Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11710 AT1G11710 |
| malus_domestica | MD02G1262300.v1.1 MD07G1057900.v1.1 MD07G1059400.v1.1 |
| prunus_persica | Prupe.2G064100_v2.0.a1 |
| pyrus_communis | pycom02g22430 pycom07g04410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1607, 1817 |
| AarI | CACCTGC | 1 cut(s) | 950 |
| Acc36I | ACCTGC | 1 cut(s) | 950 |
| AccI | GTMKAC | 1 cut(s) | 1384 |
| AccII | CGCG | 1 cut(s) | 54 |
| AciI | CCGC | 2 cut(s) | 52, 54 |
| AcsI | RAATTY | 5 cut(s) | 236, 744, 1263, 1461, 1564 |
| AcuI | CTGAAG | 2 cut(s) | 602, 1260 |
| AfaI | GTAC | 6 cut(s) | 295, 475, 579, 881, 1427, 1928 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 64, 226, 227, 978, 1285 |
| AflIII | ACRYGT | 1 cut(s) | 1933 |
| AjnI | CCWGG | 1 cut(s) | 954 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1440, 1472 |
| AluBI | AGCT | 8 cut(s) | 18, 267, 414, 425, 520, 613, 823, 944 |
| AluI | AGCT | 8 cut(s) | 18, 267, 414, 425, 520, 613, 823, 944 |
| Alw26I | GTCTC | 1 cut(s) | 348 |
| Ama87I | CYCGRG | 1 cut(s) | 203 |
| AoxI | GGCC | 2 cut(s) | 55, 749 |
| ApeKI | GCWGC | 1 cut(s) | 1857 |
| ApoI | RAATTY | 5 cut(s) | 236, 744, 1263, 1461, 1564 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1923, 1955 |
| AseI | ATTAAT | 1 cut(s) | 894 |
| AspS9I | GGNCC | 1 cut(s) | 313 |
| AsuHPI | GGTGA | 5 cut(s) | 156, 812, 1393, 1516, 1906 |
| AsuII | TTCGAA | 1 cut(s) | 211 |
| AvaI | CYCGRG | 1 cut(s) | 203 |
| AvaII | GGWCC | 1 cut(s) | 313 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 871, 904 |
| BanII | GRGCYC | 1 cut(s) | 1218 |
| BbvCI | CCTCAGC | 1 cut(s) | 521 |
| BbvI | GCAGC | 1 cut(s) | 1869 |
| BccI | CCATC | 9 cut(s) | 135, 365, 520, 524, 776, 790, 829, 995, 1564 |
| BciT130I | CCWGG | 1 cut(s) | 956 |
| BclI | TGATCA | 2 cut(s) | 1183, 1728 |
| BcoDI | GTCTC | 1 cut(s) | 348 |
| BfaI | CTAG | 7 cut(s) | 152, 600, 704, 753, 995, 1794, 1955 |
| BfmI | CTRYAG | 1 cut(s) | 444 |
| BfuAI | ACCTGC | 1 cut(s) | 950 |
| BisI | GCNGC | 3 cut(s) | 52, 55, 1858 |
| BlpI | GCTNAGC | 1 cut(s) | 14 |
| BlsI | GCNGC | 3 cut(s) | 53, 56, 1859 |
| Bme1390I | CCNGG | 1 cut(s) | 956 |
| Bme18I | GGWCC | 1 cut(s) | 313 |
| BmeT110I | CYCGRG | 1 cut(s) | 203 |
| BmgT120I | GGNCC | 1 cut(s) | 313 |
| BmiI | GGNNCC | 3 cut(s) | 1348, 1411, 1806 |
| BmrFI | CCNGG | 1 cut(s) | 956 |
| BmrI | ACTGGG | 1 cut(s) | 16 |
| BmsI | GCATC | 4 cut(s) | 325, 445, 1553, 1564 |
