cytosolic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11040 AT3G11040 AT3G11040 AT3G61010 AT3G61010 AT3G61010 AT5G05460 |
| fragaria_vesca | FvH4_7g25120 FvH4_7g25120 FvH4_7g25120 FvH4_7g25120 |
| malus_domestica | MD01G1158000.v1.1 MD07G1226700.v1.1 |
| prunus_persica | Prupe.2G256300_v2.0.a1 |
| pyrus_communis | pycom01g17460 pycom01g17470 pycom07g20530 |
| rosa_chinensis | RchiOBHm_Chr1g0370971 |
| rosa_laevigata | RLG00000026994 |
| rosa_multiflora | Rmu_sc0001018.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00286070 |
| rosa_rugosa | Rorug01G0360400 |
| rosa_samantha | Rh1AG370800 Rh1BG334400 Rh1CG347700 Rh1DG365600 |
| rosa_wichuraiana | Rw1G032630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1962 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 377, 2078 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 349 |
| AccI | GTMKAC | 2 cut(s) | 930, 1274 |
| AccII | CGCG | 1 cut(s) | 2028 |
| AciI | CCGC | 2 cut(s) | 186, 2133 |
| AclWI | GGATC | 2 cut(s) | 1058, 1891 |
| AcoI | YGGCCR | 1 cut(s) | 1999 |
| AcsI | RAATTY | 5 cut(s) | 1075, 1168, 1565, 1703, 1723 |
| AcuI | CTGAAG | 2 cut(s) | 91, 1529 |
| AcvI | CACGTG | 1 cut(s) | 1920 |
| AfaI | GTAC | 4 cut(s) | 99, 203, 1527, 2092 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 349, 1620, 1621 |
| AflII | CTTAAG | 1 cut(s) | 1910 |
| AflIII | ACRYGT | 1 cut(s) | 1586 |
| AjiI | CACGTC | 1 cut(s) | 1589 |
| AjnI | CCWGG | 5 cut(s) | 745, 1042, 1603, 1615, 2005 |
| AluBI | AGCT | 6 cut(s) | 226, 622, 899, 2057, 2149, 2186 |
| AluI | AGCT | 6 cut(s) | 226, 622, 899, 2057, 2149, 2186 |
| Alw21I | GWGCWC | 1 cut(s) | 228 |
| Alw26I | GTCTC | 3 cut(s) | 52, 906, 1711 |
| AlwI | GGATC | 2 cut(s) | 1058, 1891 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1546, 1700 |
| Ama87I | CYCGRG | 2 cut(s) | 227, 2046 |
| AoxI | GGCC | 6 cut(s) | 323, 1104, 1180, 1480, 1738, 1999 |
| ApaI | GGGCCC | 1 cut(s) | 1108 |
| ApeKI | GCWGC | 2 cut(s) | 310, 313 |
| ApoI | RAATTY | 5 cut(s) | 1075, 1168, 1565, 1703, 1723 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 143 |
| AspLEI | GCGC | 1 cut(s) | 2028 |
| AspS9I | GGNCC | 8 cut(s) | 237, 379, 486, 742, 1104, 1105, 1180, 1306 |
| AsuC2I | CCSGG | 1 cut(s) | 235 |
| AsuHPI | GGTGA | 1 cut(s) | 68 |
| AvaI | CYCGRG | 2 cut(s) | 227, 2046 |
| AvaII | GGWCC | 5 cut(s) | 237, 379, 486, 742, 1306 |
| BaeGI | GKGCMC | 1 cut(s) | 1108 |
| BalI | TGGCCA | 1 cut(s) | 2001 |
| BanII | GRGCYC | 3 cut(s) | 161, 228, 1108 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 866, 898 |
| BbrPI | CACGTG | 1 cut(s) | 1920 |
