Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0006100

Physical Location & Seq

Genomic Coordinates Reverse (-)

62453969 .. 62460355

Gene Structure 6387 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG347700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGATTCTTCGTCTTCTTCGTGCCTACATCAGCCGCGAAACCCTAGCCTCTCTCCTCAAACCCCTCAGACTAGTGCACCGCAAAGTCCGAACCTTTTTCCTCTTCTTCAAAATGTCCCAACCCACCTCTCCACAGTCCTCCGCCCCAACCCCTCCACCATTCGACCCGACCCGGCCCTCCATACCCATCTCGTACCCGATCAAAACCCTGGAAGAGCTCGAATCCCGATCCTACTTCGACTCCTTCCACTACCCCTTTAACAAATCCTCCGTGGCTCTCCCATCTGGGCCGTCGGGTCTGCCCAATCGGCCCAGATTGCTGGTCTGCCATGACATGGCTGGTGGCTATGGAGATGATAGGTGGATCCAAGGAGGGACGAATCCGAATGCGTATTCGATATGGCACTGGTATTTGATTGATATCTTCATCTACTTTTCGCATAGTCTTGTGGCTCTTCCACCTCCTTGTTGGACTAACACGGCTCATAAGCATGGTGTTAAGGTGTTGGGGACTTTCATCACAGAATGGGATGAAGGGAAACTTATATGCAACAAATTGCTGTCTACAAAAGAGTCTGCGGAGATGTATGCTGAGCGTTTGGTAGAGCTTGCTGTTGCTTTGGGCTTCGATGGATGGCTGATCAATATGGAAGTTGAATTGGAATTGGGCCAAATTCCTAATTTGAAAGCATTTGTCAGCCACTTAACCCAGAGAATGCATTCCTCAGTCCCTGGATCTTTAGTGATATGGTATGATAGTGTTACAACTGACGGTAAACTTAACTGGCAAAACCAACTAAATGAAAAGAATAAGCCATTCTTTGATATATCTGACGGAATTTTCGTGAACTATACATGGAAGCAAAATTATCCGAAGCAATCAGCTGCTGTTGCAGGTGATAGAAAGTTTGATGTATATATGGGTATTGATGTATTTGGAAGGGGCACTTTCGGTGGTGGACAATGGAATGCAAGTGTTGCACTTGATATGCTGAAAAATGATGATGTGTCAGCTGCCATATTTGCTCCTGGATGGATCTATGAGACTAATCAACCACCTAACTTCCAGAATGCTCAGAATCATTGGTGGGCCCTTGTGGAAAAATCCTGGGGAATAACACAGAATTATCCTACTGTTCTACCATTCTATTCAAATTTTGATCAGGGTCATGGATACCATGTTTCTGTTGAAGGCGAGGAAGTATCAGATGCTTCTTGGTGTAACATTTCTTCCCAAAGTTTTCAGCCTTTGCTTCTGTTCACTGATAATTCAACTCCAGATGGTATTCAGGTCCATGTTGATTTCAGGGAAGCATCTTACAGTGGAGGAGGAAACATCACATTTAAAGGAAACCTTGAAGACAATGCTGATTTCACTGCAAGGCTCTTTCAAGGAGATCTTCTTTTGGGGGACTTGCCTCTTCACTTCGTATATTCAGTGAAATCGGAGAATAATTCTCGACTAGGCCTTTTTCTTAATTTCGTTTCTACTCTAAACAAAAAAAAGTCGGTACTTCTTGTATCCTGGAATTCGAACCAATTCTCAAGCAAATTTAGTACAGTGATTAGGACACGTCAACTTGAAAGACCAGGAACTGCCCCTGGATGGGTTATAGAGGAGAGTAGCATCAGAATGAAGGGATGCAGACTAACTGAAATACATGCGGTGTGCTACAGGTCAAAGCCTGAGTTTGATGAAAAGATACCAAAATCCAAAACTAGCCAAGATAATTCTTGTGCTCATAATTCAACGGAGTACTATGCAGTGCTTGGTCATATTTCAATGAAATCTTGTGGACAAAATTCAGATTTTCCACCTTCCGATTCATGGCTTGTCCAAGGTCAATTCATCCAATGGACTACAGGATCTGAGGATTCCAAGTACCTTAGTCTTAAGATCGCTTGGAAATTGAAAGATGGGAATGATTCTGCATACTCAACCTATAACATTTATGTTGAGAAACTAGCAGAAGGAAAACCAAGAGGAGGACACTCCTATCTTGGAGTGGCTAGAGTGGAAGCTTTTTATGTTTATGACCTGGCAGTTCCTTCTGACACTTCTACCATCAAGTTCATTATTCAAGTGTGTGGTGGTGATGGGAGTAGCCAGAAACTAGATGACTCTCCGGTTTTTCTGTTGGATACTGAAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000270 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0004563 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005975 GO:0006022 GO:0006026 GO:0006027 GO:0006464 GO:0006491 GO:0006517 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009100 GO:0009253 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0015929 GO:0016052 GO:0016231 GO:0016787 GO:0016798 GO:0019538 GO:0030203 GO:0033925 GO:0035821 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044033 GO:0044035 GO:0044040 GO:0044041 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044278 GO:0044419 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051672 GO:0051704 GO:0051707 GO:0071704 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Glyco_hydro_85

