479, 703, 1267, 1450, 1597, 1711, 1722
BstMWI GCNNNNNNNGC 1 cut(s) 1054
BstNI CCWGG 1 cut(s) 270
BstNSI RCATGY 2 cut(s) 317, 1918
BstSCI CCNGG 1 cut(s) 268
BstSFI CTRYAG 3 cut(s) 351, 951, 1894
BstUI CGCG 1 cut(s) 1596
BstV1I GCAGC 2 cut(s) 937, 1488
BstV2I GAAGAC 2 cut(s) 1796, 1914
BstX2I RGATCY 1 cut(s) 465
BstXI CCANNNNNNTGG 2 cut(s) 420, 974
BstYI RGATCY 1 cut(s) 465
BsuI GTATCC 1 cut(s) 602
BsuRI GGCC 1 cut(s) 1071
BtgI CCRYGG 1 cut(s) 733
BtgZI GCGATG 1 cut(s) 28
BtsCI GGATG 4 cut(s) 100, 446, 946, 1287
BtsI GCAGTG 3 cut(s) 23, 1219, 1393
BtsIMutI CAGTG 8 cut(s) 23, 400, 1206, 1219, 1346, 1393, 1660, 1909
Cac8I GCNNGC 4 cut(s) 315, 319, 1568, 1840
CciI TCATGA 2 cut(s) 1270, 1785
CfoI GCGC 1 cut(s) 1476
Cfr13I GGNCC 1 cut(s) 633
CspCI CAANNNNNGTGG 2 cut(s) 603, 638
DdeI CTNAG 4 cut(s) 242, 753, 1058, 1317
DpnI GATC 9 cut(s) 255, 467, 481, 705, 1269, 1452, 1599, 1713, 1724
DpnII GATC 9 cut(s) 253, 465, 479, 703, 1267, 1450, 1597, 1711, 1722
DraI TTTAAA 4 cut(s) 124, 883, 984, 1626
EaeI YGGCCR 1 cut(s) 1069
Eam1104I CTCTTC 2 cut(s) 373, 488
EarI CTCTTC 2 cut(s) 373, 488
EciI GGCGGA 1 cut(s) 223
Eco130I CCWWGG 2 cut(s) 433, 733
Eco31I GGTCTC 1 cut(s) 1638
Eco47I GGWCC 1 cut(s) 633
Eco57I CTGAAG 2 cut(s) 870, 1370
Eco72I CACGTG 1 cut(s) 617
EcoRI GAATTC 2 cut(s) 138, 1925
EcoRII CCWGG 1 cut(s) 268
EcoT14I CCWWGG 2 cut(s) 433, 733
ErhI CCWWGG 2 cut(s) 433, 733
FalI AAGNNNNNCTT 4 cut(s) 452, 484, 1211, 1243
FaqI GGGAC 2 cut(s) 1118, 1791
FauI CCCGC 2 cut(s) 160, 269
FauNDI CATATG 2 cut(s) 384, 571
FbaI TGATCA 2 cut(s) 1267, 1450
FblI GTMKAC 1 cut(s) 876
Fnu4HI GCNGC 2 cut(s) 951, 1477
FokI GGATG 4 cut(s) 87, 453, 953, 1294
Fsp4HI GCNGC 2 cut(s) 951, 1477
FspBI CTAG 3 cut(s) 1338, 1523, 1851
FspI TGCGCA 1 cut(s) 1475
GlaI GCGC 1 cut(s) 1475
GluI GCNGC 2 cut(s) 951, 1477
HaeIII GGCC 1 cut(s) 1071
HapII CCGG 1 cut(s) 586
HhaI GCGC 1 cut(s) 1476
Hin6I GCGC 1 cut(s) 1474
HinP1I GCGC 1 cut(s) 1474
HincII GTYRAC 1 cut(s) 407
HindII GTYRAC 1 cut(s) 407
HindIII AAGCTT 2 cut(s) 852, 1225
HinfI GANTC 9 cut(s) 74, 80, 560, 738, 797, 1064, 1274, 1421, 1700
