Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0014557

Physical Location & Seq

Genomic Coordinates Forward (+)

49126260 .. 49131913

Gene Structure 5654 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG361000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGCTCAGCCTCCTCCTCCGCAGCTCCGTCTCGAAGCTCCGGCTCCGACCCGCTAACATATCATGCAATTCGGACCCTCTCCCGACCCTTCGCAACTACTCCTCCACCGCCACCGGTCTCTATGGCTTCCGCCACTTAAACTCCCCCAAAGGCTTCCAACGCTTCGTCGACGACGCCATCGAAAGGTCCGGCGAGCTGGTTGAGTTCATTTCCGGGATGCCTTCGTCTGCTGAGATAATCAAAGCCATGGATGAGATTTCTAACACAGTCTGCTGTGTGGTAGACTCTGCAGAACTTTGTAGACATACTCATCCAAACAGGGAATTTGTTGAAGAGGCAAACAAAGCTTCAATGAGGATTAATGAATATCTACATTACTTGAATACAAATCATACTTTGTTTGATGCTGTGAGAAAAGCTGAACAAGAGGGCCATTTGCTCACCAAGGAAGCTCAAAGGGCGGCACATTACCTCCGCGTTGACTTTGAGAGGGGTGGAATTCATCTTCCTGCTGAGAAATTAGATAGAGTGAATCAGCTGAATATAAAAATTTCACAACTTTGCAAAGAGTTCAGTGAAAATATCATCATTGACCCAGGTACTGTGGATATATTTCCAGCATCACGTATGCCACAAAGTTTGCACCATCTTCTCAAGCCCATCTACCGATCCAGATCAGCAATTTCAAGGGAATCATTGGGGCACATGGGTGCCATGAAAGAAAAGGGTTTTCGTATACCAACAGATCCAAACACTTTATCTTCAGTTCTCCAATGGGCTTCAGATGATGAGGTCAGGAAATTGGCATATATGAAAGGAAATTCTGTACCTCATGCAAACCTTGGCGTTCTTGATAATCTTATAGCTACCCGCCATGAGCTAGCTCAGATAATGGGGTATAGATCTTATGCTGAATTTACCGTGAAACCTAACATGTCTTCATCACCAAAAGTTGTGATGTCTTTTTTGCAAGAGTTGAGCAAGATGGTTAGGCCGAGTGCTGATGAGGAGTCTAATAAAATTAAGGCCTTCAAGAGAGAAAAATGTGGTCAGACAGATGGAGACTTACAACCTTGGGATGAGGCATACTACACAGCAATGATGAAGTCTTCTGCATATGACTTTGACTCTTCAGTTGTAGCATCATACTTTTCTCTACCACAATGTATCGATGGTTTAAAAGTGCTGGTGGAATCCTTGTTTGGTGCAACGTTTCATAACGTGCCCATGGCACCAGGTGAATCATGGCATCCAGATGTGCTCAAAATGTCTCTCCATCATCCTGAAGAGGGTGATTTAGGGTATCTCTACCTTGATTTGTACTCAAGGAACGACAAGTATCCGGGGTGTGCTCATTTTGCAATTAAAGGTGGCCGCAGTGTTTCAGAAACAGAATATCAACTTCCTGTTGTTGCCCTTGTTTGCAATTTTTCTTCTTCACGTAATTCATCAACCGTGAGGCTAAATCATTGGGAATTGGAAACTCTGTTTCATGAGTTTGGACATGCTCTTCATTCGTTGCTTTCAAGAACGGACTATCAACACTTTTCAGGTACCAGAGTGGTTCTTGATTTAGCAGAAACACCATCCAACCTTTTTGAGTACTACGCTTGGGATTATCGAGTTTTGAAGACATTTGCCAAACATTATTCAACCGGGGAAATCATCCCAGAGAAGTTAGTAGATTCAATGCAGGGTGCAAGAAAGATGTTTGCTGCCACAGATTTGCAACGTCAGGTTTTTTATGCTGCTGTTGATCAAACATTGTTTGGGGAACAACCAACCCCACCGACAAGTTCTATTGTTGAGGATCTGAAAAGAGAGTATACTAGTTGGAAGCATGTGGAGGGCACAAACTGGCAGGCCCGATTCAATCACCTTCTGAATTACGGTGCAGGTTATTATAGTTACTTGTATGCCAAATGTTTTGCTGCTACGATATGGCAGAAGCTGTGTCAGGAAGATCCACTCTCGTTAACCACAGGAACCGCTTTAAGAACCAAATTCTTACAGCATGGCGGTGCCAAAGAACCAGATGATTTGTTAAATGGTCTTGTAGGAGATGGGATTCTAAGGGACTGTAATGGAGGATTAGTTCCTGATATTACCTGTCTTTGTAATGAAATGAAGTTTGAGAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004177 