Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0014557

Physical Location & Seq

Genomic Coordinates Forward (+)

61050215 .. 61056230

Gene Structure 6016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG392000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGCTCAGCCTCCTCCTCCGCAGCTCCGCCTCGAAGCTCCGGCTCCGACCCGCTTACATATCATGCAATTCGGACCCTCTCCCGACCCTTCGCAACTACTCCTCCACCTCCACCGGTCTCTATGGCTTCCGCCACTTAAACTCCCCCAAAGGCTTCCAACGCTTCGTCGACGACGCCATCGAAAGGTCCGGCGAGCTGGTTGAATTCATTTCCGGGATGCCTTCGTCAGCTGAGATAATCAAAGCCATGGATGAGATTTCTAACACAGTCTGCTGTGTGGTAGACTCTGCAGAACTTTGTAGACATACTCATCCAAACAGGGAATTTGTTGAAGAGGCAAACAAAGCTTCAATGAGGATTAATGAATATCTACATTACCTGAATACAAATCATACTTTGTTTGATGCTGTGAGAAAAGCTGAACAAGAGGGCCATTTGCTCACCAAGGAAGCTCAAAGGGCGGCACATTACCTCCGCGTTGACTTTGAGAGGGGTGGAATTCATCTTCCTGCTGAGAAATTAGATAGAGTGAATCAGCTGAATATAAAAATTTCACAACTTTGCAAAGAGTTCAGTGAAAATATCATCATTGACCCAGGTGCTGTGGATATATTTCCAGCGTCACGTATGCCACAAAGTTTGCACCATCTTCTCAAGCCCATCTACCGATCCAGATCTGCAATTTCAAGGGAATCATTGGGGCATATGGGTGCCATGAAAGAAAAGGGTTTTTGTATACCAACAGATCCAAACACTTTATCTTCAGTTCTCCAATGGGCTTCAGATGATGAGGTCAGGAAATTGGCATATATGAAAGGAAATTCTGTTCCTCATGCAAACCTTGGCGTTCTTGATAATCTTATAGCTACCCGCCATGAGCTAGCTCAGATAATGGGGTATAGATCTTATGCTGAATTTACAGTGAAACCTAACATGTCTTCATCACCAAAAGTTGTGATGTCTTTTTTGCAAGAGTTGAGCAAGATGGTTAGGCCGAGTGCTGACGAGGAGTTTAATAAAATTAAGGCCTTCAAGAGAGAAAAATGTGGTCAGACAGATGGAGACTTAGAACCTTGGGATGAGGCATACTACACAGCAATGATGAAGTCTTCTGCCTATGACTTTGACTCTTCAGTTGTAGCATCATACTTTTCTCTACCACAATGTATCGACGGTTTAAAAGTGCTGGTGGAATCCTTGTTTGGTGCAACGTTTCATAACGTGCCCATGGCACCAGGTGAATCATGGCATCCAGATGTGCTCAAAATGTCTCTCCATCATCCTGAAGAGGGTGATTTAGGGTATCTCTACCTTGATTTGTACTCAAGGAACGACAAGTATCCGGGGTGTGCTCATTTTGCAATTAAAGGTGGCTGCAGTGTTTCAGAAACAGAATATCAACTTCCTGTTGTTGCCCTTGTTTGCAATTTTTCTTCTTCACGTAATTCATCAACTGTGAGGCTAAATCATTGGGAATTGGAAACTCTGTTTCATGAGTTTGGGCATGCTCTTCATTCGTTGCTTTCAAGAACGGTATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004177 GO:0004222 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008238 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016787 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0034641 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

513

Amino Acids

57.79

Weight (kDa)

6.27

Isoelectric Point (pI)