HpaII CCGG 1 cut(s) 586
HphI GGTGA 5 cut(s) 171, 371, 1099, 1326, 1460
Hpy166II GTNNAC 3 cut(s) 407, 877, 1430
Hpy188I TCNGA 9 cut(s) 79, 253, 659, 909, 1638, 1684, 1705, 1722, 1803
Hpy8I GTNNAC 3 cut(s) 407, 877, 1430
HpyAV CCTTC 5 cut(s) 169, 210, 904, 1232, 1345
HpyCH4III ACNGT 3 cut(s) 295, 971, 1097
HpyCH4IV ACGT 2 cut(s) 373, 616
HpyCH4V TGCA 9 cut(s) 28, 313, 474, 506, 569, 953, 1170, 1217, 1739
HpyF10VI GCNNNNNNNGC 1 cut(s) 1054
HpyF3I CTNAG 4 cut(s) 242, 753, 1058, 1317
HpySE526I ACGT 2 cut(s) 373, 616
HspAI GCGC 1 cut(s) 1474
Kpn2I TCCGGA 1 cut(s) 585
Ksp22I TGATCA 2 cut(s) 1267, 1450
Kzo9I GATC 9 cut(s) 253, 465, 479, 703, 1267, 1450, 1597, 1711, 1722
LmnI GCTCC 2 cut(s) 16, 263
Lsp1109I GCAGC 2 cut(s) 937, 1488
LweI GCATC 3 cut(s) 63, 1272, 1726
MaeI CTAG 3 cut(s) 1338, 1523, 1851
MaeII ACGT 2 cut(s) 373, 616
MaeIII GTNAC 4 cut(s) 359, 1087, 1140, 1751
MalI GATC 9 cut(s) 255, 467, 481, 705, 1269, 1452, 1599, 1713, 1724
MbiI CCGCTC 1 cut(s) 264
MboI GATC 9 cut(s) 253, 465, 479, 703, 1267, 1450, 1597, 1711, 1722
MfeI CAATTG 2 cut(s) 869, 1416
MflI RGATCY 1 cut(s) 465
MlyI GAGTC 4 cut(s) 569, 1283, 1430, 1709
MmeI TCCRAC 3 cut(s) 38, 1303, 1887
MroI TCCGGA 1 cut(s) 585
MroXI GAANNNNTTC 2 cut(s) 903, 1330
MseI TTAA 8 cut(s) 123, 788, 882, 983, 1020, 1290, 1359, 1625
MslI CAYNNNNRTG 6 cut(s) 418, 714, 972, 1121, 1458, 1734
MspI CCGG 1 cut(s) 586
MspR9I CCNGG 1 cut(s) 270
MunI CAATTG 2 cut(s) 869, 1416
Mva1269I GAATGC 1 cut(s) 285
MvaI CCWGG 1 cut(s) 270
MvnI CGCG 1 cut(s) 1596
MwoI GCNNNNNNNGC 1 cut(s) 1054
NcoI CCATGG 1 cut(s) 733
NdeI CATATG 2 cut(s) 384, 571
NdeII GATC 9 cut(s) 253, 465, 479, 703, 1267, 1450, 1597, 1711, 1722
NlaIV GGNNCC 3 cut(s) 391, 772, 916
NmuCI GTSAC 4 cut(s) 359, 1087, 1140, 1751
NsbI TGCGCA 1 cut(s) 1475
NspI RCATGY 2 cut(s) 317, 1918
NspV TTCGAA 1 cut(s) 1576
PaeI GCATGC 1 cut(s) 317
PagI TCATGA 2 cut(s) 1270, 1785
PctI GAATGC 1 cut(s) 285
PdmI GAANNNNTTC 2 cut(s) 903, 1330
PfeI GAWTC 5 cut(s) 74, 80, 738, 797, 1064
PfoI TCCNGGA 1 cut(s) 268
PkrI GCNGC 2 cut(s) 952, 1478
