Prupe.1G444200_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0017629
Physical Location & Seq
Reverse (-)
37642207 .. 37644087
1881 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G444200.1

Sequence Viewer

Length: 1881 bp
ATGCGCCACCTCTACCAAATCCAAGCCCAAGCGACCATCAACCCATTACCCTCCATCGACCCAAACATCATCGCCGTCAAGCTCATCGGCGTCTGCGCCGACCACGCCAACATCCGCCACGTGGCGCTCGTATTCAACCACTTCCTCACAGCCCCAAACATCTTCGTCTACAATGCCCTCCTCAAAGCCTTTGCTCAAAACAATGACTGGCAGCACACCATATATTACTTCAATCGGCAACTGGGTTCGCCAAATGCTCCAGCCCCAGATGAGTACACGTTCACTTCTGTGCTCAAGGCCTGCGCTGGCCTTGCCCAAGTGACGGAGGGAGAGAAAGTTCACTGCTTTGTTGCTAAATACGGGTGTGAGGGTAATTTATTTGTCAGAAATTCGCTTACTGATATGTATTTCAAGGTGGGTAATTTCGGGATTGCCCAGAAGCTGTTTGATGAAATGGGTGTGAGAGATGTTGTTTCATGGAACACTTTGGTTTCGGGGTATTGCTTGAGCGGGCGGGTTGATAAGGCCAGGTGGGTGTTTGATGGGATGGCAGAGAAGACTTTGTTTTCTTGGTCGACTATGATCACTGCGTATGCGAAGTTCGGTGAGTTGGGGGAAGCTCGCCGTCTTTTCGATGAGATGCCGGAGAGGAATGTGGTTTCATGGAATGCGATGATTGCGGGGTATGCGCAGAATGAGAAGTATGCTGAGGCCATTGGTTTGTTTAGGCAAATGCAACAGTATGGATTGGCGCCAAATGATGTCACGCTTGTTAGTGTGTTGTCTGCTTGCGCTCATCTTGGCGCACTTGACTTGGGGAAGTGGATTGATAAGTTTATAAGACAGCGTGGGATGGAGTTGGGTTTGTTTTTGGGGAATGCATTGGCAGATATGTATGCCAAGTGTGGCTGCATAGCCGAGGCTAAGCTGGTTTTTGGAAAGATGCATCAGAGGGATGTGATATCTTGGAGCATTATCATTACTGGGTTGGCCATGAATGGCCATGCCGATGAAGCTTTCTGGTGTTTCAATAAAATGATTGAGCATGAGGTGAAGCCAAATGACATTACTTTCATGGGCTTATTGACAGCGTGCACTCATGTTGGCTTGGTCGACAAGGGGCTTGAGTATTTCGATATGATGGACAAAAGATATGGGACCTTCCCCAAGGTTGAGCATTATGGTTGTGTGGTTGATCTTCTCAGCCGCGCCGGCCGCCTTGTTGAAGCAGAAGATTTGATCAACTCCATGCCTGTGAAGCCCAATGTTATAGTCTGGGGTGCATTGCTTGGTGGTTGTCGGATTTATAAAGACACCGAGAGAGGTGAACGCGTTGTGCAACACATTCTCGAGCTAGATTCCGATCATTCTGGAAGCTATGTCTATCTTGCCAATGTATATACTTCAATGGGTAGGCTGGATGATGCAGCAAACTGTAGGCTGAGGATGCGAGACAAAGGCGTAACGAAAACACCGGGCTGTAGTTGGATAGAGGTGGATAACATAGTCCATGAGTTCTTCATGGGAGACCTGTCCCATCCTCAGCTGGACAAGATATACTGGATGATTAGAGAACTAAGGAGGAAAATGAAGCTAGCTGGGTACAAACCGAAGACCGATCTGGTCCTCCATACTATTGATGAAGAAGAGAAAGAGGATGCTCTGTCGGTTCATAGTGAGAAGCTGGCCATTGCATTTGGCCTTATCAGTACTAGTCCAGGAACCACCATCCGAATTGTGAAGAATTTGAGGGTTTGTAATGACTGCCATGATGCAACAAAAATAATCTCCAAAATCGTTGAGCGAGAGATTATCGTGCGAGACCGCAGTCGCTTCCATCATTTCAAGGATGGGAAGTGTTCTTGCAATGACTACTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

627

Amino Acids

70.76

