Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013469

Physical Location & Seq

Genomic Coordinates Reverse (-)

37080107 .. 37081927

Gene Structure 1821 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G433500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1170 bp

ATGGCTCTGATGATGGACAATTGTGAGGGCATATTGCTCTCCCTCGACTCGCACAAGTCGGTGCCGGCTCCCTTCCTGACCAAAACGTACCAGCTCGTGGATGATCCGGCCACCGACCACATCGTCTCGTGGGGCGAAGACGACGCCACCTTCGTCGTTTGGCGCCCTCCCGAGTTCGCCCGCGACCTCCTCCCCAACTACTTCAAGCACAACAACTTCTCCAGCTTCGTCCGCCAGCTCAACACCTACGGTTTTAGGAAGATTGTACCGGACAGATGGGAGTTTGCCAATGAGTTCTTCAAGAAAGGAGAGAAGCATTTGCTCTGTGAGATCCATAGAAGAAAGACAGCTCAGCCTCATCAGGTGGGTTTCAGCCACCACCACCACCACCACCACAACTCGCATTCGCCACTCGGCATCAACGGCCACCATCATCCGAGCTTCTTCCCCTTCCCTAGTCGTGGCAGCATCTCCCCCTCCGACTCGGACGAGCCGCCCAACTGGTGTGACTCGGACTCACCACCTCTCCCATCACCAACCGGAGGTATTAACAATCACAACAACAACAATAATAATTTTATGAGTATTAATAATGCGTCGGTGACGGGCTTGGCGGAGGACAATGAGAGGCTGCGGCGGAGCAACTCCATGCTGATGTCAGAGCTAGCCCACATGAGAAAACTCTACAACGACATCATCTACTTTGTTCAGAATCATGTCAAGCCTGTGGCTCCAAGCAATTCCTACCCTTCTTCTTTGCTTCTCTGTAACCCTCCTCCGAATTCCATGGCTCCTGCTGCTACTGCTACTAAGCCTAGTAATAATTTCAACCAGCTTCTTGGGTACTATCCAGCTCCTGCTACAAATGCTAAGCAAACCCCTCACATGTCTACGACGACCCACCATCATGTTATGAACTCTTCCAGCCCGAGCAACACCACGTCCAAGAGCAGCTCAGTGACGATTCTGGAAGACCAGCAACAACCCAGTAGCAATGGGTGCAAAAATACCAAGCTGTTTGGGGTGCCGCTGCTTCACTCGAAGAAGCGGTTGCACCCGGAGGAGTATGGCTCGAACCATGGGACCAGCATGATGGAGGCCAGCAAGGCTCGTCTGATTTTGGAAAAAGATGACTTAGGTCTCCATCTCATGCCTCCCTCCGCATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0008356 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

390

Amino Acids

43.56

Weight (kDa)

7.17

Isoelectric Point (pI)

