Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0006100

Physical Location & Seq

Genomic Coordinates Forward (+)

7246030 .. 7252451

Gene Structure 6422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00286070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGCTTCTTCGTCTTCTTCGTGCCTACATCAGCCGCGAAACCCTAGCCTCTCTCCTCAAACCCCTCAGACTAGTCCACCGCAAAGTCCGAACGTTTTTCCTCTTCTTCAAAATGTCCCAACCCACCTCTCCACAGTCCTCCGGCCCAACCCCTCCGCCATTCGACCCGACCCGGCCCTCCATACCCATCTCGTACCCGATCAAAACCCTCGAAGAGCTCGAATCCCGATCCTACTTCGACTCCTTCCACTACCCCTTTAACAAATCCTCCGTGGCTCTCCCATCTGGGCCGTCGGGTCAGCCCAATCGGCCCAGATTGCTCGTCTGCCATGACATGGCTGGTGGCTATGGAGATGATAGGTGGATCCAAGGAGGGACGAATCCGAATGCGTATTCGATATGGCACTGGTATTTGATTGATATCTTCGTCTACTTTTCGCATAGTCTTGTGGCTCTTCCACCTCCTTGTTGGACTAACACGGCTCATAAGCATGGTGTTAAGGCTTTCAGTTGTGGAAATGTGGATAATCTTGTTGTGTGTTGTTTTCGATTTGCTTATGTCTTGCTTGACTTGTTTTGCTTTAGAGTGTATGGTCTGAATGATCGAACTGAATTTTTGGTTTTGCATATGGGATCCAAGGTGTTGGGGACTTTCATCACAGAATGGGATGAAGGGAAACTTATATGCAACAAATTACTGTCCACAAAAGAGTCTGCAGAGATGTATGCTGAGCGCTTGGTAGAGCTTGCTGTTGCTTTGGGCTTCGATGGATGGCTGATCAATATGGAAGTTGAATTGGAATTGGGCCAAATTCCTAATTTGAAAGCATTTGTGAGCCACTTAACCCAGAGAATGCATTCCTCAGTCCCTGGATCTTTAGTGATATGGTATGATAGTGTTACAACTGACGGTAAACTTAACTGGCAAAACCAACTAAATGAAAAGAATAAACCATTCTTTGATATATCTGACGGAATTTTCGTGAACTATACATGGAAGCAAAAAACTCCGAAGCAATCAGCTGCTGTTGCAGGTGATAGAAAGTTTGATGTATATATGGGTATTGATGTATTTGGAAGGGGCACTTTCGGTGGTGGACAATGGAATGCAAGTGTTGCACTTGATTTGCTGAAAAATGATGATGTGTCAGCTGCCATATTTGCTCCTGGATGGATCTATGAGACTAATCAACCACCGAACTTCCAGACTGCTCAGAATCATTGGTGGGCCCTTGTGGAAAAATCCTGGGGAATAACACAGAATTATCCTACTGTTCTACCATTCTATTCAAATTTTGATCAGGGTCATGGATACCATGTTTCTGTTGAAGGCGAGGAAGTATCAGATGCTTCTTGGTGTAACATTTCTTCCCAAAGTTTTCAGCCTTTGCTTCTGTTCACTGATAATTCAGCTCCAGATGGTATTCAGGTCCATGTTGAGGAAGCATCTTACAGTGGAGGAGGAAACATCACATTTAAAGGAAACCTTGAAGACAATGCTGATTTCACTGCAAGGCTCTTTCAAGGAGATCTTCTTTTGGGGGACTTGCCTCTTCACTTCATATATTCAGTGAAATCGGAGAATAATTCTCGAATAGGCCTTTTTCTTAATTTTGTTTCTACTCTAAACAAAAAAAAGTCTGTACTTCTTGTATCCTGGAATTCGAACCAATTCTCAAGCAAATTTAGTACAGTGATTAGGACACGTCAACTTGAAAGACCAGGAACTGCCCCTGGATGGGTTATAGAGGAGAGTAGCATCAGAATGAAGGGATGCAGACTAACTGAAATACATGCGGTGTGCTACAGGTCAAAGCCTGAGTTTGATGAAAAGATACCGAAATCCAAAACTAGCCAAGATAATTCTTGTGCTCATAATTCAACGGAGTACTATGCAGTGCTTGGTCATATTTCAATGAAATCTTGTGGACAAAATTCAGATTTTCCACCTTCCAATTCGTGGCTTGTCCAAGGTCAGTTCATCCAATGGACTACAGGATCTGAGGATTCCAAGTACCTTAGTCTTAAGATCGCTTGGAAATTGAAAGATGGGAATGATTCTGCATACTCAACCTATAACATTTATGTTGAGAAACTAGCAGAAGGAAAACCAAGAGGACACTCCTATCTTGGAGTGGCTAGAGTGGAATGTTTTTATGTTTATGACCTGGCAGTTCCTTCTGACACTTCTACCATCAAGTTCATTATTCAAGTGTGTGGTGGTGATGGGAGTAGCCAGAAACTAGATGACTCTCCGGTTTTTCTGTTGGATACTGAAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000270 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0004563 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005975 GO:0006022 GO:0006026 GO:0006027 GO:0006464 GO:0006491 GO:0006517 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009100 GO:0009253 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0015929 GO:0016052 GO:0016231 GO:0016787 GO:0016798 GO:0019538 GO:0030203 GO:0033925 GO:0035821 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044033 GO:0044035 GO:0044040 GO:0044041 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044278 GO:0044419 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051672 GO:0051704 GO:0051707 GO:0071704 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Glyco_hydro_85

Protein Analysis

760

Amino Acids

85.5

Weight (kDa)

6.19

Isoelectric Point (pI)

41.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_85	PF03644	116 - 169	9.8e-18	Glycosyl hydrolase family 85
Glyco_hydro_85	PF03644	211 - 439	2.1e-78	Glycosyl hydrolase family 85
Ig_ENGASE1_C	PF25529	647 - 758	4.2e-30	ENGASE1-like, C-terminal immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11040 AT3G11040 AT3G11040 AT3G61010 AT3G61010 AT3G61010 AT5G05460
fragaria_vesca	FvH4_7g25120 FvH4_7g25120 FvH4_7g25120 FvH4_7g25120
malus_domestica	MD01G1158000.v1.1 MD07G1226700.v1.1
prunus_persica	Prupe.2G256300_v2.0.a1
pyrus_communis	pycom01g17460 pycom01g17470 pycom07g20530
rosa_chinensis	RchiOBHm_Chr1g0370971
rosa_laevigata	RLG00000026994
rosa_multiflora	Rmu_sc0001018.1_g000014
rosa_roxburghii	Rroxscaffold_4G00286070
rosa_rugosa	Rorug01G0360400
rosa_samantha	Rh1AG370800 Rh1BG334400 Rh1CG347700 Rh1DG365600