GO:0004222 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008238 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016787 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0034641 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

714

Amino Acids

80.6

Weight (kDa)

6.26

Isoelectric Point (pI)

44.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M3	PF01432	258 - 688	1.4e-115	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51540
fragaria_vesca	FvH4_7g27930 FvH4_7g27930
malus_domestica	MD07G1256400.v1.1
prunus_persica	Prupe.2G280500_v2.0.a1
pyrus_communis	pycom07g22930
rosa_chinensis	RchiOBHm_Chr1g0374891
rosa_laevigata	RLG00000026709
rosa_multiflora	Rmu_sc0003145.1_g000006 Rmu_sc0004947.1_g000033
rosa_roxburghii	Rroxscaffold_4G00283200
rosa_rugosa	Rorug01G0385600
rosa_samantha	Rh1AG397200 Rh1BG361000 Rh1CG374700 Rh1DG392000
rosa_wichuraiana	Rw1G035220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1886
Acc65I	GGTACC	1 cut(s)	1553
AccB1I	GGYRCC	4 cut(s)	710, 1231, 1553, 2021
AccI	GTMKAC	5 cut(s)	168, 282, 301, 736, 1826
AccII	CGCG	1 cut(s)	477
AclI	AACGTT	1 cut(s)	1211
AclWI	GGATC	4 cut(s)	663, 740, 1818, 1958
AcoI	YGGCCR	1 cut(s)	1372
AcsI	RAATTY	6 cut(s)	323, 498, 549, 820, 914, 2003
AcuI	CTGAAG	4 cut(s)	747, 765, 1116, 1305
AcyI	GRCGYC	1 cut(s)	174
AdeI	CACNNNGTG	1 cut(s)	1238
AfaI	GTAC	5 cut(s)	601, 828, 1322, 1555, 1604
AfiI	CCNNNNNNNGG	2 cut(s)	183, 1289
AflIII	ACRYGT	1 cut(s)	933
AgeI	ACCGGT	1 cut(s)	113
AhlI	ACTAGT	1 cut(s)	1829
AjnI	CCWGG	2 cut(s)	595, 1234
AjuI	GAANNNNNNNTTGG	2 cut(s)	1185, 1217
AleI	CACNNNNGTG	1 cut(s)	708
AloI	GAACNNNNNNTCC	2 cut(s)	2079, 2111
Alw21I	GWGCWC	2 cut(s)	1263, 1354
Alw26I	GTCTC	4 cut(s)	34, 122, 1056, 1275
AlwI	GGATC	4 cut(s)	663, 740, 1818, 1958
AlwNI	CAGNNNCTG	2 cut(s)	602, 1951
AoxI	GGCC	5 cut(s)	430, 992, 1026, 1372, 1863
ApeKI	GCWGC	4 cut(s)	21, 1715, 1748, 1931
ApoI	RAATTY	6 cut(s)	323, 498, 549, 820, 914, 2003
AseI	ATTAAT	1 cut(s)	360
AsiGI	ACCGGT	1 cut(s)	113
Asp718I	GGTACC	1 cut(s)	1553
AspS9I	GGNCC	4 cut(s)	73, 186, 430, 1864
AsuC2I	CCSGG	3 cut(s)	214, 1344, 1657
AsuHPI	GGTGA	5 cut(s)	433, 936, 1250, 1304, 1868
AsuNHI	GCTAGC	1 cut(s)	880