56.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013469)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G46264
fragaria_vesca	FvH4_2g34260
malus_domestica	MD08G1098200.v1.1 MD15G1080700.v1.1
prunus_persica	Prupe.1G433500_v2.0.a1
pyrus_communis	pycom08g08000 pycom15g07520
rosa_chinensis	RchiOBHm_Chr6g0308161
rosa_laevigata	RLG00000010664
rosa_multiflora	Rmu_sc0005706.1_g000009
rosa_roxburghii	Rroxscaffold_7G00160400 Rroxscaffold_7G00160490
rosa_rugosa	Rorug06G0364300
rosa_samantha	Rh6AG473500 Rh6BG484300 Rh6CG489300 Rh6DG475500
rosa_wichuraiana	Rw6G041280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	122
AccB1I	GGYRCC	3 cut(s)	61, 162, 1024
AccB7I	CCANNNNNTGG	1 cut(s)	97
AccI	GTMKAC	1 cut(s)	890
AccII	CGCG	1 cut(s)	183
AciI	CCGC	9 cut(s)	181, 232, 494, 614, 634, 637, 1028, 1048, 1161
AclWI	GGATC	2 cut(s)	98, 325
AcoI	YGGCCR	2 cut(s)	108, 424
AcsI	RAATTY	1 cut(s)	781
AcyI	GRCGYC	2 cut(s)	144, 163
AfaI	GTAC	3 cut(s)	89, 267, 845
AfiI	CCNNNNNNNGG	3 cut(s)	97, 461, 542
AflIII	ACRYGT	1 cut(s)	885
AgsI	TTSAA	3 cut(s)	205, 301, 829
AjiI	CACGTC	1 cut(s)	942
AjuI	GAANNNNNNNTTGG	2 cut(s)	281, 313
Alw26I	GTCTC	2 cut(s)	130, 1145
AlwI	GGATC	2 cut(s)	98, 325
AlwNI	CAGNNNCTG	1 cut(s)	857
Ama87I	CYCGRG	2 cut(s)	170, 928
AoxI	GGCC	3 cut(s)	108, 424, 1098
ApeKI	GCWGC	5 cut(s)	465, 631, 797, 951, 1030
ApoI	RAATTY	1 cut(s)	781
ArsI	GACNNNNNNTTYG	2 cut(s)	134, 166
AseI	ATTAAT	1 cut(s)	588
AspLEI	GCGC	1 cut(s)	165
AspS9I	GGNCC	1 cut(s)	1083
AsuC2I	CCSGG	1 cut(s)	1058
AsuHPI	GGTGA	3 cut(s)	510, 525, 613
AsuNHI	GCTAGC	1 cut(s)	664
AvaI	CYCGRG	2 cut(s)	170, 928
AvaII	GGWCC	1 cut(s)	1083
BanI	GGYRCC	3 cut(s)	61, 162, 1024
BauI	CACGAG	2 cut(s)	95, 127
BbsI	GAAGAC	2 cut(s)	144, 978
BbvI	GCAGC	5 cut(s)	477, 618, 784, 963, 1017
BccI	CCATC	7 cut(s)	7, 270, 438, 538, 912, 1087, 1152
BceAI	ACGGC	1 cut(s)	439
BcnI	CCSGG	1 cut(s)	1058
BcoDI	GTCTC	2 cut(s)	130, 1145
BfaI	CTAG	3 cut(s)	456, 665, 816
BfoI	RGCGCY	1 cut(s)	166
BglI	GCCNNNNNGGC	1 cut(s)	1106
BisI	GCNGC	8 cut(s)	466, 494, 632, 635, 798, 952, 1028, 1031
BlpI	GCTNAGC	2 cut(s)	351, 870
BlsI	GCNGC	8 cut(s)	467, 495, 633, 636, 799, 953, 1029, 1032
