Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015227

Physical Location & Seq

Genomic Coordinates Forward (+)

35196836 .. 35199864

Gene Structure 3029 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G397500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGAGGGCACTGCACTCGCTCCTTGGCAGCACAGTGAATGCTTTGTGCAAGGTTTCGATAACCCATTGTAGAGAAATCAAATTAGGGGTCCTCGCAGACGTTTACTACGGCAACAATATCCTAAATGGATATGCAAGATGTCATGATTTTTTTCTTGCTCACAAAATGTTCGACGACATGCCCCAAAGAGACACTGTGTCTTGGAATACGATGATTGCTGGGCATGTGAACTATGGGAACTTTGAGACTGCGTGGGAGATACTAAGAGAGATGAAAGGATGCGGATTCGATTTTGATGGGTATACATTTGGAAGCATACTTAAGGGGGTCGCTTGTGCTTATCGATGTGATCTTGGGGAACAAGTGCATTCCATGGTTGTTAAGACTGGTTACGTGGGTAATGTTTATTCGGGAAGTGCTCTTTTGGACATGTATGCAAAGTGTGGGAGAGTTGAGGAAGCGTATGTGGTCTTCGATTCCTTGCCAGAACGTAATTCTGTGTCATGGAATGCATTAATTGCTGGTTTTGTGCAAGTAGGTGATCGTAAAACTGCATTTTGGTTGATGAATTGTATGGAGCAGGAGGGGGTGAAGCTTGATGATGGCGCAATTGCTCCAATATTGACATTACTTGATGATGCTGAGTTTTACAAGTCCACAATGCAAATCCATTGTAAAATTCTGAAACATGGGCTGGATTGTAAAAGTACTGTGTGCAATGCCACAATCACTTCATACTCAGAGTGTGGGTCGATAGAAGATGCCGAAACAGTGTTTGATGGTGCTTTTGGTAGCAGAGATTTGGTAACATGGAATTCCATGCTAGCAGCATACTTGATTCATAAGAAAGAACTACTCGCTTGCAAACTCTTCATAGACATGCAAATGCTTGGGTTTGAACCAGATATCTACAGTTATACGAGCATCATCAGTGCCTATTCTGAAGATGTACATAAAAACCATGGAAAATCCTATCATGGATTGGTAATAAAAAGGGGACTAGAAAAGTCAGAGCCAATCTCTAATGCTTTGATAGCCAGGTATCTCAAGTCAAATAGCAATTCCATGGAAGAAGCATTACAGATATTTAAATCTATGGAGTCTAAGGATCGTGTTTCTTGGAACTCCATTTTGACTGGATTATCACAAATGGGGTTGAATGAATATGCCTTGAAATTCTTTGGACATATGAGATACGCGGAGGTAGATATTGATCATTATGCCTTCTCAGCTGTCCTCAGGTCTTGTTCAGATTTAGCAACCCTCCAACTGGGTCAAGAGATACATGCCTTGGCACATAAGTCAGGGCTTGAGTCCAATGAATTTGTTGCTAGTTCTTTGATCTTTATGTATACTAAGTGTGGGATCATTGAGGATGCTAGAAAATCCTTTGAACAGACCCCCAAAGACAGCTCAATCACTTGGAATTCGATTATTTTTGGATATGCACAGCATGGACAGGGATATGTTGCACTTGACCTCTTCTTCCAAATGAAGAAGGAAAAAGTGAAACTTGATCATATAACCTTTGTTGCAGTTCTAACAGCTTGTAGCCACATGGGTTTGGTTGAACAAGGCTGCAAGTTTCTAATGTCCATGGAATCGGATTATGGAATAACCCCACGAATGGAGCATTATGCTTGTGCAGTGGATCTATATGGGCGCGCTGGGCGTCTAGATGAGGCGAAAGCTTTGATTGAAGCAATGCCTTTTAAACCCGATGCAATGGTTTTGAGGACTTTATTGGGTGCCTGTAGGGCTTGTGGGAATATTGAATTAGCTAGTCAAATAGCAGGCTATCTGCTAGAGCTAGAGCCTGAAGAGCACTGCACTTATGTTCTTCTTTCCGACATGTATGGACATCTCAAAAGGTGGGATGAAAAAGCTAGTGTAAAGAGGCTTATGAGGGAAAGGGGTGTGAGAAAAGTCCCCGGTTGGAGTTGGATAGAAATTAAGAATGAGGTTTTTTCTTTCAAAGCTGAAGATCGTTCCCACTCCCATTGTGAAGAGATATATTGTGTATTGGGAGTTTTAATGGAGGAAATCAAGAGGATGGATTTTGATGCTAATGTAAAGGCTTTGTTGCATGATTTGGATCCTATGGACTGGTACTGTGATAATGCTCTTCTCCAAAACTGTGATTCAGTGTTGTCGGCTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

721

Amino Acids

81.02

Weight (kDa)

5.6

Isoelectric Point (pI)

42.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25970
fragaria_vesca	FvH4_3g28520
malus_domestica	MD15G1043900.v1.1
prunus_persica	Prupe.1G397500_v2.0.a1
pyrus_communis	pycom15g04090
rosa_chinensis	RchiOBHm_Chr4g0402431
rosa_laevigata	RLG00000009084
rosa_multiflora	Rmu_co8477433.1_g000001 Rmu_ssc0000330.1_g000025
rosa_roxburghii	Rroxscaffold_5G00347130
rosa_rugosa	Rorug04G0035300
rosa_samantha	Rh4AG112700 Rh4BG105200 Rh4CG119500 Rh4DG104500
rosa_wichuraiana	Rw4G009030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1748
AccI	GTMKAC	2 cut(s)	302, 1352
AccII	CGCG	2 cut(s)	1199, 1665
AciI	CCGC	2 cut(s)	282, 1199
AclWI	GGATC	5 cut(s)	1116, 1373, 1659, 2090, 2103
AcsI	RAATTY	5 cut(s)	678, 814, 1175, 1322, 1426
AcuI	CTGAAG	3 cut(s)	963, 1839, 2001
AcyI	GRCGYC	1 cut(s)	1672
AfaI	GTAC	3 cut(s)	709, 951, 2111
AfiI	CCNNNNNNNGG	2 cut(s)	1270, 1627
AflII	CTTAAG	1 cut(s)	320
AflIII	ACRYGT	2 cut(s)	429, 1851
AgsI	TTSAA	8 cut(s)	899, 1159, 1174, 1394, 1571, 1700, 1775, 1975
AhdI	GACNNNNNGTC	1 cut(s)	196
AjnI	CCWGG	1 cut(s)	1037
AluBI	AGCT	9 cut(s)	595, 1232, 1413, 1547, 1691, 1781, 1810, 1886, 1979
AluI	AGCT	9 cut(s)	595, 1232, 1413, 1547, 1691, 1781, 1810, 1886, 1979
Alw21I	GWGCWC	2 cut(s)	421, 1827
Alw26I	GTCTC	2 cut(s)	183, 239
AlwI	GGATC	5 cut(s)	1116, 1373, 1659, 2090, 2103
ApeKI	GCWGC	4 cut(s)	27, 827, 1578, 2156
ApoI	RAATTY	5 cut(s)	678, 814, 1175, 1322, 1426
ArsI	GACNNNNNNTTYG	2 cut(s)	72, 104
AseI	ATTAAT	1 cut(s)	515
AspLEI	GCGC	3 cut(s)	608, 1665, 1667
AspS9I	GGNCC	1 cut(s)	88
AsuC2I	CCSGG	1 cut(s)	1932
AsuHPI	GGTGA	2 cut(s)	551, 601
AsuNHI	GCTAGC	1 cut(s)	823
AvaII	GGWCC	1 cut(s)	88
AxyI	CCTNAGG	1 cut(s)	1238