| BbsI | GAAGAC | 3 cut(s) | 8, 294, 1380 |
| Bbv12I | GWGCWC | 1 cut(s) | 228 |
| BbvI | GCAGC | 2 cut(s) | 297, 300 |
| BceAI | ACGGC | 2 cut(s) | 173, 510 |
| BciT130I | CCWGG | 5 cut(s) | 747, 1044, 1605, 1617, 2007 |
| BciVI | GTATCC | 2 cut(s) | 1649, 2170 |
| BclI | TGATCA | 2 cut(s) | 654, 1174 |
| BcnI | CCSGG | 1 cut(s) | 235 |
| BcoDI | GTCTC | 3 cut(s) | 52, 906, 1711 |
| BfaI | CTAG | 4 cut(s) | 134, 1478, 1982, 2018 |
| BfmI | CTRYAG | 2 cut(s) | 579, 1878 |
| BfrI | CTTAAG | 1 cut(s) | 1910 |
| BfuI | GTATCC | 2 cut(s) | 1649, 2170 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 322 |
| BglII | AGATCT | 1 cut(s) | 1411 |
| BisI | GCNGC | 2 cut(s) | 311, 314 |
| BlsI | GCNGC | 2 cut(s) | 312, 315 |
| BmcAI | AGTACT | 1 cut(s) | 1527 |
| Bme1390I | CCNGG | 6 cut(s) | 235, 747, 1044, 1605, 1617, 2007 |
| Bme18I | GGWCC | 5 cut(s) | 237, 379, 486, 742, 1306 |
| BmeT110I | CYCGRG | 2 cut(s) | 227, 2046 |
| BmgBI | CACGTC | 1 cut(s) | 1589 |
| BmgT120I | GGNCC | 8 cut(s) | 237, 379, 486, 742, 1104, 1105, 1180, 1306 |
| BmiI | GGNNCC | 5 cut(s) | 238, 380, 744, 1106, 1894 |
| BmrFI | CCNGG | 6 cut(s) | 235, 747, 1044, 1605, 1617, 2007 |
| BmsI | GCATC | 3 cut(s) | 1213, 1337, 1981 |
| BpiI | GAAGAC | 3 cut(s) | 8, 294, 1380 |
| BpmI | CTGGAG | 2 cut(s) | 930, 1275 |
| BpuEI | CTTGAG | 2 cut(s) | 1289, 1543 |
| BpuMI | CCSGG | 1 cut(s) | 235 |
| BsaAI | YACGTR | 1 cut(s) | 1920 |
| BsaJI | CCNNGG | 9 cut(s) | 276, 382, 738, 745, 1183, 1229, 1249, 1615, 1996 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 656, 686, 1200, 1230 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 349, 1620, 1621 |
| Bse1I | ACTGG | 1 cut(s) | 803 |
| BseBI | CCWGG | 5 cut(s) | 747, 1044, 1605, 1617, 2007 |
| BseDI | CCNNGG | 9 cut(s) | 276, 382, 738, 745, 1183, 1229, 1249, 1615, 1996 |
| BseGI | GGATG | 9 cut(s) | 30, 358, 439, 550, 653, 1021, 1052, 1625, 2002 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 349, 1620, 1621 |
| BseMII | CTCAG | 3 cut(s) | 79, 1103, 1772 |
| BseNI | ACTGG | 1 cut(s) | 803 |
| BseRI | GAGGAG | 2 cut(s) | 53, 1356 |
| BseSI | GKGCMC | 1 cut(s) | 1108 |
| BseXI | GCAGC | 2 cut(s) | 297, 300 |
| BseYI | CCCAGC | 1 cut(s) | 180 |
| Bsh1236I | CGCG | 1 cut(s) | 2028 |
| BshFI | GGCC | 6 cut(s) | 325, 1106, 1182, 1482, 1740, 2001 |
| BsiHKAI | GWGCWC | 1 cut(s) | 228 |
| BsiHKCI | CYCGRG | 2 cut(s) | 227, 2046 |
| BsiSI | CCGG | 1 cut(s) | 234 |
| BslFI | GGGAC | 3 cut(s) | 403, 728, 2066 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 349, 1620, 1621 |