Bme1390I	CCNGG	1 cut(s)	1058
Bme18I	GGWCC	1 cut(s)	1083
BmeT110I	CYCGRG	2 cut(s)	170, 928
BmgBI	CACGTC	1 cut(s)	942
BmgT120I	GGNCC	1 cut(s)	1083
BmiI	GGNNCC	7 cut(s)	63, 69, 164, 732, 792, 1026, 1084
BmrFI	CCNGG	1 cut(s)	1058
BmrI	ACTGGG	1 cut(s)	981
BmsI	GCATC	2 cut(s)	426, 477
BmtI	GCTAGC	1 cut(s)	668
BmuI	ACTGGG	1 cut(s)	981
BoxI	GACNNNNGTC	1 cut(s)	1137
BpiI	GAAGAC	2 cut(s)	144, 978
BplI	GAGNNNNNCTC	2 cut(s)	1055, 1087
BpmI	CTGGAG	1 cut(s)	205
Bpu1102I	GCTNAGC	2 cut(s)	351, 870
BpuMI	CCSGG	1 cut(s)	1058
BsaHI	GRCGYC	2 cut(s)	144, 163
BsaI	GGTCTC	1 cut(s)	1145
BsaJI	CCNNGG	2 cut(s)	786, 1078
BsaWI	WCCGGW	2 cut(s)	268, 539
BsaXI	ACNNNNNCTCC	4 cut(s)	203, 233, 510, 540
Bsc4I	CCNNNNNNNGG	3 cut(s)	97, 461, 542
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	2 cut(s)	506, 987
Bse3DI	GCAATG	1 cut(s)	1000
BseDI	CCNNGG	2 cut(s)	786, 1078
BseGI	GGATG	2 cut(s)	106, 433
BseLI	CCNNNNNNNGG	3 cut(s)	97, 461, 542
BseMI	GCAATG	1 cut(s)	1000
BseMII	CTCAG	2 cut(s)	365, 969
BseNI	ACTGG	2 cut(s)	506, 987
BseRI	GAGGAG	3 cut(s)	179, 765, 1076
BseXI	GCAGC	5 cut(s)	477, 618, 784, 963, 1017
Bsh1236I	CGCG	1 cut(s)	183
BshFI	GGCC	3 cut(s)	110, 426, 1100
BshNI	GGYRCC	3 cut(s)	61, 162, 1024
BsiHKCI	CYCGRG	2 cut(s)	170, 928
BsiSI	CCGG	5 cut(s)	65, 107, 269, 540, 1058
BslFI	GGGAC	1 cut(s)	1096
BslI	CCNNNNNNNGG	3 cut(s)	97, 461, 542
BsmAI	GTCTC	2 cut(s)	130, 1145
BsmBI	CGTCTC	1 cut(s)	130
BsmFI	GGGAC	1 cut(s)	1096
BsmI	GAATGC	1 cut(s)	403
BsnI	GGCC	3 cut(s)	110, 426, 1100
Bso31I	GGTCTC	1 cut(s)	1145
BsoBI	CYCGRG	2 cut(s)	170, 928
Bsp143I	GATC	2 cut(s)	103, 330
Bsp1720I	GCTNAGC	2 cut(s)	351, 870
Bsp19I	CCATGG	2 cut(s)	786, 1078
BspACI	CCGC	9 cut(s)	181, 232, 494, 614, 634, 637, 1028, 1048, 1161
BspANI	GGCC	3 cut(s)	110, 426, 1100
BspCNI	CTCAG	2 cut(s)	364, 968
BspFNI	CGCG	1 cut(s)	183
BspLI	GGNNCC	7 cut(s)	63, 69, 164, 732, 792, 1026, 1084
BspOI	GCTAGC	1 cut(s)	668
BspPI	GGATC	2 cut(s)	98, 325
BspT107I	GGYRCC	3 cut(s)	61, 162, 1024
BspTNI	GGTCTC	1 cut(s)	1145
BsrDI	GCAATG	1 cut(s)	1000
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	2 cut(s)	506, 987
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	2 cut(s)	786, 1078