Protein Analysis

717

Amino Acids

80.64

Weight (kDa)

6.08

Isoelectric Point (pI)

42.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_85	PF03644	116 - 393	3.3e-103	Glycosyl hydrolase family 85
Ig_ENGASE1_C	PF25529	603 - 715	1.4e-30	ENGASE1-like, C-terminal immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11040 AT3G11040 AT3G11040 AT3G61010 AT3G61010 AT3G61010 AT5G05460
fragaria_vesca	FvH4_7g25120 FvH4_7g25120 FvH4_7g25120 FvH4_7g25120
malus_domestica	MD01G1158000.v1.1 MD07G1226700.v1.1
prunus_persica	Prupe.2G256300_v2.0.a1
pyrus_communis	pycom01g17460 pycom01g17470 pycom07g20530
rosa_chinensis	RchiOBHm_Chr1g0370971
rosa_laevigata	RLG00000026994
rosa_multiflora	Rmu_sc0001018.1_g000014
rosa_roxburghii	Rroxscaffold_4G00286070
rosa_rugosa	Rorug01G0360400
rosa_samantha	Rh1AG370800 Rh1BG334400 Rh1CG347700 Rh1DG365600
rosa_wichuraiana	Rw1G032630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	884
Acc36I	ACCTGC	1 cut(s)	884
AccB7I	CCANNNNNTGG	1 cut(s)	334
AccI	GTMKAC	1 cut(s)	563
AccII	CGCG	1 cut(s)	36
AciI	CCGC	5 cut(s)	34, 79, 141, 578, 1664
AclWI	GGATC	6 cut(s)	222, 358, 371, 742, 1043, 1873
AcsI	RAATTY	6 cut(s)	672, 837, 1153, 1528, 1550, 1801
AfaI	GTAC	5 cut(s)	194, 1512, 1558, 1757, 1883
AfiI	CCNNNNNNNGG	5 cut(s)	334, 1605, 1606, 1827, 1985
AflII	CTTAAG	1 cut(s)	1892
AflIII	ACRYGT	1 cut(s)	1571
AhlI	ACTAGT	1 cut(s)	70
AjiI	CACGTC	1 cut(s)	1574
AjnI	CCWGG	8 cut(s)	207, 730, 1027, 1106, 1523, 1588, 1600, 2037
AluBI	AGCT	6 cut(s)	217, 607, 884, 1013, 2021, 2150
AluI	AGCT	6 cut(s)	217, 607, 884, 1013, 2021, 2150
Alw21I	GWGCWC	3 cut(s)	78, 219, 1741
Alw26I	GTCTC	1 cut(s)	1037
Alw44I	GTGCAC	1 cut(s)	74
AlwI	GGATC	6 cut(s)	222, 358, 371, 742, 1043, 1873
AlwNI	CAGNNNCTG	4 cut(s)	731, 887, 1595, 1868
AoxI	GGCC	6 cut(s)	173, 287, 308, 667, 1089, 1465
ApaI	GGGCCC	1 cut(s)	1093
ApaLI	GTGCAC	1 cut(s)	74
ApeKI	GCWGC	2 cut(s)	884, 1013
ApoI	RAATTY	6 cut(s)	672, 837, 1153, 1528, 1550, 1801
ArsI	GACNNNNNNTTYG	2 cut(s)	824, 856
Asp700I	GAANNNNTTC	2 cut(s)	718, 1538
AspS9I	GGNCC	7 cut(s)	174, 287, 309, 667, 1089, 1090, 1291
AsuC2I	CCSGG	1 cut(s)	172
AsuHPI	GGTGA	2 cut(s)	908, 2105
AsuII	TTCGAA	1 cut(s)	1532
AvaII	GGWCC	1 cut(s)	1291