rosa_wichuraiana	Rw1G032630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1022
Acc36I	ACCTGC	1 cut(s)	1022
AccB7I	CCANNNNNTGG	2 cut(s)	334, 1959
AccI	GTMKAC	1 cut(s)	429
AccII	CGCG	1 cut(s)	36
AciI	CCGC	4 cut(s)	34, 79, 155, 1796
AclI	AACGTT	1 cut(s)	92
AclWI	GGATC	8 cut(s)	222, 358, 371, 627, 640, 880, 1181, 2005
AcsI	RAATTY	7 cut(s)	611, 810, 975, 1291, 1660, 1682, 1933
AfaI	GTAC	5 cut(s)	194, 1644, 1690, 1889, 2015
AfeI	AGCGCT	1 cut(s)	734
AfiI	CCNNNNNNNGG	5 cut(s)	334, 1438, 1737, 1738, 1959
AflII	CTTAAG	1 cut(s)	2024
AflIII	ACRYGT	1 cut(s)	1703
AhlI	ACTAGT	1 cut(s)	70
AjiI	CACGTC	1 cut(s)	1706
AjnI	CCWGG	7 cut(s)	868, 1165, 1244, 1655, 1720, 1732, 2166
AluBI	AGCT	6 cut(s)	217, 745, 1022, 1151, 1412, 2279
AluI	AGCT	6 cut(s)	217, 745, 1022, 1151, 1412, 2279
Alw21I	GWGCWC	2 cut(s)	219, 1873
Alw26I	GTCTC	1 cut(s)	1175
AlwI	GGATC	8 cut(s)	222, 358, 371, 627, 640, 880, 1181, 2005
AlwNI	CAGNNNCTG	4 cut(s)	869, 1025, 1727, 2000
Aor51HI	AGCGCT	1 cut(s)	734
AoxI	GGCC	7 cut(s)	142, 173, 287, 308, 805, 1227, 1597
ApaI	GGGCCC	1 cut(s)	1231
ApeKI	GCWGC	2 cut(s)	1022, 1151
ApoI	RAATTY	7 cut(s)	611, 810, 975, 1291, 1660, 1682, 1933
ArsI	GACNNNNNNTTYG	2 cut(s)	962, 994
Asp700I	GAANNNNTTC	2 cut(s)	856, 1670
AspLEI	GCGC	1 cut(s)	735
AspS9I	GGNCC	8 cut(s)	143, 174, 287, 309, 805, 1227, 1228, 1429
AsuC2I	CCSGG	1 cut(s)	172
AsuHPI	GGTGA	2 cut(s)	1046, 2234
AsuII	TTCGAA	1 cut(s)	1664
AvaII	GGWCC	1 cut(s)	1429
BaeGI	GKGCMC	2 cut(s)	1085, 1231
BamHI	GGATCC	2 cut(s)	363, 632
BanII	GRGCYC	2 cut(s)	219, 1231
BarI	GAAGNNNNNNTAC	2 cut(s)	1351, 1383
BbsI	GAAGAC	2 cut(s)	5, 1497
Bbv12I	GWGCWC	2 cut(s)	219, 1873
BbvI	GCAGC	2 cut(s)	1009, 1138
BceAI	ACGGC	2 cut(s)	274, 495
BciT130I	CCWGG	7 cut(s)	870, 1167, 1246, 1657, 1722, 1734, 2168
BciVI	GTATCC	3 cut(s)	1304, 1663, 2263
BclI	TGATCA	2 cut(s)	777, 1297
BcnI	CCSGG	1 cut(s)	172
BcoDI	GTCTC	1 cut(s)	1175
BcuI	ACTAGT	1 cut(s)	70
BfaI	CTAG	6 cut(s)	44, 71, 1851, 2096, 2139, 2243
BfmI	CTRYAG	3 cut(s)	714, 1804, 1992
BfoI	RGCGCY	1 cut(s)	736
BfrI	CTTAAG	1 cut(s)	2024
BfuAI	ACCTGC	1 cut(s)	1022
BfuI	GTATCC	3 cut(s)	1304, 1663, 2263
BglI	GCCNNNNNGGC	1 cut(s)	307
BglII	AGATCT	1 cut(s)	1528
BisI	GCNGC	3 cut(s)	34, 1023, 1152
