Rroxscaffold_7G00179010

AUX/IAA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0018383
Physical Location & Seq
Reverse (-)
18594997 .. 18599307
4311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00179010.1

Sequence Viewer

Length: 2073 bp
ATGCATCAACCACAAGGACATGATGACCTCAGCATGCAGGAAACCGAGACAGACATGAAACAAAACGTCAGCAAGCAGGAAACCGAGACAGTGAAACAAAGCTGCGCAAGGAAACTGTCAAAGCTGAAAAACAAATTGGATATTTCAAATTGGATATTGCTTGTTTCTGCACAAACAAGCACTTCTCCTGATGAAGTTACTGCTCTCAACAAGGTACTAGAACACTGGAGCTTGGTAAATCACTTGAATCTTACCATTGACCCCTGCACTGAAAATGCCACATGGGCATCTGGAACTGCGAATCCCCGTGTGGCTTGCGATTGTACAGGCAGCGCTTGCCATATTACTCACCTGAAGCTATATGCCTTGGACATAATTGGTGATCTACCAGGAGAACTATTTGAGCTAAAGCAGCTAATAGACTTGAATCTTGGTCAGAATGTATTAAGCGGGCGCATTCCTCCTGAAATCGGACTGTTATCCAACATGCAGTACCTTAGCTTAGGCGTAAACAATCTGTCAGGTCCGGTTCCATCAGAGCTTGGCAAGTTGACCAAGTTGGTTGAGCTAAGTTTTAGCTCAAACCAGTTCTCTGGACCATTGCCCTTGGACCTTGGAAAACTGACTTCCTTGCAGCAGTTGTACATAGACAGCAGTGGAGTGACTGGACCAATTCCACTGGAGCTTTCAAACTTAAAATCCCTTCAAACTTTCTGGGCATCTGATAATCTCTTCACCGGAAAACTCCCTCAGTTCTTAGGGACTCTTACAGAACTCACAGACTTGCGACTTGAAGGCACATTGCTTGACGGACCAATTCCAAGCAACTTTGGTGCTCTAACCAAACTAGACATCTTGAGAATTGGTGATCTTAGCAAGGAAGATTCTTCTCTCGATTTTTTGGAAAATCTAACAAGTTTGTCCATGCTGTCTTTGAGAAGCTGTCGAGTATCTGGAGAAATTCCTGAACAAATTGGAAAGTTTTCCAAGTTGCAATACCTAGATTTGAGATTCAACAAGTTGACTGGCTCAATACCAAACTCATTCCAAGATTTTACTGTGCTGCAATTTCTATATCTTGGAAACAATTACTTGAGTGGAGAACTACCTACAAGTATTGTAAGTCCACAGCTTATTGCACTAGATGTTTCCTTCAATCCAATATCTGGCAATCTACCTTCAAATTTCTCCACAGAAGGATTTTCACTGAATGTTCTTGGTACTTCCATCAATGCAAATGGTTTATCAGACAGTGGGGAACCTGGATTGTTGCATTGTCTCCAAGGAGACACCAAGTGCAGTAATAAACTGCCAGCTGTGTCTTCATTTTCTATTAAATGTGGAGGCACAAGCCAGAAATCTGTATCTGGGATCGAATACGATGATGATTCTGAAATCCTGGGAGCTGCTTTATCCTACAAAAGCTCTAGAAATCAATGGGCGGTGAGCAACACAGGGAACTTCCTTTTCAACTCAAACGGACCTCAATACACAGCAAACACAGATTCTCAAATCACGGAAACATTAGAGTCGGAGCTGTACAAGACAGCAAGAATCTCACCAACCTCACTTAGGTACTATGGCCTAGATTTGAAGAACGGAAACTATGTCGTTGAGCTTCACTTTGCAGAGTTGCAAATGGAGGAAACAAATTCCTGGAAAGGTCTCGGAAGGCGCTTGTTTGATGTCTACATTCAGGGTGAGAGAGTGGTCCAAGACTTGAACATTCAGAAGGAAGCAGGGGGATCCAAGAAGGCATTGATCAAAACATTCGAGACAAACGTGTCAAACACAATTATGGACATCCATTTCCTGTGGGCTGGAAAAGGCACTTGCTGCATTCCATATCAAGGCACATATGGACCTCTGGTCTCAGCAATCCATGTTTATCAAGTCTCGGATGCCGGGTCTTCTTCGAAAAGCGAGAGGAAGCATGTGGGAAGGATTGTGGGAGTGGCATTTGGATGTGCAGCTGTTATGATCATAATGTCATCAGTGTTCTACCTATGGTGGATTAAAGATGATGCTGAACCCAGACATGTGAGGATACATAGAGAGATGCGCAAGAAATGA

