Di-glucose binding within endoplasmic reticulum
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g28980 FvH4_2g28980 |
| prunus_persica | Prupe.1G481600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0297831 |
| rosa_laevigata | RLG00000011557 |
| rosa_multiflora | Rmu_sc0003137.1_g000013 |
| rosa_roxburghii | Rroxscaffold_7G00170160 Rroxscaffold_7G00179010 |
| rosa_rugosa | Rorug06G0275800 |
| rosa_samantha | Rh6CG400800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1655 |
| AarI | CACCTGC | 2 cut(s) | 239, 1816 |
| AatII | GACGTC | 1 cut(s) | 1581 |
| Acc36I | ACCTGC | 3 cut(s) | 239, 1012, 1816 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 437 |
| AccI | GTMKAC | 1 cut(s) | 1581 |
| AciI | CCGC | 1 cut(s) | 1866 |
| AclI | AACGTT | 1 cut(s) | 1674 |
| AclWI | GGATC | 3 cut(s) | 149, 1645, 1853 |
| AcsI | RAATTY | 7 cut(s) | 13, 279, 647, 855, 947, 1066, 1078 |
| AcuI | CTGAAG | 2 cut(s) | 269, 323 |
| AcvI | CACGTG | 1 cut(s) | 203 |
| AcyI | GRCGYC | 1 cut(s) | 1578 |
| AfaI | GTAC | 5 cut(s) | 339, 1117, 1379, 1430, 1466 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 397, 437, 1061, 1148, 1742, 1796 |
| AflIII | ACRYGT | 1 cut(s) | 202 |
| AjnI | CCWGG | 3 cut(s) | 284, 894, 1921 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 76, 108 |
| Alw21I | GWGCWC | 3 cut(s) | 733, 1196, 1651 |
| Alw26I | GTCTC | 2 cut(s) | 972, 1048 |
| Alw44I | GTGCAC | 1 cut(s) | 1192 |
| AlwI | GGATC | 3 cut(s) | 149, 1645, 1853 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 231, 422, 1868 |
| Ama87I | CYCGRG | 1 cut(s) | 1789 |
| AoxI | GGCC | 5 cut(s) | 347, 706, 1246, 1471, 1753 |
| ApaI | GGGCCC | 1 cut(s) | 351 |
| ApaLI | GTGCAC | 1 cut(s) | 1192 |
| ApeKI | GCWGC | 8 cut(s) | 31, 34, 52, 225, 1301, 1338, 1728, 1862 |
| ApoI | RAATTY | 7 cut(s) | 13, 279, 647, 855, 947, 1066, 1078 |
| AspLEI | GCGC | 1 cut(s) | 1569 |
| AspS9I | GGNCC | 8 cut(s) | 347, 348, 419, 491, 563, 707, 1370, 1754 |
| AsuC2I | CCSGG | 2 cut(s) | 1790, 1791 |
| AsuHPI | GGTGA | 6 cut(s) | 232, 287, 748, 773, 782, 1604 |
| AsuII | TTCGAA | 1 cut(s) | 1665 |
| AvaI | CYCGRG | 1 cut(s) | 1789 |
| AvaII | GGWCC | 4 cut(s) | 419, 491, 563, 1370 |
| AxyI | CCTNAGG | 1 cut(s) | 573 |
| BaeGI | GKGCMC | 3 cut(s) | 351, 429, 1196 |
| BanII | GRGCYC | 1 cut(s) | 351 |
| BbrPI | CACGTG | 1 cut(s) | 203 |
| BbsI | GAAGAC | 1 cut(s) | 1209 |
