mitochondrial intermediate peptidase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51540 |
| fragaria_vesca | FvH4_7g27930 FvH4_7g27930 |
| malus_domestica | MD07G1256400.v1.1 |
| prunus_persica | Prupe.2G280500_v2.0.a1 |
| pyrus_communis | pycom07g22930 |
| rosa_chinensis | RchiOBHm_Chr1g0374891 |
| rosa_laevigata | RLG00000026709 |
| rosa_multiflora | Rmu_sc0003145.1_g000006 Rmu_sc0004947.1_g000033 |
| rosa_roxburghii | Rroxscaffold_4G00283200 |
| rosa_rugosa | Rorug01G0385600 |
| rosa_samantha | Rh1AG397200 Rh1BG361000 Rh1CG374700 Rh1DG392000 |
| rosa_wichuraiana | Rw1G035220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 465 |
| Acc36I | ACCTGC | 1 cut(s) | 1886 |
| Acc65I | GGTACC | 2 cut(s) | 710, 1553 |
| AccB1I | GGYRCC | 6 cut(s) | 710, 778, 1205, 1248, 1553, 1697 |
| AccI | GTMKAC | 2 cut(s) | 168, 301 |
| AccII | CGCG | 2 cut(s) | 290, 1844 |
| AccIII | TCCGGA | 2 cut(s) | 188, 795 |
| AclWI | GGATC | 4 cut(s) | 1958, 1971, 2062, 2075 |
| AcoI | YGGCCR | 1 cut(s) | 1372 |
| AcsI | RAATTY | 7 cut(s) | 323, 549, 637, 820, 914, 2003, 2077 |
| AcuI | CTGAAG | 1 cut(s) | 1305 |
| AdeI | CACNNNGTG | 1 cut(s) | 1238 |
| AfaI | GTAC | 6 cut(s) | 95, 601, 712, 1322, 1555, 1604 |
| AfeI | AGCGCT | 1 cut(s) | 1000 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 802, 1289 |
| AflII | CTTAAG | 1 cut(s) | 653 |
| AgeI | ACCGGT | 1 cut(s) | 113 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 164 |
| AhlI | ACTAGT | 1 cut(s) | 1829 |
| AjnI | CCWGG | 4 cut(s) | 1234, 1342, 1556, 1956 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 810, 842, 2079, 2111 |
| Alw21I | GWGCWC | 1 cut(s) | 1354 |
| Alw26I | GTCTC | 2 cut(s) | 122, 1275 |
| AlwI | GGATC | 4 cut(s) | 1958, 1971, 2062, 2075 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1951 |
| Ama87I | CYCGRG | 2 cut(s) | 595, 704 |
| Aor13HI | TCCGGA | 2 cut(s) | 188, 795 |
| Aor51HI | AGCGCT | 1 cut(s) | 1000 |
| AoxI | GGCC | 4 cut(s) | 70, 701, 1372, 1863 |
| ApaI | GGGCCC | 1 cut(s) | 74 |
| ApeKI | GCWGC | 1 cut(s) | 1715 |
| ApoI | RAATTY | 7 cut(s) | 323, 549, 637, 820, 914, 2003, 2077 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 308, 340 |
| AsiGI | ACCGGT | 1 cut(s) | 113 |
| Asp718I | GGTACC | 2 cut(s) | 710, 1553 |
| AspLEI | GCGC | 2 cut(s) | 466, 1001 |
| AspS9I | GGNCC | 6 cut(s) | 70, 71, 186, 702, 793, 1864 |
| AsuC2I | CCSGG | 6 cut(s) | 48, 69, 596, 597, 705, 706 |