AvaII	GGWCC	2 cut(s)	73, 186
BaeGI	GKGCMC	3 cut(s)	705, 1227, 1853
BaeI	ACNNNNGTAYC	2 cut(s)	1545, 1578
BanI	GGYRCC	4 cut(s)	710, 1231, 1553, 2021
BbsI	GAAGAC	3 cut(s)	930, 1101, 1637
Bbv12I	GWGCWC	2 cut(s)	1263, 1354
BbvI	GCAGC	4 cut(s)	33, 1702, 1735, 1918
BccI	CCATC	9 cut(s)	185, 654, 668, 979, 1052, 1166, 1284, 1594, 2057
BciT130I	CCWGG	2 cut(s)	597, 1236
BciVI	GTATCC	1 cut(s)	1350
BclI	TGATCA	1 cut(s)	1756
BcnI	CCSGG	3 cut(s)	214, 1344, 1657
BcoDI	GTCTC	4 cut(s)	34, 122, 1056, 1275
BcuI	ACTAGT	1 cut(s)	1829
BfaI	CTAG	2 cut(s)	881, 1830
BfmI	CTRYAG	1 cut(s)	288
BfuAI	ACCTGC	1 cut(s)	1886
BfuI	GTATCC	1 cut(s)	1350
BglII	AGATCT	1 cut(s)	902
BisI	GCNGC	6 cut(s)	22, 462, 1375, 1716, 1749, 1932
BlpI	GCTNAGC	1 cut(s)	5
BlsI	GCNGC	6 cut(s)	23, 463, 1376, 1717, 1750, 1933
BmcAI	AGTACT	1 cut(s)	1604
Bme1390I	CCNGG	5 cut(s)	214, 597, 1236, 1344, 1657
Bme18I	GGWCC	2 cut(s)	73, 186
BmgT120I	GGNCC	4 cut(s)	73, 186, 430, 1864
BmiI	GGNNCC	7 cut(s)	44, 75, 712, 1233, 1555, 1987, 2023
BmrFI	CCNGG	5 cut(s)	214, 597, 1236, 1344, 1657
BmsI	GCATC	5 cut(s)	207, 394, 629, 1151, 1258
BmtI	GCTAGC	1 cut(s)	884
BpiI	GAAGAC	3 cut(s)	930, 1101, 1637
Bpu1102I	GCTNAGC	1 cut(s)	5
BpuEI	CTTGAG	2 cut(s)	638, 1309
BpuMI	CCSGG	3 cut(s)	214, 1344, 1657
Bsa29I	ATCGAT	1 cut(s)	1170
BsaAI	YACGTR	2 cut(s)	626, 1442
BsaBI	GATNNNNATC	1 cut(s)	673
BsaHI	GRCGYC	1 cut(s)	174
BsaI	GGTCTC	1 cut(s)	122
BsaJI	CCNNGG	8 cut(s)	246, 444, 595, 841, 1073, 1227, 1343, 1656
BsaWI	WCCGGW	1 cut(s)	113
BsaXI	ACNNNNNCTCC	8 cut(s)	86, 116, 125, 155, 456, 486, 2079, 2109
Bsc4I	CCNNNNNNNGG	2 cut(s)	183, 1289
Bse118I	RCCGGY	1 cut(s)	113
Bse1I	ACTGG	1 cut(s)	1862
Bse3DI	GCAATG	1 cut(s)	1104
Bse8I	GATNNNNATC	1 cut(s)	673
BseBI	CCWGG	2 cut(s)	597, 1236
BseCI	ATCGAT	1 cut(s)	1170
BseDI	CCNNGG	8 cut(s)	246, 444, 595, 841, 1073, 1227, 1343, 1656
BseGI	GGATG	8 cut(s)	222, 256, 310, 1084, 1249, 1279, 1586, 1665
BseJI	GATNNNNATC	1 cut(s)	673
BseLI	CCNNNNNNNGG	2 cut(s)	183, 1289
BseMI	GCAATG	1 cut(s)	1104
BseMII	CTCAG	4 cut(s)	19, 222, 504, 899
BseNI	ACTGG	1 cut(s)	1862
BseRI	GAGGAG	3 cut(s)	5, 91, 1022
BseSI	GKGCMC	3 cut(s)	705, 1227, 1853
BseXI	GCAGC	4 cut(s)	33, 1702, 1735, 1918
BsgI	GTGCAG	1 cut(s)	1914
Bsh1236I	CGCG	1 cut(s)	477
BshFI	GGCC	5 cut(s)	432, 994, 1028, 1374, 1865
BshNI	GGYRCC	4 cut(s)	710, 1231, 1553, 2021
BshTI	ACCGGT	1 cut(s)	113
