Prupe.3G301800_v2.0.a1

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0014825
Physical Location & Seq
Forward (+)
26606519 .. 26609651
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G301800.1

Sequence Viewer

Length: 237 bp
ATGCTCCTGGACCTGCAAGTGGAGGAGGCATTCGCTTTCTGGGGTACTCCAGAAGGTGATCTGGTCCATCCTGCTGAGTGTATGCAGCAGTTACTGGAGAAAGTTAGGCGTCATAGAGTCAATGTCGATGGCAATGTCTGTACAGTCATGGTAACCACTTTGGTTCTTGAGGGATGGCAGCGGAAATTTGATCCCAGGTACAATGTGATGCAAACACTGCTTCTCAAAGCTGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

79

Amino Acids

8.99

Weight (kDa)

5.55

Isoelectric Point (pI)

38.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 21
AciI CCGC 1 cut(s) 181
AclWI GGATC 1 cut(s) 185
AcsI RAATTY 1 cut(s) 185
AcyI GRCGYC 1 cut(s) 109
AfaI GTAC 3 cut(s) 46, 142, 200
AfiI CCNNNNNNNGG 1 cut(s) 19
AjnI CCWGG 2 cut(s) 6, 194
AluBI AGCT 1 cut(s) 230
AluI AGCT 1 cut(s) 230
AlwI GGATC 1 cut(s) 185
AlwNI CAGNNNCTG 1 cut(s) 94
ApeKI GCWGC 2 cut(s) 85, 178
ApoI RAATTY 1 cut(s) 185
AspS9I GGNCC 2 cut(s) 10, 64
AsuHPI GGTGA 1 cut(s) 68
AvaII GGWCC 2 cut(s) 10, 64
BbvI GCAGC 2 cut(s) 97, 190
BccI CCATC 3 cut(s) 75, 122, 168
BciT130I CCWGG 2 cut(s) 8, 196
BfuAI ACCTGC 1 cut(s) 21
BisI GCNGC 2 cut(s) 86, 179
BlsI GCNGC 2 cut(s) 87, 180
Bme1390I CCNGG 2 cut(s) 8, 196
Bme18I GGWCC 2 cut(s) 10, 64
BmgT120I GGNCC 2 cut(s) 10, 64
BmrFI CCNGG 2 cut(s) 8, 196
BmsI GCATC 1 cut(s) 198
BpmI CTGGAG 2 cut(s) 33, 116
BpuEI CTTGAG 1 cut(s) 188
BsaHI GRCGYC 1 cut(s) 109
BsaJI CCNNGG 1 cut(s) 194
Bsc4I CCNNNNNNNGG 1 cut(s) 19
Bse1I ACTGG 1 cut(s) 99
Bse3DI GCAATG 1 cut(s) 139
BseBI CCWGG 2 cut(s) 8, 196
BseDI CCNNGG 1 cut(s) 194
BseGI GGATG 2 cut(s) 67, 179
BseLI CCNNNNNNNGG 1 cut(s) 19
BseMI GCAATG 1 cut(s) 139
BseMII CTCAG 1 cut(s) 66
BseNI ACTGG 1 cut(s) 99
BseRI GAGGAG 1 cut(s) 38
BseXI GCAGC 2 cut(s) 97, 190
BslI CCNNNNNNNGG 1 cut(s) 19
BsmI GAATGC 1 cut(s) 29
Bsp1407I TGTACA 1 cut(s) 140
Bsp143I GATC 2 cut(s) 58, 190
BspACI CCGC 1 cut(s) 181
BspCNI CTCAG 1 cut(s) 67
BspMI ACCTGC 1 cut(s) 21
BspPI GGATC 1 cut(s) 185
BsrDI GCAATG 1 cut(s) 139
BsrGI TGTACA 1 cut(s) 140
BsrI ACTGG 1 cut(s) 99
BssECI CCNNGG 1 cut(s) 194
BssMI GATC 2 cut(s) 58, 190
BssNI GRCGYC 1 cut(s) 109
Bst2UI CCWGG 2 cut(s) 8, 196
Bst4CI ACNGT 1 cut(s) 145
BstACI GRCGYC 1 cut(s) 109
BstAPI GCANNNNNTGC 1 cut(s) 217
BstAUI TGTACA 1 cut(s) 140
BstC8I GCNNGC 1 cut(s) 232
BstDEI CTNAG 1 cut(s) 75
BstEII GGTNACC 1 cut(s) 151
BstF5I GGATG 2 cut(s) 67, 179
BstKTI GATC 2 cut(s) 61, 193
BstMBI GATC 2 cut(s) 58, 190
BstMWI GCNNNNNNNGC 1 cut(s) 217
BstNI CCWGG 2 cut(s) 8, 196
BstPI GGTNACC 1 cut(s) 151
BstSCI CCNGG 2 cut(s) 6, 194