| AsuHPI | GGTGA | 6 cut(s) | 433, 936, 1250, 1304, 1670, 1868 |
| AvaI | CYCGRG | 2 cut(s) | 595, 704 |
| AvaII | GGWCC | 2 cut(s) | 186, 793 |
| AxyI | CCTNAGG | 1 cut(s) | 2072 |
| BaeGI | GKGCMC | 2 cut(s) | 74, 781 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1545, 1578 |
| BamHI | GGATCC | 2 cut(s) | 1963, 2067 |
| BanI | GGYRCC | 6 cut(s) | 710, 778, 1205, 1248, 1553, 1697 |
| BanII | GRGCYC | 1 cut(s) | 74 |
| BauI | CACGAG | 1 cut(s) | 694 |
| BbsI | GAAGAC | 2 cut(s) | 1101, 1637 |
| Bbv12I | GWGCWC | 1 cut(s) | 1354 |
| BbvCI | CCTCAGC | 1 cut(s) | 226 |
| BbvI | GCAGC | 1 cut(s) | 1702 |
| BccI | CCATC | 4 cut(s) | 654, 668, 979, 2057 |
| BciT130I | CCWGG | 4 cut(s) | 1236, 1344, 1558, 1958 |
| BciVI | GTATCC | 1 cut(s) | 1350 |
| BclI | TGATCA | 1 cut(s) | 853 |
| BcnI | CCSGG | 6 cut(s) | 48, 69, 596, 597, 705, 706 |
| BcoDI | GTCTC | 2 cut(s) | 122, 1275 |
| BcuI | ACTAGT | 1 cut(s) | 1829 |
| BfaI | CTAG | 3 cut(s) | 971, 1229, 1830 |
| BfmI | CTRYAG | 1 cut(s) | 678 |
| BfoI | RGCGCY | 1 cut(s) | 1002 |
| BfrI | CTTAAG | 1 cut(s) | 653 |
| BfuAI | ACCTGC | 1 cut(s) | 1886 |
| BfuI | GTATCC | 1 cut(s) | 1350 |
| BglII | AGATCT | 2 cut(s) | 902, 1810 |
| BisI | GCNGC | 4 cut(s) | 1375, 1716, 1845, 1932 |
| BlpI | GCTNAGC | 2 cut(s) | 5, 420 |
| BlsI | GCNGC | 4 cut(s) | 1376, 1717, 1846, 1933 |
| BmcAI | AGTACT | 1 cut(s) | 1604 |
| Bme18I | GGWCC | 2 cut(s) | 186, 793 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 164 |
| BmeT110I | CYCGRG | 2 cut(s) | 595, 704 |
| BmgT120I | GGNCC | 6 cut(s) | 70, 71, 186, 702, 793, 1864 |
| BmrI | ACTGGG | 1 cut(s) | 1867 |
| BmsI | GCATC | 3 cut(s) | 163, 207, 1674 |
| BmuI | ACTGGG | 1 cut(s) | 1867 |
| BpiI | GAAGAC | 2 cut(s) | 1101, 1637 |
| Bpu10I | CCTNAGC | 1 cut(s) | 226 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 5, 420 |
| BpuEI | CTTGAG | 1 cut(s) | 1309 |
| BpuMI | CCSGG | 6 cut(s) | 48, 69, 596, 597, 705, 706 |
| BsaI | GGTCTC | 1 cut(s) | 122 |
| BsaJI | CCNNGG | 8 cut(s) | 246, 288, 595, 704, 705, 841, 1073, 1557 |
| BsaWI | WCCGGW | 4 cut(s) | 36, 113, 188, 795 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 86, 116, 183, 213, 1184, 1214, 2079, 2109 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 802, 1289 |
| Bse118I | RCCGGY | 3 cut(s) | 18, 113, 534 |
| Bse1I | ACTGG | 4 cut(s) | 91, 1660, 1683, 1862 |
| Bse21I | CCTNAGG | 1 cut(s) | 2072 |
| Bse3DI | GCAATG | 1 cut(s) | 1104 |