BshVI	ATCGAT	1 cut(s)	1170
BsiHKAI	GWGCWC	2 cut(s)	1263, 1354
BsiSI	CCGG	6 cut(s)	40, 114, 189, 213, 1343, 1656
BslFI	GGGAC	1 cut(s)	2090
BslI	CCNNNNNNNGG	2 cut(s)	183, 1289
BsmAI	GTCTC	4 cut(s)	34, 122, 1056, 1275
BsmBI	CGTCTC	1 cut(s)	34
BsmFI	GGGAC	1 cut(s)	2090
BsnI	GGCC	5 cut(s)	432, 994, 1028, 1374, 1865
Bso31I	GGTCTC	1 cut(s)	122
Bsp1286I	GDGCHC	5 cut(s)	705, 1227, 1263, 1354, 1853
Bsp143I	GATC	7 cut(s)	668, 674, 745, 902, 1756, 1810, 1963
Bsp1720I	GCTNAGC	1 cut(s)	5
Bsp19I	CCATGG	2 cut(s)	246, 1227
BspANI	GGCC	5 cut(s)	432, 994, 1028, 1374, 1865
BspCNI	CTCAG	4 cut(s)	18, 223, 505, 898
BspDI	ATCGAT	1 cut(s)	1170
BspFNI	CGCG	1 cut(s)	477
BspHI	TCATGA	1 cut(s)	1492
BspLI	GGNNCC	7 cut(s)	44, 75, 712, 1233, 1555, 1987, 2023
BspMAI	CTGCAG	1 cut(s)	292
BspMI	ACCTGC	1 cut(s)	1886
BspOI	GCTAGC	1 cut(s)	884
BspPI	GGATC	4 cut(s)	663, 740, 1818, 1958
BspQI	GCTCTTC	1 cut(s)	1515
BspT107I	GGYRCC	4 cut(s)	710, 1231, 1553, 2021
BspTNI	GGTCTC	1 cut(s)	122
BsrDI	GCAATG	1 cut(s)	1104
BsrFI	RCCGGY	1 cut(s)	113
BsrI	ACTGG	1 cut(s)	1862
BssAI	RCCGGY	1 cut(s)	113
BssECI	CCNNGG	8 cut(s)	246, 444, 595, 841, 1073, 1227, 1343, 1656
BssMI	GATC	7 cut(s)	668, 674, 745, 902, 1756, 1810, 1963
BssNAI	GTATAC	2 cut(s)	737, 1827
BssNI	GRCGYC	1 cut(s)	174
BssT1I	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
Bst1107I	GTATAC	2 cut(s)	737, 1827
Bst2UI	CCWGG	2 cut(s)	597, 1236
Bst4CI	ACNGT	6 cut(s)	268, 604, 922, 1456, 1892, 2081
Bst6I	CTCTTC	5 cut(s)	327, 1135, 1281, 1515, 2132
BstACI	GRCGYC	1 cut(s)	174
BstBAI	YACGTR	2 cut(s)	626, 1442
BstC8I	GCNNGC	3 cut(s)	194, 882, 1863
BstDEI	CTNAG	5 cut(s)	5, 231, 513, 885, 2072
BstDSI	CCRYGG	2 cut(s)	246, 1227
BstF5I	GGATG	8 cut(s)	222, 256, 310, 1084, 1249, 1279, 1586, 1665
BstFNI	CGCG	1 cut(s)	477
BstKTI	GATC	7 cut(s)	671, 677, 748, 905, 1759, 1813, 1966
BstMAI	GTCTC	4 cut(s)	34, 122, 1056, 1275
BstMBI	GATC	7 cut(s)	668, 674, 745, 902, 1756, 1810, 1963
BstMWI	GCNNNNNNNGC	4 cut(s)	159, 344, 458, 1358
BstNI	CCWGG	2 cut(s)	597, 1236
BstNSI	RCATGY	3 cut(s)	937, 1508, 1844
BstSCI	CCNGG	5 cut(s)	212, 595, 1234, 1342, 1655
BstSFI	CTRYAG	1 cut(s)	288
BstSLI	GKGCMC	3 cut(s)	705, 1227, 1853
BstUI	CGCG	1 cut(s)	477
BstV1I	GCAGC	4 cut(s)	33, 1702, 1735, 1918
BstV2I	GAAGAC	3 cut(s)	930, 1101, 1637
BstX2I	RGATCY	4 cut(s)	745, 902, 1810, 1963
BstYI	RGATCY	4 cut(s)	745, 902, 1810, 1963
