RLG00000001585

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
17803186 .. 17803638
453 bp
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UTR
Exon/CDS
Intron
RLM00000001585

Sequence Viewer

Length: 453 bp
ATGGAGAAACCTATCTTGTTCAATTCCCTCCTCCAACCTCCCTACTTAACCACTCATCAAAACTTGATTTGTCTTCCATGGCTTTCTGCTGTTTCTGTAAGCCCTTCATTCCAAGTCAAAAACAGTTCCAATCAAATTGAACCCAGAAACAGAACCAGCTGCCCAAGAACTCATATTCTTCTGTCTAGTTGCCATGGACGTGAGCCTATAGATACATCATCAAACCTACAAAATAAGAAAGATGAGAAGCAAGAAAAACCGTCATTGTTGCGGTTGTTGGCTGATTTTGTGAATCTGGGGAAGAACTTGAAGGAGAACTTGAGCCCAAAACAAAAGGGTGACTGGAAGGATTTGATGTTGATGAGCTTATCGTTTGCTGTTTATGTGTATATCTCTCAAAAGCTTGTCTGTGCTTACTGTGCTTGGACATCCATGCCCAACCAAACTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

151

Amino Acids

17.15

Weight (kDa)

9.16

Isoelectric Point (pI)

54.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015309)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 271
AgsI TTSAA 3 cut(s) 22, 140, 310
AjiI CACGTC 1 cut(s) 200
AluBI AGCT 3 cut(s) 159, 366, 403
AluI AGCT 3 cut(s) 159, 366, 403
ApeKI GCWGC 1 cut(s) 159
AsuHPI GGTGA 1 cut(s) 350
BanII GRGCYC 1 cut(s) 326
BbsI GAAGAC 1 cut(s) 65
BbvI GCAGC 1 cut(s) 146
BfaI CTAG 1 cut(s) 186
BfmI CTRYAG 1 cut(s) 207
BisI GCNGC 1 cut(s) 160
BlsI GCNGC 1 cut(s) 161
BmgBI CACGTC 1 cut(s) 200
BpiI GAAGAC 1 cut(s) 65
BpuEI CTTGAG 1 cut(s) 340
BsaJI CCNNGG 2 cut(s) 77, 193
Bse1I ACTGG 1 cut(s) 347
BseDI CCNNGG 2 cut(s) 77, 193
BseGI GGATG 1 cut(s) 428
BseNI ACTGG 1 cut(s) 347
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 146
Bsp1286I GDGCHC 1 cut(s) 326
Bsp19I CCATGG 2 cut(s) 77, 193
BspACI CCGC 1 cut(s) 271
BsrI ACTGG 1 cut(s) 347
BssECI CCNNGG 2 cut(s) 77, 193
BssT1I CCWWGG 2 cut(s) 77, 193
Bst4CI ACNGT 3 cut(s) 125, 261, 419
BstDSI CCRYGG 2 cut(s) 77, 193
BstF5I GGATG 1 cut(s) 428
BstMWI GCNNNNNNNGC 1 cut(s) 419
BstSFI CTRYAG 1 cut(s) 207
BstV1I GCAGC 1 cut(s) 146
BstV2I GAAGAC 1 cut(s) 65
BtgI CCRYGG 2 cut(s) 77, 193
BtrI CACGTC 1 cut(s) 200
BtsCI GGATG 1 cut(s) 428
CviAII CATG 3 cut(s) 78, 194, 433
CviJI RGCY 8 cut(s) 82, 102, 159, 205, 281, 324, 366, 403
CviKI_1 RGCY 8 cut(s) 82, 102, 159, 205, 281, 324, 366, 403
Eco130I CCWWGG 2 cut(s) 77, 193
Eco24I GRGCYC 1 cut(s) 326
EcoT14I CCWWGG 2 cut(s) 77, 193
EcoT38I GRGCYC 1 cut(s) 326
ErhI CCWWGG 2 cut(s) 77, 193
FaeI CATG 3 cut(s) 81, 197, 436
FaiI YATR 7 cut(s) 79, 174, 195, 209, 384, 390, 434
FalI AAGNNNNNCTT 2 cut(s) 302, 334
FatI CATG 3 cut(s) 77, 193, 432
Fnu4HI GCNGC 1 cut(s) 160
FokI GGATG 1 cut(s) 415
FriOI GRGCYC 1 cut(s) 326
Fsp4HI GCNGC 1 cut(s) 160
FspBI CTAG 1 cut(s) 186
GluI GCNGC 1 cut(s) 160
Hin1II CATG 3 cut(s) 81, 197, 436
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 1 cut(s) 292
HphI GGTGA 1 cut(s) 350
HpyAV CCTTC 3 cut(s) 114, 304, 340
HpyCH4III ACNGT 3 cut(s) 125, 261, 419
HpyCH4IV ACGT 1 cut(s) 199
HpyF10VI GCNNNNNNNGC 1 cut(s) 419
HpySE526I ACGT 1 cut(s) 199
Hsp92II CATG 3 cut(s) 81, 197, 436
LpnPI CCDG 4 cut(s) 157, 169, 281, 328
Lsp1109I GCAGC 1 cut(s) 146
MaeI CTAG 1 cut(s) 186
MaeII ACGT 1 cut(s) 199
MaeIII GTNAC 1 cut(s) 338
MboII GAAGA 3 cut(s) 65, 170, 313
MhlI GDGCHC 1 cut(s) 326
MluCI AATT 2 cut(s) 22, 135
MmeI TCCRAC 1 cut(s) 58
MnlI CCTC 3 cut(s) 38, 41, 48
MseI TTAA 1 cut(s) 47
MslI CAYNNNNRTG 1 cut(s) 198
MspA1I CMGCKG 1 cut(s) 159
MwoI GCNNNNNNNGC 1 cut(s) 419
NcoI CCATGG 2 cut(s) 77, 193
NlaIII CATG 3 cut(s) 81, 197, 436
NmuCI GTSAC 1 cut(s) 338
PfeI GAWTC 1 cut(s) 292
PkrI GCNGC 1 cut(s) 161
PvuII CAGCTG 1 cut(s) 159
RseI CAYNNNNRTG 1 cut(s) 198
SaqAI TTAA 1 cut(s) 47
SatI GCNGC 1 cut(s) 160
SduI GDGCHC 1 cut(s) 326
SetI ASST 7 cut(s) 13, 40, 161, 202, 228, 368, 405
SfcI CTRYAG 1 cut(s) 207
SmiMI CAYNNNNRTG 1 cut(s) 198
SmlI CTYRAG 1 cut(s) 319
SmoI CTYRAG 1 cut(s) 319
Sse9I AATT 2 cut(s) 22, 135
SsiI CCGC 1 cut(s) 271
SspMI CTAG 1 cut(s) 186
StyI CCWWGG 2 cut(s) 77, 193
TaaI ACNGT 3 cut(s) 125, 261, 419
TaiI ACGT 1 cut(s) 202
TasI AATT 2 cut(s) 22, 135
TfiI GAWTC 1 cut(s) 292
Tru1I TTAA 1 cut(s) 47
Tru9I TTAA 1 cut(s) 47
TseFI GTSAC 1 cut(s) 338
TseI GCWGC 1 cut(s) 159
Tsp45I GTSAC 1 cut(s) 338
TspDTI ATGAA 1 cut(s) 96
XspI CTAG 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.