Weight (kDa)

6.72

Isoelectric Point (pI)

30.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017629)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g24230
malus_domestica MD15G1089600.v1.1
prunus_persica Prupe.1G444200_v2.0.a1
pyrus_communis pycom15g08400
rosa_chinensis RchiOBHm_Chr5g0043351
rosa_laevigata RLG00000034182
rosa_multiflora Rmu_sc0000060.1_g000011 Rmu_sc0000060.1_g000039
rosa_roxburghii Rroxscaffold_1G00037500
rosa_rugosa Rorug05G0205400
rosa_samantha Rh5CG327400
rosa_wichuraiana Rw5G027000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 839, 1308
Acc16I TGCGCA 1 cut(s) 690
AccB1I GGYRCC 1 cut(s) 751
AccBSI CCGCTC 1 cut(s) 510
AccI GTMKAC 3 cut(s) 168, 575, 1113
AccII CGCG 2 cut(s) 1209, 1332
AciI CCGC 7 cut(s) 115, 510, 514, 680, 1207, 1216, 1825
AcoI YGGCCR 4 cut(s) 990, 1000, 1213, 1686
AcsI RAATTY 2 cut(s) 388, 1744
AcvI CACGTG 1 cut(s) 121
AcyI GRCGYC 2 cut(s) 90, 752
AfaI GTAC 3 cut(s) 275, 1604, 1711
AfiI CCNNNNNNNGG 2 cut(s) 121, 322
AflIII ACRYGT 2 cut(s) 276, 1330
AgsI TTSAA 7 cut(s) 136, 232, 412, 1030, 1226, 1407, 1846
AhlI ACTAGT 1 cut(s) 1712
AjnI CCWGG 2 cut(s) 527, 1717
AleI CACNNNNGTG 1 cut(s) 287
AloI GAACNNNNNNTCC 2 cut(s) 321, 353
Alw21I GWGCWC 2 cut(s) 294, 1097
Alw26I GTCTC 3 cut(s) 1446, 1521, 1815
Alw44I GTGCAC 1 cut(s) 1093
AlwNI CAGNNNCTG 1 cut(s) 442
Ama87I CYCGRG 1 cut(s) 1349
AoxI GGCC 9 cut(s) 297, 307, 525, 711, 990, 1000, 1213, 1686, 1699
ApaLI GTGCAC 1 cut(s) 1093
ApeKI GCWGC 3 cut(s) 211, 909, 1427
ApoI RAATTY 2 cut(s) 388, 1744
AspLEI GCGC 9 cut(s) 6, 98, 127, 305, 691, 754, 794, 806, 1211
AspS9I GGNCC 2 cut(s) 1158, 1624
AsuC2I CCSGG 1 cut(s) 1476
AsuHPI GGTGA 3 cut(s) 617, 1063, 1337
AsuNHI GCTAGC 1 cut(s) 1594
AvaI CYCGRG 1 cut(s) 1349
AvaII GGWCC 2 cut(s) 1158, 1624
BaeGI GKGCMC 1 cut(s) 1097
BalI TGGCCA 3 cut(s) 992, 1002, 1688
BanI GGYRCC 1 cut(s) 751
BbrPI CACGTG 1 cut(s) 121
BbsI GAAGAC 2 cut(s) 563, 1619
Bbv12I GWGCWC 2 cut(s) 294, 1097
BbvCI CCTCAGC 3 cut(s) 708, 1442, 1542
BbvI GCAGC 3 cut(s) 223, 896, 1439
BceAI ACGGC 2 cut(s) 59, 609
BciT130I CCWGG 2 cut(s) 529, 1719
BclI TGATCA 2 cut(s) 582, 1239
BcnI CCSGG 1 cut(s) 1476
BcoDI GTCTC 3 cut(s) 1446, 1521, 1815
BcuI ACTAGT 1 cut(s) 1712
