Prupe.2G017200_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
1607656 .. 1607961
306 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G017200.1

Sequence Viewer

Length: 306 bp
TCCCTTCAAATTGAACCCAAAAGCAGAAGCAGCCCAAGAACAGATTCCATTCTTCTATCTTGCCAAGGCCGTGAGCCCGTAGAGAAAGATCAGAAGCAAGGAGATAAGCAGTCGTTGTTGCTGGGGCTTTTTGTTGGTTTTGAGAGGCTGGGGAAGAACTTGAAGGAGAATTTAAGTCCAAAGCAAAAGGGTGACTGGAAGGACTTGATGTTGATGAGCTTATCATTTGCTGTGTATGTTTACATCTCTCAAAGGATTGTCTGTGCTTACTGTGCTTGGATGTCCATGCCCAACCCTCCTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

102

Amino Acids

11.54

Weight (kDa)

9.1

Isoelectric Point (pI)

69.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015309)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 169
AgsI TTSAA 3 cut(s) 8, 14, 163
AjuI GAANNNNNNNTTGG 2 cut(s) 28, 60
AluBI AGCT 1 cut(s) 219
AluI AGCT 1 cut(s) 219
AoxI GGCC 1 cut(s) 67
ApeKI GCWGC 1 cut(s) 30
ApoI RAATTY 1 cut(s) 169
Asp700I GAANNNNTTC 1 cut(s) 43
AsuHPI GGTGA 1 cut(s) 203
BanII GRGCYC 1 cut(s) 78
BbvI GCAGC 1 cut(s) 42
BceAI ACGGC 1 cut(s) 54
BisI GCNGC 1 cut(s) 31
BlsI GCNGC 1 cut(s) 32
BsaJI CCNNGG 2 cut(s) 64, 299
Bse1I ACTGG 1 cut(s) 200
BseDI CCNNGG 2 cut(s) 64, 299
BseGI GGATG 1 cut(s) 285
BseNI ACTGG 1 cut(s) 200
BseXI GCAGC 1 cut(s) 42
BseYI CCCAGC 2 cut(s) 121, 148
BshFI GGCC 1 cut(s) 69
BsnI GGCC 1 cut(s) 69
Bsp1286I GDGCHC 1 cut(s) 78
Bsp143I GATC 1 cut(s) 88
BspANI GGCC 1 cut(s) 69
BsrI ACTGG 1 cut(s) 200
BssECI CCNNGG 2 cut(s) 64, 299
BssMI GATC 1 cut(s) 88
BssT1I CCWWGG 2 cut(s) 64, 299
Bst4CI ACNGT 1 cut(s) 272
BstF5I GGATG 1 cut(s) 285
BstKTI GATC 1 cut(s) 91
BstMBI GATC 1 cut(s) 88
BstMWI GCNNNNNNNGC 2 cut(s) 30, 272
BstV1I GCAGC 1 cut(s) 42
BsuRI GGCC 1 cut(s) 69
BtsCI GGATG 1 cut(s) 285
CviAII CATG 1 cut(s) 286
CviJI RGCY 6 cut(s) 33, 69, 76, 127, 148, 219
CviKI_1 RGCY 6 cut(s) 33, 69, 76, 127, 148, 219
DpnI GATC 1 cut(s) 90
DpnII GATC 1 cut(s) 88
Eco130I CCWWGG 2 cut(s) 64, 299
Eco24I GRGCYC 1 cut(s) 78
EcoT14I CCWWGG 2 cut(s) 64, 299
EcoT38I GRGCYC 1 cut(s) 78
ErhI CCWWGG 2 cut(s) 64, 299
FaeI CATG 1 cut(s) 289
FaiI YATR 2 cut(s) 237, 287
FatI CATG 1 cut(s) 285
Fnu4HI GCNGC 1 cut(s) 31
FokI GGATG 1 cut(s) 292
FriOI GRGCYC 1 cut(s) 78
Fsp4HI GCNGC 1 cut(s) 31
GluI GCNGC 1 cut(s) 31
GsaI CCCAGC 2 cut(s) 125, 152
HaeIII GGCC 1 cut(s) 69
Hin1II CATG 1 cut(s) 289
HinfI GANTC 1 cut(s) 44
HphI GGTGA 1 cut(s) 203
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 1 cut(s) 93
Hpy8I GTNNAC 1 cut(s) 241
HpyAV CCTTC 3 cut(s) 14, 157, 193
HpyCH4III ACNGT 1 cut(s) 272
HpyF10VI GCNNNNNNNGC 2 cut(s) 30, 272
Hsp92II CATG 1 cut(s) 289
Kzo9I GATC 1 cut(s) 88
LpnPI CCDG 3 cut(s) 107, 134, 181
Lsp1109I GCAGC 1 cut(s) 42
MaeIII GTNAC 1 cut(s) 191
MalI GATC 1 cut(s) 90
MboI GATC 1 cut(s) 88
MboII GAAGA 2 cut(s) 44, 166
MhlI GDGCHC 1 cut(s) 78
MluCI AATT 2 cut(s) 9, 169
MnlI CCTC 2 cut(s) 138, 306
MroXI GAANNNNTTC 1 cut(s) 43
MseI TTAA 1 cut(s) 173
MwoI GCNNNNNNNGC 2 cut(s) 30, 272
NdeII GATC 1 cut(s) 88
NlaIII CATG 1 cut(s) 289
NmuCI GTSAC 1 cut(s) 191
PdmI GAANNNNTTC 1 cut(s) 43
PfeI GAWTC 1 cut(s) 44
PkrI GCNGC 1 cut(s) 32
PspFI CCCAGC 2 cut(s) 121, 148
SaqAI TTAA 1 cut(s) 173
SatI GCNGC 1 cut(s) 31
Sau3AI GATC 1 cut(s) 88
SduI GDGCHC 1 cut(s) 78
SetI ASST 1 cut(s) 221
Sse9I AATT 2 cut(s) 9, 169
StyI CCWWGG 2 cut(s) 64, 299
TaaI ACNGT 1 cut(s) 272
TasI AATT 2 cut(s) 9, 169
TfiI GAWTC 1 cut(s) 44
Tru1I TTAA 1 cut(s) 173
Tru9I TTAA 1 cut(s) 173
TseFI GTSAC 1 cut(s) 191
TseI GCWGC 1 cut(s) 30
Tsp45I GTSAC 1 cut(s) 191
XapI RAATTY 1 cut(s) 169
XmnI GAANNNNTTC 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.