47.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M3	PF01432	258 - 512	4e-65	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51540
fragaria_vesca	FvH4_7g27930 FvH4_7g27930
malus_domestica	MD07G1256400.v1.1
prunus_persica	Prupe.2G280500_v2.0.a1
pyrus_communis	pycom07g22930
rosa_chinensis	RchiOBHm_Chr1g0374891
rosa_laevigata	RLG00000026709
rosa_multiflora	Rmu_sc0003145.1_g000006 Rmu_sc0004947.1_g000033
rosa_roxburghii	Rroxscaffold_4G00283200
rosa_rugosa	Rorug01G0385600
rosa_samantha	Rh1AG397200 Rh1BG361000 Rh1CG374700 Rh1DG392000
rosa_wichuraiana	Rw1G035220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	710, 1231
AccI	GTMKAC	5 cut(s)	168, 282, 301, 736, 1536
AccII	CGCG	1 cut(s)	477
AciI	CCGC	7 cut(s)	19, 27, 51, 130, 461, 475, 871
AclI	AACGTT	1 cut(s)	1211
AclWI	GGATC	2 cut(s)	663, 740
AcsI	RAATTY	6 cut(s)	203, 323, 498, 549, 820, 914
AcuI	CTGAAG	4 cut(s)	747, 765, 1116, 1305
AcyI	GRCGYC	1 cut(s)	174
AdeI	CACNNNGTG	1 cut(s)	1238
AfaI	GTAC	1 cut(s)	1322
AfiI	CCNNNNNNNGG	2 cut(s)	183, 1289
AflIII	ACRYGT	1 cut(s)	933
AgeI	ACCGGT	1 cut(s)	113
AgsI	TTSAA	6 cut(s)	203, 332, 351, 687, 1033, 1527
AjnI	CCWGG	2 cut(s)	595, 1234
AjuI	GAANNNNNNNTTGG	2 cut(s)	1185, 1217
AloI	GAACNNNNNNTCC	2 cut(s)	810, 842
Alw21I	GWGCWC	2 cut(s)	1263, 1354
Alw26I	GTCTC	3 cut(s)	122, 1056, 1275
AlwI	GGATC	2 cut(s)	663, 740
AlwNI	CAGNNNCTG	1 cut(s)	602
AoxI	GGCC	3 cut(s)	430, 992, 1026
ApeKI	GCWGC	2 cut(s)	21, 1374
ApoI	RAATTY	6 cut(s)	203, 323, 498, 549, 820, 914
AseI	ATTAAT	1 cut(s)	360
AsiGI	ACCGGT	1 cut(s)	113
AspS9I	GGNCC	3 cut(s)	73, 186, 430
AsuC2I	CCSGG	2 cut(s)	214, 1344
AsuHPI	GGTGA	4 cut(s)	433, 936, 1250, 1304
AsuNHI	GCTAGC	1 cut(s)	880
AvaII	GGWCC	2 cut(s)	73, 186
BaeGI	GKGCMC	1 cut(s)	1227
BanI	GGYRCC	2 cut(s)	710, 1231
BbsI	GAAGAC	2 cut(s)	930, 1101
Bbv12I	GWGCWC	2 cut(s)	1263, 1354
BbvI	GCAGC	2 cut(s)	33, 1361
BccI	CCATC	6 cut(s)	185, 654, 668, 979, 1052, 1284
BciT130I	CCWGG	2 cut(s)	597, 1236
BciVI	GTATCC	1 cut(s)	1350
BcnI	CCSGG	2 cut(s)	214, 1344
BcoDI	GTCTC	3 cut(s)	122, 1056, 1275
BfaI	CTAG	2 cut(s)	881, 1540
BfmI	CTRYAG	2 cut(s)	288, 1375
BfuI	GTATCC	1 cut(s)	1350
BglII	AGATCT	2 cut(s)	674, 902
BisI	GCNGC	3 cut(s)	22, 462, 1375
BlpI	GCTNAGC	1 cut(s)	5
BlsI	GCNGC	3 cut(s)	23, 463, 1376
Bme1390I	CCNGG	4 cut(s)	214, 597, 1236, 1344
Bme18I	GGWCC	2 cut(s)	73, 186