BfaI CTAG 3 cut(s) 1355, 1595, 1713
BfmI CTRYAG 2 cut(s) 1435, 1480
BfoI RGCGCY 2 cut(s) 128, 755
BglI GCCNNNNNGGC 1 cut(s) 1212
BisI GCNGC 5 cut(s) 212, 910, 1207, 1216, 1428
BlpI GCTNAGC 1 cut(s) 924
BlsI GCNGC 5 cut(s) 213, 911, 1208, 1217, 1429
BmcAI AGTACT 1 cut(s) 1711
Bme1390I CCNGG 3 cut(s) 529, 1476, 1719
Bme18I GGWCC 2 cut(s) 1158, 1624
BmeT110I CYCGRG 1 cut(s) 1349
BmgT120I GGNCC 2 cut(s) 1158, 1624
BmiI GGNNCC 3 cut(s) 753, 1159, 1723
BmrFI CCNGG 3 cut(s) 529, 1476, 1719
BmrI ACTGGG 2 cut(s) 251, 993
BmsI GCATC 7 cut(s) 630, 933, 955, 1414, 1437, 1648, 1762
BmtI GCTAGC 1 cut(s) 1598
BmuI ACTGGG 2 cut(s) 251, 993
BoxI GACNNNNGTC 1 cut(s) 1827
BpiI GAAGAC 2 cut(s) 563, 1619
BpmI CTGGAG 1 cut(s) 243
Bpu10I CCTNAGC 3 cut(s) 708, 1442, 1542
Bpu1102I GCTNAGC 1 cut(s) 924
BpuEI CTTGAG 3 cut(s) 278, 526, 1145
BpuMI CCSGG 1 cut(s) 1476
BsaAI YACGTR 1 cut(s) 121
BsaBI GATNNNNATC 1 cut(s) 1362
BsaHI GRCGYC 2 cut(s) 90, 752
BsaI GGTCTC 2 cut(s) 1521, 1815
BsaJI CCNNGG 2 cut(s) 918, 1167
BsaXI ACNNNNNCTCC 2 cut(s) 321, 351
Bsc4I CCNNNNNNNGG 2 cut(s) 121, 322
Bse118I RCCGGY 1 cut(s) 1211
Bse1I ACTGG 5 cut(s) 212, 246, 988, 1565, 1880
Bse3DI GCAATG 3 cut(s) 1283, 1689, 1873
Bse8I GATNNNNATC 1 cut(s) 1362
BseBI CCWGG 2 cut(s) 529, 1719
BseDI CCNNGG 2 cut(s) 918, 1167
BseJI GATNNNNATC 1 cut(s) 1362
BseLI CCNNNNNNNGG 2 cut(s) 121, 322
BseMI GCAATG 3 cut(s) 1283, 1689, 1873
BseMII CTCAG 4 cut(s) 699, 1216, 1433, 1556
BseNI ACTGG 5 cut(s) 212, 246, 988, 1565, 1880
BseRI GAGGAG 1 cut(s) 170
BseSI GKGCMC 1 cut(s) 1097
BseX3I CGGCCG 1 cut(s) 1213
BseXI GCAGC 3 cut(s) 223, 896, 1439
BseYI CCCAGC 1 cut(s) 1598
Bsh1236I CGCG 2 cut(s) 1209, 1332
Bsh1285I CGRYCG 1 cut(s) 1216
BshFI GGCC 9 cut(s) 299, 309, 527, 713, 992, 1002, 1215, 1688, 1701
BshNI GGYRCC 1 cut(s) 751
BsiEI CGRYCG 1 cut(s) 1216
BsiHKAI GWGCWC 2 cut(s) 294, 1097
BsiHKCI CYCGRG 1 cut(s) 1349
BsiSI CCGG 3 cut(s) 644, 1212, 1475
BslFI GGGAC 2 cut(s) 1171, 1519
BslI CCNNNNNNNGG 2 cut(s) 121, 322
BsmAI GTCTC 3 cut(s) 1446, 1521, 1815
BsmFI GGGAC 2 cut(s) 1171, 1519
BsmI GAATGC 2 cut(s) 673, 883
BsnI GGCC 9 cut(s) 299, 309, 527, 713, 992, 1002, 1215, 1688, 1701
Bso31I GGTCTC 2 cut(s) 1521, 1815
BsoBI CYCGRG 1 cut(s) 1349