PleI GAGTC 4 cut(s) 568, 1282, 1429, 1708
PmaCI CACGTG 1 cut(s) 617
PmlI CACGTG 1 cut(s) 617
PpsI GAGTC 4 cut(s) 568, 1282, 1429, 1708
Ppu21I YACGTR 1 cut(s) 617
PshBI ATTAAT 1 cut(s) 1020
Psp6I CCWGG 1 cut(s) 268
PspCI CACGTG 1 cut(s) 617
PspGI CCWGG 1 cut(s) 268
PspN4I GGNNCC 3 cut(s) 391, 772, 916
PspPI GGNCC 1 cut(s) 633
PstI CTGCAG 1 cut(s) 955
PsuI RGATCY 1 cut(s) 465
RseI CAYNNNNRTG 6 cut(s) 418, 714, 972, 1121, 1458, 1734
SaqAI TTAA 8 cut(s) 123, 788, 882, 983, 1020, 1290, 1359, 1625
SatI GCNGC 2 cut(s) 951, 1477
Sau3AI GATC 9 cut(s) 253, 465, 479, 703, 1267, 1450, 1597, 1711, 1722
Sau96I GGNCC 1 cut(s) 633
SchI GAGTC 4 cut(s) 569, 1283, 1430, 1709
ScrFI CCNGG 1 cut(s) 270
SfaNI GCATC 3 cut(s) 63, 1272, 1726
SfcI CTRYAG 3 cut(s) 351, 951, 1894
SfuI TTCGAA 1 cut(s) 1576
SinI GGWCC 1 cut(s) 633
SmiI ATTTAAAT 1 cut(s) 124
SmiMI CAYNNNNRTG 6 cut(s) 418, 714, 972, 1121, 1458, 1734
SmlI CTYRAG 1 cut(s) 1867
SmoI CTYRAG 1 cut(s) 1867
SphI GCATGC 1 cut(s) 317
SsiI CCGC 3 cut(s) 153, 234, 262
SspI AATATT 1 cut(s) 67
SspMI CTAG 3 cut(s) 1338, 1523, 1851
StyD4I CCNGG 1 cut(s) 268
StyI CCWWGG 2 cut(s) 433, 733
SwaI ATTTAAAT 1 cut(s) 124
TaaI ACNGT 3 cut(s) 295, 971, 1097
TaiI ACGT 2 cut(s) 376, 619
TaqI TCGA 5 cut(s) 946, 1536, 1576, 1714, 1929
TfiI GAWTC 5 cut(s) 74, 80, 738, 797, 1064
Tru1I TTAA 8 cut(s) 123, 788, 882, 983, 1020, 1290, 1359, 1625
Tru9I TTAA 8 cut(s) 123, 788, 882, 983, 1020, 1290, 1359, 1625
TscAI CASTG 8 cut(s) 30, 400, 1213, 1219, 1353, 1393, 1660, 1909
TseFI GTSAC 4 cut(s) 359, 1087, 1140, 1751
TseI GCWGC 2 cut(s) 950, 1476
Tsp45I GTSAC 4 cut(s) 359, 1087, 1140, 1751
TspDTI ATGAA 9 cut(s) 278, 506, 1038, 1139, 1251, 1391, 1605, 1802, 1938
TspRI CASTG 8 cut(s) 30, 400, 1213, 1219, 1353, 1393, 1660, 1909
VpaK11BI GGWCC 1 cut(s) 633
VspI ATTAAT 1 cut(s) 1020
XapI RAATTY 5 cut(s) 138, 903, 1126, 1640, 1925
XceI RCATGY 2 cut(s) 317, 1918
XcmI CCANNNNNNNNNTGG 1 cut(s) 325
XmiI GTMKAC 1 cut(s) 876
XmnI GAANNNNTTC 2 cut(s) 903, 1330
XspI CTAG 3 cut(s) 1338, 1523, 1851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.