Prupe.6G059900_v2.0.a1

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0014825
Physical Location & Seq
Forward (+)
4162527 .. 4164501
1975 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G059900.1

Sequence Viewer

Length: 774 bp
ATGGGTGAGCCGTCACCGAGGAATCTGGCTCGATGGGAAGAGTTGGAGGAAGAGAAACCGGATCCGGCGAGGCAAGAGGAGTGGAGTTATGGTGTCGGTGCTCTTTCTTTATGCACCAAGCTCTCAGAGTTGCACACCAAAGCTCCTGAACATAGCTTTGCCTACACGAAGAAAACTATCGAACTAGCGTTTGGCCGCAAGCTCCCGGAGATTTTTGATAATTTTGAAGAGAAACCAGTGAAGCCCATAGTAGTTGCCGTAAAGCTTAGGCATCCTGGTGTTTGTGAATCGATTAGGAGAGATTTCGTTATAATCAATCTGGTAGCAAAAATTTCAAACTTCATTCCTGCTTTAAAGTGGTGGAGATTGGATGAGAGTGTACAGCAGGTTGCAGTTTTTATCATGTCTCAAGTTGATCTTGCAAGGGAAGCTGCCCATTTGTGCATCCTGCTGTTTTGGTGGAAACTTATTAACAAGTTTTGCCTTGTTAGTTTTTCCTTAACAGTTCTGGAGATCCGTTGCATTTATCTTTTTGGGTGTTCCTTATTAAATAAGTTGCAACAAGTGGAGGAGGCATCGGCTTTCTGGGGTACTCCAGAAGGTGATCTGGTCCATCCTGCTGAGTGTATGCAACAGTTACTGGAGAAAGTTAGGCGTCATAGAGTCAATGTCGATGGCAATGTCTGTACTGTCATGGTAACCACTTCGGGATGGCAGCGGAAACTTGATCCCGGGTACAATGTGATGCAAACACTGCTTCTCAAAGCTGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

258

Amino Acids

29.5

Weight (kDa)

6.61

Isoelectric Point (pI)

