RchiOBHm_Chr6g0297831

AUX/IAA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0018383
Physical Location & Seq
Forward (+)
59474653 .. 59478352
3700 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26734

Sequence Viewer

Length: 1695 bp
ATGCTCATTTCTTACTTTTCCTTCCCAGTTACTGCTCTCCACAAGGTAGTAGAACACTGGAACTTGGTAAATCACTTGAATCTTACCATTGACCCCTGCACTGAAAATGCAACATGGGCATCTGGAATTGCGAATCCCCGTGTGGCTTGCGATTGTACAGGCAGCACGTGCCATATTACTCACCTGAAGATATATGCCTTGGACATAATTGGTGATCTACCAGGAGAACTATTTGAGCTAAAGCAGCTAATAGACTTGAATCTTGGTCAGAATGTATTAAGCGGGCGCATTCCTCCTGAAATAGGACTGTTATCCAACATGCAGTATCTTAGCTTAGGCGTAAACAATCTGTCAGGTCCAGTTCCATCAGAGCTTGGCAACTTGGCCAAGTTGGTTGAGCTAAGTTTTAGCTCAAACCAGTTCTCTGGACCATTGCCCTTGGACCTTGGAAAACTGACCTCCTTGCAGCAGTTGTACATAGACAGCAGTGGAGTAACTGGACCAATTCCACAGGAGCTTTCAAACTTAAAATCCCTTCAAACTTTCTGGGCATCTGATAATCTCTTCACCGGAAAACTCCCACAGTTCTTAGGGACTCTTACAGAACTCATAGACTTGCGACTTGAAGGCACGTTGCTTGATGGACCAATTCCAAGCAATTTTGGTGCTCTAACCAAACTAGACATCTTGAGAATTGGTGATCTTAGCAAGGAAGATTCTTCTCTTGATTTTTTGGAAAATCTAACAAGTTTGTCCATGCTGTCTTTGAGAAGTTGTCGAGTATCTGGAGAAATTCCTGAACAAATTGGAAAGTTTTCCAAGTTGCAATACCTAGATTTGAGATTCAACAAGTTGACTGGCTCAATACCAAACTCATTCCAAGATTTTACTGTGCTGCAATTTCTATATCTTGGAAACAATTACTTGAGTGGAGAACTACCTACAAGTATTGTAAGTCCACAGCTTATTGCACTCCAGAAATCTGTATCTGGGATCGAATACGATGATGATTCTGAAATCCTGGGAGCCGCTTCATCCTACAAAAGCTCTAGAAATCAATGGGCGGTGAGCAACACAGGGAACTTCCTTTTCAACTCAAACGGACCTCAATACATAGAAAACACAGATTCTCAAATCACGGAAACATTAGAGTCGGAGCTGTACAAGACAGCAAGAATCTCACCAACCTCACTTAGGTACTATGGCCTAGATTTGAAGAACGGAAAATATGCCGTTGTGCTTCACTTTGCAGAGTTGCAAATGGAGGAAACAAATTCCTGGAAAGGTCTCGGAAGGCGCTTGTTTGATGTCTACATTCAGGGTGAGAGAGTGGTCCAAGACTTGAACATTCAGAAGGAAGCAGGGGGATCCAAGAAGGCATTGATCAAAACATTCGAGACAAACGTGTCAAACACAGTTATGGACATCCATTTCCTGTGGGCTGGAAAAGGCACTTGCTGCATTCCATATCAAGGCACATATGGACCTCTGATCTCAGCAATCCATGTTTATCAAGTCTCGGATGCCGCGTCTTCTTCGAAAAGCGAGAGGAAGCGTGTGGGAAGGATTGTGGGAGTGTCATTTGGATGTGCAGCTGTTGTGATCATAATGTCATCAGTGTTCTACCTATGGTGGATTAAAGATGATGCTGAACCCAGACATGTGAGGATACATAGAGAGATGCGCAAGAAATGA

Protein Analysis

564

Amino Acids

62.45

Weight (kDa)

5.67

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 54 - 162 8e-08 Leucine-rich repeat region
LRR_14 PF23598 148 - 254 1e-08 Leucine-rich repeat region
LRR_14 PF23598 234 - 315 2.7e-08 Leucine-rich repeat region
LRR_8 PF13855 250 - 309 2.9e-08 Leucine rich repeat