| BsmAI | GTCTC | 3 cut(s) | 52, 906, 1711 |
| BsmBI | CGTCTC | 1 cut(s) | 52 |
| BsmFI | GGGAC | 3 cut(s) | 403, 728, 2066 |
| BsmI | GAATGC | 4 cut(s) | 406, 733, 1299, 1949 |
| BsnI | GGCC | 6 cut(s) | 325, 1106, 1182, 1482, 1740, 2001 |
| BsoBI | CYCGRG | 2 cut(s) | 227, 2046 |
| Bsp120I | GGGCCC | 1 cut(s) | 1104 |
| Bsp1286I | GDGCHC | 3 cut(s) | 161, 228, 1108 |
| Bsp143I | GATC | 8 cut(s) | 130, 654, 805, 1050, 1174, 1411, 1883, 1914 |
| Bsp19I | CCATGG | 1 cut(s) | 1183 |
| BspACI | CCGC | 2 cut(s) | 186, 2133 |
| BspANI | GGCC | 6 cut(s) | 325, 1106, 1182, 1482, 1740, 2001 |
| BspCNI | CTCAG | 3 cut(s) | 78, 1102, 1771 |
| BspFNI | CGCG | 1 cut(s) | 2028 |
| BspLI | GGNNCC | 5 cut(s) | 238, 380, 744, 1106, 1894 |
| BspPI | GGATC | 2 cut(s) | 1058, 1891 |
| BspQI | GCTCTTC | 1 cut(s) | 216 |
| BspTI | CTTAAG | 1 cut(s) | 1910 |
| BsrI | ACTGG | 1 cut(s) | 803 |
| BssECI | CCNNGG | 9 cut(s) | 276, 382, 738, 745, 1183, 1229, 1249, 1615, 1996 |
| BssMI | GATC | 8 cut(s) | 130, 654, 805, 1050, 1174, 1411, 1883, 1914 |
| BssNAI | GTATAC | 1 cut(s) | 1275 |
| BssT1I | CCWWGG | 3 cut(s) | 382, 1183, 1249 |
| Bst1107I | GTATAC | 1 cut(s) | 1275 |
| Bst2UI | CCWGG | 5 cut(s) | 747, 1044, 1605, 1617, 2007 |
| Bst4CI | ACNGT | 2 cut(s) | 168, 509 |
| Bst6I | CTCTTC | 5 cut(s) | 107, 216, 474, 579, 1504 |
| BstAFI | CTTAAG | 1 cut(s) | 1910 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 730, 1991 |
| BstBAI | YACGTR | 1 cut(s) | 1920 |
| BstC8I | GCNNGC | 3 cut(s) | 186, 554, 624 |
| BstDEI | CTNAG | 6 cut(s) | 65, 606, 1089, 1758, 1887, 1904 |
| BstDSI | CCRYGG | 3 cut(s) | 1183, 1229, 1996 |
| BstF5I | GGATG | 9 cut(s) | 30, 358, 439, 550, 653, 1021, 1052, 1625, 2002 |
| BstFNI | CGCG | 1 cut(s) | 2028 |
| BstHHI | GCGC | 1 cut(s) | 2028 |
| BstKTI | GATC | 8 cut(s) | 133, 657, 808, 1053, 1177, 1414, 1886, 1917 |
| BstMAI | GTCTC | 3 cut(s) | 52, 906, 1711 |
| BstMBI | GATC | 8 cut(s) | 130, 654, 805, 1050, 1174, 1411, 1883, 1914 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 190, 223, 281, 322, 730, 905, 1037, 1991, 2139 |
| BstNI | CCWGG | 5 cut(s) | 747, 1044, 1605, 1617, 2007 |
| BstSCI | CCNGG | 6 cut(s) | 233, 745, 1042, 1603, 1615, 2005 |
| BstSFI | CTRYAG | 2 cut(s) | 579, 1878 |
| BstSLI | GKGCMC | 1 cut(s) | 1108 |
| BstUI | CGCG | 1 cut(s) | 2028 |
| BstV1I | GCAGC | 2 cut(s) | 297, 300 |
| BstV2I | GAAGAC | 3 cut(s) | 8, 294, 1380 |
| BstX2I | RGATCY | 3 cut(s) | 1050, 1411, 1883 |
| BstYI | RGATCY | 3 cut(s) | 1050, 1411, 1883 |
| BstZ17I | GTATAC | 1 cut(s) | 1275 |
| BsuI | GTATCC | 2 cut(s) | 1649, 2170 |
