Prupe.1G561900_v2.0.a1

Protein BYPASS1-related

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0011567
Physical Location & Seq
Forward (+)
45899271 .. 45901555
2285 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G561900.3

Sequence Viewer

Length: 1263 bp
ATGTTGGCAATGTTCATGTTTTTGGAATATCCTGAGGCCTTTGTTGTTGGAATCTTGTGGGTTGTGACCATGCCTTCTACGCACAATCCGGGTTCTTCTTCACCTTTGACTTCATTTGGTCGCTCGATTTGGAGTCGGCGAGAACCGTTTCATTCCATTGAAGCTGATCATGAGTCCAGTGAACAGGAATTAGAGCTGCAATCATTTCAAAAACTTGTTGTAGATCTATTTCATGACTTGTCAGCTGTTAGTGCTGATGAATTGCTCTCTATTGCGTGGATTCGGAAACTTTTGGATGTTTTTGTTTGTTGCCTAGACGAATTCAGGGTTCTCTTGTTGAAAAACAAGGCACAGGTTTCTAAACCTCCCTTGGACCATTGGGCTGATGAATACTTAGATAGGAGCTTGAAGGCACTTGACATTTGCAATGCCACTTGTGATGGGATTGAGAAGATTCGTACATGGCATAAGCATTTGGAGATTGTAATGTGTGCCTTAGAATCTCGAAAGAGGGCATTTTCTGAGGGCCAATTCCGTCGAGCAAGAAAGGCTTTGATGGATTTGACACTTGAAATGCTTGATGAGAGAGACTCTGGGTCTGTGTTTTCTCACCGGAACTGGTCTTTTGGGCGAAATAACCCAAGAAAGGATGCTCGTCGTCGTCAACACTCATCTGGGAACTCATCTGGGCATTCCCGCTCTCACTCATGGAGCATATCCAATTCTTGGTCTGCAGCTAAGCAGCTCCAATCAATTGCAAACAACTTGATAGCACCTCGTGGGAATGAGATTATTGCAACCAATGGGCTTGCAGGCTCTGTTTACACAATGAGTTCTGTGCTCACTTTTGTTTTGTCGGCTCTTGTGGCTGCAATTCCTTGTCAGGATCGAGGTCTTGGTACGCATTTTTCAATTCCACAGCAGTACTCCTGGGGTATCCCATTAATCTCACTTCACGAACGGATAATAGAGGAATCAAAGAAGCGAGAACGCCAGAACTCTAATGGATTGCTGAGGGAGATTTATCATGTTGAGAGATGTGCACGCCACATGACAGACTTGGTCGATGTGGTTCAGTTTCCATTGACAGAGGAACAGAAAGTGGAAGTTGAACAAGAACTGCAGGAGTTAGCATCGATTTGCGAAAAATTTAAGAATGGACTGGATCCTCTGGAACGACAAATCAGGGAAGTATTCCGTAGGATTATGAATTGCAGAACCGAGGGTCTTGAAATTTTGAGTAGGGCAAACAATCTGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BPS1

Protein Analysis

421

Amino Acids

48.08

Weight (kDa)

6.45

Isoelectric Point (pI)