44.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 311
Acc36I ACCTGC 1 cut(s) 376
AciI CCGC 2 cut(s) 196, 718
AclWI GGATC 4 cut(s) 56, 69, 508, 722
AcoI YGGCCR 1 cut(s) 193
AcsI RAATTY 1 cut(s) 330
AcyI GRCGYC 1 cut(s) 655
AfaI GTAC 4 cut(s) 381, 592, 688, 737
AgsI TTSAA 2 cut(s) 227, 336
AjnI CCWGG 1 cut(s) 274
AjuI GAANNNNNNNTTGG 2 cut(s) 174, 206
AluBI AGCT 7 cut(s) 121, 143, 156, 202, 265, 431, 767
AluI AGCT 7 cut(s) 121, 143, 156, 202, 265, 431, 767
Alw21I GWGCWC 1 cut(s) 103
Alw26I GTCTC 1 cut(s) 411
AlwI GGATC 4 cut(s) 56, 69, 508, 722
AlwNI CAGNNNCTG 1 cut(s) 640
Ama87I CYCGRG 1 cut(s) 731
AoxI GGCC 1 cut(s) 193
ApeKI GCWGC 2 cut(s) 431, 715
ApoI RAATTY 1 cut(s) 330
AspS9I GGNCC 1 cut(s) 610
AsuC2I CCSGG 3 cut(s) 206, 732, 733
AsuHPI GGTGA 3 cut(s) 6, 17, 614
AvaI CYCGRG 1 cut(s) 731
AvaII GGWCC 1 cut(s) 610
BamHI GGATCC 1 cut(s) 61
Bbv12I GWGCWC 1 cut(s) 103
BbvI GCAGC 2 cut(s) 418, 727
BccI CCATC 4 cut(s) 27, 621, 668, 705
BceAI ACGGC 1 cut(s) 242
BciT130I CCWGG 1 cut(s) 276
BcnI CCSGG 3 cut(s) 206, 732, 733
BcoDI GTCTC 1 cut(s) 411
BfaI CTAG 1 cut(s) 185
BfuAI ACCTGC 1 cut(s) 376
BisI GCNGC 3 cut(s) 196, 432, 716
BlsI GCNGC 3 cut(s) 197, 433, 717
Bme1390I CCNGG 4 cut(s) 206, 276, 732, 733
Bme18I GGWCC 1 cut(s) 610
BmeT110I CYCGRG 1 cut(s) 731
BmgT120I GGNCC 1 cut(s) 610
BmiI GGNNCC 1 cut(s) 63
BmrFI CCNGG 4 cut(s) 206, 276, 732, 733
BmsI GCATC 4 cut(s) 280, 453, 584, 735
BpmI CTGGAG 3 cut(s) 530, 579, 662
Bpu10I CCTNAGC 1 cut(s) 266
BpuEI CTTGAG 1 cut(s) 393
BpuMI CCSGG 3 cut(s) 206, 732, 733
Bsa29I ATCGAT 1 cut(s) 290
BsaHI GRCGYC 1 cut(s) 655
BsaJI CCNNGG 2 cut(s) 17, 731
BsaWI WCCGGW 1 cut(s) 58
BsaXI ACNNNNNCTCC 4 cut(s) 76, 106, 127, 157
Bse1I ACTGG 2 cut(s) 236, 645
Bse3DI GCAATG 1 cut(s) 685
BseBI CCWGG 1 cut(s) 276
BseCI ATCGAT 1 cut(s) 290
BseDI CCNNGG 2 cut(s) 17, 731
BseGI GGATG 5 cut(s) 271, 376, 444, 613, 716
BseMI GCAATG 1 cut(s) 685
BseMII CTCAG 2 cut(s) 138, 612
BseNI ACTGG 2 cut(s) 236, 645
BseRI GAGGAG 2 cut(s) 92, 584
BseXI GCAGC 2 cut(s) 418, 727
BshFI GGCC 1 cut(s) 195
BshVI ATCGAT 1 cut(s) 290
BsiHKAI GWGCWC 1 cut(s) 103
BsiHKCI CYCGRG 1 cut(s) 731
BsiSI CCGG 4 cut(s) 59, 65, 206, 732
BsmAI GTCTC 1 cut(s) 411
BsnI GGCC 1 cut(s) 195
BsoBI CYCGRG 1 cut(s) 731
Bsp1286I GDGCHC 1 cut(s) 103
Bsp1407I TGTACA 1 cut(s) 379
Bsp143I GATC 5 cut(s) 61, 415, 513, 604, 727
BspACI CCGC 2 cut(s) 196, 718
BspANI GGCC 1 cut(s) 195
BspCNI CTCAG 2 cut(s) 137, 613
BspDI ATCGAT 1 cut(s) 290
BspLI GGNNCC 1 cut(s) 63
BspMI ACCTGC 1 cut(s) 376
BspPI GGATC 4 cut(s) 56, 69, 508, 722
BsrDI GCAATG 1 cut(s) 685
BsrGI TGTACA 1 cut(s) 379