Bsp1286I GDGCHC 2 cut(s) 294, 1097
Bsp143I GATC 5 cut(s) 582, 1195, 1239, 1363, 1618
Bsp1720I GCTNAGC 1 cut(s) 924
BspACI CCGC 7 cut(s) 115, 510, 514, 680, 1207, 1216, 1825
BspANI GGCC 9 cut(s) 299, 309, 527, 713, 992, 1002, 1215, 1688, 1701
BspCNI CTCAG 4 cut(s) 700, 1215, 1434, 1555
BspFNI CGCG 2 cut(s) 1209, 1332
BspLI GGNNCC 3 cut(s) 753, 1159, 1723
BspOI GCTAGC 1 cut(s) 1598
BspT107I GGYRCC 1 cut(s) 751
BspTNI GGTCTC 2 cut(s) 1521, 1815
BsrBI CCGCTC 1 cut(s) 510
BsrDI GCAATG 3 cut(s) 1283, 1689, 1873
BsrFI RCCGGY 1 cut(s) 1211
BsrI ACTGG 5 cut(s) 212, 246, 988, 1565, 1880
BssAI RCCGGY 1 cut(s) 1211
BssECI CCNNGG 2 cut(s) 918, 1167
BssMI GATC 5 cut(s) 582, 1195, 1239, 1363, 1618
BssNI GRCGYC 2 cut(s) 90, 752
BssT1I CCWWGG 1 cut(s) 1167
Bst2UI CCWGG 2 cut(s) 529, 1719
Bst4CI ACNGT 2 cut(s) 741, 1436
Bst6I CTCTTC 1 cut(s) 1641
BstACI GRCGYC 2 cut(s) 90, 752
BstBAI YACGTR 1 cut(s) 121
BstC8I GCNNGC 9 cut(s) 301, 307, 512, 622, 790, 1093, 1213, 1596, 1686
BstDEI CTNAG 6 cut(s) 708, 924, 1202, 1442, 1542, 1577
BstFNI CGCG 2 cut(s) 1209, 1332
BstH2I RGCGCY 2 cut(s) 128, 755
BstHHI GCGC 9 cut(s) 6, 98, 127, 305, 691, 754, 794, 806, 1211
BstKTI GATC 5 cut(s) 585, 1198, 1242, 1366, 1621
BstMAI GTCTC 3 cut(s) 1446, 1521, 1815
BstMBI GATC 5 cut(s) 582, 1195, 1239, 1363, 1618
BstMCI CGRYCG 1 cut(s) 1216
BstMWI GCNNNNNNNGC 9 cut(s) 104, 311, 677, 686, 1013, 1212, 1215, 1258, 1447
BstNI CCWGG 2 cut(s) 529, 1719
BstPAI GACNNNNGTC 1 cut(s) 1827
BstSCI CCNGG 3 cut(s) 527, 1474, 1717
BstSFI CTRYAG 2 cut(s) 1435, 1480
BstSLI GKGCMC 1 cut(s) 1097
BstUI CGCG 2 cut(s) 1209, 1332
BstV1I GCAGC 3 cut(s) 223, 896, 1439
BstV2I GAAGAC 2 cut(s) 563, 1619
BstZI CGGCCG 1 cut(s) 1213
BsuRI GGCC 9 cut(s) 299, 309, 527, 713, 992, 1002, 1215, 1688, 1701
BtgZI GCGATG 2 cut(s) 55, 686
BtsI GCAGTG 2 cut(s) 340, 585
BtsIMutI CAGTG 2 cut(s) 340, 585
Cac8I GCNNGC 9 cut(s) 301, 307, 512, 622, 790, 1093, 1213, 1596, 1686
CaiI CAGNNNCTG 1 cut(s) 442
CfoI GCGC 9 cut(s) 6, 98, 127, 305, 691, 754, 794, 806, 1211
Cfr10I RCCGGY 1 cut(s) 1211
Cfr13I GGNCC 2 cut(s) 1158, 1624
CseI GACGC 1 cut(s) 79
Csp6I GTAC 3 cut(s) 274, 1603, 1710
CviQI GTAC 3 cut(s) 274, 1603, 1710