| BmuI | ACTGGG | 1 cut(s) | 16 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 7, 39, 256, 288 |
| Bpu10I | CCTNAGC | 1 cut(s) | 521 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 14 |
| Bpu14I | TTCGAA | 1 cut(s) | 211 |
| BpuEI | CTTGAG | 2 cut(s) | 64, 1289 |
| Bsa29I | ATCGAT | 1 cut(s) | 1314 |
| BsaJI | CCNNGG | 2 cut(s) | 52, 954 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 64, 226, 227, 978, 1285 |
| Bse1I | ACTGG | 3 cut(s) | 11, 36, 1839 |
| Bse3DI | GCAATG | 1 cut(s) | 717 |
| BseBI | CCWGG | 1 cut(s) | 956 |
| BseCI | ATCGAT | 1 cut(s) | 1314 |
| BseDI | CCNNGG | 2 cut(s) | 52, 954 |
| BseGI | GGATG | 5 cut(s) | 531, 535, 735, 1294, 1579 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 64, 226, 227, 978, 1285 |
| BseMI | GCAATG | 1 cut(s) | 717 |
| BseMII | CTCAG | 3 cut(s) | 5, 84, 512 |
| BseNI | ACTGG | 3 cut(s) | 11, 36, 1839 |
| BseRI | GAGGAG | 2 cut(s) | 151, 1029 |
| BseXI | GCAGC | 1 cut(s) | 1869 |
| BsgI | GTGCAG | 1 cut(s) | 1473 |
| Bsh1236I | CGCG | 1 cut(s) | 54 |
| BshFI | GGCC | 2 cut(s) | 57, 751 |
| BshVI | ATCGAT | 1 cut(s) | 1314 |
| BsiHKCI | CYCGRG | 1 cut(s) | 203 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 64, 226, 227, 978, 1285 |
| BsmAI | GTCTC | 1 cut(s) | 348 |
| BsmI | GAATGC | 1 cut(s) | 698 |
| BsnI | GGCC | 2 cut(s) | 57, 751 |
| BsoBI | CYCGRG | 1 cut(s) | 203 |
| Bsp119I | TTCGAA | 1 cut(s) | 211 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1218 |
| Bsp143I | GATC | 2 cut(s) | 1183, 1728 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 14 |
| BspACI | CCGC | 2 cut(s) | 52, 54 |
| BspANI | GGCC | 2 cut(s) | 57, 751 |
| BspCNI | CTCAG | 3 cut(s) | 6, 85, 513 |
| BspDI | ATCGAT | 1 cut(s) | 1314 |
| BspFNI | CGCG | 1 cut(s) | 54 |
| BspLI | GGNNCC | 3 cut(s) | 1348, 1411, 1806 |
| BspMAI | CTGCAG | 1 cut(s) | 448 |
| BspMI | ACCTGC | 1 cut(s) | 950 |
| BspT104I | TTCGAA | 1 cut(s) | 211 |
| BsrDI | GCAATG | 1 cut(s) | 717 |
| BsrI | ACTGG | 3 cut(s) | 11, 36, 1839 |
| BssECI | CCNNGG | 2 cut(s) | 52, 954 |
| BssMI | GATC | 2 cut(s) | 1183, 1728 |
| Bst2UI | CCWGG | 1 cut(s) | 956 |
| Bst4CI | ACNGT | 5 cut(s) | 225, 278, 298, 547, 1399 |
| Bst6I | CTCTTC | 2 cut(s) | 731, 1680 |
| BstBI | TTCGAA | 1 cut(s) | 211 |
| BstC8I | GCNNGC | 1 cut(s) | 790 |
| BstDEI | CTNAG | 6 cut(s) | 14, 93, 184, 521, 1037, 1247 |
| BstDSI | CCRYGG | 1 cut(s) | 52 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1283 |
| BstF5I | GGATG | 5 cut(s) | 531, 535, 735, 1294, 1579 |
| BstFNI | CGCG | 1 cut(s) | 54 |
