Rh7BG381400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
41237017 .. 41237469
453 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG381400.1

Sequence Viewer

Length: 453 bp
ATGGAGAAACCTATCTTGTTCAATTCCGTCCTCCAACCGCCCTACTTAACCACTCATCAAAACTTGATTTGTCTTCCATGGCTTTCGGCTGTTTCTGTAAGCCCTTCATTCCAAGTCAAAAACAGTTCCAATCAAATTGAACCCAGAAACAGAACCAGCTGCCCAAGAACTCATATTCTTCTGTCTAGTTGCCATGGCCGTGAGCCTATAGATACATCATCAAACCTACAAAAGAAGAAAGATGAGAAGCAAGAAAAACCGTCATTGTTGCGGTTGTTGGCTGATTTTGTGAATCTGGGGAAGAACTTGAAGGAGAACTTGAGCCCAAAACAAAAGGGTGACTGGAAGGATTTGATGTTGATGAGCTTATCGTTTGCTGTTTATGTGTATATCTCTCAAAAGCTTGTCTGTGCTTACTGTGCTTGGACATCCATGCCCAACCAAACTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

150

Amino Acids

17.15

Weight (kDa)

9.28

Isoelectric Point (pI)

53.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015309)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 38, 271
AcoI YGGCCR 1 cut(s) 196
AgsI TTSAA 3 cut(s) 22, 140, 310
AluBI AGCT 3 cut(s) 159, 366, 403
AluI AGCT 3 cut(s) 159, 366, 403
AoxI GGCC 1 cut(s) 196
ApeKI GCWGC 1 cut(s) 159
AsuHPI GGTGA 1 cut(s) 350
BanII GRGCYC 1 cut(s) 326
BbsI GAAGAC 1 cut(s) 65
BbvI GCAGC 1 cut(s) 146
BceAI ACGGC 1 cut(s) 183
BfaI CTAG 1 cut(s) 186
BfmI CTRYAG 1 cut(s) 207
BisI GCNGC 1 cut(s) 160
BlsI GCNGC 1 cut(s) 161
BpiI GAAGAC 1 cut(s) 65
BpuEI CTTGAG 1 cut(s) 340
BsaJI CCNNGG 2 cut(s) 77, 193
Bse1I ACTGG 1 cut(s) 347
BseDI CCNNGG 2 cut(s) 77, 193
BseGI GGATG 1 cut(s) 428
BseNI ACTGG 1 cut(s) 347
BseXI GCAGC 1 cut(s) 146
BshFI GGCC 1 cut(s) 198
BsnI GGCC 1 cut(s) 198
Bsp1286I GDGCHC 1 cut(s) 326
Bsp19I CCATGG 2 cut(s) 77, 193
BspACI CCGC 2 cut(s) 38, 271
BspANI GGCC 1 cut(s) 198
BsrI ACTGG 1 cut(s) 347
BssECI CCNNGG 2 cut(s) 77, 193
BssT1I CCWWGG 2 cut(s) 77, 193
Bst4CI ACNGT 3 cut(s) 125, 261, 419
BstDSI CCRYGG 2 cut(s) 77, 193
BstF5I GGATG 1 cut(s) 428
BstMWI GCNNNNNNNGC 1 cut(s) 419
BstSFI CTRYAG 1 cut(s) 207
BstV1I GCAGC 1 cut(s) 146
BstV2I GAAGAC 1 cut(s) 65
BsuRI GGCC 1 cut(s) 198
BtgI CCRYGG 2 cut(s) 77, 193
BtsCI GGATG 1 cut(s) 428
CviAII CATG 3 cut(s) 78, 194, 433
EaeI YGGCCR 1 cut(s) 196
Eco130I CCWWGG 2 cut(s) 77, 193
Eco24I GRGCYC 1 cut(s) 326
EcoT14I CCWWGG 2 cut(s) 77, 193
EcoT38I GRGCYC 1 cut(s) 326
ErhI CCWWGG 2 cut(s) 77, 193
FaeI CATG 3 cut(s) 81, 197, 436
FaiI YATR 7 cut(s) 79, 174, 195, 209, 384, 390, 434
FalI AAGNNNNNCTT 2 cut(s) 302, 334
FatI CATG 3 cut(s) 77, 193, 432
Fnu4HI GCNGC 1 cut(s) 160
FokI GGATG 1 cut(s) 415
FriOI GRGCYC 1 cut(s) 326
Fsp4HI GCNGC 1 cut(s) 160
FspBI CTAG 1 cut(s) 186
GluI GCNGC 1 cut(s) 160
HaeIII GGCC 1 cut(s) 198
Hin1II CATG 3 cut(s) 81, 197, 436
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 1 cut(s) 292
HphI GGTGA 1 cut(s) 350
HpyAV CCTTC 3 cut(s) 114, 304, 340
HpyCH4III ACNGT 3 cut(s) 125, 261, 419
HpyF10VI GCNNNNNNNGC 1 cut(s) 419
Hsp92II CATG 3 cut(s) 81, 197, 436
LpnPI CCDG 4 cut(s) 157, 169, 281, 328
Lsp1109I GCAGC 1 cut(s) 146
MaeI CTAG 1 cut(s) 186
MaeIII GTNAC 1 cut(s) 338
MboII GAAGA 4 cut(s) 65, 170, 247, 313
MhlI GDGCHC 1 cut(s) 326
MluCI AATT 2 cut(s) 22, 135
MmeI TCCRAC 1 cut(s) 58
MnlI CCTC 1 cut(s) 41
MseI TTAA 1 cut(s) 47
MslI CAYNNNNRTG 1 cut(s) 198
MspA1I CMGCKG 1 cut(s) 159
MwoI GCNNNNNNNGC 1 cut(s) 419
NcoI CCATGG 2 cut(s) 77, 193
NlaIII CATG 3 cut(s) 81, 197, 436
NmuCI GTSAC 1 cut(s) 338
PfeI GAWTC 1 cut(s) 292
PkrI GCNGC 1 cut(s) 161
PvuII CAGCTG 1 cut(s) 159
RseI CAYNNNNRTG 1 cut(s) 198
SaqAI TTAA 1 cut(s) 47
SatI GCNGC 1 cut(s) 160
SduI GDGCHC 1 cut(s) 326
SetI ASST 5 cut(s) 13, 161, 228, 368, 405
SfcI CTRYAG 1 cut(s) 207
SmiMI CAYNNNNRTG 1 cut(s) 198
SmlI CTYRAG 1 cut(s) 319
SmoI CTYRAG 1 cut(s) 319
Sse9I AATT 2 cut(s) 22, 135
SsiI CCGC 2 cut(s) 38, 271
SspMI CTAG 1 cut(s) 186
StyI CCWWGG 2 cut(s) 77, 193
TaaI ACNGT 3 cut(s) 125, 261, 419
TasI AATT 2 cut(s) 22, 135
TfiI GAWTC 1 cut(s) 292
Tru1I TTAA 1 cut(s) 47
Tru9I TTAA 1 cut(s) 47
TseFI GTSAC 1 cut(s) 338
TseI GCWGC 1 cut(s) 159
Tsp45I GTSAC 1 cut(s) 338
TspDTI ATGAA 1 cut(s) 96
TspGWI ACGGA 1 cut(s) 16
XspI CTAG 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.