DdeI CTNAG 6 cut(s) 708, 924, 1202, 1442, 1542, 1577
DinI GGCGCC 1 cut(s) 753
DpnI GATC 5 cut(s) 584, 1197, 1241, 1365, 1620
DpnII GATC 5 cut(s) 582, 1195, 1239, 1363, 1618
EaeI YGGCCR 4 cut(s) 990, 1000, 1213, 1686
EagI CGGCCG 1 cut(s) 1213
Eam1104I CTCTTC 1 cut(s) 1641
EarI CTCTTC 1 cut(s) 1641
EciI GGCGGA 1 cut(s) 104
EclXI CGGCCG 1 cut(s) 1213
Eco130I CCWWGG 1 cut(s) 1167
Eco147I AGGCCT 1 cut(s) 299
Eco31I GGTCTC 2 cut(s) 1521, 1815
Eco32I GATATC 1 cut(s) 963
Eco47I GGWCC 2 cut(s) 1158, 1624
Eco52I CGGCCG 1 cut(s) 1213
Eco72I CACGTG 1 cut(s) 121
Eco88I CYCGRG 1 cut(s) 1349
EcoO109I RGGNCCY 1 cut(s) 1158
EcoRII CCWGG 2 cut(s) 527, 1717
EcoRV GATATC 1 cut(s) 963
EcoT14I CCWWGG 1 cut(s) 1167
EcoT22I ATGCAT 2 cut(s) 883, 948
EgeI GGCGCC 1 cut(s) 753
EheI GGCGCC 1 cut(s) 753
ErhI CCWWGG 1 cut(s) 1167
FaqI GGGAC 2 cut(s) 1171, 1519
FauI CCCGC 3 cut(s) 503, 507, 673
FbaI TGATCA 2 cut(s) 582, 1239
FblI GTMKAC 3 cut(s) 168, 575, 1113
Fnu4HI GCNGC 5 cut(s) 212, 910, 1207, 1216, 1428
Fsp4HI GCNGC 5 cut(s) 212, 910, 1207, 1216, 1428
FspBI CTAG 3 cut(s) 1355, 1595, 1713
FspI TGCGCA 1 cut(s) 690
GlaI GCGC 9 cut(s) 5, 97, 126, 304, 690, 753, 793, 805, 1210
GluI GCNGC 5 cut(s) 212, 910, 1207, 1216, 1428
GsaI CCCAGC 1 cut(s) 1602
GsuI CTGGAG 1 cut(s) 243
HaeII RGCGCY 2 cut(s) 128, 755
HaeIII GGCC 9 cut(s) 299, 309, 527, 713, 992, 1002, 1215, 1688, 1701
HapII CCGG 3 cut(s) 644, 1212, 1475
HgaI GACGC 1 cut(s) 79
HhaI GCGC 9 cut(s) 6, 98, 127, 305, 691, 754, 794, 806, 1211
Hin1I GRCGYC 2 cut(s) 90, 752
Hin6I GCGC 9 cut(s) 4, 96, 125, 303, 689, 752, 792, 804, 1209
HinP1I GCGC 9 cut(s) 4, 96, 125, 303, 689, 752, 792, 804, 1209
HincII GTYRAC 2 cut(s) 576, 1114
HindII GTYRAC 2 cut(s) 576, 1114
HindIII AAGCTT 1 cut(s) 1014
HinfI GANTC 1 cut(s) 1358
HpaII CCGG 3 cut(s) 644, 1212, 1475
HphI GGTGA 3 cut(s) 617, 1063, 1337
Hpy166II GTNNAC 8 cut(s) 169, 276, 282, 340, 576, 1095, 1114, 1328
Hpy188I TCNGA 5 cut(s) 386, 951, 1302, 1363, 1733
Hpy188III TCNNGA 3 cut(s) 427, 1349, 1371
Hpy8I GTNNAC 8 cut(s) 169, 276, 282, 340, 576, 1095, 1114, 1328
HpyAV CCTTC 1 cut(s) 1171
HpyCH4III ACNGT 2 cut(s) 741, 1436
HpyCH4IV ACGT 2 cut(s) 120, 278
HpyF10VI GCNNNNNNNGC 9 cut(s) 104, 311, 677, 686, 1013, 1212, 1215, 1258, 1447