BaeGI	GKGCMC	3 cut(s)	78, 947, 1093
BamHI	GGATCC	1 cut(s)	363
BanII	GRGCYC	2 cut(s)	219, 1093
BarI	GAAGNNNNNNTAC	2 cut(s)	1213, 1245
BbsI	GAAGAC	2 cut(s)	5, 1365
Bbv12I	GWGCWC	3 cut(s)	78, 219, 1741
BbvI	GCAGC	2 cut(s)	871, 1000
BceAI	ACGGC	2 cut(s)	274, 495
BciT130I	CCWGG	8 cut(s)	209, 732, 1029, 1108, 1525, 1590, 1602, 2039
BciVI	GTATCC	3 cut(s)	1166, 1531, 2134
BclI	TGATCA	2 cut(s)	639, 1159
BcnI	CCSGG	1 cut(s)	172
BcoDI	GTCTC	1 cut(s)	1037
BcuI	ACTAGT	1 cut(s)	70
BfaI	CTAG	7 cut(s)	44, 71, 1463, 1719, 1964, 2010, 2114
BfmI	CTRYAG	2 cut(s)	1672, 1860
BfrI	CTTAAG	1 cut(s)	1892
BfuAI	ACCTGC	1 cut(s)	884
BfuI	GTATCC	3 cut(s)	1166, 1531, 2134
BglI	GCCNNNNNGGC	1 cut(s)	307
BglII	AGATCT	1 cut(s)	1396
BisI	GCNGC	3 cut(s)	34, 885, 1014
BlpI	GCTNAGC	1 cut(s)	591
BlsI	GCNGC	3 cut(s)	35, 886, 1015
BmcAI	AGTACT	1 cut(s)	1757
Bme1390I	CCNGG	9 cut(s)	172, 209, 732, 1029, 1108, 1525, 1590, 1602, 2039
Bme18I	GGWCC	1 cut(s)	1291
BmgBI	CACGTC	1 cut(s)	1574
BmgT120I	GGNCC	7 cut(s)	174, 287, 309, 667, 1089, 1090, 1291
BmiI	GGNNCC	2 cut(s)	365, 1091
BmrFI	CCNGG	9 cut(s)	172, 209, 732, 1029, 1108, 1525, 1590, 1602, 2039
BmsI	GCATC	4 cut(s)	1198, 1322, 1631, 1635
BpiI	GAAGAC	2 cut(s)	5, 1365
BpmI	CTGGAG	1 cut(s)	1260
Bpu1102I	GCTNAGC	1 cut(s)	591
Bpu14I	TTCGAA	1 cut(s)	1532
BpuEI	CTTGAG	1 cut(s)	1528
BpuMI	CCSGG	1 cut(s)	172
BsaBI	GATNNNNATC	1 cut(s)	419
BsaJI	CCNNGG	7 cut(s)	207, 270, 367, 730, 1107, 1600, 1837
BsaWI	WCCGGW	1 cut(s)	2125
BsaXI	ACNNNNNCTCC	4 cut(s)	224, 251, 254, 281
Bsc4I	CCNNNNNNNGG	5 cut(s)	334, 1605, 1606, 1827, 1985
Bse1I	ACTGG	2 cut(s)	410, 788
Bse8I	GATNNNNATC	1 cut(s)	419
BseBI	CCWGG	8 cut(s)	209, 732, 1029, 1108, 1525, 1590, 1602, 2039
BseDI	CCNNGG	7 cut(s)	207, 270, 367, 730, 1107, 1600, 1837
BseGI	GGATG	6 cut(s)	535, 638, 1037, 1610, 1646, 1848
BseJI	GATNNNNATC	1 cut(s)	419
BseLI	CCNNNNNNNGG	5 cut(s)	334, 1605, 1606, 1827, 1985
BseMII	CTCAG	6 cut(s)	79, 582, 738, 1088, 1677, 1860
BseNI	ACTGG	2 cut(s)	410, 788
BseRI	GAGGAG	4 cut(s)	44, 1341, 1631, 1998
BseSI	GKGCMC	3 cut(s)	78, 947, 1093
BseXI	GCAGC	2 cut(s)	871, 1000
Bsh1236I	CGCG	1 cut(s)	36
BshFI	GGCC	6 cut(s)	175, 289, 310, 669, 1091, 1467
BsiHKAI	GWGCWC	3 cut(s)	78, 219, 1741