BssMI	GATC	2 cut(s)	103, 330
BssNI	GRCGYC	2 cut(s)	144, 163
BssSI	CACGAG	2 cut(s)	95, 127
BssT1I	CCWWGG	2 cut(s)	786, 1078
Bst2BI	CACGAG	2 cut(s)	95, 127
Bst4CI	ACNGT	1 cut(s)	251
Bst6I	CTCTTC	1 cut(s)	925
BstACI	GRCGYC	2 cut(s)	144, 163
BstAPI	GCANNNNNTGC	1 cut(s)	999
BstC8I	GCNNGC	5 cut(s)	66, 181, 236, 666, 1102
BstDEI	CTNAG	5 cut(s)	351, 810, 870, 955, 1135
BstDSI	CCRYGG	2 cut(s)	786, 1078
BstF5I	GGATG	2 cut(s)	106, 433
BstFNI	CGCG	1 cut(s)	183
BstH2I	RGCGCY	1 cut(s)	166
BstHHI	GCGC	1 cut(s)	165
BstKTI	GATC	2 cut(s)	106, 333
BstMAI	GTCTC	2 cut(s)	130, 1145
BstMBI	GATC	2 cut(s)	103, 330
BstMWI	GCNNNNNNNGC	7 cut(s)	231, 423, 797, 803, 866, 999, 1106
BstNSI	RCATGY	2 cut(s)	889, 1167
BstPAI	GACNNNNGTC	1 cut(s)	1137
BstSCI	CCNGG	1 cut(s)	1056
BstUI	CGCG	1 cut(s)	183
BstV1I	GCAGC	5 cut(s)	477, 618, 784, 963, 1017
BstV2I	GAAGAC	2 cut(s)	144, 978
BstX2I	RGATCY	1 cut(s)	330
BstXI	CCANNNNNNTGG	2 cut(s)	839, 1093
BstYI	RGATCY	1 cut(s)	330
BsuRI	GGCC	3 cut(s)	110, 426, 1100
BtgI	CCRYGG	2 cut(s)	786, 1078
BtrI	CACGTC	1 cut(s)	942
BtsCI	GGATG	2 cut(s)	106, 433
BtsIMutI	CAGTG	1 cut(s)	963
Cac8I	GCNNGC	5 cut(s)	66, 181, 236, 666, 1102
CaiI	CAGNNNCTG	1 cut(s)	857
CfoI	GCGC	1 cut(s)	165
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	1 cut(s)	1083
CseI	GACGC	2 cut(s)	152, 585
Csp6I	GTAC	3 cut(s)	88, 266, 844
CviQI	GTAC	3 cut(s)	88, 266, 844
DdeI	CTNAG	5 cut(s)	351, 810, 870, 955, 1135
DinI	GGCGCC	1 cut(s)	164
DpnI	GATC	2 cut(s)	105, 332
DpnII	GATC	2 cut(s)	103, 330
DrdI	GACNNNNNNGTC	1 cut(s)	122
DseDI	GACNNNNNNGTC	1 cut(s)	122
EaeI	YGGCCR	2 cut(s)	108, 424
Eam1104I	CTCTTC	1 cut(s)	925
EarI	CTCTTC	1 cut(s)	925
EciI	GGCGGA	3 cut(s)	221, 629, 652
Eco130I	CCWWGG	2 cut(s)	786, 1078
Eco31I	GGTCTC	1 cut(s)	1145
Eco47I	GGWCC	1 cut(s)	1083
Eco88I	CYCGRG	2 cut(s)	170, 928
EcoRI	GAATTC	1 cut(s)	781
EcoT14I	CCWWGG	2 cut(s)	786, 1078
EgeI	GGCGCC	1 cut(s)	164
EheI	GGCGCC	1 cut(s)	164
ErhI	CCWWGG	2 cut(s)	786, 1078
Esp3I	CGTCTC	1 cut(s)	130
FaqI	GGGAC	1 cut(s)	1096
FauI	CCCGC	1 cut(s)	188
FblI	GTMKAC	1 cut(s)	890
Fnu4HI	GCNGC	8 cut(s)	466, 494, 632, 635, 798, 952, 1028, 1031
FokI	GGATG	2 cut(s)	113, 420