| BseAI | TCCGGA | 2 cut(s) | 188, 795 |
| BseBI | CCWGG | 4 cut(s) | 1236, 1344, 1558, 1958 |
| BseDI | CCNNGG | 8 cut(s) | 246, 288, 595, 704, 705, 841, 1073, 1557 |
| BseGI | GGATG | 6 cut(s) | 222, 256, 310, 1084, 1279, 1665 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 802, 1289 |
| BseMI | GCAATG | 1 cut(s) | 1104 |
| BseMII | CTCAG | 8 cut(s) | 19, 240, 411, 504, 530, 899, 1662, 2063 |
| BseNI | ACTGG | 4 cut(s) | 91, 1660, 1683, 1862 |
| BseRI | GAGGAG | 3 cut(s) | 347, 505, 1022 |
| BseSI | GKGCMC | 2 cut(s) | 74, 781 |
| BseXI | GCAGC | 1 cut(s) | 1702 |
| BseYI | CCCAGC | 2 cut(s) | 616, 995 |
| BsgI | GTGCAG | 2 cut(s) | 583, 1914 |
| Bsh1236I | CGCG | 2 cut(s) | 290, 1844 |
| BshFI | GGCC | 4 cut(s) | 72, 703, 1374, 1865 |
| BshNI | GGYRCC | 6 cut(s) | 710, 778, 1205, 1248, 1553, 1697 |
| BshTI | ACCGGT | 1 cut(s) | 113 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1354 |
| BsiHKCI | CYCGRG | 2 cut(s) | 595, 704 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 802, 1289 |
| BsmAI | GTCTC | 2 cut(s) | 122, 1275 |
| BsmI | GAATGC | 1 cut(s) | 1221 |
| BsnI | GGCC | 4 cut(s) | 72, 703, 1374, 1865 |
| Bso31I | GGTCTC | 1 cut(s) | 122 |
| BsoBI | CYCGRG | 2 cut(s) | 595, 704 |
| Bsp120I | GGGCCC | 1 cut(s) | 70 |
| Bsp1286I | GDGCHC | 3 cut(s) | 74, 781, 1354 |
| Bsp13I | TCCGGA | 2 cut(s) | 188, 795 |
| Bsp143I | GATC | 6 cut(s) | 339, 853, 902, 1810, 1963, 2067 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 5, 420 |
| Bsp19I | CCATGG | 2 cut(s) | 246, 1073 |
| BspANI | GGCC | 4 cut(s) | 72, 703, 1374, 1865 |
| BspCNI | CTCAG | 8 cut(s) | 18, 239, 412, 505, 531, 898, 1663, 2064 |
| BspEI | TCCGGA | 2 cut(s) | 188, 795 |
| BspFNI | CGCG | 2 cut(s) | 290, 1844 |
| BspHI | TCATGA | 1 cut(s) | 1492 |
| BspMI | ACCTGC | 1 cut(s) | 1886 |
| BspPI | GGATC | 4 cut(s) | 1958, 1971, 2062, 2075 |
| BspQI | GCTCTTC | 1 cut(s) | 1515 |
| BspT107I | GGYRCC | 6 cut(s) | 710, 778, 1205, 1248, 1553, 1697 |
| BspTI | CTTAAG | 1 cut(s) | 653 |
| BspTNI | GGTCTC | 1 cut(s) | 122 |
| BsrDI | GCAATG | 1 cut(s) | 1104 |
| BsrFI | RCCGGY | 3 cut(s) | 18, 113, 534 |
| BsrI | ACTGG | 4 cut(s) | 91, 1660, 1683, 1862 |
| BssAI | RCCGGY | 3 cut(s) | 18, 113, 534 |
| BssECI | CCNNGG | 8 cut(s) | 246, 288, 595, 704, 705, 841, 1073, 1557 |
| BssMI | GATC | 6 cut(s) | 339, 853, 902, 1810, 1963, 2067 |
| BssSI | CACGAG | 1 cut(s) | 694 |