| BstKTI | GATC | 2 cut(s) | 1186, 1731 |
| BstMAI | GTCTC | 1 cut(s) | 348 |
| BstMBI | GATC | 2 cut(s) | 1183, 1728 |
| BstNI | CCWGG | 1 cut(s) | 956 |
| BstNSI | RCATGY | 1 cut(s) | 1937 |
| BstSCI | CCNGG | 1 cut(s) | 954 |
| BstSFI | CTRYAG | 1 cut(s) | 444 |
| BstUI | CGCG | 1 cut(s) | 54 |
| BstV1I | GCAGC | 1 cut(s) | 1869 |
| Bsu15I | ATCGAT | 1 cut(s) | 1314 |
| BsuRI | GGCC | 2 cut(s) | 57, 751 |
| BsuTUI | ATCGAT | 1 cut(s) | 1314 |
| BtgI | CCRYGG | 1 cut(s) | 52 |
| BtsCI | GGATG | 5 cut(s) | 531, 535, 735, 1294, 1579 |
| BtsI | GCAGTG | 1 cut(s) | 453 |
| BtsIMutI | CAGTG | 4 cut(s) | 274, 453, 1395, 1554 |
| BveI | ACCTGC | 1 cut(s) | 950 |
| Cac8I | GCNNGC | 1 cut(s) | 790 |
| Cfr13I | GGNCC | 1 cut(s) | 313 |
| Cfr42I | CCGCGG | 1 cut(s) | 55 |
| ClaI | ATCGAT | 1 cut(s) | 1314 |
| Csp6I | GTAC | 6 cut(s) | 294, 474, 578, 880, 1426, 1927 |
| CviAII | CATG | 8 cut(s) | 305, 575, 772, 1351, 1628, 1883, 1891, 1934 |
| CviQI | GTAC | 6 cut(s) | 294, 474, 578, 880, 1426, 1927 |
| DdeI | CTNAG | 6 cut(s) | 14, 93, 184, 521, 1037, 1247 |
| DpnI | GATC | 2 cut(s) | 1185, 1730 |
| DpnII | GATC | 2 cut(s) | 1183, 1728 |
| Eam1104I | CTCTTC | 2 cut(s) | 731, 1680 |
| EarI | CTCTTC | 2 cut(s) | 731, 1680 |
| Eco24I | GRGCYC | 1 cut(s) | 1218 |
| Eco32I | GATATC | 1 cut(s) | 162 |
| Eco47I | GGWCC | 1 cut(s) | 313 |
| Eco57I | CTGAAG | 2 cut(s) | 602, 1260 |
| Eco88I | CYCGRG | 1 cut(s) | 203 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1283 |
| EcoRII | CCWGG | 1 cut(s) | 954 |
| EcoRV | GATATC | 1 cut(s) | 162 |
| EcoT22I | ATGCAT | 2 cut(s) | 1579, 1633 |
| EcoT38I | GRGCYC | 1 cut(s) | 1218 |
| FaeI | CATG | 8 cut(s) | 308, 578, 775, 1354, 1631, 1886, 1894, 1937 |
| FatI | CATG | 8 cut(s) | 304, 574, 771, 1350, 1627, 1882, 1890, 1933 |
| FauNDI | CATATG | 1 cut(s) | 634 |
| FbaI | TGATCA | 2 cut(s) | 1183, 1728 |
| FblI | GTMKAC | 1 cut(s) | 1384 |
| Fnu4HI | GCNGC | 3 cut(s) | 52, 55, 1858 |
| FokI | GGATG | 5 cut(s) | 538, 542, 742, 1301, 1586 |
| FriOI | GRGCYC | 1 cut(s) | 1218 |
| Fsp4HI | GCNGC | 3 cut(s) | 52, 55, 1858 |
| FspBI | CTAG | 7 cut(s) | 152, 600, 704, 753, 995, 1794, 1955 |
| GluI | GCNGC | 3 cut(s) | 52, 55, 1858 |
| HaeIII | GGCC | 2 cut(s) | 57, 751 |
| Hin1II | CATG | 8 cut(s) | 308, 578, 775, 1354, 1631, 1886, 1894, 1937 |
| HindIII | AAGCTT | 2 cut(s) | 423, 821 |
| HinfI | GANTC | 6 cut(s) | 355, 480, 968, 1251, 1624, 1710 |
| HphI | GGTGA | 5 cut(s) | 156, 812, 1393, 1516, 1906 |