Malectin PF11721 327 - 501 2.1e-38 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018383)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g28980 FvH4_2g28980
prunus_persica Prupe.1G481600_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0297831
rosa_laevigata RLG00000011557
rosa_multiflora Rmu_sc0003137.1_g000013
rosa_roxburghii Rroxscaffold_7G00170160 Rroxscaffold_7G00179010
rosa_rugosa Rorug06G0275800
rosa_samantha Rh6CG400800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1405
Acc16I TGCGCA 1 cut(s) 1685
AccI GTMKAC 1 cut(s) 1311
AccII CGCG 1 cut(s) 1529
AciI CCGC 4 cut(s) 282, 1029, 1064, 1527
AclWI GGATC 3 cut(s) 1001, 1362, 1375
AcoI YGGCCR 1 cut(s) 384
AcsI RAATTY 2 cut(s) 792, 1273
AcuI CTGAAG 1 cut(s) 206
AcvI CACGTG 1 cut(s) 168
AfaI GTAC 4 cut(s) 157, 476, 1163, 1199
AfiI CCNNNNNNNGG 3 cut(s) 302, 1194, 1472
AflIII ACRYGT 2 cut(s) 1404, 1660
AgsI TTSAA 9 cut(s) 79, 259, 522, 539, 626, 847, 1093, 1216, 1345
AjnI CCWGG 3 cut(s) 220, 1020, 1277
Alw21I GWGCWC 1 cut(s) 670
Alw26I GTCTC 3 cut(s) 1292, 1391, 1522
AlwI GGATC 3 cut(s) 1001, 1362, 1375
AlwNI CAGNNNCTG 1 cut(s) 32
AoxI GGCC 2 cut(s) 384, 1204
ApeKI GCWGC 6 cut(s) 162, 244, 466, 895, 1458, 1592
ApoI RAATTY 2 cut(s) 792, 1273
Asp700I GAANNNNTTC 1 cut(s) 814
AspLEI GCGC 3 cut(s) 288, 1299, 1686
AspS9I GGNCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
AsuHPI GGTGA 7 cut(s) 173, 224, 559, 710, 1078, 1173, 1334
AsuII TTCGAA 1 cut(s) 1538
AvaII GGWCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
BalI TGGCCA 1 cut(s) 386
BamHI GGATCC 1 cut(s) 1367
BbrPI CACGTG 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 1524
Bbv12I GWGCWC 1 cut(s) 670
BbvI GCAGC 6 cut(s) 174, 256, 478, 882, 1445, 1604
BccI CCATC 2 cut(s) 373, 635
BceAI ACGGC 1 cut(s) 1217
BciT130I CCWGG 3 cut(s) 222, 1022, 1279
BciVI GTATCC 1 cut(s) 1662
BclI TGATCA 2 cut(s) 1383, 1602
BcoDI GTCTC 3 cut(s) 1292, 1391, 1522
BfaI CTAG 4 cut(s) 680, 833, 1050, 1208
BfoI RGCGCY 1 cut(s) 1300
BfuI GTATCC 1 cut(s) 1662
BisI GCNGC 8 cut(s) 163, 245, 467, 896, 1029, 1459, 1527, 1593
BlsI GCNGC 8 cut(s) 164, 246, 468, 897, 1030, 1460, 1528, 1594
Bme1390I CCNGG 3 cut(s) 222, 1022, 1279
Bme18I GGWCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
BmgT120I GGNCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
BmiI GGNNCC 2 cut(s) 1027, 1369
BmrFI CCNGG 3 cut(s) 222, 1022, 1279