BlpI	GCTNAGC	1 cut(s)	729
BlsI	GCNGC	3 cut(s)	35, 1024, 1153
BmcAI	AGTACT	1 cut(s)	1889
Bme1390I	CCNGG	8 cut(s)	172, 870, 1167, 1246, 1657, 1722, 1734, 2168
Bme18I	GGWCC	1 cut(s)	1429
BmgBI	CACGTC	1 cut(s)	1706
BmgT120I	GGNCC	8 cut(s)	143, 174, 287, 309, 805, 1227, 1228, 1429
BmiI	GGNNCC	3 cut(s)	365, 634, 1229
BmrFI	CCNGG	8 cut(s)	172, 870, 1167, 1246, 1657, 1722, 1734, 2168
BmsI	GCATC	4 cut(s)	1336, 1454, 1763, 1767
BpiI	GAAGAC	2 cut(s)	5, 1497
BpmI	CTGGAG	1 cut(s)	1398
Bpu1102I	GCTNAGC	1 cut(s)	729
Bpu14I	TTCGAA	1 cut(s)	1664
BpuEI	CTTGAG	1 cut(s)	1660
BpuMI	CCSGG	1 cut(s)	172
BsaBI	GATNNNNATC	1 cut(s)	419
BsaJI	CCNNGG	7 cut(s)	270, 367, 636, 868, 1245, 1732, 1969
BsaWI	WCCGGW	1 cut(s)	2254
BsaXI	ACNNNNNCTCC	4 cut(s)	224, 251, 254, 281
Bsc4I	CCNNNNNNNGG	5 cut(s)	334, 1438, 1737, 1738, 1959
Bse1I	ACTGG	2 cut(s)	410, 926
Bse8I	GATNNNNATC	1 cut(s)	419
BseBI	CCWGG	7 cut(s)	870, 1167, 1246, 1657, 1722, 1734, 2168
BseDI	CCNNGG	7 cut(s)	270, 367, 636, 868, 1245, 1732, 1969
BseGI	GGATG	6 cut(s)	673, 776, 1175, 1742, 1778, 1980
BseJI	GATNNNNATC	1 cut(s)	419
BseLI	CCNNNNNNNGG	5 cut(s)	334, 1438, 1737, 1738, 1959
BseMII	CTCAG	6 cut(s)	79, 720, 876, 1226, 1809, 1992
BseNI	ACTGG	2 cut(s)	410, 926
BseRI	GAGGAG	3 cut(s)	44, 1473, 1763
BseSI	GKGCMC	2 cut(s)	1085, 1231
BseXI	GCAGC	2 cut(s)	1009, 1138
Bsh1236I	CGCG	1 cut(s)	36
BshFI	GGCC	7 cut(s)	144, 175, 289, 310, 807, 1229, 1599
BsiHKAI	GWGCWC	2 cut(s)	219, 1873
BsiSI	CCGG	3 cut(s)	141, 172, 2255
BslFI	GGGAC	5 cut(s)	100, 388, 661, 851, 1556
BslI	CCNNNNNNNGG	5 cut(s)	334, 1438, 1737, 1738, 1959
BsmAI	GTCTC	1 cut(s)	1175
BsmFI	GGGAC	5 cut(s)	100, 388, 661, 851, 1556
BsmI	GAATGC	4 cut(s)	391, 856, 858, 1111
BsnI	GGCC	7 cut(s)	144, 175, 289, 310, 807, 1229, 1599
Bsp119I	TTCGAA	1 cut(s)	1664
Bsp120I	GGGCCC	1 cut(s)	1227
Bsp1286I	GDGCHC	4 cut(s)	219, 1085, 1231, 1873
Bsp1720I	GCTNAGC	1 cut(s)	729
BspACI	CCGC	4 cut(s)	34, 79, 155, 1796
BspANI	GGCC	7 cut(s)	144, 175, 289, 310, 807, 1229, 1599
BspCNI	CTCAG	6 cut(s)	78, 721, 875, 1225, 1810, 1993
BspFNI	CGCG	1 cut(s)	36
BspLI	GGNNCC	3 cut(s)	365, 634, 1229
BspMAI	CTGCAG	1 cut(s)	718
BspMI	ACCTGC	1 cut(s)	1022