| BsuRI | GGCC | 6 cut(s) | 325, 1106, 1182, 1482, 1740, 2001 |
| BtgI | CCRYGG | 3 cut(s) | 1183, 1229, 1996 |
| BtrI | CACGTC | 1 cut(s) | 1589 |
| BtsCI | GGATG | 9 cut(s) | 30, 358, 439, 550, 653, 1021, 1052, 1625, 2002 |
| BtsI | GCAGTG | 1 cut(s) | 1788 |
| BtsIMutI | CAGTG | 1 cut(s) | 1788 |
| Cac8I | GCNNGC | 3 cut(s) | 186, 554, 624 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1546, 1700 |
| CfoI | GCGC | 1 cut(s) | 2028 |
| Cfr13I | GGNCC | 8 cut(s) | 237, 379, 486, 742, 1104, 1105, 1180, 1306 |
| CseI | GACGC | 3 cut(s) | 223, 285, 730 |
| Csp6I | GTAC | 4 cut(s) | 98, 202, 1526, 2091 |
| CviAII | CATG | 8 cut(s) | 344, 349, 480, 870, 934, 1122, 1184, 1648 |
| CviQI | GTAC | 4 cut(s) | 98, 202, 1526, 2091 |
| DdeI | CTNAG | 6 cut(s) | 65, 606, 1089, 1758, 1887, 1904 |
| DpnI | GATC | 8 cut(s) | 132, 656, 807, 1052, 1176, 1413, 1885, 1916 |
| DpnII | GATC | 8 cut(s) | 130, 654, 805, 1050, 1174, 1411, 1883, 1914 |
| DraI | TTTAAA | 1 cut(s) | 1360 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 377, 2078 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 377, 2078 |
| EaeI | YGGCCR | 1 cut(s) | 1999 |
| Eam1104I | CTCTTC | 5 cut(s) | 107, 216, 474, 579, 1504 |
| EarI | CTCTTC | 5 cut(s) | 107, 216, 474, 579, 1504 |
| Ecl136II | GAGCTC | 1 cut(s) | 226 |
| Eco130I | CCWWGG | 3 cut(s) | 382, 1183, 1249 |
| Eco147I | AGGCCT | 1 cut(s) | 1482 |
| Eco24I | GRGCYC | 3 cut(s) | 161, 228, 1108 |
| Eco32I | GATATC | 1 cut(s) | 1190 |
| Eco47I | GGWCC | 5 cut(s) | 237, 379, 486, 742, 1306 |
| Eco53kI | GAGCTC | 1 cut(s) | 226 |
| Eco57I | CTGAAG | 2 cut(s) | 91, 1529 |
| Eco72I | CACGTG | 1 cut(s) | 1920 |
| Eco88I | CYCGRG | 2 cut(s) | 227, 2046 |
| EcoICRI | GAGCTC | 1 cut(s) | 226 |
| EcoO109I | RGGNCCY | 2 cut(s) | 237, 1105 |
| EcoRII | CCWGG | 5 cut(s) | 745, 1042, 1603, 1615, 2005 |
| EcoRV | GATATC | 1 cut(s) | 1190 |
| EcoT14I | CCWWGG | 3 cut(s) | 382, 1183, 1249 |
| EcoT22I | ATGCAT | 2 cut(s) | 735, 1951 |
| EcoT38I | GRGCYC | 3 cut(s) | 161, 228, 1108 |
| ErhI | CCWWGG | 3 cut(s) | 382, 1183, 1249 |
| Esp3I | CGTCTC | 1 cut(s) | 52 |
| FaeI | CATG | 8 cut(s) | 347, 352, 483, 873, 937, 1125, 1187, 1651 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 540, 572, 1353, 1385, 1398, 1430 |
| FaqI | GGGAC | 3 cut(s) | 403, 728, 2066 |
| FatI | CATG | 8 cut(s) | 343, 348, 479, 869, 933, 1121, 1183, 1647 |
| FauI | CCCGC | 2 cut(s) | 193, 2126 |
| FbaI | TGATCA | 2 cut(s) | 654, 1174 |
| FblI | GTMKAC | 2 cut(s) | 930, 1274 |
| Fnu4HI | GCNGC | 2 cut(s) | 311, 314 |