Protein Analysis

690

Amino Acids

75.72

Weight (kDa)

5.5

Isoelectric Point (pI)

36.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 109 - 218 2.9e-08 Leucine-rich repeat region
LRR_14 PF23598 225 - 312 2.3e-06 Leucine-rich repeat region
LRR_14 PF23598 286 - 364 3.6e-08 Leucine-rich repeat region
LRR_8 PF13855 306 - 365 4.1e-08 Leucine rich repeat
Malectin PF11721 443 - 627 2.8e-41 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018383)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g28980 FvH4_2g28980
prunus_persica Prupe.1G481600_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0297831
rosa_laevigata RLG00000011557
rosa_multiflora Rmu_sc0003137.1_g000013
rosa_roxburghii Rroxscaffold_7G00170160 Rroxscaffold_7G00179010
rosa_rugosa Rorug06G0275800
rosa_samantha Rh6CG400800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1783
Acc16I TGCGCA 2 cut(s) 106, 2063
AccB7I CCANNNNNTGG 1 cut(s) 1166
AccI GTMKAC 1 cut(s) 1689
AciI CCGC 2 cut(s) 450, 1442
AclWI GGATC 3 cut(s) 1379, 1740, 1753
AcsI RAATTY 3 cut(s) 960, 1183, 1651
AcuI CTGAAG 1 cut(s) 374
AdeI CACNNNGTG 1 cut(s) 1296
AfaI GTAC 7 cut(s) 216, 325, 494, 644, 1222, 1541, 1577
AfeI AGCGCT 1 cut(s) 334
AfiI CCNNNNNNNGG 4 cut(s) 470, 1166, 1572, 1850
AflIII ACRYGT 2 cut(s) 1782, 2038
AhdI GACNNNNNGTC 1 cut(s) 1868
AjnI CCWGG 4 cut(s) 388, 1261, 1398, 1655
AjuI GAANNNNNNNTTGG 2 cut(s) 119, 151
AloI GAACNNNNNNTCC 2 cut(s) 286, 318
Alw21I GWGCWC 1 cut(s) 838
Alw26I GTCTC 8 cut(s) 41, 80, 1281, 1283, 1670, 1769, 1876, 1900
AlwI GGATC 3 cut(s) 1379, 1740, 1753
Aor51HI AGCGCT 1 cut(s) 334
AoxI GGCC 1 cut(s) 1582
ApeKI GCWGC 8 cut(s) 102, 330, 412, 634, 1063, 1406, 1836, 1970
ApoI RAATTY 3 cut(s) 960, 1183, 1651
Asp700I GAANNNNTTC 1 cut(s) 982
AspLEI GCGC 5 cut(s) 107, 335, 456, 1677, 2064
AspS9I GGNCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
AsuC2I CCSGG 1 cut(s) 1906
AsuHPI GGTGA 7 cut(s) 341, 392, 727, 878, 1456, 1551, 1712
AsuII TTCGAA 1 cut(s) 1916