| BssT1I | CCWWGG | 3 cut(s) | 246, 841, 1073 |
| Bst2BI | CACGAG | 1 cut(s) | 694 |
| Bst2UI | CCWGG | 4 cut(s) | 1236, 1344, 1558, 1958 |
| Bst4CI | ACNGT | 5 cut(s) | 268, 570, 604, 922, 1953 |
| Bst6I | CTCTTC | 4 cut(s) | 1135, 1278, 1281, 1515 |
| BstAFI | CTTAAG | 1 cut(s) | 653 |
| BstC8I | GCNNGC | 3 cut(s) | 882, 1842, 1849 |
| BstDEI | CTNAG | 8 cut(s) | 5, 226, 420, 513, 539, 885, 1671, 2072 |
| BstDSI | CCRYGG | 3 cut(s) | 246, 288, 1073 |
| BstF5I | GGATG | 6 cut(s) | 222, 256, 310, 1084, 1279, 1665 |
| BstFNI | CGCG | 2 cut(s) | 290, 1844 |
| BstH2I | RGCGCY | 1 cut(s) | 1002 |
| BstHHI | GCGC | 2 cut(s) | 466, 1001 |
| BstKTI | GATC | 6 cut(s) | 342, 856, 905, 1813, 1966, 2070 |
| BstMAI | GTCTC | 2 cut(s) | 122, 1275 |
| BstMBI | GATC | 6 cut(s) | 339, 853, 902, 1810, 1963, 2067 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 15, 24, 69, 344, 1358 |
| BstNI | CCWGG | 4 cut(s) | 1236, 1344, 1558, 1958 |
| BstNSI | RCATGY | 1 cut(s) | 1508 |
| BstSFI | CTRYAG | 1 cut(s) | 678 |
| BstSLI | GKGCMC | 2 cut(s) | 74, 781 |
| BstUI | CGCG | 2 cut(s) | 290, 1844 |
| BstV1I | GCAGC | 1 cut(s) | 1702 |
| BstV2I | GAAGAC | 2 cut(s) | 1101, 1637 |
| BstX2I | RGATCY | 4 cut(s) | 902, 1810, 1963, 2067 |
| BstYI | RGATCY | 4 cut(s) | 902, 1810, 1963, 2067 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2072 |
| BsuI | GTATCC | 1 cut(s) | 1350 |
| BsuRI | GGCC | 4 cut(s) | 72, 703, 1374, 1865 |
| BtgI | CCRYGG | 3 cut(s) | 246, 288, 1073 |
| BtsCI | GGATG | 6 cut(s) | 222, 256, 310, 1084, 1279, 1665 |
| BtsIMutI | CAGTG | 2 cut(s) | 918, 1855 |
| BveI | ACCTGC | 1 cut(s) | 1886 |
| Cac8I | GCNNGC | 3 cut(s) | 882, 1842, 1849 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1951 |
| CciI | TCATGA | 1 cut(s) | 1492 |
| CfoI | GCGC | 2 cut(s) | 466, 1001 |
| Cfr10I | RCCGGY | 3 cut(s) | 18, 113, 534 |
| Cfr13I | GGNCC | 6 cut(s) | 70, 71, 186, 702, 793, 1864 |
| Cfr42I | CCGCGG | 1 cut(s) | 291 |
| Cfr9I | CCCGGG | 2 cut(s) | 595, 704 |
| CseI | GACGC | 2 cut(s) | 609, 1131 |
| CsiI | ACCWGGT | 1 cut(s) | 1234 |
| Csp6I | GTAC | 6 cut(s) | 94, 600, 711, 1321, 1554, 1603 |
| CspAI | ACCGGT | 1 cut(s) | 113 |
| CviQI | GTAC | 6 cut(s) | 94, 600, 711, 1321, 1554, 1603 |
| DdeI | CTNAG | 8 cut(s) | 5, 226, 420, 513, 539, 885, 1671, 2072 |
| DpnI | GATC | 6 cut(s) | 341, 855, 904, 1812, 1965, 2069 |
| DpnII | GATC | 6 cut(s) | 339, 853, 902, 1810, 1963, 2067 |