| FokI | GGATG | 9 cut(s) | 17, 365, 446, 557, 660, 1028, 1059, 1632, 1989 |
| FriOI | GRGCYC | 3 cut(s) | 161, 228, 1108 |
| Fsp4HI | GCNGC | 2 cut(s) | 311, 314 |
| FspBI | CTAG | 4 cut(s) | 134, 1478, 1982, 2018 |
| GlaI | GCGC | 1 cut(s) | 2027 |
| GluI | GCNGC | 2 cut(s) | 311, 314 |
| GsaI | CCCAGC | 1 cut(s) | 184 |
| GsuI | CTGGAG | 2 cut(s) | 930, 1275 |
| HaeIII | GGCC | 6 cut(s) | 325, 1106, 1182, 1482, 1740, 2001 |
| HapII | CCGG | 1 cut(s) | 234 |
| HgaI | GACGC | 3 cut(s) | 223, 285, 730 |
| HhaI | GCGC | 1 cut(s) | 2028 |
| Hin1II | CATG | 8 cut(s) | 347, 352, 483, 873, 937, 1125, 1187, 1651 |
| Hin6I | GCGC | 1 cut(s) | 2026 |
| HinP1I | GCGC | 1 cut(s) | 2026 |
| HincII | GTYRAC | 1 cut(s) | 1592 |
| HindII | GTYRAC | 1 cut(s) | 1592 |
| HindIII | AAGCTT | 2 cut(s) | 2055, 2184 |
| HinfI | GANTC | 7 cut(s) | 230, 248, 587, 852, 1093, 1762, 2156 |
| HpaII | CCGG | 1 cut(s) | 234 |
| HphI | GGTGA | 1 cut(s) | 68 |
| Hpy166II | GTNNAC | 6 cut(s) | 791, 862, 931, 974, 1275, 1592 |
| Hpy188III | TCNNGA | 3 cut(s) | 134, 211, 1292 |
| Hpy8I | GTNNAC | 6 cut(s) | 791, 862, 931, 974, 1275, 1592 |
| Hpy99I | CGWCG | 1 cut(s) | 301 |
| HpyAV | CCTTC | 7 cut(s) | 542, 948, 1504, 1730, 1845, 1850, 2094 |
| HpyCH4III | ACNGT | 2 cut(s) | 168, 509 |
| HpyCH4IV | ACGT | 2 cut(s) | 1588, 1919 |
| HpyCH4V | TGCA | 7 cut(s) | 564, 733, 995, 1236, 1394, 1781, 1949 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 190, 223, 281, 322, 730, 905, 1037, 1991, 2139 |
| HpyF3I | CTNAG | 6 cut(s) | 65, 606, 1089, 1758, 1887, 1904 |
| HpySE526I | ACGT | 2 cut(s) | 1588, 1919 |
| Hsp92II | CATG | 8 cut(s) | 347, 352, 483, 873, 937, 1125, 1187, 1651 |
| HspAI | GCGC | 1 cut(s) | 2026 |
| Ksp22I | TGATCA | 2 cut(s) | 654, 1174 |
| Kzo9I | GATC | 8 cut(s) | 130, 654, 805, 1050, 1174, 1411, 1883, 1914 |
| LguI | GCTCTTC | 1 cut(s) | 216 |
| LmnI | GCTCC | 6 cut(s) | 26, 157, 619, 1045, 1231, 2009 |
| Lsp1109I | GCAGC | 2 cut(s) | 297, 300 |
| LweI | GCATC | 3 cut(s) | 1213, 1337, 1981 |
| MaeI | CTAG | 4 cut(s) | 134, 1478, 1982, 2018 |
| MaeII | ACGT | 2 cut(s) | 1588, 1919 |
| MaeIII | GTNAC | 3 cut(s) | 463, 775, 1637 |
| MalI | GATC | 8 cut(s) | 132, 656, 807, 1052, 1176, 1413, 1885, 1916 |
| MboI | GATC | 8 cut(s) | 130, 654, 805, 1050, 1174, 1411, 1883, 1914 |
| MfeI | CAATTG | 1 cut(s) | 1800 |
| MflI | RGATCY | 3 cut(s) | 1050, 1411, 1883 |
| MhlI | GDGCHC | 3 cut(s) | 161, 228, 1108 |
| MlsI | TGGCCA | 1 cut(s) | 2001 |
| MluNI | TGGCCA | 1 cut(s) | 2001 |
| MlyI | GAGTC | 3 cut(s) | 239, 257, 596 |
| MmeI | TCCRAC | 2 cut(s) | 464, 1790 |
| Mox20I | TGGCCA | 1 cut(s) | 2001 |