BmrI ACTGGG 1 cut(s) 20
BmsI GCATC 5 cut(s) 128, 560, 1513, 1636, 1671
BmuI ACTGGG 1 cut(s) 20
BpiI GAAGAC 1 cut(s) 1524
BpmI CTGGAG 2 cut(s) 807, 959
Bpu10I CCTNAGC 1 cut(s) 334
Bpu14I TTCGAA 1 cut(s) 1538
BpuEI CTTGAG 2 cut(s) 709, 946
BsaAI YACGTR 1 cut(s) 168
BsaI GGTCTC 1 cut(s) 1292
BsaJI CCNNGG 4 cut(s) 198, 438, 445, 1021
BsaWI WCCGGW 1 cut(s) 569
Bsc4I CCNNNNNNNGG 3 cut(s) 302, 1194, 1472
Bse1I ACTGG 6 cut(s) 26, 62, 359, 418, 502, 862
Bse3DI GCAATG 1 cut(s) 431
BseBI CCWGG 3 cut(s) 222, 1022, 1279
BseDI CCNNGG 4 cut(s) 198, 438, 445, 1021
BseGI GGATG 4 cut(s) 1034, 1425, 1528, 1592
BseLI CCNNNNNNNGG 3 cut(s) 302, 1194, 1472
BseMI GCAATG 1 cut(s) 431
BseMII CTCAG 1 cut(s) 1509
BseNI ACTGG 6 cut(s) 26, 62, 359, 418, 502, 862
BseXI GCAGC 6 cut(s) 174, 256, 478, 882, 1445, 1604
BsgI GTGCAG 2 cut(s) 82, 1611
Bsh1236I CGCG 1 cut(s) 1529
BshFI GGCC 2 cut(s) 386, 1206
BsiHKAI GWGCWC 1 cut(s) 670
BsiSI CCGG 1 cut(s) 570
BslFI GGGAC 1 cut(s) 607
BslI CCNNNNNNNGG 3 cut(s) 302, 1194, 1472
BsmAI GTCTC 3 cut(s) 1292, 1391, 1522
BsmFI GGGAC 1 cut(s) 607
BsmI GAATGC 2 cut(s) 288, 1461
BsnI GGCC 2 cut(s) 386, 1206
Bso31I GGTCTC 1 cut(s) 1292
Bsp119I TTCGAA 1 cut(s) 1538
Bsp1286I GDGCHC 1 cut(s) 670
Bsp1407I TGTACA 3 cut(s) 155, 474, 1161
Bsp143I GATC 7 cut(s) 214, 700, 993, 1367, 1383, 1491, 1602
BspACI CCGC 4 cut(s) 282, 1029, 1064, 1527
BspANI GGCC 2 cut(s) 386, 1206
BspCNI CTCAG 1 cut(s) 1508
BspFNI CGCG 1 cut(s) 1529
BspLI GGNNCC 2 cut(s) 1027, 1369
BspPI GGATC 3 cut(s) 1001, 1362, 1375
BspT104I TTCGAA 1 cut(s) 1538
BspTNI GGTCTC 1 cut(s) 1292
BsrDI GCAATG 1 cut(s) 431
BsrGI TGTACA 3 cut(s) 155, 474, 1161
BsrI ACTGG 6 cut(s) 26, 62, 359, 418, 502, 862
BssECI CCNNGG 4 cut(s) 198, 438, 445, 1021
BssMI GATC 7 cut(s) 214, 700, 993, 1367, 1383, 1491, 1602
BssT1I CCWWGG 3 cut(s) 198, 438, 445
Bst2UI CCWGG 3 cut(s) 222, 1022, 1279
Bst4CI ACNGT 4 cut(s) 309, 585, 892, 1417
Bst6I CTCTTC 1 cut(s) 569
BstAPI GCANNNNNTGC 2 cut(s) 168, 1458
BstAUI TGTACA 3 cut(s) 155, 474, 1161
BstBAI YACGTR 1 cut(s) 168
BstBI TTCGAA 1 cut(s) 1538
BstC8I GCNNGC 2 cut(s) 148, 284
BstDEI CTNAG 7 cut(s) 329, 334, 401, 589, 704, 1193, 1495
BstENI CCTNNNNNAGG 2 cut(s) 300, 1192
BstF5I GGATG 4 cut(s) 1034, 1425, 1528, 1592
BstFNI CGCG 1 cut(s) 1529
BstH2I RGCGCY 1 cut(s) 1300
BstHHI GCGC 3 cut(s) 288, 1299, 1686