BsrI ACTGG 2 cut(s) 236, 645
BssECI CCNNGG 2 cut(s) 17, 731
BssMI GATC 5 cut(s) 61, 415, 513, 604, 727
BssNI GRCGYC 1 cut(s) 655
Bst2UI CCWGG 1 cut(s) 276
Bst4CI ACNGT 3 cut(s) 505, 636, 691
Bst6I CTCTTC 3 cut(s) 33, 45, 222
BstACI GRCGYC 1 cut(s) 655
BstAPI GCANNNNNTGC 1 cut(s) 754
BstAUI TGTACA 1 cut(s) 379
BstC8I GCNNGC 1 cut(s) 200
BstDEI CTNAG 3 cut(s) 124, 266, 621
BstEII GGTNACC 1 cut(s) 697
BstF5I GGATG 5 cut(s) 271, 376, 444, 613, 716
BstKTI GATC 5 cut(s) 64, 418, 516, 607, 730
BstMAI GTCTC 1 cut(s) 411
BstMBI GATC 5 cut(s) 61, 415, 513, 604, 727
BstMWI GCNNNNNNNGC 2 cut(s) 428, 754
BstNI CCWGG 1 cut(s) 276
BstPI GGTNACC 1 cut(s) 697
BstSCI CCNGG 4 cut(s) 204, 274, 730, 731
BstV1I GCAGC 2 cut(s) 418, 727
BstX2I RGATCY 2 cut(s) 61, 513
BstYI RGATCY 2 cut(s) 61, 513
Bsu15I ATCGAT 1 cut(s) 290
BsuRI GGCC 1 cut(s) 195
BsuTUI ATCGAT 1 cut(s) 290
BtsCI GGATG 5 cut(s) 271, 376, 444, 613, 716
BtsI GCAGTG 1 cut(s) 752
BtsIMutI CAGTG 2 cut(s) 243, 752
BveI ACCTGC 1 cut(s) 376
Cac8I GCNNGC 1 cut(s) 200
CaiI CAGNNNCTG 1 cut(s) 640
Cfr13I GGNCC 1 cut(s) 610
Cfr9I CCCGGG 1 cut(s) 731
ClaI ATCGAT 1 cut(s) 290
CseI GACGC 1 cut(s) 644
Csp6I GTAC 4 cut(s) 380, 591, 687, 736
CspCI CAANNNNNGTGG 2 cut(s) 62, 97
CviAII CATG 2 cut(s) 403, 694
CviQI GTAC 4 cut(s) 380, 591, 687, 736
DdeI CTNAG 3 cut(s) 124, 266, 621
DpnI GATC 5 cut(s) 63, 417, 515, 606, 729
DpnII GATC 5 cut(s) 61, 415, 513, 604, 727
DraI TTTAAA 1 cut(s) 354
EaeI YGGCCR 1 cut(s) 193
Eam1104I CTCTTC 3 cut(s) 33, 45, 222
EarI CTCTTC 3 cut(s) 33, 45, 222
Eco47I GGWCC 1 cut(s) 610
Eco88I CYCGRG 1 cut(s) 731
Eco91I GGTNACC 1 cut(s) 697
EcoO65I GGTNACC 1 cut(s) 697
EcoRII CCWGG 1 cut(s) 274
FaeI CATG 2 cut(s) 406, 697
FaiI YATR 9 cut(s) 90, 112, 153, 248, 311, 404, 629, 660, 695
FalI AAGNNNNNCTT 2 cut(s) 402, 434
FatI CATG 2 cut(s) 402, 693
Fnu4HI GCNGC 3 cut(s) 196, 432, 716
FokI GGATG 5 cut(s) 258, 383, 431, 600, 723
Fsp4HI GCNGC 3 cut(s) 196, 432, 716
FspBI CTAG 1 cut(s) 185
GluI GCNGC 3 cut(s) 196, 432, 716
GsuI CTGGAG 3 cut(s) 530, 579, 662
HaeIII GGCC 1 cut(s) 195
HapII CCGG 4 cut(s) 59, 65, 206, 732
HgaI GACGC 1 cut(s) 644
Hin1I GRCGYC 1 cut(s) 655
Hin1II CATG 2 cut(s) 406, 697
HindIII AAGCTT 1 cut(s) 263
HinfI GANTC 3 cut(s) 22, 287, 663
HpaII CCGG 4 cut(s) 59, 65, 206, 732
HphI GGTGA 3 cut(s) 6, 17, 614
Hpy166II GTNNAC 1 cut(s) 380
Hpy188I TCNGA 1 cut(s) 127
Hpy188III TCNNGA 4 cut(s) 146, 509, 596, 708
Hpy8I GTNNAC 1 cut(s) 380
HpyAV CCTTC 1 cut(s) 593
HpyCH4III ACNGT 3 cut(s) 505, 636, 691
HpyCH4V TGCA 9 cut(s) 114, 133, 392, 422, 444, 522, 559, 631, 748
HpyF10VI GCNNNNNNNGC 2 cut(s) 428, 754
HpyF3I CTNAG 3 cut(s) 124, 266, 621
