Prupe.2G191600_v2.0.a1

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0014825
Physical Location & Seq
Forward (+)
23104926 .. 23106928
2003 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G191600.1

Sequence Viewer

Length: 402 bp
ATGCAGACATGGATCCTGAAAAATATCCCTGTCCAGGTGGCTCAGAGCAAGTCTTCTCAGAAGCGACTCTTCAAATCAAGGCCTCATGTCATTTTCCTTGATTTAGGCATGACTGCTAAACTCTCTAAAAGTGATAGAGTAAATTTAGTGGAATTTTTCAAGGCTGTTGCTCTTCTTCGTGATGGGCTTACTTCTGCTGAGTGCACACTCAGAATATCTAAGCAACACAAGTGCCCAGATCCAAAGGCTTTCATTGAGCAAGGGGAGGCGGCATTCACTTTCTGGGGTACTCCAGAAGGTGATCAGCACATCCTGCCCTTACTGGAGAAATTTAGGCGTCATAGAGTCAATGTTGATGGCAATGTCTCTACTCACTGTCATGGTAGCCACTTTGGTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

134

Amino Acids

15.04

Weight (kDa)

9.67

Isoelectric Point (pI)

50.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 269
AclWI GGATC 3 cut(s) 7, 20, 233
AcsI RAATTY 3 cut(s) 142, 152, 329
AcyI GRCGYC 1 cut(s) 337
AfaI GTAC 1 cut(s) 289
AfiI CCNNNNNNNGG 1 cut(s) 34
AgsI TTSAA 2 cut(s) 73, 160
AjnI CCWGG 1 cut(s) 33
Alw21I GWGCWC 1 cut(s) 206
Alw26I GTCTC 1 cut(s) 370
Alw44I GTGCAC 1 cut(s) 202
AlwI GGATC 3 cut(s) 7, 20, 233
AoxI GGCC 1 cut(s) 80
ApaLI GTGCAC 1 cut(s) 202
ApoI RAATTY 3 cut(s) 142, 152, 329
AsuHPI GGTGA 1 cut(s) 311
BaeGI GKGCMC 2 cut(s) 206, 236
BamHI GGATCC 1 cut(s) 12
BbsI GAAGAC 1 cut(s) 45
Bbv12I GWGCWC 1 cut(s) 206
BccI CCATC 2 cut(s) 176, 350
BciT130I CCWGG 1 cut(s) 35
BclI TGATCA 1 cut(s) 301
BcoDI GTCTC 1 cut(s) 370
BisI GCNGC 1 cut(s) 270
BlsI GCNGC 1 cut(s) 271
Bme1390I CCNGG 1 cut(s) 35
BmiI GGNNCC 1 cut(s) 14
BmrFI CCNGG 1 cut(s) 35
BpiI GAAGAC 1 cut(s) 45
BpmI CTGGAG 2 cut(s) 276, 344
BsaHI GRCGYC 1 cut(s) 337
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse1I ACTGG 1 cut(s) 327
Bse3DI GCAATG 1 cut(s) 367
BseBI CCWGG 1 cut(s) 35
BseGI GGATG 1 cut(s) 309
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMI GCAATG 1 cut(s) 367
BseMII CTCAG 4 cut(s) 56, 71, 189, 223
BseNI ACTGG 1 cut(s) 327
BseSI GKGCMC 2 cut(s) 206, 236
BshFI GGCC 1 cut(s) 82
BsiHKAI GWGCWC 1 cut(s) 206
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 1 cut(s) 370
BsmI GAATGC 1 cut(s) 272
BsnI GGCC 1 cut(s) 82
Bsp1286I GDGCHC 2 cut(s) 206, 236
Bsp143I GATC 3 cut(s) 12, 238, 301
BspACI CCGC 1 cut(s) 269
BspANI GGCC 1 cut(s) 82
BspCNI CTCAG 4 cut(s) 55, 70, 190, 222
BspLI GGNNCC 1 cut(s) 14
BspPI GGATC 3 cut(s) 7, 20, 233
BspQI GCTCTTC 1 cut(s) 177
BsrDI GCAATG 1 cut(s) 367
BsrI ACTGG 1 cut(s) 327
BssMI GATC 3 cut(s) 12, 238, 301
BssNI GRCGYC 1 cut(s) 337
Bst2UI CCWGG 1 cut(s) 35
Bst4CI ACNGT 1 cut(s) 377
Bst6I CTCTTC 2 cut(s) 74, 177
BstACI GRCGYC 1 cut(s) 337
BstAPI GCANNNNNTGC 1 cut(s) 313
BstDEI CTNAG 5 cut(s) 42, 57, 198, 209, 219
BstF5I GGATG 1 cut(s) 309
BstKTI GATC 3 cut(s) 15, 241, 304
BstMAI GTCTC 1 cut(s) 370
BstMBI GATC 3 cut(s) 12, 238, 301
BstMWI GCNNNNNNNGC 1 cut(s) 313
BstNI CCWGG 1 cut(s) 35
BstSCI CCNGG 1 cut(s) 33
BstSLI GKGCMC 2 cut(s) 206, 236
BstV2I GAAGAC 1 cut(s) 45
BstX2I RGATCY 2 cut(s) 12, 238
BstYI RGATCY 2 cut(s) 12, 238