HpyF3I CTNAG 6 cut(s) 708, 924, 1202, 1442, 1542, 1577
HpySE526I ACGT 2 cut(s) 120, 278
Hsp92I GRCGYC 2 cut(s) 90, 752
HspAI GCGC 9 cut(s) 4, 96, 125, 303, 689, 752, 792, 804, 1209
KasI GGCGCC 1 cut(s) 751
KroI GCCGGC 1 cut(s) 1211
KroNI GCCGGC 1 cut(s) 1213
Ksp22I TGATCA 2 cut(s) 582, 1239
Kzo9I GATC 5 cut(s) 582, 1195, 1239, 1363, 1618
LmnI GCTCC 2 cut(s) 262, 969
Lsp1109I GCAGC 3 cut(s) 223, 896, 1439
LweI GCATC 7 cut(s) 630, 933, 955, 1414, 1437, 1648, 1762
MaeI CTAG 3 cut(s) 1355, 1595, 1713
MaeII ACGT 2 cut(s) 120, 278
MaeIII GTNAC 3 cut(s) 319, 763, 1462
MalI GATC 5 cut(s) 584, 1197, 1241, 1365, 1620
MbiI CCGCTC 1 cut(s) 510
MboI GATC 5 cut(s) 582, 1195, 1239, 1363, 1618
MboII GAAGA 9 cut(s) 154, 568, 1190, 1244, 1510, 1624, 1655, 1658, 1753
MhlI GDGCHC 2 cut(s) 294, 1097
MlsI TGGCCA 3 cut(s) 992, 1002, 1688
MluCI AATT 5 cut(s) 373, 388, 421, 1734, 1744
MluI ACGCGT 1 cut(s) 1330
MluNI TGGCCA 3 cut(s) 992, 1002, 1688
Mly113I GGCGCC 1 cut(s) 752
MmeI TCCRAC 2 cut(s) 1280, 1466
Mox20I TGGCCA 3 cut(s) 992, 1002, 1688
Mph1103I ATGCAT 2 cut(s) 883, 948
MroNI GCCGGC 1 cut(s) 1211
MscI TGGCCA 3 cut(s) 992, 1002, 1688
MslI CAYNNNNRTG 3 cut(s) 287, 1008, 1253
Msp20I TGGCCA 3 cut(s) 992, 1002, 1688
MspA1I CMGCKG 1 cut(s) 1546
MspI CCGG 3 cut(s) 644, 1212, 1475
MspR9I CCNGG 3 cut(s) 529, 1476, 1719
Mva1269I GAATGC 2 cut(s) 673, 883
MvaI CCWGG 2 cut(s) 529, 1719
MvnI CGCG 2 cut(s) 1209, 1332
MwoI GCNNNNNNNGC 9 cut(s) 104, 311, 677, 686, 1013, 1212, 1215, 1258, 1447
NaeI GCCGGC 1 cut(s) 1213
NarI GGCGCC 1 cut(s) 752
NciI CCSGG 1 cut(s) 1476
NdeII GATC 5 cut(s) 582, 1195, 1239, 1363, 1618
NgoMIV GCCGGC 1 cut(s) 1211
NheI GCTAGC 1 cut(s) 1594
NlaIV GGNNCC 3 cut(s) 753, 1159, 1723
NmeAIII GCCGAG 1 cut(s) 943
NmuCI GTSAC 2 cut(s) 319, 763
NsbI TGCGCA 1 cut(s) 690
NsiI ATGCAT 2 cut(s) 883, 948
OliI CACNNNNGTG 1 cut(s) 287
PaeR7I CTCGAG 1 cut(s) 1349
PceI AGGCCT 1 cut(s) 299
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PctI GAATGC 2 cut(s) 673, 883
PdiI GCCGGC 1 cut(s) 1213
PfeI GAWTC 1 cut(s) 1358
PfoI TCCNGGA 1 cut(s) 1717
PkrI GCNGC 5 cut(s) 213, 911, 1208, 1217, 1429
PluTI GGCGCC 1 cut(s) 755
PmaCI CACGTG 1 cut(s) 121
PmlI CACGTG 1 cut(s) 121