BstZ17I	GTATAC	2 cut(s)	737, 1827
Bsu15I	ATCGAT	1 cut(s)	1170
BsuI	GTATCC	1 cut(s)	1350
BsuRI	GGCC	5 cut(s)	432, 994, 1028, 1374, 1865
BsuTUI	ATCGAT	1 cut(s)	1170
BtgI	CCRYGG	2 cut(s)	246, 1227
BtsCI	GGATG	8 cut(s)	222, 256, 310, 1084, 1249, 1279, 1586, 1665
BtsI	GCAGTG	1 cut(s)	1384
BtsIMutI	CAGTG	2 cut(s)	580, 1384
BveI	ACCTGC	1 cut(s)	1886
Cac8I	GCNNGC	3 cut(s)	194, 882, 1863
CaiI	CAGNNNCTG	2 cut(s)	602, 1951
CciI	TCATGA	1 cut(s)	1492
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	4 cut(s)	73, 186, 430, 1864
ClaI	ATCGAT	1 cut(s)	1170
CseI	GACGC	1 cut(s)	182
CsiI	ACCWGGT	1 cut(s)	1234
Csp6I	GTAC	5 cut(s)	600, 827, 1321, 1554, 1603
CspAI	ACCGGT	1 cut(s)	113
CspCI	CAANNNNNGTGG	2 cut(s)	621, 656
CviQI	GTAC	5 cut(s)	600, 827, 1321, 1554, 1603
DdeI	CTNAG	5 cut(s)	5, 231, 513, 885, 2072
DpnI	GATC	7 cut(s)	670, 676, 747, 904, 1758, 1812, 1965
DpnII	GATC	7 cut(s)	668, 674, 745, 902, 1756, 1810, 1963
DraI	TTTAAA	1 cut(s)	1179
DraIII	CACNNNGTG	1 cut(s)	1238
EaeI	YGGCCR	1 cut(s)	1372
Eam1104I	CTCTTC	5 cut(s)	327, 1135, 1281, 1515, 2132
EarI	CTCTTC	5 cut(s)	327, 1135, 1281, 1515, 2132
EciI	GGCGGA	1 cut(s)	119
Eco130I	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
Eco147I	AGGCCT	1 cut(s)	1028
Eco31I	GGTCTC	1 cut(s)	122
Eco47I	GGWCC	2 cut(s)	73, 186
Eco57I	CTGAAG	4 cut(s)	747, 765, 1116, 1305
EcoRI	GAATTC	1 cut(s)	498
EcoRII	CCWGG	2 cut(s)	595, 1234
EcoT14I	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
ErhI	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
Esp3I	CGTCTC	1 cut(s)	34
FaqI	GGGAC	1 cut(s)	2090
FauI	CCCGC	2 cut(s)	58, 878
FauNDI	CATATG	1 cut(s)	1117
FbaI	TGATCA	1 cut(s)	1756
FblI	GTMKAC	5 cut(s)	168, 282, 301, 736, 1826
Fnu4HI	GCNGC	6 cut(s)	22, 462, 1375, 1716, 1749, 1932
FokI	GGATG	8 cut(s)	229, 263, 297, 1091, 1236, 1266, 1573, 1652
Fsp4HI	GCNGC	6 cut(s)	22, 462, 1375, 1716, 1749, 1932
FspBI	CTAG	2 cut(s)	881, 1830
GluI	GCNGC	6 cut(s)	22, 462, 1375, 1716, 1749, 1932
HaeIII	GGCC	5 cut(s)	432, 994, 1028, 1374, 1865
HapII	CCGG	6 cut(s)	40, 114, 189, 213, 1343, 1656
HgaI	GACGC	1 cut(s)	182
Hin1I	GRCGYC	1 cut(s)	174
HincII	GTYRAC	3 cut(s)	169, 481, 1977
HindII	GTYRAC	3 cut(s)	169, 481, 1977
HindIII	AAGCTT	1 cut(s)	345
HpaI	GTTAAC	1 cut(s)	1977
HpaII	CCGG	6 cut(s)	40, 114, 189, 213, 1343, 1656
HphI	GGTGA	5 cut(s)	433, 936, 1250, 1304, 1868