Hsp92I GRCGYC 1 cut(s) 655
Hsp92II CATG 2 cut(s) 406, 697
Kzo9I GATC 5 cut(s) 61, 415, 513, 604, 727
LmnI GCTCC 2 cut(s) 148, 207
Lsp1109I GCAGC 2 cut(s) 418, 727
LweI GCATC 4 cut(s) 280, 453, 584, 735
MaeI CTAG 1 cut(s) 185
MaeIII GTNAC 3 cut(s) 12, 636, 697
MalI GATC 5 cut(s) 63, 417, 515, 606, 729
MboI GATC 5 cut(s) 61, 415, 513, 604, 727
MboII GAAGA 4 cut(s) 50, 62, 181, 239
MflI RGATCY 2 cut(s) 61, 513
MhlI GDGCHC 1 cut(s) 103
MluCI AATT 2 cut(s) 220, 330
MlyI GAGTC 1 cut(s) 672
MmeI TCCRAC 1 cut(s) 24
MnlI CCTC 6 cut(s) 12, 40, 63, 70, 562, 565
MseI TTAA 4 cut(s) 353, 471, 500, 548
MslI CAYNNNNRTG 1 cut(s) 276
MspA1I CMGCKG 1 cut(s) 718
MspI CCGG 4 cut(s) 59, 65, 206, 732
MspR9I CCNGG 4 cut(s) 206, 276, 732, 733
MvaI CCWGG 1 cut(s) 276
MwoI GCNNNNNNNGC 2 cut(s) 428, 754
NciI CCSGG 3 cut(s) 206, 732, 733
NdeII GATC 5 cut(s) 61, 415, 513, 604, 727
NlaIII CATG 2 cut(s) 406, 697
NlaIV GGNNCC 1 cut(s) 63
NmuCI GTSAC 1 cut(s) 12
PfeI GAWTC 2 cut(s) 22, 287
PfoI TCCNGGA 1 cut(s) 204
PkrI GCNGC 3 cut(s) 197, 433, 717
PleI GAGTC 1 cut(s) 671
PpsI GAGTC 1 cut(s) 671
PsiI TTATAA 1 cut(s) 311
Psp6I CCWGG 1 cut(s) 274
PspEI GGTNACC 1 cut(s) 697
PspGI CCWGG 1 cut(s) 274
PspN4I GGNNCC 1 cut(s) 63
PspPI GGNCC 1 cut(s) 610
PstNI CAGNNNCTG 1 cut(s) 640
PsuI RGATCY 2 cut(s) 61, 513
RsaI GTAC 4 cut(s) 381, 592, 688, 737
RsaNI GTAC 4 cut(s) 380, 591, 687, 736
RseI CAYNNNNRTG 1 cut(s) 276
SaqAI TTAA 4 cut(s) 353, 471, 500, 548
SatI GCNGC 3 cut(s) 196, 432, 716
Sau3AI GATC 5 cut(s) 61, 415, 513, 604, 727
Sau96I GGNCC 1 cut(s) 610
SchI GAGTC 1 cut(s) 672
ScrFI CCNGG 4 cut(s) 206, 276, 732, 733
SduI GDGCHC 1 cut(s) 103
SetI ASST 9 cut(s) 123, 145, 158, 204, 267, 390, 433, 604, 769
SfaNI GCATC 4 cut(s) 280, 453, 584, 735
SinI GGWCC 1 cut(s) 610
SmaI CCCGGG 1 cut(s) 733
SmiMI CAYNNNNRTG 1 cut(s) 276
SmlI CTYRAG 1 cut(s) 408
SmoI CTYRAG 1 cut(s) 408
Sse9I AATT 2 cut(s) 220, 330
SsiI CCGC 2 cut(s) 196, 718
SspMI CTAG 1 cut(s) 185
StyD4I CCNGG 4 cut(s) 204, 274, 730, 731
TaaI ACNGT 3 cut(s) 505, 636, 691
TaqI TCGA 4 cut(s) 31, 180, 290, 672
TasI AATT 2 cut(s) 220, 330
TatI WGTACW 2 cut(s) 379, 686
TauI GCSGC 1 cut(s) 198
TfiI GAWTC 2 cut(s) 22, 287
Tru1I TTAA 4 cut(s) 353, 471, 500, 548
Tru9I TTAA 4 cut(s) 353, 471, 500, 548
TscAI CASTG 2 cut(s) 243, 759
TseFI GTSAC 1 cut(s) 12
TseI GCWGC 2 cut(s) 431, 715
Tsp45I GTSAC 1 cut(s) 12
TspDTI ATGAA 1 cut(s) 331
TspGWI ACGGA 1 cut(s) 506
TspMI CCCGGG 1 cut(s) 731
TspRI CASTG 2 cut(s) 243, 759
VpaK11BI GGWCC 1 cut(s) 610
XapI RAATTY 1 cut(s) 330
XmaI CCCGGG 1 cut(s) 731
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.