BmgT120I	GGNCC	3 cut(s)	73, 186, 430
BmiI	GGNNCC	4 cut(s)	44, 75, 712, 1233
BmrFI	CCNGG	4 cut(s)	214, 597, 1236, 1344
BmsI	GCATC	4 cut(s)	207, 394, 1151, 1258
BmtI	GCTAGC	1 cut(s)	884
BpiI	GAAGAC	2 cut(s)	930, 1101
Bpu1102I	GCTNAGC	1 cut(s)	5
BpuEI	CTTGAG	2 cut(s)	638, 1309
BpuMI	CCSGG	2 cut(s)	214, 1344
BsaAI	YACGTR	2 cut(s)	626, 1442
BsaBI	GATNNNNATC	1 cut(s)	673
BsaHI	GRCGYC	1 cut(s)	174
BsaI	GGTCTC	1 cut(s)	122
BsaJI	CCNNGG	7 cut(s)	246, 444, 595, 841, 1073, 1227, 1343
BsaWI	WCCGGW	1 cut(s)	113
BsaXI	ACNNNNNCTCC	6 cut(s)	86, 116, 125, 155, 456, 486
Bsc4I	CCNNNNNNNGG	2 cut(s)	183, 1289
Bse118I	RCCGGY	1 cut(s)	113
Bse3DI	GCAATG	1 cut(s)	1104
Bse8I	GATNNNNATC	1 cut(s)	673
BseBI	CCWGG	2 cut(s)	597, 1236
BseDI	CCNNGG	7 cut(s)	246, 444, 595, 841, 1073, 1227, 1343
BseGI	GGATG	6 cut(s)	222, 256, 310, 1084, 1249, 1279
BseJI	GATNNNNATC	1 cut(s)	673
BseLI	CCNNNNNNNGG	2 cut(s)	183, 1289
BseMI	GCAATG	1 cut(s)	1104
BseMII	CTCAG	4 cut(s)	19, 222, 504, 899
BseRI	GAGGAG	3 cut(s)	5, 91, 1022
BseSI	GKGCMC	1 cut(s)	1227
BseXI	GCAGC	2 cut(s)	33, 1361
Bsh1236I	CGCG	1 cut(s)	477
BshFI	GGCC	3 cut(s)	432, 994, 1028
BshNI	GGYRCC	2 cut(s)	710, 1231
BshTI	ACCGGT	1 cut(s)	113
BsiHKAI	GWGCWC	2 cut(s)	1263, 1354
BsiSI	CCGG	5 cut(s)	40, 114, 189, 213, 1343
BslI	CCNNNNNNNGG	2 cut(s)	183, 1289
BsmAI	GTCTC	3 cut(s)	122, 1056, 1275
BsnI	GGCC	3 cut(s)	432, 994, 1028
Bso31I	GGTCTC	1 cut(s)	122
Bsp1286I	GDGCHC	3 cut(s)	1227, 1263, 1354
Bsp143I	GATC	4 cut(s)	668, 674, 745, 902
Bsp1720I	GCTNAGC	1 cut(s)	5
Bsp19I	CCATGG	2 cut(s)	246, 1227
BspACI	CCGC	7 cut(s)	19, 27, 51, 130, 461, 475, 871
BspANI	GGCC	3 cut(s)	432, 994, 1028
BspCNI	CTCAG	4 cut(s)	18, 223, 505, 898
BspFNI	CGCG	1 cut(s)	477
BspHI	TCATGA	1 cut(s)	1492
BspLI	GGNNCC	4 cut(s)	44, 75, 712, 1233
BspMAI	CTGCAG	2 cut(s)	292, 1379
BspOI	GCTAGC	1 cut(s)	884
BspPI	GGATC	2 cut(s)	663, 740
BspQI	GCTCTTC	1 cut(s)	1515
BspT107I	GGYRCC	2 cut(s)	710, 1231
BspTNI	GGTCTC	1 cut(s)	122
BsrDI	GCAATG	1 cut(s)	1104
BsrFI	RCCGGY	1 cut(s)	113
BssAI	RCCGGY	1 cut(s)	113
BssECI	CCNNGG	7 cut(s)	246, 444, 595, 841, 1073, 1227, 1343
BssMI	GATC	4 cut(s)	668, 674, 745, 902
BssNAI	GTATAC	2 cut(s)	737, 1537
BssNI	GRCGYC	1 cut(s)	174
BssT1I	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
Bst1107I	GTATAC	2 cut(s)	737, 1537
Bst2UI	CCWGG	2 cut(s)	597, 1236