Ppu21I YACGTR 1 cut(s) 121
PpuMI RGGWCCY 1 cut(s) 1158
PshAI GACNNNNGTC 1 cut(s) 1827
PsiI TTATAA 2 cut(s) 839, 1308
Psp5II RGGWCCY 1 cut(s) 1158
Psp6I CCWGG 2 cut(s) 527, 1717
PspCI CACGTG 1 cut(s) 121
PspFI CCCAGC 1 cut(s) 1598
PspGI CCWGG 2 cut(s) 527, 1717
PspN4I GGNNCC 3 cut(s) 753, 1159, 1723
PspPI GGNCC 2 cut(s) 1158, 1624
PspPPI RGGWCCY 1 cut(s) 1158
PsrI GAACNNNNNNTAC 2 cut(s) 584, 616
PstNI CAGNNNCTG 1 cut(s) 442
PvuII CAGCTG 1 cut(s) 1546
RsaI GTAC 3 cut(s) 275, 1604, 1711
RsaNI GTAC 3 cut(s) 274, 1603, 1710
RseI CAYNNNNRTG 3 cut(s) 287, 1008, 1253
SalI GTCGAC 2 cut(s) 574, 1112
SatI GCNGC 5 cut(s) 212, 910, 1207, 1216, 1428
Sau3AI GATC 5 cut(s) 582, 1195, 1239, 1363, 1618
Sau96I GGNCC 2 cut(s) 1158, 1624
ScaI AGTACT 1 cut(s) 1711
ScrFI CCNGG 3 cut(s) 529, 1476, 1719
SduI GDGCHC 2 cut(s) 294, 1097
SfaNI GCATC 7 cut(s) 630, 933, 955, 1414, 1437, 1648, 1762
SfcI CTRYAG 2 cut(s) 1435, 1480
SfoI GGCGCC 1 cut(s) 753
Sfr274I CTCGAG 1 cut(s) 1349
SinI GGWCC 2 cut(s) 1158, 1624
SlaI CTCGAG 1 cut(s) 1349
SmiMI CAYNNNNRTG 3 cut(s) 287, 1008, 1253
SmlI CTYRAG 4 cut(s) 293, 505, 1124, 1349
SmoI CTYRAG 4 cut(s) 293, 505, 1124, 1349
SpeI ACTAGT 1 cut(s) 1712
Sse9I AATT 5 cut(s) 373, 388, 421, 1734, 1744
SseBI AGGCCT 1 cut(s) 299
SsiI CCGC 7 cut(s) 115, 510, 514, 680, 1207, 1216, 1825
SspDI GGCGCC 1 cut(s) 751
SspMI CTAG 3 cut(s) 1355, 1595, 1713
StuI AGGCCT 1 cut(s) 299
StyD4I CCNGG 3 cut(s) 527, 1474, 1717
StyI CCWWGG 1 cut(s) 1167
TaaI ACNGT 2 cut(s) 741, 1436
TaiI ACGT 2 cut(s) 123, 281
TaqI TCGA 6 cut(s) 57, 575, 633, 1113, 1134, 1350
TaqII GACCGA 1 cut(s) 1631
TasI AATT 5 cut(s) 373, 388, 421, 1734, 1744
TatI WGTACW 2 cut(s) 273, 1709
TauI GCSGC 2 cut(s) 1209, 1218
TfiI GAWTC 1 cut(s) 1358
TscAI CASTG 2 cut(s) 347, 592
TseFI GTSAC 2 cut(s) 319, 763
TseI GCWGC 3 cut(s) 211, 909, 1427
Tsp45I GTSAC 2 cut(s) 319, 763
TspGWI ACGGA 1 cut(s) 338
TspRI CASTG 2 cut(s) 347, 592
VneI GTGCAC 1 cut(s) 1093
VpaK11BI GGWCC 2 cut(s) 1158, 1624
XapI RAATTY 2 cut(s) 388, 1744
XhoI CTCGAG 1 cut(s) 1349
XmiI GTMKAC 3 cut(s) 168, 575, 1113
XspI CTAG 3 cut(s) 1355, 1595, 1713
ZrmI AGTACT 1 cut(s) 1711
Zsp2I ATGCAT 2 cut(s) 883, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.