Fsp4HI	GCNGC	8 cut(s)	466, 494, 632, 635, 798, 952, 1028, 1031
FspBI	CTAG	3 cut(s)	456, 665, 816
GlaI	GCGC	1 cut(s)	164
GluI	GCNGC	8 cut(s)	466, 494, 632, 635, 798, 952, 1028, 1031
GsuI	CTGGAG	1 cut(s)	205
HaeII	RGCGCY	1 cut(s)	166
HaeIII	GGCC	3 cut(s)	110, 426, 1100
HapII	CCGG	5 cut(s)	65, 107, 269, 540, 1058
HgaI	GACGC	2 cut(s)	152, 585
HhaI	GCGC	1 cut(s)	165
Hin1I	GRCGYC	2 cut(s)	144, 163
Hin6I	GCGC	1 cut(s)	163
HinP1I	GCGC	1 cut(s)	163
HinfI	GANTC	6 cut(s)	47, 482, 509, 515, 712, 964
HpaII	CCGG	5 cut(s)	65, 107, 269, 540, 1058
HphI	GGTGA	3 cut(s)	510, 525, 613
Hpy166II	GTNNAC	1 cut(s)	891
Hpy188I	TCNGA	9 cut(s)	9, 438, 481, 487, 514, 661, 711, 780, 1116
Hpy188III	TCNNGA	4 cut(s)	76, 170, 301, 968
Hpy8I	GTNNAC	1 cut(s)	891
Hpy99I	CGWCG	4 cut(s)	146, 158, 601, 898
HpyAV	CCTTC	4 cut(s)	82, 160, 460, 759
HpyCH4III	ACNGT	1 cut(s)	251
HpyCH4IV	ACGT	2 cut(s)	86, 941
HpyCH4V	TGCA	2 cut(s)	1002, 1054
HpyF10VI	GCNNNNNNNGC	7 cut(s)	231, 423, 797, 803, 866, 999, 1106
HpyF3I	CTNAG	5 cut(s)	351, 810, 870, 955, 1135
HpySE526I	ACGT	2 cut(s)	86, 941
Hsp92I	GRCGYC	2 cut(s)	144, 163
HspAI	GCGC	1 cut(s)	163
KasI	GGCGCC	1 cut(s)	162
KroI	GCCGGC	1 cut(s)	64
KroNI	GCCGGC	1 cut(s)	66
Kzo9I	GATC	2 cut(s)	103, 330
LmnI	GCTCC	5 cut(s)	73, 639, 736, 796, 859
Lsp1109I	GCAGC	5 cut(s)	477, 618, 784, 963, 1017
LweI	GCATC	2 cut(s)	426, 477
MaeI	CTAG	3 cut(s)	456, 665, 816
MaeII	ACGT	2 cut(s)	86, 941
MaeIII	GTNAC	4 cut(s)	506, 601, 767, 958
MalI	GATC	2 cut(s)	105, 332
MboI	GATC	2 cut(s)	103, 330
MboII	GAAGA	9 cut(s)	149, 271, 289, 351, 436, 744, 912, 983, 1054
MfeI	CAATTG	1 cut(s)	19
MflI	RGATCY	1 cut(s)	330
MluCI	AATT	5 cut(s)	19, 574, 739, 781, 823
Mly113I	GGCGCC	1 cut(s)	163
MlyI	GAGTC	4 cut(s)	41, 476, 503, 509
MmeI	TCCRAC	1 cut(s)	504
MroNI	GCCGGC	1 cut(s)	64
MseI	TTAA	2 cut(s)	549, 588
MslI	CAYNNNNRTG	2 cut(s)	653, 906
MspA1I	CMGCKG	1 cut(s)	1030
MspI	CCGG	5 cut(s)	65, 107, 269, 540, 1058
MspR9I	CCNGG	1 cut(s)	1058
MunI	CAATTG	1 cut(s)	19
Mva1269I	GAATGC	1 cut(s)	403
MvnI	CGCG	1 cut(s)	183
MwoI	GCNNNNNNNGC	7 cut(s)	231, 423, 797, 803, 866, 999, 1106
NaeI	GCCGGC	1 cut(s)	66
NarI	GGCGCC	1 cut(s)	163
NciI	CCSGG	1 cut(s)	1058
NcoI	CCATGG	2 cut(s)	786, 1078