AvaII GGWCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
BamHI GGATCC 1 cut(s) 1745
BbsI GAAGAC 2 cut(s) 1314, 1902
Bbv12I GWGCWC 1 cut(s) 838
BbvCI CCTCAGC 1 cut(s) 29
BbvI GCAGC 8 cut(s) 89, 342, 424, 646, 1050, 1393, 1823, 1982
BccI CCATC 2 cut(s) 541, 1235
BciT130I CCWGG 4 cut(s) 390, 1263, 1400, 1657
BciVI GTATCC 1 cut(s) 2040
BclI TGATCA 2 cut(s) 1761, 1980
BcnI CCSGG 1 cut(s) 1906
BcoDI GTCTC 8 cut(s) 41, 80, 1281, 1283, 1670, 1769, 1876, 1900
BfaI CTAG 6 cut(s) 218, 848, 1001, 1142, 1428, 1586
BfoI RGCGCY 2 cut(s) 336, 1678
BfuI GTATCC 1 cut(s) 2040
BglI GCCNNNNNGGC 1 cut(s) 284
BisI GCNGC 8 cut(s) 103, 331, 413, 635, 1064, 1407, 1837, 1971
BlsI GCNGC 8 cut(s) 104, 332, 414, 636, 1065, 1408, 1838, 1972
Bme1390I CCNGG 5 cut(s) 390, 1263, 1400, 1657, 1906
Bme18I GGWCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
BmeRI GACNNNNNGTC 1 cut(s) 1868
BmgT120I GGNCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
BmiI GGNNCC 3 cut(s) 531, 1260, 1747
BmrFI CCNGG 5 cut(s) 390, 1263, 1400, 1657, 1906
BmsI GCATC 6 cut(s) 13, 296, 728, 1891, 2014, 2049
BpiI GAAGAC 2 cut(s) 1314, 1902
BpmI CTGGAG 3 cut(s) 247, 701, 975
Bpu10I CCTNAGC 3 cut(s) 29, 497, 502
Bpu14I TTCGAA 1 cut(s) 1916
BpuEI CTTGAG 2 cut(s) 877, 1114
BpuMI CCSGG 1 cut(s) 1906
BsaI GGTCTC 2 cut(s) 1670, 1876
BsaJI CCNNGG 5 cut(s) 366, 606, 613, 1282, 1399
BsaWI WCCGGW 2 cut(s) 526, 737
Bsc4I CCNNNNNNNGG 4 cut(s) 470, 1166, 1572, 1850
Bse1I ACTGG 5 cut(s) 230, 586, 670, 684, 1030
Bse3DI GCAATG 2 cut(s) 599, 800
BseBI CCWGG 4 cut(s) 390, 1263, 1400, 1657
BseDI CCNNGG 5 cut(s) 366, 606, 613, 1282, 1399
BseGI GGATG 3 cut(s) 1803, 1906, 1970
BseLI CCNNNNNNNGG 4 cut(s) 470, 1166, 1572, 1850
BseMI GCAATG 2 cut(s) 599, 800
BseMII CTCAG 3 cut(s) 43, 764, 1887
BseNI ACTGG 5 cut(s) 230, 586, 670, 684, 1030
BseXI GCAGC 8 cut(s) 89, 342, 424, 646, 1050, 1393, 1823, 1982
BsgI GTGCAG 4 cut(s) 153, 250, 1318, 1989
BshFI GGCC 1 cut(s) 1584
BsiHKAI GWGCWC 1 cut(s) 838
BsiSI CCGG 3 cut(s) 527, 738, 1905
BslFI GGGAC 1 cut(s) 775
BslI CCNNNNNNNGG 4 cut(s) 470, 1166, 1572, 1850
BsmAI GTCTC 8 cut(s) 41, 80, 1281, 1283, 1670, 1769, 1876, 1900
BsmFI GGGAC 1 cut(s) 775
BsmI GAATGC 2 cut(s) 456, 1839