| Bbv12I | GWGCWC | 3 cut(s) | 733, 1196, 1651 |
| BbvCI | CCTCAGC | 1 cut(s) | 392 |
| BbvI | GCAGC | 8 cut(s) | 18, 21, 64, 237, 1288, 1350, 1715, 1874 |
| BccI | CCATC | 3 cut(s) | 359, 1216, 1320 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1428, 1462 |
| BciT130I | CCWGG | 3 cut(s) | 286, 896, 1923 |
| BcnI | CCSGG | 2 cut(s) | 1790, 1791 |
| BcoDI | GTCTC | 2 cut(s) | 972, 1048 |
| BfaI | CTAG | 3 cut(s) | 743, 1037, 1415 |
| BfuAI | ACCTGC | 3 cut(s) | 239, 1012, 1816 |
| BisI | GCNGC | 9 cut(s) | 32, 35, 53, 226, 1302, 1339, 1729, 1863, 1866 |
| BlpI | GCTNAGC | 1 cut(s) | 140 |
| BlsI | GCNGC | 9 cut(s) | 33, 36, 54, 227, 1303, 1340, 1730, 1864, 1867 |
| Bme1390I | CCNGG | 5 cut(s) | 286, 896, 1790, 1791, 1923 |
| Bme18I | GGWCC | 4 cut(s) | 419, 491, 563, 1370 |
| BmeT110I | CYCGRG | 1 cut(s) | 1789 |
| BmgT120I | GGNCC | 8 cut(s) | 347, 348, 419, 491, 563, 707, 1370, 1754 |
| BmiI | GGNNCC | 2 cut(s) | 349, 1756 |
| BmrFI | CCNGG | 5 cut(s) | 286, 896, 1790, 1791, 1923 |
| BmrI | ACTGGG | 2 cut(s) | 130, 1304 |
| BmsI | GCATC | 5 cut(s) | 191, 623, 1174, 1268, 1906 |
| BmuI | ACTGGG | 2 cut(s) | 130, 1304 |
| BoxI | GACNNNNGTC | 1 cut(s) | 373 |
| BpiI | GAAGAC | 1 cut(s) | 1209 |
| BpmI | CTGGAG | 1 cut(s) | 1306 |
| Bpu10I | CCTNAGC | 1 cut(s) | 392 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 140 |
| Bpu14I | TTCGAA | 1 cut(s) | 1665 |
| BpuEI | CTTGAG | 2 cut(s) | 772, 1009 |
| BpuMI | CCSGG | 2 cut(s) | 1790, 1791 |
| BsaAI | YACGTR | 1 cut(s) | 203 |
| BsaHI | GRCGYC | 1 cut(s) | 1578 |
| BsaJI | CCNNGG | 7 cut(s) | 284, 285, 973, 1177, 1373, 1789, 1813 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1304, 1334 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 397, 437, 1061, 1148, 1742, 1796 |
| Bse118I | RCCGGY | 1 cut(s) | 221 |
| Bse1I | ACTGG | 6 cut(s) | 125, 481, 565, 637, 925, 1299 |
| Bse21I | CCTNAGG | 1 cut(s) | 573 |
| Bse3DI | GCAATG | 5 cut(s) | 47, 494, 695, 1533, 1736 |
| BseBI | CCWGG | 3 cut(s) | 286, 896, 1923 |
| BseDI | CCNNGG | 7 cut(s) | 284, 285, 973, 1177, 1373, 1789, 1813 |
| BseGI | GGATG | 7 cut(s) | 182, 351, 1259, 1617, 1695, 1862, 1918 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 397, 437, 1061, 1148, 1742, 1796 |
| BseMI | GCAATG | 5 cut(s) | 47, 494, 695, 1533, 1736 |
| BseMII | CTCAG | 4 cut(s) | 131, 406, 587, 1451 |
| BseNI | ACTGG | 6 cut(s) | 125, 481, 565, 637, 925, 1299 |