| DraI | TTTAAA | 1 cut(s) | 1033 |
| DraIII | CACNNNGTG | 1 cut(s) | 1238 |
| DriI | GACNNNNNGTC | 1 cut(s) | 164 |
| EaeI | YGGCCR | 1 cut(s) | 1372 |
| Eam1104I | CTCTTC | 4 cut(s) | 1135, 1278, 1281, 1515 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 164 |
| EarI | CTCTTC | 4 cut(s) | 1135, 1278, 1281, 1515 |
| EciI | GGCGGA | 2 cut(s) | 5, 464 |
| Eco130I | CCWWGG | 3 cut(s) | 246, 841, 1073 |
| Eco24I | GRGCYC | 1 cut(s) | 74 |
| Eco31I | GGTCTC | 1 cut(s) | 122 |
| Eco47I | GGWCC | 2 cut(s) | 186, 793 |
| Eco47III | AGCGCT | 1 cut(s) | 1000 |
| Eco57I | CTGAAG | 1 cut(s) | 1305 |
| Eco81I | CCTNAGG | 1 cut(s) | 2072 |
| Eco88I | CYCGRG | 2 cut(s) | 595, 704 |
| EcoO109I | RGGNCCY | 1 cut(s) | 71 |
| EcoRI | GAATTC | 1 cut(s) | 914 |
| EcoRII | CCWGG | 4 cut(s) | 1234, 1342, 1556, 1956 |
| EcoT14I | CCWWGG | 3 cut(s) | 246, 841, 1073 |
| EcoT38I | GRGCYC | 1 cut(s) | 74 |
| ErhI | CCWWGG | 3 cut(s) | 246, 841, 1073 |
| FauI | CCCGC | 2 cut(s) | 756, 878 |
| FbaI | TGATCA | 1 cut(s) | 853 |
| FblI | GTMKAC | 2 cut(s) | 168, 301 |
| Fnu4HI | GCNGC | 4 cut(s) | 1375, 1716, 1845, 1932 |
| FokI | GGATG | 6 cut(s) | 229, 263, 297, 1091, 1266, 1652 |
| FriOI | GRGCYC | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 4 cut(s) | 1375, 1716, 1845, 1932 |
| FspBI | CTAG | 3 cut(s) | 971, 1229, 1830 |
| FspI | TGCGCA | 1 cut(s) | 465 |
| GlaI | GCGC | 2 cut(s) | 465, 1000 |
| GluI | GCNGC | 4 cut(s) | 1375, 1716, 1845, 1932 |
| GsaI | CCCAGC | 2 cut(s) | 620, 999 |
| HaeII | RGCGCY | 1 cut(s) | 1002 |
| HaeIII | GGCC | 4 cut(s) | 72, 703, 1374, 1865 |
| HgaI | GACGC | 2 cut(s) | 609, 1131 |
| HhaI | GCGC | 2 cut(s) | 466, 1001 |
| Hin6I | GCGC | 2 cut(s) | 464, 999 |
| HinP1I | GCGC | 2 cut(s) | 464, 999 |
| HincII | GTYRAC | 1 cut(s) | 169 |
| HindII | GTYRAC | 1 cut(s) | 169 |
| HindIII | AAGCTT | 1 cut(s) | 345 |
| HinfI | GANTC | 9 cut(s) | 284, 499, 692, 1127, 1193, 1241, 1465, 1685, 1869 |
| HphI | GGTGA | 6 cut(s) | 433, 936, 1250, 1304, 1670, 1868 |
| Hpy166II | GTNNAC | 3 cut(s) | 169, 302, 532 |
| Hpy188I | TCNGA | 4 cut(s) | 888, 1387, 1737, 1815 |
| Hpy8I | GTNNAC | 3 cut(s) | 169, 302, 532 |
| Hpy99I | CGWCG | 5 cut(s) | 90, 162, 170, 173, 1147 |
| HpyAV | CCTTC | 6 cut(s) | 109, 231, 718, 1174, 1596, 2043 |
| HpyCH4III | ACNGT | 5 cut(s) | 268, 570, 604, 922, 1953 |
| HpyCH4IV | ACGT | 3 cut(s) | 160, 1211, 1732 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 15, 24, 69, 344, 1358 |