BaeGI	GKGCMC	1 cut(s)	10
BamHI	GGATCC	1 cut(s)	2095
BanI	GGYRCC	1 cut(s)	1748
BarI	GAAGNNNNNNTAC	4 cut(s)	455, 487, 1062, 1094
BbsI	GAAGAC	1 cut(s)	463
Bbv12I	GWGCWC	2 cut(s)	421, 1827
BbvI	GCAGC	4 cut(s)	39, 839, 1565, 2143
BccI	CCATC	4 cut(s)	290, 596, 773, 2047
BceAI	ACGGC	1 cut(s)	124
BcgI	CGANNNNNNTGC	1 cut(s)	31
BciT130I	CCWGG	1 cut(s)	1039
BclI	TGATCA	2 cut(s)	1213, 1516
BcnI	CCSGG	1 cut(s)	1932
BcoDI	GTCTC	2 cut(s)	183, 239
BfaI	CTAG	9 cut(s)	824, 1001, 1332, 1380, 1676, 1782, 1805, 1811, 1887
BfmI	CTRYAG	2 cut(s)	910, 1753
BfrI	CTTAAG	1 cut(s)	320
BglI	GCCNNNNNGGC	1 cut(s)	1757
BisI	GCNGC	4 cut(s)	28, 828, 1579, 2157
BlsI	GCNGC	4 cut(s)	29, 829, 1580, 2158
BmcAI	AGTACT	1 cut(s)	709
Bme1390I	CCNGG	2 cut(s)	1039, 1932
Bme18I	GGWCC	1 cut(s)	88
BmeRI	GACNNNNNGTC	1 cut(s)	196
BmgT120I	GGNCC	1 cut(s)	88
BmiI	GGNNCC	3 cut(s)	89, 1750, 2097
BmrFI	CCNGG	2 cut(s)	1039, 1932
BmrI	ACTGGG	1 cut(s)	1280
BmsI	GCATC	7 cut(s)	269, 628, 751, 933, 1366, 1711, 2053
BmtI	GCTAGC	1 cut(s)	827
BmuI	ACTGGG	1 cut(s)	1280
BpiI	GAAGAC	1 cut(s)	463
BplI	GAGNNNNNCTC	2 cut(s)	1004, 1036
BpuEI	CTTGAG	2 cut(s)	1031, 1331
BpuMI	CCSGG	1 cut(s)	1932
Bsa29I	ATCGAT	1 cut(s)	343
BsaAI	YACGTR	1 cut(s)	394
BsaBI	GATNNNNATC	2 cut(s)	1212, 2094
BsaHI	GRCGYC	1 cut(s)	1672
BsaJI	CCNNGG	7 cut(s)	22, 372, 961, 1065, 1290, 1596, 1930
Bsc4I	CCNNNNNNNGG	2 cut(s)	1270, 1627
Bse1I	ACTGG	4 cut(s)	391, 1141, 1275, 2111
Bse21I	CCTNAGG	1 cut(s)	1238
Bse3DI	GCAATG	3 cut(s)	724, 1710, 1731
Bse8I	GATNNNNATC	2 cut(s)	1212, 2094
BseBI	CCWGG	1 cut(s)	1039
BseCI	ATCGAT	1 cut(s)	343
BseDI	CCNNGG	7 cut(s)	22, 372, 961, 1065, 1290, 1596, 1930
BseGI	GGATG	4 cut(s)	284, 1381, 1882, 2058
BseJI	GATNNNNATC	2 cut(s)	1212, 2094
BseLI	CCNNNNNNNGG	2 cut(s)	1270, 1627
BseMI	GCAATG	3 cut(s)	724, 1710, 1731
BseMII	CTCAG	4 cut(s)	633, 753, 1242, 1252
BseNI	ACTGG	4 cut(s)	391, 1141, 1275, 2111
BsePI	GCGCGC	1 cut(s)	1663
BseSI	GKGCMC	1 cut(s)	10
BseXI	GCAGC	4 cut(s)	39, 839, 1565, 2143
BseYI	CCCAGC	2 cut(s)	218, 1667
BsgI	GTGCAG	2 cut(s)	1665, 1813
Bsh1236I	CGCG	2 cut(s)	1199, 1665
BshNI	GGYRCC	1 cut(s)	1748