| BseSI | GKGCMC | 3 cut(s) | 351, 429, 1196 |
| BseXI | GCAGC | 8 cut(s) | 18, 21, 64, 237, 1288, 1350, 1715, 1874 |
| BsgI | GTGCAG | 2 cut(s) | 48, 1881 |
| BshFI | GGCC | 5 cut(s) | 349, 708, 1248, 1473, 1755 |
| BsiHKAI | GWGCWC | 3 cut(s) | 733, 1196, 1651 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1789 |
| BsiSI | CCGG | 4 cut(s) | 222, 849, 1263, 1790 |
| BslFI | GGGAC | 3 cut(s) | 137, 706, 1772 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 397, 437, 1061, 1148, 1742, 1796 |
| BsmAI | GTCTC | 2 cut(s) | 972, 1048 |
| BsmFI | GGGAC | 3 cut(s) | 137, 706, 1772 |
| BsmI | GAATGC | 2 cut(s) | 162, 1731 |
| BsnI | GGCC | 5 cut(s) | 349, 708, 1248, 1473, 1755 |
| BsoBI | CYCGRG | 1 cut(s) | 1789 |
| Bsp119I | TTCGAA | 1 cut(s) | 1665 |
| Bsp120I | GGGCCC | 1 cut(s) | 347 |
| Bsp1286I | GDGCHC | 5 cut(s) | 351, 429, 733, 1196, 1651 |
| Bsp1407I | TGTACA | 1 cut(s) | 1428 |
| Bsp143I | GATC | 5 cut(s) | 108, 154, 763, 1637, 1845 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 140 |
| BspACI | CCGC | 1 cut(s) | 1866 |
| BspANI | GGCC | 5 cut(s) | 349, 708, 1248, 1473, 1755 |
| BspCNI | CTCAG | 4 cut(s) | 132, 405, 586, 1452 |
| BspHI | TCATGA | 1 cut(s) | 1689 |
| BspLI | GGNNCC | 2 cut(s) | 349, 1756 |
| BspMI | ACCTGC | 3 cut(s) | 239, 1012, 1816 |
| BspPI | GGATC | 3 cut(s) | 149, 1645, 1853 |
| BspT104I | TTCGAA | 1 cut(s) | 1665 |
| BsrDI | GCAATG | 5 cut(s) | 47, 494, 695, 1533, 1736 |
| BsrFI | RCCGGY | 1 cut(s) | 221 |
| BsrGI | TGTACA | 1 cut(s) | 1428 |
| BsrI | ACTGG | 6 cut(s) | 125, 481, 565, 637, 925, 1299 |
| BssAI | RCCGGY | 1 cut(s) | 221 |
| BssECI | CCNNGG | 7 cut(s) | 284, 285, 973, 1177, 1373, 1789, 1813 |
| BssMI | GATC | 5 cut(s) | 108, 154, 763, 1637, 1845 |
| BssNI | GRCGYC | 1 cut(s) | 1578 |
| BssT1I | CCWWGG | 2 cut(s) | 973, 1177 |
| Bst2UI | CCWGG | 3 cut(s) | 286, 896, 1923 |
| Bst4CI | ACNGT | 7 cut(s) | 218, 372, 955, 963, 1428, 1687, 1814 |
| Bst6I | CTCTTC | 1 cut(s) | 632 |
| BstACI | GRCGYC | 1 cut(s) | 1578 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 231, 1728 |
| BstAUI | TGTACA | 1 cut(s) | 1428 |
| BstBAI | YACGTR | 1 cut(s) | 203 |
| BstBI | TTCGAA | 1 cut(s) | 1665 |
| BstC8I | GCNNGC | 5 cut(s) | 223, 582, 1387, 1714, 1798 |
| BstDSI | CCRYGG | 1 cut(s) | 1813 |
| BstF5I | GGATG | 7 cut(s) | 182, 351, 1259, 1617, 1695, 1862, 1918 |
| BstHHI | GCGC | 1 cut(s) | 1569 |