Bst4CI	ACNGT	5 cut(s)	268, 922, 1175, 1456, 1534
Bst6I	CTCTTC	4 cut(s)	327, 1135, 1281, 1515
BstACI	GRCGYC	1 cut(s)	174
BstBAI	YACGTR	2 cut(s)	626, 1442
BstC8I	GCNNGC	3 cut(s)	194, 882, 1506
BstDEI	CTNAG	5 cut(s)	5, 231, 513, 885, 1066
BstDSI	CCRYGG	2 cut(s)	246, 1227
BstF5I	GGATG	6 cut(s)	222, 256, 310, 1084, 1249, 1279
BstFNI	CGCG	1 cut(s)	477
BstKTI	GATC	4 cut(s)	671, 677, 748, 905
BstMAI	GTCTC	3 cut(s)	122, 1056, 1275
BstMBI	GATC	4 cut(s)	668, 674, 745, 902
BstMWI	GCNNNNNNNGC	4 cut(s)	159, 344, 458, 1358
BstNI	CCWGG	2 cut(s)	597, 1236
BstNSI	RCATGY	2 cut(s)	937, 1508
BstSCI	CCNGG	4 cut(s)	212, 595, 1234, 1342
BstSFI	CTRYAG	2 cut(s)	288, 1375
BstSLI	GKGCMC	1 cut(s)	1227
BstUI	CGCG	1 cut(s)	477
BstV1I	GCAGC	2 cut(s)	33, 1361
BstV2I	GAAGAC	2 cut(s)	930, 1101
BstX2I	RGATCY	3 cut(s)	674, 745, 902
BstYI	RGATCY	3 cut(s)	674, 745, 902
BstZ17I	GTATAC	2 cut(s)	737, 1537
BsuI	GTATCC	1 cut(s)	1350
BsuRI	GGCC	3 cut(s)	432, 994, 1028
BtgI	CCRYGG	2 cut(s)	246, 1227
BtsCI	GGATG	6 cut(s)	222, 256, 310, 1084, 1249, 1279
BtsI	GCAGTG	1 cut(s)	1384
BtsIMutI	CAGTG	3 cut(s)	580, 927, 1384
Cac8I	GCNNGC	3 cut(s)	194, 882, 1506
CaiI	CAGNNNCTG	1 cut(s)	602
CciI	TCATGA	1 cut(s)	1492
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	3 cut(s)	73, 186, 430
CseI	GACGC	2 cut(s)	182, 609
CsiI	ACCWGGT	1 cut(s)	1234
Csp6I	GTAC	1 cut(s)	1321
CspAI	ACCGGT	1 cut(s)	113
CspCI	CAANNNNNGTGG	2 cut(s)	621, 656
CviQI	GTAC	1 cut(s)	1321
DdeI	CTNAG	5 cut(s)	5, 231, 513, 885, 1066
DpnI	GATC	4 cut(s)	670, 676, 747, 904
DpnII	GATC	4 cut(s)	668, 674, 745, 902
DraI	TTTAAA	1 cut(s)	1179
DraIII	CACNNNGTG	1 cut(s)	1238
Eam1104I	CTCTTC	4 cut(s)	327, 1135, 1281, 1515
EarI	CTCTTC	4 cut(s)	327, 1135, 1281, 1515
EciI	GGCGGA	2 cut(s)	16, 119
Eco130I	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
Eco147I	AGGCCT	1 cut(s)	1028
Eco31I	GGTCTC	1 cut(s)	122
Eco47I	GGWCC	2 cut(s)	73, 186
Eco57I	CTGAAG	4 cut(s)	747, 765, 1116, 1305
EcoRI	GAATTC	2 cut(s)	203, 498
EcoRII	CCWGG	2 cut(s)	595, 1234
EcoT14I	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
ErhI	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
FauI	CCCGC	2 cut(s)	58, 878
FauNDI	CATATG	1 cut(s)	705
FblI	GTMKAC	5 cut(s)	168, 282, 301, 736, 1536
Fnu4HI	GCNGC	3 cut(s)	22, 462, 1375
FokI	GGATG	6 cut(s)	229, 263, 297, 1091, 1236, 1266