48.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 726
AccBSI CCGCTC 1 cut(s) 699
AciI CCGC 1 cut(s) 697
AclWI GGATC 3 cut(s) 894, 1160, 1173
AcsI RAATTY 3 cut(s) 320, 1148, 1233
AdeI CACNNNGTG 1 cut(s) 779
AfaI GTAC 3 cut(s) 460, 901, 926
AfiI CCNNNNNNNGG 2 cut(s) 646, 726
AgsI TTSAA 8 cut(s) 161, 209, 340, 409, 572, 912, 1112, 1232
AhdI GACNNNNNGTC 1 cut(s) 595
AjnI CCWGG 1 cut(s) 929
AluBI AGCT 6 cut(s) 164, 196, 245, 405, 737, 745
AluI AGCT 6 cut(s) 164, 196, 245, 405, 737, 745
Alw21I GWGCWC 2 cut(s) 843, 1045
Alw26I GTCTC 1 cut(s) 582
Alw44I GTGCAC 1 cut(s) 1041
AlwI GGATC 3 cut(s) 894, 1160, 1173
AlwNI CAGNNNCTG 1 cut(s) 818
AoxI GGCC 2 cut(s) 36, 526
ApaLI GTGCAC 1 cut(s) 1041
ApeKI GCWGC 4 cut(s) 196, 734, 742, 869
ApoI RAATTY 3 cut(s) 320, 1148, 1233
AseI ATTAAT 1 cut(s) 944
Asp700I GAANNNNTTC 1 cut(s) 147
AspS9I GGNCC 2 cut(s) 373, 526
AsuC2I CCSGG 1 cut(s) 90
AsuHPI GGTGA 2 cut(s) 93, 602
AvaII GGWCC 1 cut(s) 373
AxyI CCTNAGG 1 cut(s) 33
BaeGI GKGCMC 1 cut(s) 1045
BamHI GGATCC 1 cut(s) 1165
BauI CACGAG 1 cut(s) 777
Bbv12I GWGCWC 2 cut(s) 843, 1045
BbvCI CCTCAGC 1 cut(s) 1013
BbvI GCAGC 4 cut(s) 183, 746, 754, 856
BccI CCATC 2 cut(s) 434, 550
BciT130I CCWGG 1 cut(s) 931
BciVI GTATCC 1 cut(s) 947
BclI TGATCA 1 cut(s) 166
BcnI CCSGG 1 cut(s) 90
BcoDI GTCTC 1 cut(s) 582
BfaI CTAG 1 cut(s) 314
BfmI CTRYAG 2 cut(s) 732, 1121
BfuI GTATCC 1 cut(s) 947
BglII AGATCT 1 cut(s) 223
BisI GCNGC 4 cut(s) 197, 735, 743, 870
BlpI GCTNAGC 1 cut(s) 738
BlsI GCNGC 4 cut(s) 198, 736, 744, 871
BmcAI AGTACT 1 cut(s) 926
Bme1390I CCNGG 2 cut(s) 90, 931
Bme18I GGWCC 1 cut(s) 373
BmeRI GACNNNNNGTC 1 cut(s) 595
BmgT120I GGNCC 2 cut(s) 373, 526
BmiI GGNNCC 1 cut(s) 1167
BmrFI CCNGG 2 cut(s) 90, 931
BmsI GCATC 2 cut(s) 640, 1142
BplI GAGNNNNNCTC 2 cut(s) 575, 607
Bpu10I CCTNAGC 1 cut(s) 1013
Bpu1102I GCTNAGC 1 cut(s) 738
BpuMI CCSGG 1 cut(s) 90
Bsa29I ATCGAT 1 cut(s) 1136
BsaJI CCNNGG 3 cut(s) 369, 930, 1221
BsaWI WCCGGW 1 cut(s) 612
Bsc4I CCNNNNNNNGG 2 cut(s) 646, 726
Bse1I ACTGG 3 cut(s) 177, 623, 1167
Bse21I CCTNAGG 1 cut(s) 33
Bse3DI GCAATG 2 cut(s) 15, 433
BseBI CCWGG 1 cut(s) 931
BseCI ATCGAT 1 cut(s) 1136
BseDI CCNNGG 3 cut(s) 369, 930, 1221