BsiSI	CCGG	2 cut(s)	172, 2126
BslFI	GGGAC	5 cut(s)	100, 388, 523, 713, 1424
BslI	CCNNNNNNNGG	5 cut(s)	334, 1605, 1606, 1827, 1985
BsmAI	GTCTC	1 cut(s)	1037
BsmFI	GGGAC	5 cut(s)	100, 388, 523, 713, 1424
BsmI	GAATGC	5 cut(s)	391, 718, 720, 973, 1075
BsnI	GGCC	6 cut(s)	175, 289, 310, 669, 1091, 1467
Bsp119I	TTCGAA	1 cut(s)	1532
Bsp120I	GGGCCC	1 cut(s)	1089
Bsp1286I	GDGCHC	5 cut(s)	78, 219, 947, 1093, 1741
Bsp1720I	GCTNAGC	1 cut(s)	591
BspACI	CCGC	5 cut(s)	34, 79, 141, 578, 1664
BspANI	GGCC	6 cut(s)	175, 289, 310, 669, 1091, 1467
BspCNI	CTCAG	6 cut(s)	78, 583, 737, 1087, 1678, 1861
BspFNI	CGCG	1 cut(s)	36
BspLI	GGNNCC	2 cut(s)	365, 1091
BspMI	ACCTGC	1 cut(s)	884
BspPI	GGATC	6 cut(s)	222, 358, 371, 742, 1043, 1873
BspQI	GCTCTTC	2 cut(s)	207, 459
BspT104I	TTCGAA	1 cut(s)	1532
BspTI	CTTAAG	1 cut(s)	1892
BsrI	ACTGG	2 cut(s)	410, 788
BssECI	CCNNGG	7 cut(s)	207, 270, 367, 730, 1107, 1600, 1837
BssT1I	CCWWGG	2 cut(s)	367, 1837
Bst2UI	CCWGG	8 cut(s)	209, 732, 1029, 1108, 1525, 1590, 1602, 2039
Bst4CI	ACNGT	5 cut(s)	135, 773, 1135, 1322, 1561
Bst6I	CTCTTC	4 cut(s)	107, 207, 459, 1425
BstAFI	CTTAAG	1 cut(s)	1892
BstAPI	GCANNNNNTGC	1 cut(s)	977
BstBI	TTCGAA	1 cut(s)	1532
BstC8I	GCNNGC	1 cut(s)	609
BstDEI	CTNAG	7 cut(s)	65, 591, 724, 1074, 1686, 1869, 1886
BstDSI	CCRYGG	1 cut(s)	270
BstF5I	GGATG	6 cut(s)	535, 638, 1037, 1610, 1646, 1848
BstFNI	CGCG	1 cut(s)	36
BstMAI	GTCTC	1 cut(s)	1037
BstMWI	GCNNNNNNNGC	5 cut(s)	307, 316, 890, 977, 1022
BstNI	CCWGG	8 cut(s)	209, 732, 1029, 1108, 1525, 1590, 1602, 2039
BstNSI	RCATGY	1 cut(s)	1664
BstSCI	CCNGG	9 cut(s)	170, 207, 730, 1027, 1106, 1523, 1588, 1600, 2037
BstSFI	CTRYAG	2 cut(s)	1672, 1860
BstSLI	GKGCMC	3 cut(s)	78, 947, 1093
BstUI	CGCG	1 cut(s)	36
BstV1I	GCAGC	2 cut(s)	871, 1000
BstV2I	GAAGAC	2 cut(s)	5, 1365
BstX2I	RGATCY	5 cut(s)	363, 734, 1035, 1396, 1865
BstXI	CCANNNNNNTGG	1 cut(s)	319
BstYI	RGATCY	5 cut(s)	363, 734, 1035, 1396, 1865
BsuI	GTATCC	3 cut(s)	1166, 1531, 2134
BsuRI	GGCC	6 cut(s)	175, 289, 310, 669, 1091, 1467
BtgI	CCRYGG	1 cut(s)	270
BtrI	CACGTC	1 cut(s)	1574
BtsCI	GGATG	6 cut(s)	535, 638, 1037, 1610, 1646, 1848
BtsI	GCAGTG	2 cut(s)	1374, 1770