Fsp4HI	GCNGC	3 cut(s)	22, 462, 1375
FspBI	CTAG	2 cut(s)	881, 1540
GluI	GCNGC	3 cut(s)	22, 462, 1375
HaeIII	GGCC	3 cut(s)	432, 994, 1028
HapII	CCGG	5 cut(s)	40, 114, 189, 213, 1343
HgaI	GACGC	2 cut(s)	182, 609
Hin1I	GRCGYC	1 cut(s)	174
HincII	GTYRAC	2 cut(s)	169, 481
HindII	GTYRAC	2 cut(s)	169, 481
HindIII	AAGCTT	1 cut(s)	345
HinfI	GANTC	6 cut(s)	284, 532, 692, 1127, 1193, 1241
HpaII	CCGG	5 cut(s)	40, 114, 189, 213, 1343
HphI	GGTGA	4 cut(s)	433, 936, 1250, 1304
Hpy166II	GTNNAC	6 cut(s)	169, 283, 302, 481, 737, 1537
Hpy188I	TCNGA	6 cut(s)	47, 73, 784, 888, 1053, 1387
Hpy188III	TCNNGA	9 cut(s)	82, 672, 796, 851, 1033, 1253, 1283, 1493, 1527
Hpy8I	GTNNAC	6 cut(s)	169, 283, 302, 481, 737, 1537
Hpy99I	CGWCG	4 cut(s)	170, 173, 176, 1175
HpyAV	CCTTC	3 cut(s)	98, 231, 1039
HpyCH4III	ACNGT	5 cut(s)	268, 922, 1175, 1456, 1534
HpyCH4IV	ACGT	4 cut(s)	625, 1211, 1221, 1441
HpyF10VI	GCNNNNNNNGC	4 cut(s)	159, 344, 458, 1358
HpyF3I	CTNAG	5 cut(s)	5, 231, 513, 885, 1066
HpySE526I	ACGT	4 cut(s)	625, 1211, 1221, 1441
Hsp92I	GRCGYC	1 cut(s)	174
Kzo9I	GATC	4 cut(s)	668, 674, 745, 902
LguI	GCTCTTC	1 cut(s)	1515
LmnI	GCTCC	3 cut(s)	29, 42, 48
Lsp1109I	GCAGC	2 cut(s)	33, 1361
LweI	GCATC	4 cut(s)	207, 394, 1151, 1258
MabI	ACCWGGT	1 cut(s)	1234
MaeI	CTAG	2 cut(s)	881, 1540
MaeII	ACGT	4 cut(s)	625, 1211, 1221, 1441
MaeIII	GTNAC	1 cut(s)	621
MalI	GATC	4 cut(s)	670, 676, 747, 904
MboI	GATC	4 cut(s)	668, 674, 745, 902
MflI	RGATCY	3 cut(s)	674, 745, 902
MhlI	GDGCHC	3 cut(s)	1227, 1263, 1354
MlyI	GAGTC	2 cut(s)	278, 1121
MmeI	TCCRAC	2 cut(s)	70, 181
MseI	TTAA	6 cut(s)	137, 360, 1014, 1023, 1178, 1365
MslI	CAYNNNNRTG	3 cut(s)	708, 1097, 1254
MspA1I	CMGCKG	2 cut(s)	230, 538
MspI	CCGG	5 cut(s)	40, 114, 189, 213, 1343
MspR9I	CCNGG	4 cut(s)	214, 597, 1236, 1344
MvaI	CCWGG	2 cut(s)	597, 1236
MvnI	CGCG	1 cut(s)	477
MwoI	GCNNNNNNNGC	4 cut(s)	159, 344, 458, 1358
NciI	CCSGG	2 cut(s)	214, 1344
NcoI	CCATGG	2 cut(s)	246, 1227
NdeI	CATATG	1 cut(s)	705
NdeII	GATC	4 cut(s)	668, 674, 745, 902
NheI	GCTAGC	1 cut(s)	880
NlaIV	GGNNCC	4 cut(s)	44, 75, 712, 1233
NmeAIII	GCCGAG	1 cut(s)	1020
NmuCI	GTSAC	1 cut(s)	621
NspI	RCATGY	2 cut(s)	937, 1508
PaeI	GCATGC	1 cut(s)	1508
PagI	TCATGA	1 cut(s)	1492
PceI	AGGCCT	1 cut(s)	1028
PciI	ACATGT	1 cut(s)	933
PciSI	GCTCTTC	1 cut(s)	1515