BspPI	GGATC	8 cut(s)	222, 358, 371, 627, 640, 880, 1181, 2005
BspQI	GCTCTTC	2 cut(s)	207, 459
BspT104I	TTCGAA	1 cut(s)	1664
BspTI	CTTAAG	1 cut(s)	2024
BsrI	ACTGG	2 cut(s)	410, 926
BssECI	CCNNGG	7 cut(s)	270, 367, 636, 868, 1245, 1732, 1969
BssT1I	CCWWGG	3 cut(s)	367, 636, 1969
Bst2UI	CCWGG	7 cut(s)	870, 1167, 1246, 1657, 1722, 1734, 2168
Bst4CI	ACNGT	6 cut(s)	135, 699, 911, 1273, 1454, 1693
Bst6I	CTCTTC	4 cut(s)	107, 207, 459, 1557
BstAFI	CTTAAG	1 cut(s)	2024
BstAPI	GCANNNNNTGC	1 cut(s)	1115
BstBI	TTCGAA	1 cut(s)	1664
BstC8I	GCNNGC	1 cut(s)	747
BstDEI	CTNAG	7 cut(s)	65, 729, 862, 1212, 1818, 2001, 2018
BstDSI	CCRYGG	1 cut(s)	270
BstF5I	GGATG	6 cut(s)	673, 776, 1175, 1742, 1778, 1980
BstFNI	CGCG	1 cut(s)	36
BstH2I	RGCGCY	1 cut(s)	736
BstHHI	GCGC	1 cut(s)	735
BstMAI	GTCTC	1 cut(s)	1175
BstMWI	GCNNNNNNNGC	5 cut(s)	307, 316, 1028, 1115, 1160
BstNI	CCWGG	7 cut(s)	870, 1167, 1246, 1657, 1722, 1734, 2168
BstNSI	RCATGY	1 cut(s)	1796
BstSCI	CCNGG	8 cut(s)	170, 868, 1165, 1244, 1655, 1720, 1732, 2166
BstSFI	CTRYAG	3 cut(s)	714, 1804, 1992
BstSLI	GKGCMC	2 cut(s)	1085, 1231
BstUI	CGCG	1 cut(s)	36
BstV1I	GCAGC	2 cut(s)	1009, 1138
BstV2I	GAAGAC	2 cut(s)	5, 1497
BstX2I	RGATCY	6 cut(s)	363, 632, 872, 1173, 1528, 1997
BstXI	CCANNNNNNTGG	1 cut(s)	643
BstYI	RGATCY	6 cut(s)	363, 632, 872, 1173, 1528, 1997
BsuI	GTATCC	3 cut(s)	1304, 1663, 2263
BsuRI	GGCC	7 cut(s)	144, 175, 289, 310, 807, 1229, 1599
BtgI	CCRYGG	1 cut(s)	270
BtrI	CACGTC	1 cut(s)	1706
BtsCI	GGATG	6 cut(s)	673, 776, 1175, 1742, 1778, 1980
BtsI	GCAGTG	2 cut(s)	1506, 1902
BtsIMutI	CAGTG	7 cut(s)	403, 1398, 1459, 1506, 1575, 1698, 1902
BveI	ACCTGC	1 cut(s)	1022
Cac8I	GCNNGC	1 cut(s)	747
CaiI	CAGNNNCTG	4 cut(s)	869, 1025, 1727, 2000
CfoI	GCGC	1 cut(s)	735
Cfr13I	GGNCC	8 cut(s)	143, 174, 287, 309, 805, 1227, 1228, 1429
Csp6I	GTAC	5 cut(s)	193, 1643, 1689, 1888, 2014
CviAII	CATG	8 cut(s)	329, 334, 491, 993, 1307, 1316, 1433, 1793
CviQI	GTAC	5 cut(s)	193, 1643, 1689, 1888, 2014
DdeI	CTNAG	7 cut(s)	65, 729, 862, 1212, 1818, 2001, 2018
DraI	TTTAAA	1 cut(s)	1477
Eam1104I	CTCTTC	4 cut(s)	107, 207, 459, 1557
EarI	CTCTTC	4 cut(s)	107, 207, 459, 1557
EciI	GGCGGA	1 cut(s)	144