BshVI	ATCGAT	1 cut(s)	343
BsiHKAI	GWGCWC	2 cut(s)	421, 1827
BsiSI	CCGG	1 cut(s)	1932
BslFI	GGGAC	2 cut(s)	1011, 1913
BslI	CCNNNNNNNGG	2 cut(s)	1270, 1627
BsmAI	GTCTC	2 cut(s)	183, 239
BsmFI	GGGAC	2 cut(s)	1011, 1913
BsmI	GAATGC	3 cut(s)	43, 367, 514
Bsp1286I	GDGCHC	3 cut(s)	10, 421, 1827
Bsp1407I	TGTACA	1 cut(s)	949
Bsp19I	CCATGG	4 cut(s)	372, 961, 1065, 1596
BspACI	CCGC	2 cut(s)	282, 1199
BspCNI	CTCAG	4 cut(s)	634, 752, 1241, 1251
BspDI	ATCGAT	1 cut(s)	343
BspFNI	CGCG	2 cut(s)	1199, 1665
BspHI	TCATGA	1 cut(s)	142
BspLI	GGNNCC	3 cut(s)	89, 1750, 2097
BspOI	GCTAGC	1 cut(s)	827
BspPI	GGATC	5 cut(s)	1116, 1373, 1659, 2090, 2103
BspQI	GCTCTTC	2 cut(s)	1815, 2130
BspT107I	GGYRCC	1 cut(s)	1748
BspTI	CTTAAG	1 cut(s)	320
BsrDI	GCAATG	3 cut(s)	724, 1710, 1731
BsrGI	TGTACA	1 cut(s)	949
BsrI	ACTGG	4 cut(s)	391, 1141, 1275, 2111
BssECI	CCNNGG	7 cut(s)	22, 372, 961, 1065, 1290, 1596, 1930
BssHII	GCGCGC	1 cut(s)	1663
BssNAI	GTATAC	2 cut(s)	303, 1353
BssNI	GRCGYC	1 cut(s)	1672
BssT1I	CCWWGG	6 cut(s)	22, 372, 961, 1065, 1290, 1596
Bst1107I	GTATAC	2 cut(s)	303, 1353
Bst2UI	CCWGG	1 cut(s)	1039
Bst4CI	ACNGT	7 cut(s)	34, 196, 712, 772, 914, 2114, 2138
Bst6I	CTCTTC	5 cut(s)	875, 1487, 1815, 2001, 2130
BstACI	GRCGYC	1 cut(s)	1672
BstAFI	CTTAAG	1 cut(s)	320
BstAPI	GCANNNNNTGC	1 cut(s)	518
BstAUI	TGTACA	1 cut(s)	949
BstBAI	YACGTR	1 cut(s)	394
BstC8I	GCNNGC	4 cut(s)	825, 862, 1665, 1795
BstDEI	CTNAG	7 cut(s)	263, 642, 739, 1104, 1228, 1238, 1356
BstDSI	CCRYGG	4 cut(s)	372, 961, 1065, 1596
BstF5I	GGATG	4 cut(s)	284, 1381, 1882, 2058
BstFNI	CGCG	2 cut(s)	1199, 1665
BstHHI	GCGC	3 cut(s)	608, 1665, 1667
BstMAI	GTCTC	2 cut(s)	183, 239
BstMWI	GCNNNNNNNGC	6 cut(s)	518, 1034, 1229, 1669, 1757, 1822
BstNI	CCWGG	1 cut(s)	1039
BstNSI	RCATGY	6 cut(s)	181, 227, 433, 883, 1289, 1855
BstSCI	CCNGG	2 cut(s)	1037, 1930
BstSFI	CTRYAG	2 cut(s)	910, 1753
BstSLI	GKGCMC	1 cut(s)	10
BstUI	CGCG	2 cut(s)	1199, 1665
BstV1I	GCAGC	4 cut(s)	39, 839, 1565, 2143
BstV2I	GAAGAC	1 cut(s)	463
BstX2I	RGATCY	2 cut(s)	1651, 2095
BstYI	RGATCY	2 cut(s)	1651, 2095
BstZ17I	GTATAC	2 cut(s)	303, 1353
Bsu15I	ATCGAT	1 cut(s)	343