BtsIMutI	CAGTG	7 cut(s)	403, 1260, 1327, 1374, 1443, 1566, 1770
BveI	ACCTGC	1 cut(s)	884
Cac8I	GCNNGC	1 cut(s)	609
CaiI	CAGNNNCTG	4 cut(s)	731, 887, 1595, 1868
Cfr13I	GGNCC	7 cut(s)	174, 287, 309, 667, 1089, 1090, 1291
Csp6I	GTAC	5 cut(s)	193, 1511, 1557, 1756, 1882
CviAII	CATG	9 cut(s)	329, 334, 491, 855, 1169, 1178, 1295, 1661, 1827
CviQI	GTAC	5 cut(s)	193, 1511, 1557, 1756, 1882
DdeI	CTNAG	7 cut(s)	65, 591, 724, 1074, 1686, 1869, 1886
DraI	TTTAAA	1 cut(s)	1345
Eam1104I	CTCTTC	4 cut(s)	107, 207, 459, 1425
EarI	CTCTTC	4 cut(s)	107, 207, 459, 1425
EciI	GGCGGA	1 cut(s)	130
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	2 cut(s)	367, 1837
Eco147I	AGGCCT	1 cut(s)	1467
Eco24I	GRGCYC	2 cut(s)	219, 1093
Eco32I	GATATC	1 cut(s)	421
Eco47I	GGWCC	1 cut(s)	1291
Eco53kI	GAGCTC	1 cut(s)	217
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	1090
EcoRI	GAATTC	1 cut(s)	1528
EcoRII	CCWGG	8 cut(s)	207, 730, 1027, 1106, 1523, 1588, 1600, 2037
EcoRV	GATATC	1 cut(s)	421
EcoT14I	CCWWGG	2 cut(s)	367, 1837
EcoT22I	ATGCAT	1 cut(s)	720
EcoT38I	GRGCYC	2 cut(s)	219, 1093
ErhI	CCWWGG	2 cut(s)	367, 1837
FaeI	CATG	9 cut(s)	332, 337, 494, 858, 1172, 1181, 1298, 1664, 1830
FaqI	GGGAC	5 cut(s)	100, 388, 523, 713, 1424
FatI	CATG	9 cut(s)	328, 333, 490, 854, 1168, 1177, 1294, 1660, 1826
FbaI	TGATCA	2 cut(s)	639, 1159
FblI	GTMKAC	1 cut(s)	563
Fnu4HI	GCNGC	3 cut(s)	34, 885, 1014
FokI	GGATG	6 cut(s)	542, 645, 1044, 1617, 1653, 1835
FriOI	GRGCYC	2 cut(s)	219, 1093
Fsp4HI	GCNGC	3 cut(s)	34, 885, 1014
FspBI	CTAG	7 cut(s)	44, 71, 1463, 1719, 1964, 2010, 2114
GluI	GCNGC	3 cut(s)	34, 885, 1014
GsuI	CTGGAG	1 cut(s)	1260
HaeIII	GGCC	6 cut(s)	175, 289, 310, 669, 1091, 1467
HapII	CCGG	2 cut(s)	172, 2126
Hin1II	CATG	9 cut(s)	332, 337, 494, 858, 1172, 1181, 1298, 1664, 1830
HincII	GTYRAC	1 cut(s)	1577
HindII	GTYRAC	1 cut(s)	1577
HindIII	AAGCTT	2 cut(s)	2019, 2148
HpaII	CCGG	2 cut(s)	172, 2126
HphI	GGTGA	2 cut(s)	908, 2105
Hpy166II	GTNNAC	8 cut(s)	76, 564, 776, 847, 959, 1260, 1577, 1796
Hpy188III	TCNNGA	5 cut(s)	225, 844, 1066, 1277, 1458
Hpy8I	GTNNAC	8 cut(s)	76, 564, 776, 847, 959, 1260, 1577, 1796
Hpy99I	CGWCG	1 cut(s)	295
HpyAV	CCTTC	8 cut(s)	253, 527, 933, 1184, 1630, 1827, 1964, 2058
