Prupe.1G507400_v2.0.a1

Domain of unknown function (DUF4750)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
41870394 .. 41870777
384 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G507400.1

Sequence Viewer

Length: 267 bp
ATGGACTCATCGTCCTCTGAGATGTCTCTTTCTTACCGGGACTACCTAACCCTTCTCCTTCTGCGTCCTCTCTTCGCAATCGCAGTCGTTTTCTCGTTCATCTCCGTTGGTTGGTGGTTGGCCTGGAAGCTGGTTTTGGTTCACGTTCCTCTGGTGCAAGAGATTTTCGGGCTGCGGAAGAAGACCGTGAAGCCCAAACCCCAAACTGGTCGCTTTTCTAAAATTTACAGCACCATTGAAGCCCGCAATTCGGCTTCTAAATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

89

Amino Acids

10.13

Weight (kDa)

10.16

Isoelectric Point (pI)

42.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019621)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G36380
fragaria_vesca FvH4_5g38460
malus_domestica MD15G1359700.v1.1
prunus_persica Prupe.1G507400_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0240501
rosa_roxburghii Rroxscaffold_3G00219930
rosa_wichuraiana Rw7G041150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 175, 244
AcsI RAATTY 1 cut(s) 222
AfiI CCNNNNNNNGG 3 cut(s) 111, 206, 250
AgsI TTSAA 1 cut(s) 239
AhdI GACNNNNNGTC 1 cut(s) 10
AjnI CCWGG 1 cut(s) 122
AjuI GAANNNNNNNTTGG 2 cut(s) 119, 151
AluBI AGCT 1 cut(s) 130
AluI AGCT 1 cut(s) 130
Alw26I GTCTC 1 cut(s) 30
AoxI GGCC 1 cut(s) 120
ApeKI GCWGC 1 cut(s) 172
ApoI RAATTY 1 cut(s) 222
AsuC2I CCSGG 1 cut(s) 38
BbsI GAAGAC 1 cut(s) 188
BbvI GCAGC 1 cut(s) 159
BciT130I CCWGG 1 cut(s) 124
BcnI CCSGG 1 cut(s) 38
BcoDI GTCTC 1 cut(s) 30
BisI GCNGC 1 cut(s) 173
BlsI GCNGC 1 cut(s) 174
Bme1390I CCNGG 2 cut(s) 38, 124
BmeRI GACNNNNNGTC 1 cut(s) 10
BmrFI CCNGG 2 cut(s) 38, 124
BpiI GAAGAC 1 cut(s) 188
BpuMI CCSGG 1 cut(s) 38
Bsc4I CCNNNNNNNGG 3 cut(s) 111, 206, 250
Bse1I ACTGG 1 cut(s) 211
BseBI CCWGG 1 cut(s) 124
BseLI CCNNNNNNNGG 3 cut(s) 111, 206, 250
BseMII CTCAG 1 cut(s) 9
BseNI ACTGG 1 cut(s) 211
BseXI GCAGC 1 cut(s) 159
BshFI GGCC 1 cut(s) 122
BsiSI CCGG 1 cut(s) 37
BslFI GGGAC 1 cut(s) 53
BslI CCNNNNNNNGG 3 cut(s) 111, 206, 250
BsmAI GTCTC 1 cut(s) 30
BsmFI GGGAC 1 cut(s) 53
BsnI GGCC 1 cut(s) 122
BspACI CCGC 2 cut(s) 175, 244
BspANI GGCC 1 cut(s) 122
BspCNI CTCAG 1 cut(s) 10
BsrI ACTGG 1 cut(s) 211
Bst2UI CCWGG 1 cut(s) 124
Bst4CI ACNGT 1 cut(s) 187
Bst6I CTCTTC 1 cut(s) 77
BstC8I GCNNGC 1 cut(s) 244
BstDEI CTNAG 1 cut(s) 18
BstMAI GTCTC 1 cut(s) 30
BstNI CCWGG 1 cut(s) 124
BstSCI CCNGG 2 cut(s) 36, 122
BstV1I GCAGC 1 cut(s) 159
BstV2I GAAGAC 1 cut(s) 188
BsuRI GGCC 1 cut(s) 122
Cac8I GCNNGC 1 cut(s) 244
CseI GACGC 1 cut(s) 53
CviJI RGCY 6 cut(s) 122, 130, 172, 193, 242, 254
CviKI_1 RGCY 6 cut(s) 122, 130, 172, 193, 242, 254
DdeI CTNAG 1 cut(s) 18
DriI GACNNNNNGTC 1 cut(s) 10
Eam1104I CTCTTC 1 cut(s) 77
Eam1105I GACNNNNNGTC 1 cut(s) 10
EarI CTCTTC 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 122
FaqI GGGAC 1 cut(s) 53
FauI CCCGC 1 cut(s) 251
Fnu4HI GCNGC 1 cut(s) 173
Fsp4HI GCNGC 1 cut(s) 173
GluI GCNGC 1 cut(s) 173
HaeIII GGCC 1 cut(s) 122
HapII CCGG 1 cut(s) 37
HgaI GACGC 1 cut(s) 53
HinfI GANTC 1 cut(s) 5
HpaII CCGG 1 cut(s) 37
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 1 cut(s) 19
Hpy8I GTNNAC 1 cut(s) 142
HpyAV CCTTC 2 cut(s) 62, 68
HpyCH4III ACNGT 1 cut(s) 187
HpyCH4IV ACGT 1 cut(s) 144
HpyCH4V TGCA 1 cut(s) 157
HpyF3I CTNAG 1 cut(s) 18
HpySE526I ACGT 1 cut(s) 144
LpnPI CCDG 6 cut(s) 50, 109, 116, 136, 137, 192
Lsp1109I GCAGC 1 cut(s) 159
MaeII ACGT 1 cut(s) 144
MboII GAAGA 3 cut(s) 64, 190, 193
MluCI AATT 2 cut(s) 222, 247
MnlI CCTC 3 cut(s) 25, 78, 159
MspI CCGG 1 cut(s) 37
MspR9I CCNGG 2 cut(s) 38, 124
MvaI CCWGG 1 cut(s) 124
NciI CCSGG 1 cut(s) 38
PkrI GCNGC 1 cut(s) 174
Psp6I CCWGG 1 cut(s) 122
PspGI CCWGG 1 cut(s) 122
SatI GCNGC 1 cut(s) 173
ScrFI CCNGG 2 cut(s) 38, 124
SetI ASST 3 cut(s) 48, 132, 147
Sse9I AATT 2 cut(s) 222, 247
SsiI CCGC 2 cut(s) 175, 244
StyD4I CCNGG 2 cut(s) 36, 122
TaaI ACNGT 1 cut(s) 187
TaiI ACGT 1 cut(s) 147
TasI AATT 2 cut(s) 222, 247
TseI GCWGC 1 cut(s) 172
TspDTI ATGAA 1 cut(s) 88
TspGWI ACGGA 1 cut(s) 94
XapI RAATTY 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.