| Mph1103I | ATGCAT | 2 cut(s) | 735, 1951 |
| MroXI | GAANNNNTTC | 1 cut(s) | 143 |
| MscI | TGGCCA | 1 cut(s) | 2001 |
| MseI | TTAA | 8 cut(s) | 57, 513, 795, 1359, 1491, 1569, 1664, 1911 |
| MslI | CAYNNNNRTG | 2 cut(s) | 478, 1646 |
| Msp20I | TGGCCA | 1 cut(s) | 2001 |
| MspA1I | CMGCKG | 1 cut(s) | 899 |
| MspCI | CTTAAG | 1 cut(s) | 1910 |
| MspI | CCGG | 1 cut(s) | 234 |
| MspR9I | CCNGG | 6 cut(s) | 235, 747, 1044, 1605, 1617, 2007 |
| MunI | CAATTG | 1 cut(s) | 1800 |
| Mva1269I | GAATGC | 4 cut(s) | 406, 733, 1299, 1949 |
| MvaI | CCWGG | 5 cut(s) | 747, 1044, 1605, 1617, 2007 |
| MvnI | CGCG | 1 cut(s) | 2028 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 190, 223, 281, 322, 730, 905, 1037, 1991, 2139 |
| NciI | CCSGG | 1 cut(s) | 235 |
| NcoI | CCATGG | 1 cut(s) | 1183 |
| NdeII | GATC | 8 cut(s) | 130, 654, 805, 1050, 1174, 1411, 1883, 1914 |
| NlaIII | CATG | 8 cut(s) | 347, 352, 483, 873, 937, 1125, 1187, 1651 |
| NlaIV | GGNNCC | 5 cut(s) | 238, 380, 744, 1106, 1894 |
| NmeAIII | GCCGAG | 1 cut(s) | 351 |
| NsiI | ATGCAT | 2 cut(s) | 735, 1951 |
| PaeR7I | CTCGAG | 2 cut(s) | 227, 2046 |
| PceI | AGGCCT | 1 cut(s) | 1482 |
| PciSI | GCTCTTC | 1 cut(s) | 216 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 225 |
| PctI | GAATGC | 4 cut(s) | 406, 733, 1299, 1949 |
| PdmI | GAANNNNTTC | 1 cut(s) | 143 |
| PfeI | GAWTC | 4 cut(s) | 852, 1093, 1762, 2156 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 349 |
| PfoI | TCCNGGA | 2 cut(s) | 1042, 2005 |
| PkrI | GCNGC | 2 cut(s) | 312, 315 |
| PleI | GAGTC | 3 cut(s) | 238, 256, 595 |
| PmaCI | CACGTG | 1 cut(s) | 1920 |
| PmlI | CACGTG | 1 cut(s) | 1920 |
| PpsI | GAGTC | 3 cut(s) | 238, 256, 595 |
| Ppu21I | YACGTR | 1 cut(s) | 1920 |
| PpuMI | RGGWCCY | 1 cut(s) | 237 |
| PsiI | TTATAA | 1 cut(s) | 1962 |
| Psp124BI | GAGCTC | 1 cut(s) | 228 |
| Psp5II | RGGWCCY | 1 cut(s) | 237 |
| Psp6I | CCWGG | 5 cut(s) | 745, 1042, 1603, 1615, 2005 |
| PspCI | CACGTG | 1 cut(s) | 1920 |
| PspFI | CCCAGC | 1 cut(s) | 180 |
| PspGI | CCWGG | 5 cut(s) | 745, 1042, 1603, 1615, 2005 |
| PspN4I | GGNNCC | 5 cut(s) | 238, 380, 744, 1106, 1894 |
| PspOMI | GGGCCC | 1 cut(s) | 1104 |
| PspPI | GGNCC | 8 cut(s) | 237, 379, 486, 742, 1104, 1105, 1180, 1306 |
| PspPPI | RGGWCCY | 1 cut(s) | 237 |
| PspXI | VCTCGAGB | 2 cut(s) | 227, 2046 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1546, 1700 |
| PsuI | RGATCY | 3 cut(s) | 1050, 1411, 1883 |
| PvuII | CAGCTG | 1 cut(s) | 899 |
| RsaI | GTAC | 4 cut(s) | 99, 203, 1527, 2092 |