HpyCH4III	ACNGT	5 cut(s)	135, 773, 1135, 1322, 1561
HpyCH4IV	ACGT	1 cut(s)	1573
HpyF10VI	GCNNNNNNNGC	5 cut(s)	307, 316, 890, 977, 1022
HpyF3I	CTNAG	7 cut(s)	65, 591, 724, 1074, 1686, 1869, 1886
HpySE526I	ACGT	1 cut(s)	1573
Hsp92II	CATG	9 cut(s)	332, 337, 494, 858, 1172, 1181, 1298, 1664, 1830
Ksp22I	TGATCA	2 cut(s)	639, 1159
LguI	GCTCTTC	2 cut(s)	207, 459
LmnI	GCTCC	1 cut(s)	1030
Lsp1109I	GCAGC	2 cut(s)	871, 1000
LweI	GCATC	4 cut(s)	1198, 1322, 1631, 1635
MaeI	CTAG	7 cut(s)	44, 71, 1463, 1719, 1964, 2010, 2114
MaeII	ACGT	1 cut(s)	1573
MaeIII	GTNAC	2 cut(s)	760, 1220
MflI	RGATCY	5 cut(s)	363, 734, 1035, 1396, 1865
MhlI	GDGCHC	5 cut(s)	78, 219, 947, 1093, 1741
MlyI	GAGTC	3 cut(s)	233, 581, 2114
MmeI	TCCRAC	2 cut(s)	449, 2118
Mph1103I	ATGCAT	1 cut(s)	720
MroXI	GAANNNNTTC	2 cut(s)	718, 1538
MseI	TTAA	7 cut(s)	258, 498, 704, 780, 1344, 1476, 1893
MslI	CAYNNNNRTG	2 cut(s)	489, 1631
MspA1I	CMGCKG	2 cut(s)	884, 1013
MspCI	CTTAAG	1 cut(s)	1892
MspI	CCGG	2 cut(s)	172, 2126
MspR9I	CCNGG	9 cut(s)	172, 209, 732, 1029, 1108, 1525, 1590, 1602, 2039
Mva1269I	GAATGC	5 cut(s)	391, 718, 720, 973, 1075
MvaI	CCWGG	8 cut(s)	209, 732, 1029, 1108, 1525, 1590, 1602, 2039
MvnI	CGCG	1 cut(s)	36
MwoI	GCNNNNNNNGC	5 cut(s)	307, 316, 890, 977, 1022
NciI	CCSGG	1 cut(s)	172
NlaIII	CATG	9 cut(s)	332, 337, 494, 858, 1172, 1181, 1298, 1664, 1830
NlaIV	GGNNCC	2 cut(s)	365, 1091
NsiI	ATGCAT	1 cut(s)	720
NspI	RCATGY	1 cut(s)	1664
NspV	TTCGAA	1 cut(s)	1532
PaqCI	CACCTGC	1 cut(s)	884
PceI	AGGCCT	1 cut(s)	1467
PciSI	GCTCTTC	2 cut(s)	207, 459
PcsI	WCGNNNNNNNCGW	2 cut(s)	16, 840
PctI	GAATGC	5 cut(s)	391, 718, 720, 973, 1075
PdmI	GAANNNNTTC	2 cut(s)	718, 1538
PfeI	GAWTC	7 cut(s)	4, 221, 379, 1078, 1823, 1874, 1925
PflMI	CCANNNNNTGG	1 cut(s)	334
PfoI	TCCNGGA	2 cut(s)	1027, 1523
PkrI	GCNGC	3 cut(s)	35, 886, 1015
PleI	GAGTC	3 cut(s)	233, 580, 2114
PpsI	GAGTC	3 cut(s)	233, 580, 2114
Psp124BI	GAGCTC	1 cut(s)	219
Psp6I	CCWGG	8 cut(s)	207, 730, 1027, 1106, 1523, 1588, 1600, 2037
PspGI	CCWGG	8 cut(s)	207, 730, 1027, 1106, 1523, 1588, 1600, 2037
PspN4I	GGNNCC	2 cut(s)	365, 1091
PspOMI	GGGCCC	1 cut(s)	1089
PspPI	GGNCC	7 cut(s)	174, 287, 309, 667, 1089, 1090, 1291
PstNI	CAGNNNCTG	4 cut(s)	731, 887, 1595, 1868