BsuRI GGCC 1 cut(s) 82
BtsCI GGATG 1 cut(s) 309
BtsIMutI CAGTG 1 cut(s) 373
CseI GACGC 1 cut(s) 326
Csp6I GTAC 1 cut(s) 288
CviAII CATG 4 cut(s) 9, 86, 109, 380
CviJI RGCY 6 cut(s) 41, 82, 164, 187, 248, 387
CviKI_1 RGCY 6 cut(s) 41, 82, 164, 187, 248, 387
CviQI GTAC 1 cut(s) 288
DdeI CTNAG 5 cut(s) 42, 57, 198, 209, 219
DpnI GATC 3 cut(s) 14, 240, 303
DpnII GATC 3 cut(s) 12, 238, 301
Eam1104I CTCTTC 2 cut(s) 74, 177
EarI CTCTTC 2 cut(s) 74, 177
Eco147I AGGCCT 1 cut(s) 82
EcoRII CCWGG 1 cut(s) 33
FaeI CATG 4 cut(s) 12, 89, 112, 383
FaiI YATR 5 cut(s) 10, 87, 110, 342, 381
FalI AAGNNNNNCTT 2 cut(s) 53, 85
FatI CATG 4 cut(s) 8, 85, 108, 379
FbaI TGATCA 1 cut(s) 301
Fnu4HI GCNGC 1 cut(s) 270
FokI GGATG 1 cut(s) 296
Fsp4HI GCNGC 1 cut(s) 270
GluI GCNGC 1 cut(s) 270
GsuI CTGGAG 2 cut(s) 276, 344
HaeIII GGCC 1 cut(s) 82
HgaI GACGC 1 cut(s) 326
Hin1I GRCGYC 1 cut(s) 337
Hin1II CATG 4 cut(s) 12, 89, 112, 383
HinfI GANTC 2 cut(s) 66, 345
HphI GGTGA 1 cut(s) 311
Hpy166II GTNNAC 1 cut(s) 204
Hpy188I TCNGA 3 cut(s) 45, 60, 212
Hpy188III TCNNGA 3 cut(s) 16, 179, 293
Hpy8I GTNNAC 1 cut(s) 204
HpyAV CCTTC 1 cut(s) 290
HpyCH4III ACNGT 1 cut(s) 377
HpyCH4V TGCA 2 cut(s) 4, 204
HpyF10VI GCNNNNNNNGC 1 cut(s) 313
HpyF3I CTNAG 5 cut(s) 42, 57, 198, 209, 219
Hsp92I GRCGYC 1 cut(s) 337
Hsp92II CATG 4 cut(s) 12, 89, 112, 383
Ksp22I TGATCA 1 cut(s) 301
Kzo9I GATC 3 cut(s) 12, 238, 301
LguI GCTCTTC 1 cut(s) 177
LpnPI CCDG 9 cut(s) 20, 29, 42, 47, 249, 268, 306, 308, 326
MalI GATC 3 cut(s) 14, 240, 303
MboI GATC 3 cut(s) 12, 238, 301
MboII GAAGA 4 cut(s) 45, 61, 164, 167
MflI RGATCY 2 cut(s) 12, 238
MhlI GDGCHC 2 cut(s) 206, 236
MluCI AATT 3 cut(s) 142, 152, 329
MlyI GAGTC 2 cut(s) 60, 354
MnlI CCTC 2 cut(s) 93, 259
MseI TTAA 1 cut(s) 400
MslI CAYNNNNRTG 1 cut(s) 378
MspR9I CCNGG 1 cut(s) 35
Mva1269I GAATGC 1 cut(s) 272
MvaI CCWGG 1 cut(s) 35
MwoI GCNNNNNNNGC 1 cut(s) 313
NdeII GATC 3 cut(s) 12, 238, 301
NlaIII CATG 4 cut(s) 12, 89, 112, 383
NlaIV GGNNCC 1 cut(s) 14
PceI AGGCCT 1 cut(s) 82
PciSI GCTCTTC 1 cut(s) 177
PctI GAATGC 1 cut(s) 272
PkrI GCNGC 1 cut(s) 271
PleI GAGTC 2 cut(s) 60, 353
PpsI GAGTC 2 cut(s) 60, 353
Psp6I CCWGG 1 cut(s) 33
PspGI CCWGG 1 cut(s) 33
PspN4I GGNNCC 1 cut(s) 14
PsuI RGATCY 2 cut(s) 12, 238
RsaI GTAC 1 cut(s) 289
RsaNI GTAC 1 cut(s) 288
RseI CAYNNNNRTG 1 cut(s) 378
SapI GCTCTTC 1 cut(s) 177
SaqAI TTAA 1 cut(s) 400
SatI GCNGC 1 cut(s) 270
Sau3AI GATC 3 cut(s) 12, 238, 301
SchI GAGTC 2 cut(s) 60, 354
ScrFI CCNGG 1 cut(s) 35
SduI GDGCHC 2 cut(s) 206, 236
SetI ASST 2 cut(s) 39, 301
SmiMI CAYNNNNRTG 1 cut(s) 378
Sse9I AATT 3 cut(s) 142, 152, 329
SseBI AGGCCT 1 cut(s) 82
SsiI CCGC 1 cut(s) 269
StuI AGGCCT 1 cut(s) 82
StyD4I CCNGG 1 cut(s) 33
TaaI ACNGT 1 cut(s) 377
TasI AATT 3 cut(s) 142, 152, 329
TauI GCSGC 1 cut(s) 272
Tru1I TTAA 1 cut(s) 400
Tru9I TTAA 1 cut(s) 400
TscAI CASTG 1 cut(s) 380
TspDTI ATGAA 1 cut(s) 241
TspRI CASTG 1 cut(s) 380
VneI GTGCAC 1 cut(s) 202
XapI RAATTY 3 cut(s) 142, 152, 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.