| BstKTI | GATC | 5 cut(s) | 111, 157, 766, 1640, 1848 |
| BstMAI | GTCTC | 2 cut(s) | 972, 1048 |
| BstMBI | GATC | 5 cut(s) | 108, 154, 763, 1637, 1845 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 71, 179, 231, 298, 505, 1523, 1728, 1752 |
| BstNI | CCWGG | 3 cut(s) | 286, 896, 1923 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 373 |
| BstSCI | CCNGG | 5 cut(s) | 284, 894, 1788, 1789, 1921 |
| BstSLI | GKGCMC | 3 cut(s) | 351, 429, 1196 |
| BstV1I | GCAGC | 8 cut(s) | 18, 21, 64, 237, 1288, 1350, 1715, 1874 |
| BstV2I | GAAGAC | 1 cut(s) | 1209 |
| BstX2I | RGATCY | 1 cut(s) | 1845 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 488 |
| BstYI | RGATCY | 1 cut(s) | 1845 |
| Bsu36I | CCTNAGG | 1 cut(s) | 573 |
| BsuRI | GGCC | 5 cut(s) | 349, 708, 1248, 1473, 1755 |
| BtgI | CCRYGG | 1 cut(s) | 1813 |
| BtsCI | GGATG | 7 cut(s) | 182, 351, 1259, 1617, 1695, 1862, 1918 |
| BtsI | GCAGTG | 2 cut(s) | 556, 1338 |
| BtsIMutI | CAGTG | 8 cut(s) | 75, 118, 556, 630, 1292, 1338, 1457, 1893 |
| BveI | ACCTGC | 3 cut(s) | 239, 1012, 1816 |
| Cac8I | GCNNGC | 5 cut(s) | 223, 582, 1387, 1714, 1798 |
| CaiI | CAGNNNCTG | 3 cut(s) | 231, 422, 1868 |
| CciI | TCATGA | 1 cut(s) | 1689 |
| CfoI | GCGC | 1 cut(s) | 1569 |
| Cfr10I | RCCGGY | 1 cut(s) | 221 |
| Cfr13I | GGNCC | 8 cut(s) | 347, 348, 419, 491, 563, 707, 1370, 1754 |
| Cfr9I | CCCGGG | 1 cut(s) | 1789 |
| Csp6I | GTAC | 5 cut(s) | 338, 1116, 1378, 1429, 1465 |
| CviAII | CATG | 3 cut(s) | 177, 1690, 1705 |
| CviQI | GTAC | 5 cut(s) | 338, 1116, 1378, 1429, 1465 |
| DpnI | GATC | 5 cut(s) | 110, 156, 765, 1639, 1847 |
| DpnII | GATC | 5 cut(s) | 108, 154, 763, 1637, 1845 |
| Eam1104I | CTCTTC | 1 cut(s) | 632 |
| EarI | CTCTTC | 1 cut(s) | 632 |
| Eco130I | CCWWGG | 2 cut(s) | 973, 1177 |
| Eco24I | GRGCYC | 1 cut(s) | 351 |
| Eco47I | GGWCC | 4 cut(s) | 419, 491, 563, 1370 |
| Eco57I | CTGAAG | 2 cut(s) | 269, 323 |
| Eco72I | CACGTG | 1 cut(s) | 203 |
| Eco81I | CCTNAGG | 1 cut(s) | 573 |
| Eco88I | CYCGRG | 1 cut(s) | 1789 |
| EcoO109I | RGGNCCY | 1 cut(s) | 419 |
| EcoRI | GAATTC | 1 cut(s) | 647 |
| EcoRII | CCWGG | 3 cut(s) | 284, 894, 1921 |
| EcoT14I | CCWWGG | 2 cut(s) | 973, 1177 |
| EcoT38I | GRGCYC | 1 cut(s) | 351 |
| ErhI | CCWWGG | 2 cut(s) | 973, 1177 |
| FaeI | CATG | 3 cut(s) | 180, 1693, 1708 |
| FaqI | GGGAC | 3 cut(s) | 137, 706, 1772 |
| FatI | CATG | 3 cut(s) | 176, 1689, 1704 |