PsuI	RGATCY	5 cut(s)	363, 734, 1035, 1396, 1865
PvuII	CAGCTG	2 cut(s)	884, 1013
RsaI	GTAC	5 cut(s)	194, 1512, 1558, 1757, 1883
RsaNI	GTAC	5 cut(s)	193, 1511, 1557, 1756, 1882
RseI	CAYNNNNRTG	2 cut(s)	489, 1631
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	2 cut(s)	207, 459
SaqAI	TTAA	7 cut(s)	258, 498, 704, 780, 1344, 1476, 1893
SatI	GCNGC	3 cut(s)	34, 885, 1014
Sau96I	GGNCC	7 cut(s)	174, 287, 309, 667, 1089, 1090, 1291
ScaI	AGTACT	1 cut(s)	1757
SchI	GAGTC	3 cut(s)	233, 581, 2114
ScrFI	CCNGG	9 cut(s)	172, 209, 732, 1029, 1108, 1525, 1590, 1602, 2039
SduI	GDGCHC	5 cut(s)	78, 219, 947, 1093, 1741
SfaNI	GCATC	4 cut(s)	1198, 1322, 1631, 1635
SfcI	CTRYAG	2 cut(s)	1672, 1860
SfuI	TTCGAA	1 cut(s)	1532
SinI	GGWCC	1 cut(s)	1291
SmiMI	CAYNNNNRTG	2 cut(s)	489, 1631
SmlI	CTYRAG	2 cut(s)	1543, 1892
SmoI	CTYRAG	2 cut(s)	1543, 1892
SpeI	ACTAGT	1 cut(s)	70
SseBI	AGGCCT	1 cut(s)	1467
SsiI	CCGC	5 cut(s)	34, 79, 141, 578, 1664
SspMI	CTAG	7 cut(s)	44, 71, 1463, 1719, 1964, 2010, 2114
SstI	GAGCTC	1 cut(s)	219
StuI	AGGCCT	1 cut(s)	1467
StyD4I	CCNGG	9 cut(s)	170, 207, 730, 1027, 1106, 1523, 1588, 1600, 2037
StyI	CCWWGG	2 cut(s)	367, 1837
TaaI	ACNGT	5 cut(s)	135, 773, 1135, 1322, 1561
TaiI	ACGT	1 cut(s)	1576
TaqI	TCGA	7 cut(s)	162, 219, 237, 395, 627, 1459, 1532
TatI	WGTACW	2 cut(s)	1556, 1755
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	7 cut(s)	4, 221, 379, 1078, 1823, 1874, 1925
Tru1I	TTAA	7 cut(s)	258, 498, 704, 780, 1344, 1476, 1893
Tru9I	TTAA	7 cut(s)	258, 498, 704, 780, 1344, 1476, 1893
TscAI	CASTG	7 cut(s)	410, 1267, 1327, 1381, 1443, 1566, 1770
TseI	GCWGC	2 cut(s)	884, 1013
TspGWI	ACGGA	3 cut(s)	259, 849, 1766
TspRI	CASTG	7 cut(s)	410, 1267, 1327, 1381, 1443, 1566, 1770
Van91I	CCANNNNNTGG	1 cut(s)	334
Vha464I	CTTAAG	1 cut(s)	1892
VneI	GTGCAC	1 cut(s)	74
VpaK11BI	GGWCC	1 cut(s)	1291
XapI	RAATTY	6 cut(s)	672, 837, 1153, 1528, 1550, 1801
XceI	RCATGY	1 cut(s)	1664
XcmI	CCANNNNNNNNNTGG	2 cut(s)	335, 465
XmiI	GTMKAC	1 cut(s)	563
XmnI	GAANNNNTTC	2 cut(s)	718, 1538
XspI	CTAG	7 cut(s)	44, 71, 1463, 1719, 1964, 2010, 2114
ZrmI	AGTACT	1 cut(s)	1757
Zsp2I	ATGCAT	1 cut(s)	720

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.