Bsu36I	CCTNAGG	1 cut(s)	1238
BsuTUI	ATCGAT	1 cut(s)	343
BtgI	CCRYGG	4 cut(s)	372, 961, 1065, 1596
BtsCI	GGATG	4 cut(s)	284, 1381, 1882, 2058
BtsI	GCAGTG	3 cut(s)	8, 1653, 1825
BtsIMutI	CAGTG	8 cut(s)	8, 39, 192, 777, 937, 1653, 1825, 2151
Cac8I	GCNNGC	4 cut(s)	825, 862, 1665, 1795
CciI	TCATGA	1 cut(s)	142
CfoI	GCGC	3 cut(s)	608, 1665, 1667
Cfr13I	GGNCC	1 cut(s)	88
ClaI	ATCGAT	1 cut(s)	343
CseI	GACGC	1 cut(s)	1661
Csp6I	GTAC	3 cut(s)	708, 950, 2110
CspCI	CAANNNNNGTGG	2 cut(s)	1982, 2017
CviQI	GTAC	3 cut(s)	708, 950, 2110
DdeI	CTNAG	7 cut(s)	263, 642, 739, 1104, 1228, 1238, 1356
DraI	TTTAAA	2 cut(s)	1090, 1714
DriI	GACNNNNNGTC	1 cut(s)	196
Eam1104I	CTCTTC	5 cut(s)	875, 1487, 1815, 2001, 2130
Eam1105I	GACNNNNNGTC	1 cut(s)	196
EarI	CTCTTC	5 cut(s)	875, 1487, 1815, 2001, 2130
Eco130I	CCWWGG	6 cut(s)	22, 372, 961, 1065, 1290, 1596
Eco32I	GATATC	1 cut(s)	907
Eco47I	GGWCC	1 cut(s)	88
Eco57I	CTGAAG	3 cut(s)	963, 1839, 2001
Eco81I	CCTNAGG	1 cut(s)	1238
EcoO109I	RGGNCCY	1 cut(s)	88
EcoRI	GAATTC	2 cut(s)	814, 1426
EcoRII	CCWGG	1 cut(s)	1037
EcoRV	GATATC	1 cut(s)	907
EcoT14I	CCWWGG	6 cut(s)	22, 372, 961, 1065, 1290, 1596
EcoT22I	ATGCAT	1 cut(s)	514
ErhI	CCWWGG	6 cut(s)	22, 372, 961, 1065, 1290, 1596
FalI	AAGNNNNNCTT	2 cut(s)	1497, 1529
FaqI	GGGAC	2 cut(s)	1011, 1913
FauNDI	CATATG	1 cut(s)	1188
FbaI	TGATCA	2 cut(s)	1213, 1516
FblI	GTMKAC	2 cut(s)	302, 1352
Fnu4HI	GCNGC	4 cut(s)	28, 828, 1579, 2157
FokI	GGATG	4 cut(s)	291, 1388, 1889, 2065
Fsp4HI	GCNGC	4 cut(s)	28, 828, 1579, 2157
FspBI	CTAG	9 cut(s)	824, 1001, 1332, 1380, 1676, 1782, 1805, 1811, 1887
GlaI	GCGC	3 cut(s)	607, 1664, 1666
GluI	GCNGC	4 cut(s)	28, 828, 1579, 2157
GsaI	CCCAGC	2 cut(s)	222, 1671
HapII	CCGG	1 cut(s)	1932
HgaI	GACGC	1 cut(s)	1661
HhaI	GCGC	3 cut(s)	608, 1665, 1667
Hin1I	GRCGYC	1 cut(s)	1672
Hin6I	GCGC	3 cut(s)	606, 1663, 1665
HinP1I	GCGC	3 cut(s)	606, 1663, 1665
HindIII	AAGCTT	2 cut(s)	593, 1689
HinfI	GANTC	7 cut(s)	285, 476, 838, 1100, 1313, 1601, 2141
HpaII	CCGG	1 cut(s)	1932
HphI	GGTGA	2 cut(s)	551, 601
Hpy166II	GTNNAC	5 cut(s)	103, 229, 303, 657, 1353
Hpy188I	TCNGA	7 cut(s)	684, 742, 943, 1012, 1252, 1606, 1849