Hpy166II	GTNNAC	7 cut(s)	169, 283, 302, 481, 737, 1827, 1977
Hpy188I	TCNGA	8 cut(s)	47, 73, 784, 888, 1053, 1387, 1815, 1884
Hpy8I	GTNNAC	7 cut(s)	169, 283, 302, 481, 737, 1827, 1977
Hpy99I	CGWCG	3 cut(s)	170, 173, 176
HpyAV	CCTTC	4 cut(s)	98, 231, 1039, 1889
HpyCH4III	ACNGT	6 cut(s)	268, 604, 922, 1456, 1892, 2081
HpyCH4IV	ACGT	5 cut(s)	625, 1211, 1221, 1441, 1732
HpyF10VI	GCNNNNNNNGC	4 cut(s)	159, 344, 458, 1358
HpyF3I	CTNAG	5 cut(s)	5, 231, 513, 885, 2072
HpySE526I	ACGT	5 cut(s)	625, 1211, 1221, 1441, 1732
Hsp92I	GRCGYC	1 cut(s)	174
KpnI	GGTACC	1 cut(s)	1557
Ksp22I	TGATCA	1 cut(s)	1756
KspAI	GTTAAC	1 cut(s)	1977
Kzo9I	GATC	7 cut(s)	668, 674, 745, 902, 1756, 1810, 1963
LguI	GCTCTTC	1 cut(s)	1515
LmnI	GCTCC	3 cut(s)	29, 42, 48
Lsp1109I	GCAGC	4 cut(s)	33, 1702, 1735, 1918
LweI	GCATC	5 cut(s)	207, 394, 629, 1151, 1258
MabI	ACCWGGT	1 cut(s)	1234
MaeI	CTAG	2 cut(s)	881, 1830
MaeII	ACGT	5 cut(s)	625, 1211, 1221, 1441, 1732
MaeIII	GTNAC	1 cut(s)	1907
MalI	GATC	7 cut(s)	670, 676, 747, 904, 1758, 1812, 1965
MboI	GATC	7 cut(s)	668, 674, 745, 902, 1756, 1810, 1963
MflI	RGATCY	4 cut(s)	745, 902, 1810, 1963
MhlI	GDGCHC	5 cut(s)	705, 1227, 1263, 1354, 1853
MlyI	GAGTC	3 cut(s)	278, 1019, 1121
MmeI	TCCRAC	4 cut(s)	70, 181, 1614, 1814
MseI	TTAA	8 cut(s)	137, 360, 1023, 1178, 1365, 1976, 1994, 2045
MslI	CAYNNNNRTG	4 cut(s)	708, 1097, 1254, 2019
MspA1I	CMGCKG	1 cut(s)	538
MspI	CCGG	6 cut(s)	40, 114, 189, 213, 1343, 1656
MspR9I	CCNGG	5 cut(s)	214, 597, 1236, 1344, 1657
MvaI	CCWGG	2 cut(s)	597, 1236
MvnI	CGCG	1 cut(s)	477
MwoI	GCNNNNNNNGC	4 cut(s)	159, 344, 458, 1358
NciI	CCSGG	3 cut(s)	214, 1344, 1657
NcoI	CCATGG	2 cut(s)	246, 1227
NdeI	CATATG	1 cut(s)	1117
NdeII	GATC	7 cut(s)	668, 674, 745, 902, 1756, 1810, 1963
NheI	GCTAGC	1 cut(s)	880
NlaIV	GGNNCC	7 cut(s)	44, 75, 712, 1233, 1555, 1987, 2023
NmeAIII	GCCGAG	1 cut(s)	1020
NspI	RCATGY	3 cut(s)	937, 1508, 1844
OliI	CACNNNNGTG	1 cut(s)	708
PagI	TCATGA	1 cut(s)	1492
PceI	AGGCCT	1 cut(s)	1028
PciI	ACATGT	1 cut(s)	933
PciSI	GCTCTTC	1 cut(s)	1515
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PfeI	GAWTC	7 cut(s)	532, 692, 1193, 1241, 1685, 1869, 2068
PfoI	TCCNGGA	1 cut(s)	212
PinAI	ACCGGT	1 cut(s)	113
PkrI	GCNGC	6 cut(s)	23, 463, 1376, 1717, 1750, 1933
PleI	GAGTC	3 cut(s)	278, 1018, 1121
PpsI	GAGTC	3 cut(s)	278, 1018, 1121
Ppu21I	YACGTR	2 cut(s)	626, 1442