BseGI GGATG 2 cut(s) 301, 655
BseLI CCNNNNNNNGG 2 cut(s) 646, 726
BseMI GCAATG 2 cut(s) 15, 433
BseMII CTCAG 3 cut(s) 24, 513, 1004
BseNI ACTGG 3 cut(s) 177, 623, 1167
BseSI GKGCMC 1 cut(s) 1045
BseXI GCAGC 4 cut(s) 183, 746, 754, 856
BshFI GGCC 2 cut(s) 38, 528
BshVI ATCGAT 1 cut(s) 1136
BsiHKAI GWGCWC 2 cut(s) 843, 1045
BsiSI CCGG 2 cut(s) 89, 613
BslI CCNNNNNNNGG 2 cut(s) 646, 726
BsmAI GTCTC 1 cut(s) 582
BsmI GAATGC 1 cut(s) 691
BsnI GGCC 2 cut(s) 38, 528
Bsp1286I GDGCHC 2 cut(s) 843, 1045
Bsp143I GATC 4 cut(s) 166, 223, 886, 1165
Bsp1720I GCTNAGC 1 cut(s) 738
BspACI CCGC 1 cut(s) 697
BspANI GGCC 2 cut(s) 38, 528
BspCNI CTCAG 3 cut(s) 25, 514, 1005
BspDI ATCGAT 1 cut(s) 1136
BspHI TCATGA 2 cut(s) 169, 232
BspLI GGNNCC 1 cut(s) 1167
BspMAI CTGCAG 2 cut(s) 736, 1125
BspPI GGATC 3 cut(s) 894, 1160, 1173
BsrBI CCGCTC 1 cut(s) 699
BsrDI GCAATG 2 cut(s) 15, 433
BsrI ACTGG 3 cut(s) 177, 623, 1167
BssECI CCNNGG 3 cut(s) 369, 930, 1221
BssMI GATC 4 cut(s) 166, 223, 886, 1165
BssSI CACGAG 1 cut(s) 777
BssT1I CCWWGG 1 cut(s) 369
Bst2BI CACGAG 1 cut(s) 777
Bst2UI CCWGG 1 cut(s) 931
Bst4CI ACNGT 1 cut(s) 147
BstC8I GCNNGC 3 cut(s) 810, 814, 1045
BstDEI CTNAG 6 cut(s) 33, 394, 496, 522, 738, 1013
BstF5I GGATG 2 cut(s) 301, 655
BstKTI GATC 4 cut(s) 169, 226, 889, 1168
BstMAI GTCTC 1 cut(s) 582
BstMBI GATC 4 cut(s) 166, 223, 886, 1165
BstMWI GCNNNNNNNGC 4 cut(s) 79, 251, 548, 866
BstNI CCWGG 1 cut(s) 931
BstSCI CCNGG 2 cut(s) 88, 929
BstSFI CTRYAG 2 cut(s) 732, 1121
BstSLI GKGCMC 1 cut(s) 1045
BstV1I GCAGC 4 cut(s) 183, 746, 754, 856
BstX2I RGATCY 2 cut(s) 223, 1165
BstYI RGATCY 2 cut(s) 223, 1165
Bsu15I ATCGAT 1 cut(s) 1136
Bsu36I CCTNAGG 1 cut(s) 33
BsuI GTATCC 1 cut(s) 947
BsuRI GGCC 2 cut(s) 38, 528
BsuTUI ATCGAT 1 cut(s) 1136
BtsCI GGATG 2 cut(s) 301, 655
BtsIMutI CAGTG 1 cut(s) 184
Cac8I GCNNGC 3 cut(s) 810, 814, 1045
CaiI CAGNNNCTG 1 cut(s) 818
CciI TCATGA 2 cut(s) 169, 232
Cfr13I GGNCC 2 cut(s) 373, 526
ClaI ATCGAT 1 cut(s) 1136
Csp6I GTAC 3 cut(s) 459, 900, 925
CviAII CATG 8 cut(s) 16, 70, 170, 233, 462, 708, 1028, 1051
CviQI GTAC 3 cut(s) 459, 900, 925
DdeI CTNAG 6 cut(s) 33, 394, 496, 522, 738, 1013
DpnI GATC 4 cut(s) 168, 225, 888, 1167
