zinc-finger of the FCS-type, C2-C2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44670 |
| fragaria_vesca | FvH4_7g08920 |
| malus_domestica | MD02G1222600.v1.1 MD07G1092800.v1.1 |
| prunus_persica | Prupe.2G118400_v2.0.a1 Prupe.2G118400_v2.0.a1 |
| pyrus_communis | pycom02g18900 pycom07g07620 |
| rosa_chinensis | RchiOBHm_Chr1g0344361 |
| rosa_laevigata | RLG00000028905 |
| rosa_multiflora | Rmu_sc0024072.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00309840 |
| rosa_rugosa | Rorug01G0173200 |
| rosa_samantha | Rh1AG189600 Rh1BG156300 Rh1CG175300 Rh1DG187900 |
| rosa_wichuraiana | Rw1G015620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 293 |
| AccI | GTMKAC | 1 cut(s) | 154 |
| AfaI | GTAC | 2 cut(s) | 119, 282 |
| AluBI | AGCT | 1 cut(s) | 195 |
| AluI | AGCT | 1 cut(s) | 195 |
| BanI | GGYRCC | 1 cut(s) | 293 |
| BanII | GRGCYC | 1 cut(s) | 235 |
| BfmI | CTRYAG | 1 cut(s) | 303 |
| BmiI | GGNNCC | 2 cut(s) | 232, 295 |
| BmsI | GCATC | 1 cut(s) | 55 |
| Bse1I | ACTGG | 2 cut(s) | 13, 222 |
| BseMII | CTCAG | 2 cut(s) | 117, 250 |
| BseNI | ACTGG | 2 cut(s) | 13, 222 |
| BshNI | GGYRCC | 1 cut(s) | 293 |
| Bsp1286I | GDGCHC | 1 cut(s) | 235 |
| Bsp1407I | TGTACA | 1 cut(s) | 117 |
| Bsp143I | GATC | 1 cut(s) | 37 |
| BspCNI | CTCAG | 2 cut(s) | 116, 249 |
| BspLI | GGNNCC | 2 cut(s) | 232, 295 |
| BspQI | GCTCTTC | 1 cut(s) | 185 |
| BspT107I | GGYRCC | 1 cut(s) | 293 |
| BsrGI | TGTACA | 1 cut(s) | 117 |
| BsrI | ACTGG | 2 cut(s) | 13, 222 |
| BssMI | GATC | 1 cut(s) | 37 |
| Bst4CI | ACNGT | 2 cut(s) | 135, 298 |
| Bst6I | CTCTTC | 2 cut(s) | 185, 214 |
| BstAUI | TGTACA | 1 cut(s) | 117 |
| BstDEI | CTNAG | 2 cut(s) | 103, 236 |
| BstKTI | GATC | 1 cut(s) | 40 |
| BstMBI | GATC | 1 cut(s) | 37 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 49 |
| BstNSI | RCATGY | 1 cut(s) | 16 |
| BstSFI | CTRYAG | 1 cut(s) | 303 |
| Csp6I | GTAC | 2 cut(s) | 118, 281 |
| CviAII | CATG | 2 cut(s) | 13, 115 |
| CviJI | RGCY | 5 cut(s) | 52, 182, 195, 233, 308 |
| CviKI_1 | RGCY | 5 cut(s) | 52, 182, 195, 233, 308 |
| CviQI | GTAC | 2 cut(s) | 118, 281 |
| DdeI | CTNAG | 2 cut(s) | 103, 236 |
| DpnI | GATC | 1 cut(s) | 39 |
| DpnII | GATC | 1 cut(s) | 37 |
| Eam1104I | CTCTTC | 2 cut(s) | 185, 214 |
| EarI | CTCTTC | 2 cut(s) | 185, 214 |
| Eco24I | GRGCYC | 1 cut(s) | 235 |
| EcoT38I | GRGCYC | 1 cut(s) | 235 |
| FaeI | CATG | 2 cut(s) | 16, 118 |
| FaiI | YATR | 2 cut(s) | 14, 116 |
| FatI | CATG | 2 cut(s) | 12, 114 |
| FblI | GTMKAC | 1 cut(s) | 154 |
| FriOI | GRGCYC | 1 cut(s) | 235 |
| Hin1II | CATG | 2 cut(s) | 16, 118 |
| Hpy166II | GTNNAC | 2 cut(s) | 155, 281 |
| Hpy188I | TCNGA | 3 cut(s) | 106, 239, 247 |
| Hpy8I | GTNNAC | 2 cut(s) | 155, 281 |
| HpyCH4III | ACNGT | 2 cut(s) | 135, 298 |
| HpyCH4V | TGCA | 1 cut(s) | 81 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 49 |
| HpyF3I | CTNAG | 2 cut(s) | 103, 236 |
| Hsp92II | CATG | 2 cut(s) | 16, 118 |
| Kzo9I | GATC | 1 cut(s) | 37 |
| LguI | GCTCTTC | 1 cut(s) | 185 |
| LmnI | GCTCC | 1 cut(s) | 230 |
| LpnPI | CCDG | 5 cut(s) | 106, 155, 181, 235, 276 |
| LweI | GCATC | 1 cut(s) | 55 |
| MalI | GATC | 1 cut(s) | 39 |
| MboI | GATC | 1 cut(s) | 37 |
| MboII | GAAGA | 7 cut(s) | 47, 103, 201, 202, 204, 207, 210 |
| MhlI | GDGCHC | 1 cut(s) | 235 |
| MluCI | AATT | 1 cut(s) | 45 |
| MnlI | CCTC | 5 cut(s) | 63, 172, 217, 245, 279 |
| MslI | CAYNNNNRTG | 1 cut(s) | 113 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 49 |
| NdeII | GATC | 1 cut(s) | 37 |
| NlaIII | CATG | 2 cut(s) | 16, 118 |
| NlaIV | GGNNCC | 2 cut(s) | 232, 295 |
| NspI | RCATGY | 1 cut(s) | 16 |
| PciSI | GCTCTTC | 1 cut(s) | 185 |
| PspN4I | GGNNCC | 2 cut(s) | 232, 295 |
| RsaI | GTAC | 2 cut(s) | 119, 282 |
| RsaNI | GTAC | 2 cut(s) | 118, 281 |
| RseI | CAYNNNNRTG | 1 cut(s) | 113 |
| SapI | GCTCTTC | 1 cut(s) | 185 |
| Sau3AI | GATC | 1 cut(s) | 37 |
| SduI | GDGCHC | 1 cut(s) | 235 |
| SetI | ASST | 2 cut(s) | 174, 197 |
| SfaNI | GCATC | 1 cut(s) | 55 |
| SfcI | CTRYAG | 1 cut(s) | 303 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 113 |
| Sse9I | AATT | 1 cut(s) | 45 |
| TaaI | ACNGT | 2 cut(s) | 135, 298 |
| TasI | AATT | 1 cut(s) | 45 |
| TatI | WGTACW | 1 cut(s) | 117 |
| TspDTI | ATGAA | 1 cut(s) | 103 |
| TspGWI | ACGGA | 1 cut(s) | 298 |
| XceI | RCATGY | 1 cut(s) | 16 |
| XmiI | GTMKAC | 1 cut(s) | 154 |