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PfeI	GAWTC	4 cut(s)	532, 692, 1193, 1241
PfoI	TCCNGGA	1 cut(s)	212
PinAI	ACCGGT	1 cut(s)	113
PkrI	GCNGC	3 cut(s)	23, 463, 1376
PleI	GAGTC	2 cut(s)	278, 1121
PpsI	GAGTC	2 cut(s)	278, 1121
Ppu21I	YACGTR	2 cut(s)	626, 1442
PscI	ACATGT	1 cut(s)	933
PshBI	ATTAAT	1 cut(s)	360
Psp1406I	AACGTT	1 cut(s)	1211
Psp6I	CCWGG	2 cut(s)	595, 1234
PspGI	CCWGG	2 cut(s)	595, 1234
PspN4I	GGNNCC	4 cut(s)	44, 75, 712, 1233
PspPI	GGNCC	3 cut(s)	73, 186, 430
PstI	CTGCAG	2 cut(s)	292, 1379
PstNI	CAGNNNCTG	1 cut(s)	602
PsuI	RGATCY	3 cut(s)	674, 745, 902
PvuII	CAGCTG	2 cut(s)	230, 538
RsaI	GTAC	1 cut(s)	1322
RsaNI	GTAC	1 cut(s)	1321
RseI	CAYNNNNRTG	3 cut(s)	708, 1097, 1254
SalI	GTCGAC	1 cut(s)	167
SapI	GCTCTTC	1 cut(s)	1515
SaqAI	TTAA	6 cut(s)	137, 360, 1014, 1023, 1178, 1365
SatI	GCNGC	3 cut(s)	22, 462, 1375
Sau3AI	GATC	4 cut(s)	668, 674, 745, 902
Sau96I	GGNCC	3 cut(s)	73, 186, 430
SchI	GAGTC	2 cut(s)	278, 1121
ScrFI	CCNGG	4 cut(s)	214, 597, 1236, 1344
SduI	GDGCHC	3 cut(s)	1227, 1263, 1354
SexAI	ACCWGGT	1 cut(s)	1234
SfaNI	GCATC	4 cut(s)	207, 394, 1151, 1258
SfcI	CTRYAG	2 cut(s)	288, 1375
SgrDI	CGTCGACG	1 cut(s)	167
SinI	GGWCC	2 cut(s)	73, 186
SmiMI	CAYNNNNRTG	3 cut(s)	708, 1097, 1254
SmlI	CTYRAG	2 cut(s)	653, 1324
SmoI	CTYRAG	2 cut(s)	653, 1324
SphI	GCATGC	1 cut(s)	1508
SseBI	AGGCCT	1 cut(s)	1028
SsiI	CCGC	7 cut(s)	19, 27, 51, 130, 461, 475, 871
SspMI	CTAG	2 cut(s)	881, 1540
StuI	AGGCCT	1 cut(s)	1028
StyD4I	CCNGG	4 cut(s)	212, 595, 1234, 1342
StyI	CCWWGG	5 cut(s)	246, 444, 841, 1073, 1227
TaaI	ACNGT	5 cut(s)	268, 922, 1175, 1456, 1534
TaiI	ACGT	4 cut(s)	628, 1214, 1224, 1444
TaqI	TCGA	4 cut(s)	32, 168, 180, 1170
TatI	WGTACW	1 cut(s)	1320
TauI	GCSGC	1 cut(s)	464
TfiI	GAWTC	4 cut(s)	532, 692, 1193, 1241
Tru1I	TTAA	6 cut(s)	137, 360, 1014, 1023, 1178, 1365
Tru9I	TTAA	6 cut(s)	137, 360, 1014, 1023, 1178, 1365
TscAI	CASTG	3 cut(s)	580, 927, 1384
TseFI	GTSAC	1 cut(s)	621
TseI	GCWGC	2 cut(s)	21, 1374
Tsp45I	GTSAC	1 cut(s)	621
TspRI	CASTG	3 cut(s)	580, 927, 1384
VpaK11BI	GGWCC	2 cut(s)	73, 186
VspI	ATTAAT	1 cut(s)	360
XapI	RAATTY	6 cut(s)	203, 323, 498, 549, 820, 914
XceI	RCATGY	2 cut(s)	937, 1508
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1242
XmiI	GTMKAC	5 cut(s)	168, 282, 301, 736, 1536
XspI	CTAG	2 cut(s)	881, 1540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.