BsnI GGCC 1 cut(s) 1584
Bso31I GGTCTC 2 cut(s) 1670, 1876
Bsp119I TTCGAA 1 cut(s) 1916
Bsp1286I GDGCHC 1 cut(s) 838
Bsp1407I TGTACA 3 cut(s) 323, 642, 1539
Bsp143I GATC 6 cut(s) 382, 868, 1371, 1745, 1761, 1980
BspACI CCGC 2 cut(s) 450, 1442
BspANI GGCC 1 cut(s) 1584
BspCNI CTCAG 3 cut(s) 42, 763, 1886
BspLI GGNNCC 3 cut(s) 531, 1260, 1747
BspPI GGATC 3 cut(s) 1379, 1740, 1753
BspT104I TTCGAA 1 cut(s) 1916
BspTNI GGTCTC 2 cut(s) 1670, 1876
BsrDI GCAATG 2 cut(s) 599, 800
BsrGI TGTACA 3 cut(s) 323, 642, 1539
BsrI ACTGG 5 cut(s) 230, 586, 670, 684, 1030
BssECI CCNNGG 5 cut(s) 366, 606, 613, 1282, 1399
BssMI GATC 6 cut(s) 382, 868, 1371, 1745, 1761, 1980
BssT1I CCWWGG 4 cut(s) 366, 606, 613, 1282
Bst2UI CCWGG 4 cut(s) 390, 1263, 1400, 1657
Bst4CI ACNGT 5 cut(s) 91, 117, 477, 1060, 1253
Bst6I CTCTTC 1 cut(s) 737
BstAPI GCANNNNNTGC 2 cut(s) 336, 1836
BstAUI TGTACA 3 cut(s) 323, 642, 1539
BstBI TTCGAA 1 cut(s) 1916
BstC8I GCNNGC 6 cut(s) 35, 74, 316, 337, 452, 1314
BstDEI CTNAG 9 cut(s) 29, 497, 502, 569, 750, 757, 872, 1571, 1873
BstENI CCTNNNNNAGG 1 cut(s) 1570
BstF5I GGATG 3 cut(s) 1803, 1906, 1970
BstH2I RGCGCY 2 cut(s) 336, 1678
BstHHI GCGC 5 cut(s) 107, 335, 456, 1677, 2064
BstKTI GATC 6 cut(s) 385, 871, 1374, 1748, 1764, 1983
BstMAI GTCTC 8 cut(s) 41, 80, 1281, 1283, 1670, 1769, 1876, 1900
BstMBI GATC 6 cut(s) 382, 868, 1371, 1745, 1761, 1980
BstMWI GCNNNNNNNGC 4 cut(s) 284, 336, 412, 1836
BstNI CCWGG 4 cut(s) 390, 1263, 1400, 1657
BstNSI RCATGY 4 cut(s) 37, 490, 1937, 2042
BstSCI CCNGG 5 cut(s) 388, 1261, 1398, 1655, 1904
BstV1I GCAGC 8 cut(s) 89, 342, 424, 646, 1050, 1393, 1823, 1982
BstV2I GAAGAC 2 cut(s) 1314, 1902
BstX2I RGATCY 1 cut(s) 1745
BstXI CCANNNNNNTGG 1 cut(s) 593
BstYI RGATCY 1 cut(s) 1745
BsuI GTATCC 1 cut(s) 2040
BsuRI GGCC 1 cut(s) 1584
BtsCI GGATG 3 cut(s) 1803, 1906, 1970
BtsI GCAGTG 1 cut(s) 661
BtsIMutI CAGTG 8 cut(s) 96, 223, 267, 661, 677, 1205, 1258, 2001
Cac8I GCNNGC 6 cut(s) 35, 74, 316, 337, 452, 1314
CfoI GCGC 5 cut(s) 107, 335, 456, 1677, 2064
Cfr13I GGNCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
Csp6I GTAC 7 cut(s) 215, 324, 493, 643, 1221, 1540, 1576