| Hpy166II | GTNNAC | 3 cut(s) | 550, 1090, 1385 |
| Hpy188I | TCNGA | 5 cut(s) | 94, 718, 729, 1071, 1156 |
| Hpy8I | GTNNAC | 3 cut(s) | 550, 1090, 1385 |
| HpyAV | CCTTC | 7 cut(s) | 68, 392, 488, 670, 1115, 1430, 1774 |
| HpyCH4III | ACNGT | 5 cut(s) | 225, 278, 298, 547, 1399 |
| HpyCH4IV | ACGT | 1 cut(s) | 1925 |
| HpyF3I | CTNAG | 6 cut(s) | 14, 93, 184, 521, 1037, 1247 |
| HpySE526I | ACGT | 1 cut(s) | 1925 |
| Hsp92II | CATG | 8 cut(s) | 308, 578, 775, 1354, 1631, 1886, 1894, 1937 |
| Ksp22I | TGATCA | 2 cut(s) | 1183, 1728 |
| KspI | CCGCGG | 1 cut(s) | 55 |
| Kzo9I | GATC | 2 cut(s) | 1183, 1728 |
| LmnI | GCTCC | 3 cut(s) | 384, 785, 1346 |
| Lsp1109I | GCAGC | 1 cut(s) | 1869 |
| LweI | GCATC | 4 cut(s) | 325, 445, 1553, 1564 |
| MaeI | CTAG | 7 cut(s) | 152, 600, 704, 753, 995, 1794, 1955 |
| MaeII | ACGT | 1 cut(s) | 1925 |
| MaeIII | GTNAC | 6 cut(s) | 541, 760, 859, 1234, 1399, 1711 |
| MalI | GATC | 2 cut(s) | 1185, 1730 |
| MboI | GATC | 2 cut(s) | 1183, 1728 |
| MboII | GAAGA | 7 cut(s) | 748, 844, 1660, 1697, 1877, 1943, 1970 |
| MfeI | CAATTG | 3 cut(s) | 244, 883, 1355 |
| MhlI | GDGCHC | 1 cut(s) | 1218 |
| MlyI | GAGTC | 2 cut(s) | 977, 1719 |
| MmeI | TCCRAC | 2 cut(s) | 696, 1179 |
| Mph1103I | ATGCAT | 2 cut(s) | 1579, 1633 |
| MseI | TTAA | 7 cut(s) | 123, 513, 570, 768, 894, 1209, 1899 |
| MspA1I | CMGCKG | 1 cut(s) | 54 |
| MspR9I | CCNGG | 1 cut(s) | 956 |
| MunI | CAATTG | 3 cut(s) | 244, 883, 1355 |
| Mva1269I | GAATGC | 1 cut(s) | 698 |
| MvaI | CCWGG | 1 cut(s) | 956 |
| MvnI | CGCG | 1 cut(s) | 54 |
| NdeI | CATATG | 1 cut(s) | 634 |
| NdeII | GATC | 2 cut(s) | 1183, 1728 |
| NlaIII | CATG | 8 cut(s) | 308, 578, 775, 1354, 1631, 1886, 1894, 1937 |
| NlaIV | GGNNCC | 3 cut(s) | 1348, 1411, 1806 |
| NmuCI | GTSAC | 3 cut(s) | 1234, 1399, 1711 |
| NsiI | ATGCAT | 2 cut(s) | 1579, 1633 |
| NspI | RCATGY | 1 cut(s) | 1937 |
| NspV | TTCGAA | 1 cut(s) | 211 |
| PaeR7I | CTCGAG | 1 cut(s) | 203 |
| PaqCI | CACCTGC | 1 cut(s) | 950 |
| PciI | ACATGT | 1 cut(s) | 1933 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 489 |
| PctI | GAATGC | 1 cut(s) | 698 |
| PfeI | GAWTC | 4 cut(s) | 355, 480, 1251, 1624 |
| PflFI | GACNNNGTC | 1 cut(s) | 1397 |
| PkrI | GCNGC | 3 cut(s) | 53, 56, 1859 |
| PleI | GAGTC | 2 cut(s) | 976, 1718 |
| PpsI | GAGTC | 2 cut(s) | 976, 1718 |
| PscI | ACATGT | 1 cut(s) | 1933 |
| PshBI | ATTAAT | 1 cut(s) | 894 |
| PsiI | TTATAA | 2 cut(s) | 1607, 1817 |