| RsaNI | GTAC | 4 cut(s) | 98, 202, 1526, 2091 |
| RseI | CAYNNNNRTG | 2 cut(s) | 478, 1646 |
| SacI | GAGCTC | 1 cut(s) | 228 |
| SapI | GCTCTTC | 1 cut(s) | 216 |
| SaqAI | TTAA | 8 cut(s) | 57, 513, 795, 1359, 1491, 1569, 1664, 1911 |
| SatI | GCNGC | 2 cut(s) | 311, 314 |
| Sau3AI | GATC | 8 cut(s) | 130, 654, 805, 1050, 1174, 1411, 1883, 1914 |
| Sau96I | GGNCC | 8 cut(s) | 237, 379, 486, 742, 1104, 1105, 1180, 1306 |
| ScaI | AGTACT | 1 cut(s) | 1527 |
| SchI | GAGTC | 3 cut(s) | 239, 257, 596 |
| ScrFI | CCNGG | 6 cut(s) | 235, 747, 1044, 1605, 1617, 2007 |
| SduI | GDGCHC | 3 cut(s) | 161, 228, 1108 |
| SfaNI | GCATC | 3 cut(s) | 1213, 1337, 1981 |
| SfcI | CTRYAG | 2 cut(s) | 579, 1878 |
| Sfr274I | CTCGAG | 2 cut(s) | 227, 2046 |
| SinI | GGWCC | 5 cut(s) | 237, 379, 486, 742, 1306 |
| SlaI | CTCGAG | 2 cut(s) | 227, 2046 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 478, 1646 |
| SmlI | CTYRAG | 5 cut(s) | 227, 1268, 1558, 1910, 2046 |
| SmoI | CTYRAG | 5 cut(s) | 227, 1268, 1558, 1910, 2046 |
| SseBI | AGGCCT | 1 cut(s) | 1482 |
| SsiI | CCGC | 2 cut(s) | 186, 2133 |
| SspI | AATATT | 1 cut(s) | 1966 |
| SspMI | CTAG | 4 cut(s) | 134, 1478, 1982, 2018 |
| SstI | GAGCTC | 1 cut(s) | 228 |
| StuI | AGGCCT | 1 cut(s) | 1482 |
| StyD4I | CCNGG | 6 cut(s) | 233, 745, 1042, 1603, 1615, 2005 |
| StyI | CCWWGG | 3 cut(s) | 382, 1183, 1249 |
| TaaI | ACNGT | 2 cut(s) | 168, 509 |
| TaiI | ACGT | 2 cut(s) | 1591, 1922 |
| TaqI | TCGA | 9 cut(s) | 171, 219, 228, 246, 398, 642, 680, 1854, 2047 |
| TaqII | GACCGA | 1 cut(s) | 730 |
| TatI | WGTACW | 1 cut(s) | 1525 |
| TfiI | GAWTC | 4 cut(s) | 852, 1093, 1762, 2156 |
| Tru1I | TTAA | 8 cut(s) | 57, 513, 795, 1359, 1491, 1569, 1664, 1911 |
| Tru9I | TTAA | 8 cut(s) | 57, 513, 795, 1359, 1491, 1569, 1664, 1911 |
| TscAI | CASTG | 1 cut(s) | 1788 |
| TseI | GCWGC | 2 cut(s) | 310, 313 |
| TspDTI | ATGAA | 6 cut(s) | 430, 520, 561, 831, 1071, 1725 |
| TspGWI | ACGGA | 4 cut(s) | 23, 551, 632, 1218 |
| TspRI | CASTG | 1 cut(s) | 1788 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 349 |
| Vha464I | CTTAAG | 1 cut(s) | 1910 |
| VpaK11BI | GGWCC | 5 cut(s) | 237, 379, 486, 742, 1306 |
| XapI | RAATTY | 5 cut(s) | 1075, 1168, 1565, 1703, 1723 |
| XbaI | TCTAGA | 1 cut(s) | 133 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 350, 480 |
| XhoI | CTCGAG | 2 cut(s) | 227, 2046 |
| XmiI | GTMKAC | 2 cut(s) | 930, 1274 |
| XmnI | GAANNNNTTC | 1 cut(s) | 143 |
| XspI | CTAG | 4 cut(s) | 134, 1478, 1982, 2018 |
| ZrmI | AGTACT | 1 cut(s) | 1527 |
| Zsp2I | ATGCAT | 2 cut(s) | 735, 1951 |