CviAII CATG 9 cut(s) 20, 34, 55, 282, 487, 925, 1883, 1934, 2039
CviQI GTAC 7 cut(s) 215, 324, 493, 643, 1221, 1540, 1576
DdeI CTNAG 9 cut(s) 29, 497, 502, 569, 750, 757, 872, 1571, 1873
DpnI GATC 6 cut(s) 384, 870, 1373, 1747, 1763, 1982
DpnII GATC 6 cut(s) 382, 868, 1371, 1745, 1761, 1980
DraIII CACNNNGTG 1 cut(s) 1296
DrdI GACNNNNNNGTC 1 cut(s) 1783
DriI GACNNNNNGTC 1 cut(s) 1868
DseDI GACNNNNNNGTC 1 cut(s) 1783
Eam1104I CTCTTC 1 cut(s) 737
Eam1105I GACNNNNNGTC 1 cut(s) 1868
EarI CTCTTC 1 cut(s) 737
Eco130I CCWWGG 4 cut(s) 366, 606, 613, 1282
Eco31I GGTCTC 2 cut(s) 1670, 1876
Eco47I GGWCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
Eco47III AGCGCT 1 cut(s) 334
Eco57I CTGAAG 1 cut(s) 374
EcoNI CCTNNNNNAGG 1 cut(s) 1570
EcoRII CCWGG 4 cut(s) 388, 1261, 1398, 1655
EcoT14I CCWWGG 4 cut(s) 366, 606, 613, 1282
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 4 cut(s) 366, 606, 613, 1282
FaeI CATG 9 cut(s) 23, 37, 58, 285, 490, 928, 1886, 1937, 2042
FaqI GGGAC 1 cut(s) 775
FatI CATG 9 cut(s) 19, 33, 54, 281, 486, 924, 1882, 1933, 2038
FauI CCCGC 1 cut(s) 443
FauNDI CATATG 1 cut(s) 1858
FbaI TGATCA 2 cut(s) 1761, 1980
FblI GTMKAC 1 cut(s) 1689
Fnu4HI GCNGC 8 cut(s) 103, 331, 413, 635, 1064, 1407, 1837, 1971
FokI GGATG 3 cut(s) 1790, 1913, 1977
Fsp4HI GCNGC 8 cut(s) 103, 331, 413, 635, 1064, 1407, 1837, 1971
FspBI CTAG 6 cut(s) 218, 848, 1001, 1142, 1428, 1586
FspI TGCGCA 2 cut(s) 106, 2063
GlaI GCGC 5 cut(s) 106, 334, 455, 1676, 2063
GluI GCNGC 8 cut(s) 103, 331, 413, 635, 1064, 1407, 1837, 1971
GsuI CTGGAG 3 cut(s) 247, 701, 975
HaeII RGCGCY 2 cut(s) 336, 1678
HaeIII GGCC 1 cut(s) 1584
HapII CCGG 3 cut(s) 527, 738, 1905
HhaI GCGC 5 cut(s) 107, 335, 456, 1677, 2064
Hin1II CATG 9 cut(s) 23, 37, 58, 285, 490, 928, 1886, 1937, 2042
Hin6I GCGC 5 cut(s) 105, 333, 454, 1675, 2062
HinP1I GCGC 5 cut(s) 105, 333, 454, 1675, 2062
HincII GTYRAC 2 cut(s) 552, 1023
HindII GTYRAC 2 cut(s) 552, 1023
HpaII CCGG 3 cut(s) 527, 738, 1905
HphI GGTGA 7 cut(s) 341, 392, 727, 878, 1456, 1551, 1712
Hpy166II GTNNAC 5 cut(s) 511, 552, 1023, 1127, 1690
Hpy8I GTNNAC 5 cut(s) 511, 552, 1023, 1127, 1690
HpyAV CCTTC 9 cut(s) 713, 788, 1162, 1188, 1190, 1665, 1726, 1747, 1935