| Psp6I | CCWGG | 1 cut(s) | 954 |
| PspGI | CCWGG | 1 cut(s) | 954 |
| PspN4I | GGNNCC | 3 cut(s) | 1348, 1411, 1806 |
| PspPI | GGNCC | 1 cut(s) | 313 |
| PstI | CTGCAG | 1 cut(s) | 448 |
| PsyI | GACNNNGTC | 1 cut(s) | 1397 |
| RsaI | GTAC | 6 cut(s) | 295, 475, 579, 881, 1427, 1928 |
| RsaNI | GTAC | 6 cut(s) | 294, 474, 578, 880, 1426, 1927 |
| SacII | CCGCGG | 1 cut(s) | 55 |
| SaqAI | TTAA | 7 cut(s) | 123, 513, 570, 768, 894, 1209, 1899 |
| SatI | GCNGC | 3 cut(s) | 52, 55, 1858 |
| Sau3AI | GATC | 2 cut(s) | 1183, 1728 |
| Sau96I | GGNCC | 1 cut(s) | 313 |
| SchI | GAGTC | 2 cut(s) | 977, 1719 |
| ScrFI | CCNGG | 1 cut(s) | 956 |
| SduI | GDGCHC | 1 cut(s) | 1218 |
| SfaNI | GCATC | 4 cut(s) | 325, 445, 1553, 1564 |
| SfcI | CTRYAG | 1 cut(s) | 444 |
| Sfr274I | CTCGAG | 1 cut(s) | 203 |
| Sfr303I | CCGCGG | 1 cut(s) | 55 |
| SfuI | TTCGAA | 1 cut(s) | 211 |
| SgrBI | CCGCGG | 1 cut(s) | 55 |
| SinI | GGWCC | 1 cut(s) | 313 |
| SlaI | CTCGAG | 1 cut(s) | 203 |
| SmlI | CTYRAG | 3 cut(s) | 79, 203, 1268 |
| SmoI | CTYRAG | 3 cut(s) | 79, 203, 1268 |
| SsiI | CCGC | 2 cut(s) | 52, 54 |
| SspI | AATATT | 1 cut(s) | 722 |
| SspMI | CTAG | 7 cut(s) | 152, 600, 704, 753, 995, 1794, 1955 |
| StyD4I | CCNGG | 1 cut(s) | 954 |
| TaaI | ACNGT | 5 cut(s) | 225, 278, 298, 547, 1399 |
| TaiI | ACGT | 1 cut(s) | 1928 |
| TaqI | TCGA | 5 cut(s) | 204, 211, 253, 478, 1314 |
| TaqII | GACCGA | 1 cut(s) | 506 |
| TatI | WGTACW | 3 cut(s) | 293, 473, 577 |
| TauI | GCSGC | 2 cut(s) | 54, 57 |
| TfiI | GAWTC | 4 cut(s) | 355, 480, 1251, 1624 |
| Tru1I | TTAA | 7 cut(s) | 123, 513, 570, 768, 894, 1209, 1899 |
| Tru9I | TTAA | 7 cut(s) | 123, 513, 570, 768, 894, 1209, 1899 |
| TscAI | CASTG | 4 cut(s) | 281, 453, 1402, 1554 |
| TseFI | GTSAC | 3 cut(s) | 1234, 1399, 1711 |
| TseI | GCWGC | 1 cut(s) | 1857 |
| Tsp45I | GTSAC | 3 cut(s) | 1234, 1399, 1711 |
| TspRI | CASTG | 4 cut(s) | 281, 453, 1402, 1554 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1397 |
| VpaK11BI | GGWCC | 1 cut(s) | 313 |
| VspI | ATTAAT | 1 cut(s) | 894 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1283 |
| XapI | RAATTY | 5 cut(s) | 236, 744, 1263, 1461, 1564 |
| XbaI | TCTAGA | 2 cut(s) | 151, 1954 |
| XceI | RCATGY | 1 cut(s) | 1937 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1357 |
| XhoI | CTCGAG | 1 cut(s) | 203 |
| XmiI | GTMKAC | 1 cut(s) | 1384 |
| XspI | CTAG | 7 cut(s) | 152, 600, 704, 753, 995, 1794, 1955 |
| Zsp2I | ATGCAT | 2 cut(s) | 1579, 1633 |