BstV1I GCAGC 2 cut(s) 97, 190
BtsCI GGATG 2 cut(s) 67, 179
BtsI GCAGTG 1 cut(s) 215
BtsIMutI CAGTG 1 cut(s) 215
BveI ACCTGC 1 cut(s) 21
Cac8I GCNNGC 1 cut(s) 232
CaiI CAGNNNCTG 1 cut(s) 94
Cfr13I GGNCC 2 cut(s) 10, 64
CseI GACGC 1 cut(s) 98
Csp6I GTAC 3 cut(s) 45, 141, 199
CviAII CATG 1 cut(s) 148
CviJI RGCY 2 cut(s) 230, 234
CviKI_1 RGCY 2 cut(s) 230, 234
CviQI GTAC 3 cut(s) 45, 141, 199
DdeI CTNAG 1 cut(s) 75
DpnI GATC 2 cut(s) 60, 192
DpnII GATC 2 cut(s) 58, 190
Eco47I GGWCC 2 cut(s) 10, 64
Eco91I GGTNACC 1 cut(s) 151
EcoO65I GGTNACC 1 cut(s) 151
EcoRII CCWGG 2 cut(s) 6, 194
FaeI CATG 1 cut(s) 151
FaiI YATR 3 cut(s) 83, 114, 149
FatI CATG 1 cut(s) 147
Fnu4HI GCNGC 2 cut(s) 86, 179
FokI GGATG 2 cut(s) 54, 186
Fsp4HI GCNGC 2 cut(s) 86, 179
GluI GCNGC 2 cut(s) 86, 179
GsuI CTGGAG 2 cut(s) 33, 116
HgaI GACGC 1 cut(s) 98
Hin1I GRCGYC 1 cut(s) 109
Hin1II CATG 1 cut(s) 151
HinfI GANTC 1 cut(s) 117
HphI GGTGA 1 cut(s) 68
Hpy188III TCNNGA 2 cut(s) 50, 167
HpyAV CCTTC 1 cut(s) 47
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4V TGCA 3 cut(s) 16, 85, 211
HpyF10VI GCNNNNNNNGC 1 cut(s) 217
HpyF3I CTNAG 1 cut(s) 75
Hsp92I GRCGYC 1 cut(s) 109
Hsp92II CATG 1 cut(s) 151
Kzo9I GATC 2 cut(s) 58, 190
LmnI GCTCC 1 cut(s) 9
Lsp1109I GCAGC 2 cut(s) 97, 190
LweI GCATC 1 cut(s) 198
MaeIII GTNAC 2 cut(s) 90, 151
MalI GATC 2 cut(s) 60, 192
MboI GATC 2 cut(s) 58, 190
MluCI AATT 1 cut(s) 185
MlyI GAGTC 1 cut(s) 126
MnlI CCTC 3 cut(s) 16, 19, 163
MspA1I CMGCKG 1 cut(s) 181
MspR9I CCNGG 2 cut(s) 8, 196
Mva1269I GAATGC 1 cut(s) 29
MvaI CCWGG 2 cut(s) 8, 196
MwoI GCNNNNNNNGC 1 cut(s) 217
NdeII GATC 2 cut(s) 58, 190
NlaIII CATG 1 cut(s) 151
PctI GAATGC 1 cut(s) 29
PfoI TCCNGGA 1 cut(s) 6
PkrI GCNGC 2 cut(s) 87, 180
PleI GAGTC 1 cut(s) 125
PpsI GAGTC 1 cut(s) 125
Psp6I CCWGG 2 cut(s) 6, 194
PspEI GGTNACC 1 cut(s) 151
PspGI CCWGG 2 cut(s) 6, 194
PspPI GGNCC 2 cut(s) 10, 64
PstNI CAGNNNCTG 1 cut(s) 94
RsaI GTAC 3 cut(s) 46, 142, 200
RsaNI GTAC 3 cut(s) 45, 141, 199
SatI GCNGC 2 cut(s) 86, 179
Sau3AI GATC 2 cut(s) 58, 190
Sau96I GGNCC 2 cut(s) 10, 64
SchI GAGTC 1 cut(s) 126
ScrFI CCNGG 2 cut(s) 8, 196
SetI ASST 4 cut(s) 15, 58, 200, 232
SfaNI GCATC 1 cut(s) 198
SinI GGWCC 2 cut(s) 10, 64
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
Sse9I AATT 1 cut(s) 185
SsiI CCGC 1 cut(s) 181
StyD4I CCNGG 2 cut(s) 6, 194
TaaI ACNGT 1 cut(s) 145
TaqI TCGA 1 cut(s) 126
TasI AATT 1 cut(s) 185
TatI WGTACW 1 cut(s) 140
TscAI CASTG 1 cut(s) 222
TseI GCWGC 2 cut(s) 85, 178
TspRI CASTG 1 cut(s) 222
VpaK11BI GGWCC 2 cut(s) 10, 64
XapI RAATTY 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.