Hpy188III	TCNNGA	5 cut(s)	143, 411, 1277, 1676, 2047
Hpy8I	GTNNAC	5 cut(s)	103, 229, 303, 657, 1353
Hpy99I	CGWCG	1 cut(s)	176
HpyAV	CCTTC	2 cut(s)	1234, 1492
HpyCH4III	ACNGT	7 cut(s)	34, 196, 712, 772, 914, 2114, 2138
HpyCH4IV	ACGT	3 cut(s)	99, 393, 490
HpyF10VI	GCNNNNNNNGC	6 cut(s)	518, 1034, 1229, 1669, 1757, 1822
HpyF3I	CTNAG	7 cut(s)	263, 642, 739, 1104, 1228, 1238, 1356
HpySE526I	ACGT	3 cut(s)	99, 393, 490
Hsp92I	GRCGYC	1 cut(s)	1672
HspAI	GCGC	3 cut(s)	606, 1663, 1665
Ksp22I	TGATCA	2 cut(s)	1213, 1516
LguI	GCTCTTC	2 cut(s)	1815, 2130
LmnI	GCTCC	4 cut(s)	24, 577, 619, 1630
Lsp1109I	GCAGC	4 cut(s)	39, 839, 1565, 2143
LweI	GCATC	7 cut(s)	269, 628, 751, 933, 1366, 1711, 2053
MaeI	CTAG	9 cut(s)	824, 1001, 1332, 1380, 1676, 1782, 1805, 1811, 1887
MaeII	ACGT	3 cut(s)	99, 393, 490
MaeIII	GTNAC	2 cut(s)	389, 805
MfeI	CAATTG	1 cut(s)	609
MflI	RGATCY	2 cut(s)	1651, 2095
MhlI	GDGCHC	3 cut(s)	10, 421, 1827
MlyI	GAGTC	2 cut(s)	1109, 1322
MmeI	TCCRAC	4 cut(s)	1291, 1872, 1916, 1922
Mph1103I	ATGCAT	1 cut(s)	514
MseI	TTAA	7 cut(s)	321, 381, 515, 1089, 1713, 1953, 2033
MslI	CAYNNNNRTG	2 cut(s)	878, 884
MspA1I	CMGCKG	1 cut(s)	1232
MspCI	CTTAAG	1 cut(s)	320
MspI	CCGG	1 cut(s)	1932
MspR9I	CCNGG	2 cut(s)	1039, 1932
MunI	CAATTG	1 cut(s)	609
Mva1269I	GAATGC	3 cut(s)	43, 367, 514
MvaI	CCWGG	1 cut(s)	1039
MvnI	CGCG	2 cut(s)	1199, 1665
MwoI	GCNNNNNNNGC	6 cut(s)	518, 1034, 1229, 1669, 1757, 1822
NciI	CCSGG	1 cut(s)	1932
NcoI	CCATGG	4 cut(s)	372, 961, 1065, 1596
NdeI	CATATG	1 cut(s)	1188
NheI	GCTAGC	1 cut(s)	823
NlaIV	GGNNCC	3 cut(s)	89, 1750, 2097
NsiI	ATGCAT	1 cut(s)	514
NspI	RCATGY	6 cut(s)	181, 227, 433, 883, 1289, 1855
PagI	TCATGA	1 cut(s)	142
PauI	GCGCGC	1 cut(s)	1663
PciI	ACATGT	2 cut(s)	429, 1851
PciSI	GCTCTTC	2 cut(s)	1815, 2130
PctI	GAATGC	3 cut(s)	43, 367, 514
PfeI	GAWTC	5 cut(s)	285, 476, 838, 1601, 2141
PkrI	GCNGC	4 cut(s)	29, 829, 1580, 2158
PleI	GAGTC	2 cut(s)	1108, 1321
PpsI	GAGTC	2 cut(s)	1108, 1321
Ppu21I	YACGTR	1 cut(s)	394
PpuMI	RGGWCCY	1 cut(s)	88
PscI	ACATGT	2 cut(s)	429, 1851
PshBI	ATTAAT	1 cut(s)	515
Psp5II	RGGWCCY	1 cut(s)	88
Psp6I	CCWGG	1 cut(s)	1037