| HpyF3I | CTNAG | 8 cut(s) | 5, 226, 420, 513, 539, 885, 1671, 2072 |
| HpySE526I | ACGT | 3 cut(s) | 160, 1211, 1732 |
| HspAI | GCGC | 2 cut(s) | 464, 999 |
| Kpn2I | TCCGGA | 2 cut(s) | 188, 795 |
| KpnI | GGTACC | 2 cut(s) | 714, 1557 |
| Ksp22I | TGATCA | 1 cut(s) | 853 |
| KspI | CCGCGG | 1 cut(s) | 291 |
| Kzo9I | GATC | 6 cut(s) | 339, 853, 902, 1810, 1963, 2067 |
| LguI | GCTCTTC | 1 cut(s) | 1515 |
| LmnI | GCTCC | 3 cut(s) | 39, 292, 2021 |
| Lsp1109I | GCAGC | 1 cut(s) | 1702 |
| LweI | GCATC | 3 cut(s) | 163, 207, 1674 |
| MabI | ACCWGGT | 1 cut(s) | 1234 |
| MaeI | CTAG | 3 cut(s) | 971, 1229, 1830 |
| MaeII | ACGT | 3 cut(s) | 160, 1211, 1732 |
| MaeIII | GTNAC | 2 cut(s) | 621, 942 |
| MalI | GATC | 6 cut(s) | 341, 855, 904, 1812, 1965, 2069 |
| MboI | GATC | 6 cut(s) | 339, 853, 902, 1810, 1963, 2067 |
| MboII | GAAGA | 7 cut(s) | 641, 1101, 1122, 1265, 1298, 1502, 1642 |
| MfeI | CAATTG | 1 cut(s) | 557 |
| MflI | RGATCY | 4 cut(s) | 902, 1810, 1963, 2067 |
| MhlI | GDGCHC | 3 cut(s) | 74, 781, 1354 |
| MlyI | GAGTC | 5 cut(s) | 278, 686, 1121, 1202, 1694 |
| MmeI | TCCRAC | 2 cut(s) | 1814, 2112 |
| MroI | TCCGGA | 2 cut(s) | 188, 795 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1097, 1254 |
| MspA1I | CMGCKG | 2 cut(s) | 230, 290 |
| MspCI | CTTAAG | 1 cut(s) | 653 |
| MunI | CAATTG | 1 cut(s) | 557 |
| Mva1269I | GAATGC | 1 cut(s) | 1221 |
| MvaI | CCWGG | 4 cut(s) | 1236, 1344, 1558, 1958 |
| MvnI | CGCG | 2 cut(s) | 290, 1844 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 15, 24, 69, 344, 1358 |
| NciI | CCSGG | 6 cut(s) | 48, 69, 596, 597, 705, 706 |
| NcoI | CCATGG | 2 cut(s) | 246, 1073 |
| NdeII | GATC | 6 cut(s) | 339, 853, 902, 1810, 1963, 2067 |
| NmuCI | GTSAC | 2 cut(s) | 621, 942 |
| NsbI | TGCGCA | 1 cut(s) | 465 |
| NspI | RCATGY | 1 cut(s) | 1508 |
| PagI | TCATGA | 1 cut(s) | 1492 |
| PciSI | GCTCTTC | 1 cut(s) | 1515 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 177, 1139 |
| PctI | GAATGC | 1 cut(s) | 1221 |
| PfeI | GAWTC | 4 cut(s) | 499, 1241, 1465, 1869 |
| PinAI | ACCGGT | 1 cut(s) | 113 |
| PkrI | GCNGC | 4 cut(s) | 1376, 1717, 1846, 1933 |
| PleI | GAGTC | 5 cut(s) | 278, 686, 1121, 1201, 1693 |
| PpsI | GAGTC | 5 cut(s) | 278, 686, 1121, 1201, 1693 |
| Psp6I | CCWGG | 4 cut(s) | 1234, 1342, 1556, 1956 |
| PspFI | CCCAGC | 2 cut(s) | 616, 995 |