| FauNDI | CATATG | 2 cut(s) | 1750, 1929 |
| FblI | GTMKAC | 1 cut(s) | 1581 |
| Fnu4HI | GCNGC | 9 cut(s) | 32, 35, 53, 226, 1302, 1339, 1729, 1863, 1866 |
| FokI | GGATG | 7 cut(s) | 169, 338, 1246, 1604, 1682, 1869, 1925 |
| FriOI | GRGCYC | 1 cut(s) | 351 |
| Fsp4HI | GCNGC | 9 cut(s) | 32, 35, 53, 226, 1302, 1339, 1729, 1863, 1866 |
| FspBI | CTAG | 3 cut(s) | 743, 1037, 1415 |
| GlaI | GCGC | 1 cut(s) | 1568 |
| GluI | GCNGC | 9 cut(s) | 32, 35, 53, 226, 1302, 1339, 1729, 1863, 1866 |
| GsuI | CTGGAG | 1 cut(s) | 1306 |
| HaeIII | GGCC | 5 cut(s) | 349, 708, 1248, 1473, 1755 |
| HapII | CCGG | 4 cut(s) | 222, 849, 1263, 1790 |
| HhaI | GCGC | 1 cut(s) | 1569 |
| Hin1I | GRCGYC | 1 cut(s) | 1578 |
| Hin1II | CATG | 3 cut(s) | 180, 1693, 1708 |
| Hin6I | GCGC | 1 cut(s) | 1567 |
| HinP1I | GCGC | 1 cut(s) | 1567 |
| HincII | GTYRAC | 1 cut(s) | 918 |
| HindII | GTYRAC | 1 cut(s) | 918 |
| HindIII | AAGCTT | 1 cut(s) | 1025 |
| HinfI | GANTC | 7 cut(s) | 322, 779, 802, 1283, 1394, 1418, 1599 |
| HpaII | CCGG | 4 cut(s) | 222, 849, 1263, 1790 |
| HphI | GGTGA | 6 cut(s) | 232, 287, 748, 773, 782, 1604 |
| Hpy166II | GTNNAC | 5 cut(s) | 819, 918, 1139, 1194, 1582 |
| Hpy188I | TCNGA | 6 cut(s) | 333, 414, 619, 717, 1288, 1423 |
| Hpy188III | TCNNGA | 9 cut(s) | 489, 575, 751, 860, 1037, 1323, 1415, 1621, 1690 |
| Hpy8I | GTNNAC | 5 cut(s) | 819, 918, 1139, 1194, 1582 |
| Hpy99I | CGWCG | 3 cut(s) | 1280, 1283, 1580 |
| HpyAV | CCTTC | 6 cut(s) | 298, 683, 698, 1057, 1557, 1618 |
| HpyCH4III | ACNGT | 7 cut(s) | 218, 372, 955, 963, 1428, 1687, 1814 |
| HpyCH4IV | ACGT | 3 cut(s) | 202, 1578, 1674 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 71, 179, 231, 298, 505, 1523, 1728, 1752 |
| HpySE526I | ACGT | 3 cut(s) | 202, 1578, 1674 |
| Hsp92I | GRCGYC | 1 cut(s) | 1578 |
| Hsp92II | CATG | 3 cut(s) | 180, 1693, 1708 |
| HspAI | GCGC | 1 cut(s) | 1567 |
| KroI | GCCGGC | 1 cut(s) | 221 |
| KroNI | GCCGGC | 1 cut(s) | 223 |
| Kzo9I | GATC | 5 cut(s) | 108, 154, 763, 1637, 1845 |
| LmnI | GCTCC | 6 cut(s) | 289, 505, 532, 577, 1298, 1325 |
| Lsp1109I | GCAGC | 8 cut(s) | 18, 21, 64, 237, 1288, 1350, 1715, 1874 |
| LweI | GCATC | 5 cut(s) | 191, 623, 1174, 1268, 1906 |
| MaeI | CTAG | 3 cut(s) | 743, 1037, 1415 |
| MaeII | ACGT | 3 cut(s) | 202, 1578, 1674 |
| MaeIII | GTNAC | 4 cut(s) | 212, 556, 719, 957 |
| MalI | GATC | 5 cut(s) | 110, 156, 765, 1639, 1847 |