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	3 cut(s)	367, 636, 1969
Eco147I	AGGCCT	1 cut(s)	1599
Eco24I	GRGCYC	2 cut(s)	219, 1231
Eco32I	GATATC	1 cut(s)	421
Eco47I	GGWCC	1 cut(s)	1429
Eco47III	AGCGCT	1 cut(s)	734
Eco53kI	GAGCTC	1 cut(s)	217
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	1228
EcoRI	GAATTC	1 cut(s)	1660
EcoRII	CCWGG	7 cut(s)	868, 1165, 1244, 1655, 1720, 1732, 2166
EcoRV	GATATC	1 cut(s)	421
EcoT14I	CCWWGG	3 cut(s)	367, 636, 1969
EcoT22I	ATGCAT	1 cut(s)	858
EcoT38I	GRGCYC	2 cut(s)	219, 1231
ErhI	CCWWGG	3 cut(s)	367, 636, 1969
FaeI	CATG	8 cut(s)	332, 337, 494, 996, 1310, 1319, 1436, 1796
FalI	AAGNNNNNCTT	8 cut(s)	663, 695, 1069, 1101, 1470, 1502, 1515, 1547
FaqI	GGGAC	5 cut(s)	100, 388, 661, 851, 1556
FatI	CATG	8 cut(s)	328, 333, 490, 992, 1306, 1315, 1432, 1792
FauNDI	CATATG	1 cut(s)	627
FbaI	TGATCA	2 cut(s)	777, 1297
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	3 cut(s)	34, 1023, 1152
FokI	GGATG	6 cut(s)	680, 783, 1182, 1749, 1785, 1967
FriOI	GRGCYC	2 cut(s)	219, 1231
Fsp4HI	GCNGC	3 cut(s)	34, 1023, 1152
FspBI	CTAG	6 cut(s)	44, 71, 1851, 2096, 2139, 2243
GlaI	GCGC	1 cut(s)	734
GluI	GCNGC	3 cut(s)	34, 1023, 1152
GsuI	CTGGAG	1 cut(s)	1398
HaeII	RGCGCY	1 cut(s)	736
HaeIII	GGCC	7 cut(s)	144, 175, 289, 310, 807, 1229, 1599
HapII	CCGG	3 cut(s)	141, 172, 2255
HhaI	GCGC	1 cut(s)	735
Hin1II	CATG	8 cut(s)	332, 337, 494, 996, 1310, 1319, 1436, 1796
Hin6I	GCGC	1 cut(s)	733
HinP1I	GCGC	1 cut(s)	733
HincII	GTYRAC	1 cut(s)	1709
HindII	GTYRAC	1 cut(s)	1709
HindIII	AAGCTT	1 cut(s)	2277
HinfI	GANTC	8 cut(s)	221, 239, 379, 710, 1216, 2006, 2057, 2249
HpaII	CCGG	3 cut(s)	141, 172, 2255
HphI	GGTGA	2 cut(s)	1046, 2234
Hpy166II	GTNNAC	9 cut(s)	76, 430, 702, 914, 985, 1097, 1398, 1709, 1928
Hpy188III	TCNNGA	5 cut(s)	225, 982, 1204, 1415, 1590
Hpy8I	GTNNAC	9 cut(s)	76, 430, 702, 914, 985, 1097, 1398, 1709, 1928
Hpy99I	CGWCG	1 cut(s)	295
HpyAV	CCTTC	8 cut(s)	253, 665, 1071, 1322, 1762, 1959, 2096, 2187
HpyCH4III	ACNGT	6 cut(s)	135, 699, 911, 1273, 1454, 1693
HpyCH4IV	ACGT	2 cut(s)	92, 1705
HpyF10VI	GCNNNNNNNGC	5 cut(s)	307, 316, 1028, 1115, 1160
HpyF3I	CTNAG	7 cut(s)	65, 729, 862, 1212, 1818, 2001, 2018