NdeII	GATC	2 cut(s)	103, 330
NgoMIV	GCCGGC	1 cut(s)	64
NheI	GCTAGC	1 cut(s)	664
NlaIV	GGNNCC	7 cut(s)	63, 69, 164, 732, 792, 1026, 1084
NmeAIII	GCCGAG	1 cut(s)	393
NmuCI	GTSAC	3 cut(s)	506, 601, 958
NspI	RCATGY	2 cut(s)	889, 1167
PciI	ACATGT	1 cut(s)	885
PcsI	WCGNNNNNNNCGW	1 cut(s)	150
PctI	GAATGC	1 cut(s)	403
PdiI	GCCGGC	1 cut(s)	66
PfeI	GAWTC	2 cut(s)	712, 964
PflMI	CCANNNNNTGG	1 cut(s)	97
PkrI	GCNGC	8 cut(s)	467, 495, 633, 636, 799, 953, 1029, 1032
PleI	GAGTC	4 cut(s)	41, 476, 503, 509
PluTI	GGCGCC	1 cut(s)	166
PpsI	GAGTC	4 cut(s)	41, 476, 503, 509
PscI	ACATGT	1 cut(s)	885
PshAI	GACNNNNGTC	1 cut(s)	1137
PshBI	ATTAAT	1 cut(s)	588
PspN4I	GGNNCC	7 cut(s)	63, 69, 164, 732, 792, 1026, 1084
PspPI	GGNCC	1 cut(s)	1083
PstNI	CAGNNNCTG	1 cut(s)	857
PsuI	RGATCY	1 cut(s)	330
RsaI	GTAC	3 cut(s)	89, 267, 845
RsaNI	GTAC	3 cut(s)	88, 266, 844
RseI	CAYNNNNRTG	2 cut(s)	653, 906
SaqAI	TTAA	2 cut(s)	549, 588
SatI	GCNGC	8 cut(s)	466, 494, 632, 635, 798, 952, 1028, 1031
Sau3AI	GATC	2 cut(s)	103, 330
Sau96I	GGNCC	1 cut(s)	1083
SchI	GAGTC	4 cut(s)	41, 476, 503, 509
ScrFI	CCNGG	1 cut(s)	1058
SfaNI	GCATC	2 cut(s)	426, 477
SfoI	GGCGCC	1 cut(s)	164
SinI	GGWCC	1 cut(s)	1083
SmiMI	CAYNNNNRTG	2 cut(s)	653, 906
Sse9I	AATT	5 cut(s)	19, 574, 739, 781, 823
SsiI	CCGC	9 cut(s)	181, 232, 494, 614, 634, 637, 1028, 1048, 1161
SspDI	GGCGCC	1 cut(s)	162
SspMI	CTAG	3 cut(s)	456, 665, 816
StyD4I	CCNGG	1 cut(s)	1056
StyI	CCWWGG	2 cut(s)	786, 1078
TaaI	ACNGT	1 cut(s)	251
TaiI	ACGT	2 cut(s)	89, 944
TaqI	TCGA	3 cut(s)	45, 1040, 1073
TasI	AATT	5 cut(s)	19, 574, 739, 781, 823
TauI	GCSGC	3 cut(s)	496, 637, 1030
TfiI	GAWTC	2 cut(s)	712, 964
Tru1I	TTAA	2 cut(s)	549, 588
Tru9I	TTAA	2 cut(s)	549, 588
TscAI	CASTG	1 cut(s)	963
TseFI	GTSAC	3 cut(s)	506, 601, 958
TseI	GCWGC	5 cut(s)	465, 631, 797, 951, 1030
Tsp45I	GTSAC	3 cut(s)	506, 601, 958
TspDTI	ATGAA	1 cut(s)	929
TspRI	CASTG	1 cut(s)	963
Van91I	CCANNNNNTGG	1 cut(s)	97
VpaK11BI	GGWCC	1 cut(s)	1083
VspI	ATTAAT	1 cut(s)	588
XapI	RAATTY	1 cut(s)	781
XceI	RCATGY	2 cut(s)	889, 1167
XmiI	GTMKAC	1 cut(s)	890
XspI	CTAG	3 cut(s)	456, 665, 816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.