HpyCH4III ACNGT 5 cut(s) 91, 117, 477, 1060, 1253
HpyCH4IV ACGT 2 cut(s) 66, 1782
HpyF10VI GCNNNNNNNGC 4 cut(s) 284, 336, 412, 1836
HpyF3I CTNAG 9 cut(s) 29, 497, 502, 569, 750, 757, 872, 1571, 1873
HpySE526I ACGT 2 cut(s) 66, 1782
Hsp92II CATG 9 cut(s) 23, 37, 58, 285, 490, 928, 1886, 1937, 2042
HspAI GCGC 5 cut(s) 105, 333, 454, 1675, 2062
Ksp22I TGATCA 2 cut(s) 1761, 1980
Kzo9I GATC 6 cut(s) 382, 868, 1371, 1745, 1761, 1980
LmnI GCTCC 4 cut(s) 228, 682, 1403, 1534
Lsp1109I GCAGC 8 cut(s) 89, 342, 424, 646, 1050, 1393, 1823, 1982
LweI GCATC 6 cut(s) 13, 296, 728, 1891, 2014, 2049
MaeI CTAG 6 cut(s) 218, 848, 1001, 1142, 1428, 1586
MaeII ACGT 2 cut(s) 66, 1782
MaeIII GTNAC 2 cut(s) 196, 661
MalI GATC 6 cut(s) 384, 870, 1373, 1747, 1763, 1982
MboI GATC 6 cut(s) 382, 868, 1371, 1745, 1761, 1980
MboII GAAGA 7 cut(s) 724, 879, 893, 1314, 1606, 1902, 1905
MflI RGATCY 1 cut(s) 1745
MhlI GDGCHC 1 cut(s) 838
MlyI GAGTC 2 cut(s) 757, 1538
MmeI TCCRAC 2 cut(s) 507, 1512
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 982
MseI TTAA 4 cut(s) 446, 695, 1335, 2016
MslI CAYNNNNRTG 2 cut(s) 1796, 1963
MspA1I CMGCKG 2 cut(s) 1316, 1973
MspI CCGG 3 cut(s) 527, 738, 1905
MspR9I CCNGG 5 cut(s) 390, 1263, 1400, 1657, 1906
Mva1269I GAATGC 2 cut(s) 456, 1839
MvaI CCWGG 4 cut(s) 390, 1263, 1400, 1657
MwoI GCNNNNNNNGC 4 cut(s) 284, 336, 412, 1836
NciI CCSGG 1 cut(s) 1906
NdeI CATATG 1 cut(s) 1858
NdeII GATC 6 cut(s) 382, 868, 1371, 1745, 1761, 1980
NlaIII CATG 9 cut(s) 23, 37, 58, 285, 490, 928, 1886, 1937, 2042
NlaIV GGNNCC 3 cut(s) 531, 1260, 1747
NmuCI GTSAC 1 cut(s) 661
NsbI TGCGCA 2 cut(s) 106, 2063
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 4 cut(s) 37, 490, 1937, 2042
NspV TTCGAA 1 cut(s) 1916
PaeI GCATGC 1 cut(s) 37
PciI ACATGT 1 cut(s) 2038
PcsI WCGNNNNNNNCGW 1 cut(s) 1779
PctI GAATGC 2 cut(s) 456, 1839
PdmI GAANNNNTTC 1 cut(s) 982
PfeI GAWTC 8 cut(s) 247, 301, 427, 884, 1011, 1388, 1505, 1554
PflMI CCANNNNNTGG 1 cut(s) 1166
PfoI TCCNGGA 1 cut(s) 1655
PkrI GCNGC 8 cut(s) 104, 332, 414, 636, 1065, 1408, 1838, 1972
PleI GAGTC 2 cut(s) 757, 1537
PpsI GAGTC 2 cut(s) 757, 1537
PscI ACATGT 1 cut(s) 2038