| PspGI | CCWGG | 4 cut(s) | 1234, 1342, 1556, 1956 |
| PspOMI | GGGCCC | 1 cut(s) | 70 |
| PspPI | GGNCC | 6 cut(s) | 70, 71, 186, 702, 793, 1864 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1951 |
| PsuI | RGATCY | 4 cut(s) | 902, 1810, 1963, 2067 |
| RsaI | GTAC | 6 cut(s) | 95, 601, 712, 1322, 1555, 1604 |
| RsaNI | GTAC | 6 cut(s) | 94, 600, 711, 1321, 1554, 1603 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1097, 1254 |
| SacII | CCGCGG | 1 cut(s) | 291 |
| SalI | GTCGAC | 1 cut(s) | 167 |
| SapI | GCTCTTC | 1 cut(s) | 1515 |
| SatI | GCNGC | 4 cut(s) | 1375, 1716, 1845, 1932 |
| Sau3AI | GATC | 6 cut(s) | 339, 853, 902, 1810, 1963, 2067 |
| Sau96I | GGNCC | 6 cut(s) | 70, 71, 186, 702, 793, 1864 |
| ScaI | AGTACT | 1 cut(s) | 1604 |
| SchI | GAGTC | 5 cut(s) | 278, 686, 1121, 1202, 1694 |
| SduI | GDGCHC | 3 cut(s) | 74, 781, 1354 |
| SexAI | ACCWGGT | 1 cut(s) | 1234 |
| SfaNI | GCATC | 3 cut(s) | 163, 207, 1674 |
| SfcI | CTRYAG | 1 cut(s) | 678 |
| Sfr303I | CCGCGG | 1 cut(s) | 291 |
| SgrBI | CCGCGG | 1 cut(s) | 291 |
| SgrDI | CGTCGACG | 1 cut(s) | 167 |
| SinI | GGWCC | 2 cut(s) | 186, 793 |
| SmaI | CCCGGG | 2 cut(s) | 597, 706 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1097, 1254 |
| SmlI | CTYRAG | 2 cut(s) | 653, 1324 |
| SmoI | CTYRAG | 2 cut(s) | 653, 1324 |
| SpeI | ACTAGT | 1 cut(s) | 1829 |
| SspMI | CTAG | 3 cut(s) | 971, 1229, 1830 |
| StyI | CCWWGG | 3 cut(s) | 246, 841, 1073 |
| TaaI | ACNGT | 5 cut(s) | 268, 570, 604, 922, 1953 |
| TaiI | ACGT | 3 cut(s) | 163, 1214, 1735 |
| TaqI | TCGA | 4 cut(s) | 129, 157, 168, 180 |
| TatI | WGTACW | 2 cut(s) | 1320, 1602 |
| TauI | GCSGC | 3 cut(s) | 1377, 1847, 1934 |
| TfiI | GAWTC | 4 cut(s) | 499, 1241, 1465, 1869 |
| TscAI | CASTG | 2 cut(s) | 925, 1862 |
| TseFI | GTSAC | 2 cut(s) | 621, 942 |
| TseI | GCWGC | 1 cut(s) | 1715 |
| Tsp45I | GTSAC | 2 cut(s) | 621, 942 |
| TspGWI | ACGGA | 1 cut(s) | 1547 |
| TspMI | CCCGGG | 2 cut(s) | 595, 704 |
| TspRI | CASTG | 2 cut(s) | 925, 1862 |
| Vha464I | CTTAAG | 1 cut(s) | 653 |
| VpaK11BI | GGWCC | 2 cut(s) | 186, 793 |
| XapI | RAATTY | 7 cut(s) | 323, 549, 637, 820, 914, 2003, 2077 |
| XceI | RCATGY | 1 cut(s) | 1508 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1242, 1766, 2045 |
| XmaI | CCCGGG | 2 cut(s) | 595, 704 |
| XmiI | GTMKAC | 2 cut(s) | 168, 301 |
| XspI | CTAG | 3 cut(s) | 971, 1229, 1830 |
| ZrmI | AGTACT | 1 cut(s) | 1604 |