HpySE526I	ACGT	2 cut(s)	92, 1705
Hsp92II	CATG	8 cut(s)	332, 337, 494, 996, 1310, 1319, 1436, 1796
HspAI	GCGC	1 cut(s)	733
Ksp22I	TGATCA	2 cut(s)	777, 1297
LguI	GCTCTTC	2 cut(s)	207, 459
LmnI	GCTCC	2 cut(s)	1168, 1417
Lsp1109I	GCAGC	2 cut(s)	1009, 1138
LweI	GCATC	4 cut(s)	1336, 1454, 1763, 1767
MaeI	CTAG	6 cut(s)	44, 71, 1851, 2096, 2139, 2243
MaeII	ACGT	2 cut(s)	92, 1705
MaeIII	GTNAC	2 cut(s)	898, 1358
MflI	RGATCY	6 cut(s)	363, 632, 872, 1173, 1528, 1997
MhlI	GDGCHC	4 cut(s)	219, 1085, 1231, 1873
MlyI	GAGTC	3 cut(s)	233, 719, 2243
MmeI	TCCRAC	2 cut(s)	449, 2247
Mph1103I	ATGCAT	1 cut(s)	858
MroXI	GAANNNNTTC	2 cut(s)	856, 1670
MseI	TTAA	7 cut(s)	258, 498, 842, 918, 1476, 1608, 2025
MslI	CAYNNNNRTG	2 cut(s)	489, 1763
MspA1I	CMGCKG	2 cut(s)	1022, 1151
MspCI	CTTAAG	1 cut(s)	2024
MspI	CCGG	3 cut(s)	141, 172, 2255
MspR9I	CCNGG	8 cut(s)	172, 870, 1167, 1246, 1657, 1722, 1734, 2168
Mva1269I	GAATGC	4 cut(s)	391, 856, 858, 1111
MvaI	CCWGG	7 cut(s)	870, 1167, 1246, 1657, 1722, 1734, 2168
MvnI	CGCG	1 cut(s)	36
MwoI	GCNNNNNNNGC	5 cut(s)	307, 316, 1028, 1115, 1160
NciI	CCSGG	1 cut(s)	172
NdeI	CATATG	1 cut(s)	627
NlaIII	CATG	8 cut(s)	332, 337, 494, 996, 1310, 1319, 1436, 1796
NlaIV	GGNNCC	3 cut(s)	365, 634, 1229
NsiI	ATGCAT	1 cut(s)	858
NspI	RCATGY	1 cut(s)	1796
NspV	TTCGAA	1 cut(s)	1664
PaqCI	CACCTGC	1 cut(s)	1022
PceI	AGGCCT	1 cut(s)	1599
PciSI	GCTCTTC	2 cut(s)	207, 459
PcsI	WCGNNNNNNNCGW	3 cut(s)	16, 216, 978
PctI	GAATGC	4 cut(s)	391, 856, 858, 1111
PdmI	GAANNNNTTC	2 cut(s)	856, 1670
PfeI	GAWTC	5 cut(s)	221, 379, 1216, 2006, 2057
PflMI	CCANNNNNTGG	2 cut(s)	334, 1959
PfoI	TCCNGGA	2 cut(s)	1165, 1655
PkrI	GCNGC	3 cut(s)	35, 1024, 1153
PleI	GAGTC	3 cut(s)	233, 718, 2243
PpsI	GAGTC	3 cut(s)	233, 718, 2243
Psp124BI	GAGCTC	1 cut(s)	219
Psp1406I	AACGTT	1 cut(s)	92
Psp6I	CCWGG	7 cut(s)	868, 1165, 1244, 1655, 1720, 1732, 2166
PspGI	CCWGG	7 cut(s)	868, 1165, 1244, 1655, 1720, 1732, 2166
PspN4I	GGNNCC	3 cut(s)	365, 634, 1229
PspOMI	GGGCCC	1 cut(s)	1227
PspPI	GGNCC	8 cut(s)	143, 174, 287, 309, 805, 1227, 1228, 1429
PstI	CTGCAG	1 cut(s)	718
PstNI	CAGNNNCTG	4 cut(s)	869, 1025, 1727, 2000