PspFI	CCCAGC	2 cut(s)	218, 1667
PspGI	CCWGG	1 cut(s)	1037
PspN4I	GGNNCC	3 cut(s)	89, 1750, 2097
PspPI	GGNCC	1 cut(s)	88
PspPPI	RGGWCCY	1 cut(s)	88
PsuI	RGATCY	2 cut(s)	1651, 2095
PteI	GCGCGC	1 cut(s)	1663
PvuII	CAGCTG	1 cut(s)	1232
RsaI	GTAC	3 cut(s)	709, 951, 2111
RsaNI	GTAC	3 cut(s)	708, 950, 2110
RseI	CAYNNNNRTG	2 cut(s)	878, 884
SapI	GCTCTTC	2 cut(s)	1815, 2130
SaqAI	TTAA	7 cut(s)	321, 381, 515, 1089, 1713, 1953, 2033
SatI	GCNGC	4 cut(s)	28, 828, 1579, 2157
Sau96I	GGNCC	1 cut(s)	88
ScaI	AGTACT	1 cut(s)	709
SchI	GAGTC	2 cut(s)	1109, 1322
ScrFI	CCNGG	2 cut(s)	1039, 1932
SduI	GDGCHC	3 cut(s)	10, 421, 1827
SfaNI	GCATC	7 cut(s)	269, 628, 751, 933, 1366, 1711, 2053
SfcI	CTRYAG	2 cut(s)	910, 1753
SinI	GGWCC	1 cut(s)	88
SmiI	ATTTAAAT	1 cut(s)	1090
SmiMI	CAYNNNNRTG	2 cut(s)	878, 884
SmlI	CTYRAG	3 cut(s)	320, 1046, 1310
SmoI	CTYRAG	3 cut(s)	320, 1046, 1310
SsiI	CCGC	2 cut(s)	282, 1199
SspI	AATATT	2 cut(s)	621, 1771
SspMI	CTAG	9 cut(s)	824, 1001, 1332, 1380, 1676, 1782, 1805, 1811, 1887
StyD4I	CCNGG	2 cut(s)	1037, 1930
StyI	CCWWGG	6 cut(s)	22, 372, 961, 1065, 1290, 1596
SwaI	ATTTAAAT	1 cut(s)	1090
TaaI	ACNGT	7 cut(s)	34, 196, 712, 772, 914, 2114, 2138
TaiI	ACGT	3 cut(s)	102, 396, 493
TaqI	TCGA	7 cut(s)	56, 171, 288, 343, 474, 752, 1430
TatI	WGTACW	2 cut(s)	707, 949
TfiI	GAWTC	5 cut(s)	285, 476, 838, 1601, 2141
Tru1I	TTAA	7 cut(s)	321, 381, 515, 1089, 1713, 1953, 2033
Tru9I	TTAA	7 cut(s)	321, 381, 515, 1089, 1713, 1953, 2033
TscAI	CASTG	8 cut(s)	15, 39, 199, 777, 937, 1653, 1832, 2151
TseI	GCWGC	4 cut(s)	27, 827, 1578, 2156
TspDTI	ATGAA	9 cut(s)	287, 581, 723, 830, 862, 1176, 1335, 1508, 1893
TspRI	CASTG	8 cut(s)	15, 39, 199, 777, 937, 1653, 1832, 2151
Vha464I	CTTAAG	1 cut(s)	320
VpaK11BI	GGWCC	1 cut(s)	88
VspI	ATTAAT	1 cut(s)	515
XapI	RAATTY	5 cut(s)	678, 814, 1175, 1322, 1426
XbaI	TCTAGA	1 cut(s)	1675
XceI	RCATGY	6 cut(s)	181, 227, 433, 883, 1289, 1855
XmiI	GTMKAC	2 cut(s)	302, 1352
XspI	CTAG	9 cut(s)	824, 1001, 1332, 1380, 1676, 1782, 1805, 1811, 1887
ZrmI	AGTACT	1 cut(s)	709
Zsp2I	ATGCAT	1 cut(s)	514

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.