| MboI | GATC | 5 cut(s) | 108, 154, 763, 1637, 1845 |
| MboII | GAAGA | 8 cut(s) | 262, 619, 774, 785, 788, 1209, 1544, 1845 |
| MflI | RGATCY | 1 cut(s) | 1845 |
| MhlI | GDGCHC | 5 cut(s) | 351, 429, 733, 1196, 1651 |
| MlyI | GAGTC | 2 cut(s) | 1427, 1608 |
| MmeI | TCCRAC | 1 cut(s) | 1704 |
| MroNI | GCCGGC | 1 cut(s) | 221 |
| MseI | TTAA | 4 cut(s) | 518, 590, 600, 1230 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1688, 1855 |
| MspA1I | CMGCKG | 2 cut(s) | 139, 1868 |
| MspI | CCGG | 4 cut(s) | 222, 849, 1263, 1790 |
| MspR9I | CCNGG | 5 cut(s) | 286, 896, 1790, 1791, 1923 |
| Mva1269I | GAATGC | 2 cut(s) | 162, 1731 |
| MvaI | CCWGG | 3 cut(s) | 286, 896, 1923 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 71, 179, 231, 298, 505, 1523, 1728, 1752 |
| NaeI | GCCGGC | 1 cut(s) | 223 |
| NciI | CCSGG | 2 cut(s) | 1790, 1791 |
| NdeI | CATATG | 2 cut(s) | 1750, 1929 |
| NdeII | GATC | 5 cut(s) | 108, 154, 763, 1637, 1845 |
| NgoMIV | GCCGGC | 1 cut(s) | 221 |
| NlaIII | CATG | 3 cut(s) | 180, 1693, 1708 |
| NlaIV | GGNNCC | 2 cut(s) | 349, 1756 |
| NmuCI | GTSAC | 2 cut(s) | 212, 556 |
| NspV | TTCGAA | 1 cut(s) | 1665 |
| PagI | TCATGA | 1 cut(s) | 1689 |
| PaqCI | CACCTGC | 2 cut(s) | 239, 1816 |
| PasI | CCCWGGG | 1 cut(s) | 285 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1671 |
| PctI | GAATGC | 2 cut(s) | 162, 1731 |
| PdiI | GCCGGC | 1 cut(s) | 223 |
| PfeI | GAWTC | 5 cut(s) | 322, 779, 802, 1283, 1394 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 437 |
| PkrI | GCNGC | 9 cut(s) | 33, 36, 54, 227, 1303, 1340, 1730, 1864, 1867 |
| PleI | GAGTC | 2 cut(s) | 1426, 1607 |
| PmaCI | CACGTG | 1 cut(s) | 203 |
| PmlI | CACGTG | 1 cut(s) | 203 |
| PpsI | GAGTC | 2 cut(s) | 1426, 1607 |
| Ppu21I | YACGTR | 1 cut(s) | 203 |
| PpuMI | RGGWCCY | 1 cut(s) | 419 |
| PshAI | GACNNNNGTC | 1 cut(s) | 373 |
| PsiI | TTATAA | 1 cut(s) | 1655 |
| Psp1406I | AACGTT | 1 cut(s) | 1674 |
| Psp5II | RGGWCCY | 1 cut(s) | 419 |
| Psp6I | CCWGG | 3 cut(s) | 284, 894, 1921 |
| PspCI | CACGTG | 1 cut(s) | 203 |
| PspGI | CCWGG | 3 cut(s) | 284, 894, 1921 |
| PspN4I | GGNNCC | 2 cut(s) | 349, 1756 |
| PspOMI | GGGCCC | 1 cut(s) | 347 |
| PspPI | GGNCC | 8 cut(s) | 347, 348, 419, 491, 563, 707, 1370, 1754 |
| PspPPI | RGGWCCY | 1 cut(s) | 419 |
| PstNI | CAGNNNCTG | 3 cut(s) | 231, 422, 1868 |
| PsuI | RGATCY | 1 cut(s) | 1845 |