PsuI	RGATCY	6 cut(s)	363, 632, 872, 1173, 1528, 1997
PvuII	CAGCTG	2 cut(s)	1022, 1151
RsaI	GTAC	5 cut(s)	194, 1644, 1690, 1889, 2015
RsaNI	GTAC	5 cut(s)	193, 1643, 1689, 1888, 2014
RseI	CAYNNNNRTG	2 cut(s)	489, 1763
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	2 cut(s)	207, 459
SaqAI	TTAA	7 cut(s)	258, 498, 842, 918, 1476, 1608, 2025
SatI	GCNGC	3 cut(s)	34, 1023, 1152
Sau96I	GGNCC	8 cut(s)	143, 174, 287, 309, 805, 1227, 1228, 1429
ScaI	AGTACT	1 cut(s)	1889
SchI	GAGTC	3 cut(s)	233, 719, 2243
ScrFI	CCNGG	8 cut(s)	172, 870, 1167, 1246, 1657, 1722, 1734, 2168
SduI	GDGCHC	4 cut(s)	219, 1085, 1231, 1873
SfaNI	GCATC	4 cut(s)	1336, 1454, 1763, 1767
SfcI	CTRYAG	3 cut(s)	714, 1804, 1992
SfuI	TTCGAA	1 cut(s)	1664
SinI	GGWCC	1 cut(s)	1429
SmiMI	CAYNNNNRTG	2 cut(s)	489, 1763
SmlI	CTYRAG	2 cut(s)	1675, 2024
SmoI	CTYRAG	2 cut(s)	1675, 2024
SpeI	ACTAGT	1 cut(s)	70
SseBI	AGGCCT	1 cut(s)	1599
SsiI	CCGC	4 cut(s)	34, 79, 155, 1796
SspMI	CTAG	6 cut(s)	44, 71, 1851, 2096, 2139, 2243
SstI	GAGCTC	1 cut(s)	219
StuI	AGGCCT	1 cut(s)	1599
StyD4I	CCNGG	8 cut(s)	170, 868, 1165, 1244, 1655, 1720, 1732, 2166
StyI	CCWWGG	3 cut(s)	367, 636, 1969
TaaI	ACNGT	6 cut(s)	135, 699, 911, 1273, 1454, 1693
TaiI	ACGT	2 cut(s)	95, 1708
TatI	WGTACW	3 cut(s)	1642, 1688, 1887
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	5 cut(s)	221, 379, 1216, 2006, 2057
Tru1I	TTAA	7 cut(s)	258, 498, 842, 918, 1476, 1608, 2025
Tru9I	TTAA	7 cut(s)	258, 498, 842, 918, 1476, 1608, 2025
TscAI	CASTG	7 cut(s)	410, 1405, 1459, 1513, 1575, 1698, 1902
TseI	GCWGC	2 cut(s)	1022, 1151
TspDTI	ATGAA	9 cut(s)	643, 684, 954, 1549, 1781, 1842, 1931, 1969, 2191
TspGWI	ACGGA	3 cut(s)	259, 987, 1898
TspRI	CASTG	7 cut(s)	410, 1405, 1459, 1513, 1575, 1698, 1902
Van91I	CCANNNNNTGG	2 cut(s)	334, 1959
Vha464I	CTTAAG	1 cut(s)	2024
VpaK11BI	GGWCC	1 cut(s)	1429
XapI	RAATTY	7 cut(s)	611, 810, 975, 1291, 1660, 1682, 1933
XceI	RCATGY	1 cut(s)	1796
XcmI	CCANNNNNNNNNTGG	2 cut(s)	335, 465
XmiI	GTMKAC	1 cut(s)	429
XmnI	GAANNNNTTC	2 cut(s)	856, 1670
XspI	CTAG	6 cut(s)	44, 71, 1851, 2096, 2139, 2243
ZrmI	AGTACT	1 cut(s)	1889
Zsp2I	ATGCAT	1 cut(s)	858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.