DpnII GATC 4 cut(s) 166, 223, 886, 1165
DraIII CACNNNGTG 1 cut(s) 779
DriI GACNNNNNGTC 1 cut(s) 595
Eam1105I GACNNNNNGTC 1 cut(s) 595
Eco130I CCWWGG 1 cut(s) 369
Eco147I AGGCCT 1 cut(s) 38
Eco47I GGWCC 1 cut(s) 373
Eco81I CCTNAGG 1 cut(s) 33
EcoRI GAATTC 1 cut(s) 320
EcoRII CCWGG 1 cut(s) 929
EcoT14I CCWWGG 1 cut(s) 369
ErhI CCWWGG 1 cut(s) 369
FaeI CATG 8 cut(s) 19, 73, 173, 236, 465, 711, 1031, 1054
FalI AAGNNNNNCTT 2 cut(s) 535, 567
FatI CATG 8 cut(s) 15, 69, 169, 232, 461, 707, 1027, 1050
FauI CCCGC 1 cut(s) 704
FbaI TGATCA 1 cut(s) 166
Fnu4HI GCNGC 4 cut(s) 197, 735, 743, 870
FokI GGATG 2 cut(s) 308, 662
Fsp4HI GCNGC 4 cut(s) 197, 735, 743, 870
FspBI CTAG 1 cut(s) 314
GluI GCNGC 4 cut(s) 197, 735, 743, 870
HaeIII GGCC 2 cut(s) 38, 528
HapII CCGG 2 cut(s) 89, 613
Hin1II CATG 8 cut(s) 19, 73, 173, 236, 465, 711, 1031, 1054
HincII GTYRAC 1 cut(s) 665
HindII GTYRAC 1 cut(s) 665
HinfI GANTC 8 cut(s) 51, 133, 173, 280, 454, 500, 590, 974
HpaII CCGG 2 cut(s) 89, 613
HphI GGTGA 2 cut(s) 93, 602
Hpy166II GTNNAC 4 cut(s) 182, 665, 823, 1043
Hpy188I TCNGA 2 cut(s) 285, 523
Hpy188III TCNNGA 9 cut(s) 32, 170, 233, 504, 884, 956, 1172, 1229, 1256
Hpy8I GTNNAC 4 cut(s) 182, 665, 823, 1043
Hpy99I CGWCG 3 cut(s) 540, 660, 663
HpyAV CCTTC 2 cut(s) 84, 403
HpyCH4III ACNGT 1 cut(s) 147
HpyF10VI GCNNNNNNNGC 4 cut(s) 79, 251, 548, 866
HpyF3I CTNAG 6 cut(s) 33, 394, 496, 522, 738, 1013
Hsp92II CATG 8 cut(s) 19, 73, 173, 236, 465, 711, 1031, 1054
Ksp22I TGATCA 1 cut(s) 166
Kzo9I GATC 4 cut(s) 166, 223, 886, 1165
LmnI GCTCC 3 cut(s) 402, 711, 750
Lsp1109I GCAGC 4 cut(s) 183, 746, 754, 856
LweI GCATC 2 cut(s) 640, 1142
MaeI CTAG 1 cut(s) 314
MaeIII GTNAC 1 cut(s) 64
MalI GATC 4 cut(s) 168, 225, 888, 1167
MbiI CCGCTC 1 cut(s) 699
MboI GATC 4 cut(s) 166, 223, 886, 1165
MboII GAAGA 3 cut(s) 87, 90, 463
MfeI CAATTG 1 cut(s) 753
MflI RGATCY 2 cut(s) 223, 1165
MhlI GDGCHC 2 cut(s) 843, 1045
MlyI GAGTC 3 cut(s) 142, 182, 584
MmeI TCCRAC 1 cut(s) 28
MroXI GAANNNNTTC 1 cut(s) 147
MseI TTAA 2 cut(s) 944, 1152
MspA1I CMGCKG 1 cut(s) 245
MspI CCGG 2 cut(s) 89, 613
MspR9I CCNGG 2 cut(s) 90, 931
MunI CAATTG 1 cut(s) 753
Mva1269I GAATGC 1 cut(s) 691