| PvuII | CAGCTG | 1 cut(s) | 139 |
| RsaI | GTAC | 5 cut(s) | 339, 1117, 1379, 1430, 1466 |
| RsaNI | GTAC | 5 cut(s) | 338, 1116, 1378, 1429, 1465 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1688, 1855 |
| SaqAI | TTAA | 4 cut(s) | 518, 590, 600, 1230 |
| SatI | GCNGC | 9 cut(s) | 32, 35, 53, 226, 1302, 1339, 1729, 1863, 1866 |
| Sau3AI | GATC | 5 cut(s) | 108, 154, 763, 1637, 1845 |
| Sau96I | GGNCC | 8 cut(s) | 347, 348, 419, 491, 563, 707, 1370, 1754 |
| SchI | GAGTC | 2 cut(s) | 1427, 1608 |
| ScrFI | CCNGG | 5 cut(s) | 286, 896, 1790, 1791, 1923 |
| SduI | GDGCHC | 5 cut(s) | 351, 429, 733, 1196, 1651 |
| SfaNI | GCATC | 5 cut(s) | 191, 623, 1174, 1268, 1906 |
| SfuI | TTCGAA | 1 cut(s) | 1665 |
| SinI | GGWCC | 4 cut(s) | 419, 491, 563, 1370 |
| SmaI | CCCGGG | 1 cut(s) | 1791 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1688, 1855 |
| SmlI | CTYRAG | 2 cut(s) | 751, 988 |
| SmoI | CTYRAG | 2 cut(s) | 751, 988 |
| SsiI | CCGC | 1 cut(s) | 1866 |
| SspMI | CTAG | 3 cut(s) | 743, 1037, 1415 |
| StyD4I | CCNGG | 5 cut(s) | 284, 894, 1788, 1789, 1921 |
| StyI | CCWWGG | 2 cut(s) | 973, 1177 |
| TaaI | ACNGT | 7 cut(s) | 218, 372, 955, 963, 1428, 1687, 1814 |
| TaiI | ACGT | 3 cut(s) | 205, 1581, 1677 |
| TaqI | TCGA | 4 cut(s) | 841, 1364, 1575, 1665 |
| TatI | WGTACW | 2 cut(s) | 337, 1428 |
| TauI | GCSGC | 1 cut(s) | 1868 |
| TfiI | GAWTC | 5 cut(s) | 322, 779, 802, 1283, 1394 |
| Tru1I | TTAA | 4 cut(s) | 518, 590, 600, 1230 |
| Tru9I | TTAA | 4 cut(s) | 518, 590, 600, 1230 |
| TscAI | CASTG | 8 cut(s) | 82, 125, 556, 637, 1299, 1338, 1464, 1893 |
| TseFI | GTSAC | 2 cut(s) | 212, 556 |
| TseI | GCWGC | 8 cut(s) | 31, 34, 52, 225, 1301, 1338, 1728, 1862 |
| Tsp45I | GTSAC | 2 cut(s) | 212, 556 |
| TspDTI | ATGAA | 7 cut(s) | 102, 1118, 1209, 1296, 1499, 1693, 1706 |
| TspMI | CCCGGG | 1 cut(s) | 1789 |
| TspRI | CASTG | 8 cut(s) | 82, 125, 556, 637, 1299, 1338, 1464, 1893 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 437 |
| VneI | GTGCAC | 1 cut(s) | 1192 |
| VpaK11BI | GGWCC | 4 cut(s) | 419, 491, 563, 1370 |
| XapI | RAATTY | 7 cut(s) | 13, 279, 647, 855, 947, 1066, 1078 |
| XbaI | TCTAGA | 2 cut(s) | 1036, 1414 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 174 |
| XmaI | CCCGGG | 1 cut(s) | 1789 |
| XmiI | GTMKAC | 1 cut(s) | 1581 |
| XspI | CTAG | 3 cut(s) | 743, 1037, 1415 |
| ZraI | GACGTC | 1 cut(s) | 1579 |