Psp6I CCWGG 4 cut(s) 388, 1261, 1398, 1655
PspGI CCWGG 4 cut(s) 388, 1261, 1398, 1655
PspN4I GGNNCC 3 cut(s) 531, 1260, 1747
PspPI GGNCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
PsuI RGATCY 1 cut(s) 1745
PvuII CAGCTG 2 cut(s) 1316, 1973
RsaI GTAC 7 cut(s) 216, 325, 494, 644, 1222, 1541, 1577
RsaNI GTAC 7 cut(s) 215, 324, 493, 643, 1221, 1540, 1576
RseI CAYNNNNRTG 2 cut(s) 1796, 1963
SaqAI TTAA 4 cut(s) 446, 695, 1335, 2016
SatI GCNGC 8 cut(s) 103, 331, 413, 635, 1064, 1407, 1837, 1971
Sau3AI GATC 6 cut(s) 382, 868, 1371, 1745, 1761, 1980
Sau96I GGNCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
SchI GAGTC 2 cut(s) 757, 1538
ScrFI CCNGG 5 cut(s) 390, 1263, 1400, 1657, 1906
SduI GDGCHC 1 cut(s) 838
SfaNI GCATC 6 cut(s) 13, 296, 728, 1891, 2014, 2049
SfuI TTCGAA 1 cut(s) 1916
SinI GGWCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
SmiMI CAYNNNNRTG 2 cut(s) 1796, 1963
SmlI CTYRAG 2 cut(s) 856, 1093
SmoI CTYRAG 2 cut(s) 856, 1093
SphI GCATGC 1 cut(s) 37
SsiI CCGC 2 cut(s) 450, 1442
SspMI CTAG 6 cut(s) 218, 848, 1001, 1142, 1428, 1586
StyD4I CCNGG 5 cut(s) 388, 1261, 1398, 1655, 1904
StyI CCWWGG 4 cut(s) 366, 606, 613, 1282
TaaI ACNGT 5 cut(s) 91, 117, 477, 1060, 1253
TaiI ACGT 2 cut(s) 69, 1785
TaqI TCGA 5 cut(s) 894, 946, 1374, 1773, 1916
TatI WGTACW 3 cut(s) 323, 642, 1539
TfiI GAWTC 8 cut(s) 247, 301, 427, 884, 1011, 1388, 1505, 1554
Tru1I TTAA 4 cut(s) 446, 695, 1335, 2016
Tru9I TTAA 4 cut(s) 446, 695, 1335, 2016
TscAI CASTG 8 cut(s) 96, 230, 274, 661, 684, 1212, 1258, 2001
TseFI GTSAC 1 cut(s) 661
TseI GCWGC 8 cut(s) 102, 330, 412, 634, 1063, 1406, 1836, 1970
Tsp45I GTSAC 1 cut(s) 661
TspDTI ATGAA 3 cut(s) 71, 207, 1314
TspGWI ACGGA 4 cut(s) 825, 1494, 1532, 1614
TspRI CASTG 8 cut(s) 96, 230, 274, 661, 684, 1212, 1258, 2001
Van91I CCANNNNNTGG 1 cut(s) 1166
VpaK11BI GGWCC 8 cut(s) 524, 596, 610, 668, 812, 1481, 1711, 1862
XagI CCTNNNNNAGG 1 cut(s) 1570
XapI RAATTY 3 cut(s) 960, 1183, 1651
XbaI TCTAGA 1 cut(s) 1427
XceI RCATGY 4 cut(s) 37, 490, 1937, 2042
XmiI GTMKAC 1 cut(s) 1689
XmnI GAANNNNTTC 1 cut(s) 982
XspI CTAG 6 cut(s) 218, 848, 1001, 1142, 1428, 1586
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.