BstKTI GATC 7 cut(s) 217, 703, 996, 1370, 1386, 1494, 1605
BstMAI GTCTC 3 cut(s) 1292, 1391, 1522
BstMBI GATC 7 cut(s) 214, 700, 993, 1367, 1383, 1491, 1602
BstMWI GCNNNNNNNGC 4 cut(s) 116, 168, 244, 1458
BstNI CCWGG 3 cut(s) 222, 1022, 1279
BstNSI RCATGY 2 cut(s) 322, 1664
BstSCI CCNGG 3 cut(s) 220, 1020, 1277
BstUI CGCG 1 cut(s) 1529
BstV1I GCAGC 6 cut(s) 174, 256, 478, 882, 1445, 1604
BstV2I GAAGAC 1 cut(s) 1524
BstX2I RGATCY 1 cut(s) 1367
BstXI CCANNNNNNTGG 1 cut(s) 425
BstYI RGATCY 1 cut(s) 1367
BsuI GTATCC 1 cut(s) 1662
BsuRI GGCC 2 cut(s) 386, 1206
BtsCI GGATG 4 cut(s) 1034, 1425, 1528, 1592
BtsI GCAGTG 1 cut(s) 493
BtsIMutI CAGTG 4 cut(s) 55, 99, 493, 1623
Cac8I GCNNGC 2 cut(s) 148, 284
CaiI CAGNNNCTG 1 cut(s) 32
CfoI GCGC 3 cut(s) 288, 1299, 1686
Cfr13I GGNCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
CseI GACGC 1 cut(s) 1518
Csp6I GTAC 4 cut(s) 156, 475, 1162, 1198
CviAII CATG 5 cut(s) 114, 319, 757, 1505, 1661
CviQI GTAC 4 cut(s) 156, 475, 1162, 1198
DdeI CTNAG 7 cut(s) 329, 334, 401, 589, 704, 1193, 1495
DpnI GATC 7 cut(s) 216, 702, 995, 1369, 1385, 1493, 1604
DpnII GATC 7 cut(s) 214, 700, 993, 1367, 1383, 1491, 1602
DrdI GACNNNNNNGTC 1 cut(s) 1405
DseDI GACNNNNNNGTC 1 cut(s) 1405
EaeI YGGCCR 1 cut(s) 384
Eam1104I CTCTTC 1 cut(s) 569
EarI CTCTTC 1 cut(s) 569
Eco130I CCWWGG 3 cut(s) 198, 438, 445
Eco31I GGTCTC 1 cut(s) 1292
Eco47I GGWCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
Eco57I CTGAAG 1 cut(s) 206
Eco72I CACGTG 1 cut(s) 168
EcoNI CCTNNNNNAGG 2 cut(s) 300, 1192
EcoRII CCWGG 3 cut(s) 220, 1020, 1277
EcoT14I CCWWGG 3 cut(s) 198, 438, 445
ErhI CCWWGG 3 cut(s) 198, 438, 445
FaeI CATG 5 cut(s) 117, 322, 760, 1508, 1664
FaqI GGGAC 1 cut(s) 607
FatI CATG 5 cut(s) 113, 318, 756, 1504, 1660
FauI CCCGC 1 cut(s) 275
FauNDI CATATG 1 cut(s) 1480
FbaI TGATCA 2 cut(s) 1383, 1602
FblI GTMKAC 1 cut(s) 1311
Fnu4HI GCNGC 8 cut(s) 163, 245, 467, 896, 1029, 1459, 1527, 1593
FokI GGATG 4 cut(s) 1021, 1412, 1535, 1599
Fsp4HI GCNGC 8 cut(s) 163, 245, 467, 896, 1029, 1459, 1527, 1593
FspBI CTAG 4 cut(s) 680, 833, 1050, 1208
FspI TGCGCA 1 cut(s) 1685
GlaI GCGC 3 cut(s) 287, 1298, 1685
GluI GCNGC 8 cut(s) 163, 245, 467, 896, 1029, 1459, 1527, 1593
GsuI CTGGAG 2 cut(s) 807, 959
HaeII RGCGCY 1 cut(s) 1300
HaeIII GGCC 2 cut(s) 386, 1206
HapII CCGG 1 cut(s) 570