PscI	ACATGT	1 cut(s)	933
PshBI	ATTAAT	1 cut(s)	360
Psp1406I	AACGTT	1 cut(s)	1211
Psp6I	CCWGG	2 cut(s)	595, 1234
PspGI	CCWGG	2 cut(s)	595, 1234
PspN4I	GGNNCC	7 cut(s)	44, 75, 712, 1233, 1555, 1987, 2023
PspPI	GGNCC	4 cut(s)	73, 186, 430, 1864
PstI	CTGCAG	1 cut(s)	292
PstNI	CAGNNNCTG	2 cut(s)	602, 1951
PsuI	RGATCY	4 cut(s)	745, 902, 1810, 1963
PvuII	CAGCTG	1 cut(s)	538
RsaI	GTAC	5 cut(s)	601, 828, 1322, 1555, 1604
RsaNI	GTAC	5 cut(s)	600, 827, 1321, 1554, 1603
RseI	CAYNNNNRTG	4 cut(s)	708, 1097, 1254, 2019
SalI	GTCGAC	1 cut(s)	167
SapI	GCTCTTC	1 cut(s)	1515
SaqAI	TTAA	8 cut(s)	137, 360, 1023, 1178, 1365, 1976, 1994, 2045
SatI	GCNGC	6 cut(s)	22, 462, 1375, 1716, 1749, 1932
Sau3AI	GATC	7 cut(s)	668, 674, 745, 902, 1756, 1810, 1963
Sau96I	GGNCC	4 cut(s)	73, 186, 430, 1864
ScaI	AGTACT	1 cut(s)	1604
SchI	GAGTC	3 cut(s)	278, 1019, 1121
ScrFI	CCNGG	5 cut(s)	214, 597, 1236, 1344, 1657
SduI	GDGCHC	5 cut(s)	705, 1227, 1263, 1354, 1853
SexAI	ACCWGGT	1 cut(s)	1234
SfaNI	GCATC	5 cut(s)	207, 394, 629, 1151, 1258
SfcI	CTRYAG	1 cut(s)	288
SgrDI	CGTCGACG	1 cut(s)	167
SinI	GGWCC	2 cut(s)	73, 186
SmiMI	CAYNNNNRTG	4 cut(s)	708, 1097, 1254, 2019
SmlI	CTYRAG	2 cut(s)	653, 1324
SmoI	CTYRAG	2 cut(s)	653, 1324
SpeI	ACTAGT	1 cut(s)	1829
SseBI	AGGCCT	1 cut(s)	1028
SspMI	CTAG	2 cut(s)	881, 1830
StuI	AGGCCT	1 cut(s)	1028
StyD4I	CCNGG	5 cut(s)	212, 595, 1234, 1342, 1655
StyI	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
TaaI	ACNGT	6 cut(s)	268, 604, 922, 1456, 1892, 2081
TaiI	ACGT	5 cut(s)	628, 1214, 1224, 1444, 1735
TaqI	TCGA	5 cut(s)	32, 168, 180, 1170, 1621
TatI	WGTACW	2 cut(s)	1320, 1602
TauI	GCSGC	2 cut(s)	464, 1377
TfiI	GAWTC	7 cut(s)	532, 692, 1193, 1241, 1685, 1869, 2068
Tru1I	TTAA	8 cut(s)	137, 360, 1023, 1178, 1365, 1976, 1994, 2045
Tru9I	TTAA	8 cut(s)	137, 360, 1023, 1178, 1365, 1976, 1994, 2045
TscAI	CASTG	2 cut(s)	580, 1384
TseI	GCWGC	4 cut(s)	21, 1715, 1748, 1931
TspGWI	ACGGA	2 cut(s)	16, 1547
TspRI	CASTG	2 cut(s)	580, 1384
VpaK11BI	GGWCC	2 cut(s)	73, 186
VspI	ATTAAT	1 cut(s)	360
XapI	RAATTY	6 cut(s)	323, 498, 549, 820, 914, 2003
XceI	RCATGY	3 cut(s)	937, 1508, 1844
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1242
XmiI	GTMKAC	5 cut(s)	168, 282, 301, 736, 1826
XspI	CTAG	2 cut(s)	881, 1830
ZrmI	AGTACT	1 cut(s)	1604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.