MvaI CCWGG 1 cut(s) 931
MwoI GCNNNNNNNGC 4 cut(s) 79, 251, 548, 866
NciI CCSGG 1 cut(s) 90
NdeII GATC 4 cut(s) 166, 223, 886, 1165
NlaIII CATG 8 cut(s) 19, 73, 173, 236, 465, 711, 1031, 1054
NlaIV GGNNCC 1 cut(s) 1167
NmuCI GTSAC 1 cut(s) 64
PagI TCATGA 2 cut(s) 169, 232
PceI AGGCCT 1 cut(s) 38
PctI GAATGC 1 cut(s) 691
PdmI GAANNNNTTC 1 cut(s) 147
PfeI GAWTC 5 cut(s) 51, 280, 454, 500, 974
PflFI GACNNNGTC 1 cut(s) 1061
PflMI CCANNNNNTGG 1 cut(s) 726
PkrI GCNGC 4 cut(s) 198, 736, 744, 871
PleI GAGTC 3 cut(s) 141, 181, 584
PpsI GAGTC 3 cut(s) 141, 181, 584
PshBI ATTAAT 1 cut(s) 944
Psp6I CCWGG 1 cut(s) 929
PspGI CCWGG 1 cut(s) 929
PspN4I GGNNCC 1 cut(s) 1167
PspPI GGNCC 2 cut(s) 373, 526
PstI CTGCAG 2 cut(s) 736, 1125
PstNI CAGNNNCTG 1 cut(s) 818
PsuI RGATCY 2 cut(s) 223, 1165
PsyI GACNNNGTC 1 cut(s) 1061
PvuII CAGCTG 1 cut(s) 245
RsaI GTAC 3 cut(s) 460, 901, 926
RsaNI GTAC 3 cut(s) 459, 900, 925
SaqAI TTAA 2 cut(s) 944, 1152
SatI GCNGC 4 cut(s) 197, 735, 743, 870
Sau3AI GATC 4 cut(s) 166, 223, 886, 1165
Sau96I GGNCC 2 cut(s) 373, 526
ScaI AGTACT 1 cut(s) 926
SchI GAGTC 3 cut(s) 142, 182, 584
ScrFI CCNGG 2 cut(s) 90, 931
SduI GDGCHC 2 cut(s) 843, 1045
SfaNI GCATC 2 cut(s) 640, 1142
SfcI CTRYAG 2 cut(s) 732, 1121
SinI GGWCC 1 cut(s) 373
SseBI AGGCCT 1 cut(s) 38
SsiI CCGC 1 cut(s) 697
SspMI CTAG 1 cut(s) 314
StuI AGGCCT 1 cut(s) 38
StyD4I CCNGG 2 cut(s) 88, 929
StyI CCWWGG 1 cut(s) 369
TaaI ACNGT 1 cut(s) 147
TaqI TCGA 6 cut(s) 125, 505, 538, 889, 1065, 1136
TatI WGTACW 1 cut(s) 924
TfiI GAWTC 5 cut(s) 51, 280, 454, 500, 974
Tru1I TTAA 2 cut(s) 944, 1152
Tru9I TTAA 2 cut(s) 944, 1152
TscAI CASTG 1 cut(s) 184
TseFI GTSAC 1 cut(s) 64
TseI GCWGC 4 cut(s) 196, 734, 742, 869
Tsp45I GTSAC 1 cut(s) 64
TspDTI ATGAA 7 cut(s) 4, 102, 140, 221, 273, 402, 1223
TspGWI ACGGA 3 cut(s) 524, 976, 1187
TspRI CASTG 1 cut(s) 184
Tth111I GACNNNGTC 1 cut(s) 1061
Van91I CCANNNNNTGG 1 cut(s) 726
VneI GTGCAC 1 cut(s) 1041
VpaK11BI GGWCC 1 cut(s) 373
VspI ATTAAT 1 cut(s) 944
XapI RAATTY 3 cut(s) 320, 1148, 1233
XcmI CCANNNNNNNNNTGG 1 cut(s) 1001
XmnI GAANNNNTTC 1 cut(s) 147
XspI CTAG 1 cut(s) 314
ZrmI AGTACT 1 cut(s) 926
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.