HgaI GACGC 1 cut(s) 1518
HhaI GCGC 3 cut(s) 288, 1299, 1686
Hin1II CATG 5 cut(s) 117, 322, 760, 1508, 1664
Hin6I GCGC 3 cut(s) 286, 1297, 1684
HinP1I GCGC 3 cut(s) 286, 1297, 1684
HincII GTYRAC 1 cut(s) 855
HindII GTYRAC 1 cut(s) 855
HpaII CCGG 1 cut(s) 570
HphI GGTGA 7 cut(s) 173, 224, 559, 710, 1078, 1173, 1334
Hpy166II GTNNAC 4 cut(s) 343, 855, 959, 1312
Hpy188I TCNGA 9 cut(s) 270, 370, 556, 1015, 1156, 1292, 1353, 1491, 1522
Hpy8I GTNNAC 4 cut(s) 343, 855, 959, 1312
HpyAV CCTTC 7 cut(s) 31, 545, 620, 1287, 1348, 1369, 1557
HpyCH4III ACNGT 4 cut(s) 309, 585, 892, 1417
HpyCH4IV ACGT 3 cut(s) 167, 632, 1404
HpyF10VI GCNNNNNNNGC 4 cut(s) 116, 168, 244, 1458
HpyF3I CTNAG 7 cut(s) 329, 334, 401, 589, 704, 1193, 1495
HpySE526I ACGT 3 cut(s) 167, 632, 1404
Hsp92II CATG 5 cut(s) 117, 322, 760, 1508, 1664
HspAI GCGC 3 cut(s) 286, 1297, 1684
Ksp22I TGATCA 2 cut(s) 1383, 1602
Kzo9I GATC 7 cut(s) 214, 700, 993, 1367, 1383, 1491, 1602
LmnI GCTCC 3 cut(s) 514, 1025, 1156
Lsp1109I GCAGC 6 cut(s) 174, 256, 478, 882, 1445, 1604
LweI GCATC 5 cut(s) 128, 560, 1513, 1636, 1671
MaeI CTAG 4 cut(s) 680, 833, 1050, 1208
MaeII ACGT 3 cut(s) 167, 632, 1404
MaeIII GTNAC 2 cut(s) 28, 493
MalI GATC 7 cut(s) 216, 702, 995, 1369, 1385, 1493, 1604
MboI GATC 7 cut(s) 214, 700, 993, 1367, 1383, 1491, 1602
MboII GAAGA 7 cut(s) 199, 556, 711, 725, 1228, 1524, 1527
MflI RGATCY 1 cut(s) 1367
MhlI GDGCHC 1 cut(s) 670
MlsI TGGCCA 1 cut(s) 386
MluNI TGGCCA 1 cut(s) 386
MlyI GAGTC 2 cut(s) 589, 1160
MmeI TCCRAC 2 cut(s) 339, 1134
MnlI CCTC 8 cut(s) 303, 469, 1116, 1198, 1258, 1497, 1542, 1659
Mox20I TGGCCA 1 cut(s) 386
MroXI GAANNNNTTC 1 cut(s) 814
MscI TGGCCA 1 cut(s) 386
MseI TTAA 3 cut(s) 278, 527, 1638
MslI CAYNNNNRTG 2 cut(s) 1418, 1585
Msp20I TGGCCA 1 cut(s) 386
MspA1I CMGCKG 1 cut(s) 1595
MspI CCGG 1 cut(s) 570
MspR9I CCNGG 3 cut(s) 222, 1022, 1279
Mva1269I GAATGC 2 cut(s) 288, 1461
MvaI CCWGG 3 cut(s) 222, 1022, 1279
MvnI CGCG 1 cut(s) 1529
MwoI GCNNNNNNNGC 4 cut(s) 116, 168, 244, 1458
NdeI CATATG 1 cut(s) 1480
NdeII GATC 7 cut(s) 214, 700, 993, 1367, 1383, 1491, 1602
NlaIII CATG 5 cut(s) 117, 322, 760, 1508, 1664
NlaIV GGNNCC 2 cut(s) 1027, 1369
NsbI TGCGCA 1 cut(s) 1685
NspI RCATGY 2 cut(s) 322, 1664
NspV TTCGAA 1 cut(s) 1538
PciI ACATGT 1 cut(s) 1660
PcsI WCGNNNNNNNCGW 2 cut(s) 1401, 1526
PctI GAATGC 2 cut(s) 288, 1461
PdmI GAANNNNTTC 1 cut(s) 814
PfeI GAWTC 8 cut(s) 79, 133, 259, 716, 843, 1010, 1127, 1176
PfoI TCCNGGA 1 cut(s) 1277
PkrI GCNGC 8 cut(s) 164, 246, 468, 897, 1030, 1460, 1528, 1594
PleI GAGTC 2 cut(s) 589, 1159
PmaCI CACGTG 1 cut(s) 168
PmlI CACGTG 1 cut(s) 168
PpsI GAGTC 2 cut(s) 589, 1159
Ppu21I YACGTR 1 cut(s) 168
PscI ACATGT 1 cut(s) 1660
Psp6I CCWGG 3 cut(s) 220, 1020, 1277
PspCI CACGTG 1 cut(s) 168
PspGI CCWGG 3 cut(s) 220, 1020, 1277
PspN4I GGNNCC 2 cut(s) 1027, 1369
PspPI GGNCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
PstNI CAGNNNCTG 1 cut(s) 32
PsuI RGATCY 1 cut(s) 1367
PvuII CAGCTG 1 cut(s) 1595
RsaI GTAC 4 cut(s) 157, 476, 1163, 1199
RsaNI GTAC 4 cut(s) 156, 475, 1162, 1198
RseI CAYNNNNRTG 2 cut(s) 1418, 1585
SaqAI TTAA 3 cut(s) 278, 527, 1638
SatI GCNGC 8 cut(s) 163, 245, 467, 896, 1029, 1459, 1527, 1593
Sau3AI GATC 7 cut(s) 214, 700, 993, 1367, 1383, 1491, 1602
Sau96I GGNCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
SchI GAGTC 2 cut(s) 589, 1160
ScrFI CCNGG 3 cut(s) 222, 1022, 1279
SduI GDGCHC 1 cut(s) 670
SfaNI GCATC 5 cut(s) 128, 560, 1513, 1636, 1671
SfuI TTCGAA 1 cut(s) 1538
SinI GGWCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
SmiMI CAYNNNNRTG 2 cut(s) 1418, 1585
SmlI CTYRAG 2 cut(s) 688, 925
SmoI CTYRAG 2 cut(s) 688, 925
SsiI CCGC 4 cut(s) 282, 1029, 1064, 1527
SspMI CTAG 4 cut(s) 680, 833, 1050, 1208
StyD4I CCNGG 3 cut(s) 220, 1020, 1277
StyI CCWWGG 3 cut(s) 198, 438, 445
TaaI ACNGT 4 cut(s) 309, 585, 892, 1417
TaiI ACGT 3 cut(s) 170, 635, 1407
TaqI TCGA 4 cut(s) 778, 996, 1395, 1538
TatI WGTACW 3 cut(s) 155, 474, 1161
TauI GCSGC 2 cut(s) 1031, 1529
TfiI GAWTC 8 cut(s) 79, 133, 259, 716, 843, 1010, 1127, 1176
Tru1I TTAA 3 cut(s) 278, 527, 1638
Tru9I TTAA 3 cut(s) 278, 527, 1638
TscAI CASTG 4 cut(s) 62, 106, 493, 1623
TseI GCWGC 6 cut(s) 162, 244, 466, 895, 1458, 1592
TspDTI ATGAA 1 cut(s) 1023
TspGWI ACGGA 3 cut(s) 1116, 1154, 1236
TspRI CASTG 4 cut(s) 62, 106, 493, 1623
VpaK11BI GGWCC 8 cut(s) 356, 428, 442, 500, 644, 1103, 1333, 1484
XagI CCTNNNNNAGG 2 cut(s) 300, 1192
XapI RAATTY 2 cut(s) 792, 1273
XbaI TCTAGA 1 cut(s) 1049
XceI RCATGY 2 cut(s) 322, 1664
XmiI GTMKAC 1 cut(s) 1311
XmnI GAANNNNTTC 1 cut(s) 814
XspI CTAG 4 cut(s) 680, 833, 1050, 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.