Prupe.2G325400_v2.0.a1

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
30071919 .. 30074963
3045 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G325400.2

Sequence Viewer

Length: 471 bp
ATGGCGACGGTGGTGAAGAGCGTTGTGAAGGCGATCAGAGAGAGAGGTCTCCGCACCTTCTTAAAGGAGCTAAAGGAAGATGGCTACGCAAACTGCATTTTCGATGGAAACCTTCTGCAAACTAAAATCCACAACATTGGGGCAAGGCTTGTAGGTGTTGATAAAATTGGCAATAAATATTATGAGAAGCTTGACACTCAATATGGAAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGCTACAATGCTTCTCAAGTACCACCAGAATGGCATGGTTGGCTGCACTACATAACTGATCGTACAGGGGATGAGCTTCTGATGCTAAGACCAAAGAGGTATGGCATTGAACACAAAGAAAATTTCACTGGTGAGGGTGATGAGTTTATATACCATTCCAAAGGGCACAGCCTGAATCCAGGCCAGAGAGACTGGACCAGGTACCAACCGTGGCAACCAACCAAGCCTTGA

Protein Analysis

157

Amino Acids

18.35

Weight (kDa)

9.23

Isoelectric Point (pI)

32.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013227)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 441
AccB1I GGYRCC 1 cut(s) 441
AciI CCGC 1 cut(s) 52
AcsI RAATTY 1 cut(s) 361
AfaI GTAC 3 cut(s) 261, 304, 443
AgsI TTSAA 2 cut(s) 224, 350
AjnI CCWGG 2 cut(s) 418, 437
AluBI AGCT 3 cut(s) 70, 190, 316
AluI AGCT 3 cut(s) 70, 190, 316
Alw26I GTCTC 2 cut(s) 53, 423
AoxI GGCC 1 cut(s) 421
ApeKI GCWGC 1 cut(s) 283
ApoI RAATTY 1 cut(s) 361
Asp718I GGTACC 1 cut(s) 441
AspS9I GGNCC 1 cut(s) 435
AsuHPI GGTGA 3 cut(s) 25, 383, 389
AvaII GGWCC 1 cut(s) 435
BaeGI GKGCMC 1 cut(s) 408
BanI GGYRCC 1 cut(s) 441
BarI GAAGNNNNNNTAC 2 cut(s) 227, 259
BbsI GAAGAC 1 cut(s) 214
BbvI GCAGC 1 cut(s) 270
BccI CCATC 2 cut(s) 74, 98
BciT130I CCWGG 2 cut(s) 420, 439
BcoDI GTCTC 2 cut(s) 53, 423
BisI GCNGC 1 cut(s) 284
BlsI GCNGC 1 cut(s) 285
Bme1390I CCNGG 2 cut(s) 420, 439
Bme18I GGWCC 1 cut(s) 435
BmgT120I GGNCC 1 cut(s) 435
BmiI GGNNCC 1 cut(s) 443
BmrFI CCNGG 2 cut(s) 420, 439
BmsI GCATC 1 cut(s) 312
BpiI GAAGAC 1 cut(s) 214
BpuEI CTTGAG 1 cut(s) 240
BsaI GGTCTC 1 cut(s) 53
BsaJI CCNNGG 1 cut(s) 449
Bse1I ACTGG 2 cut(s) 373, 437
BseBI CCWGG 2 cut(s) 420, 439
BseDI CCNNGG 1 cut(s) 449
BseGI GGATG 1 cut(s) 316
BseNI ACTGG 2 cut(s) 373, 437
BseSI GKGCMC 1 cut(s) 408
BseXI GCAGC 1 cut(s) 270
BsgI GTGCAG 1 cut(s) 269
BshFI GGCC 1 cut(s) 423
BshNI GGYRCC 1 cut(s) 441
BsmAI GTCTC 2 cut(s) 53, 423
BsnI GGCC 1 cut(s) 423
Bso31I GGTCTC 1 cut(s) 53
Bsp1286I GDGCHC 1 cut(s) 408
Bsp143I GATC 2 cut(s) 33, 298
BspACI CCGC 1 cut(s) 52
BspANI GGCC 1 cut(s) 423
BspLI GGNNCC 1 cut(s) 443
BspQI GCTCTTC 1 cut(s) 11
BspT107I GGYRCC 1 cut(s) 441
BspTNI GGTCTC 1 cut(s) 53
BsrI ACTGG 2 cut(s) 373, 437
BssECI CCNNGG 1 cut(s) 449
BssMI GATC 2 cut(s) 33, 298
Bst2UI CCWGG 2 cut(s) 420, 439
Bst4CI ACNGT 2 cut(s) 10, 450
Bst6I CTCTTC 1 cut(s) 11
BstDEI CTNAG 1 cut(s) 326
BstDSI CCRYGG 1 cut(s) 449
BstF5I GGATG 1 cut(s) 316
BstKTI GATC 2 cut(s) 36, 301
BstMAI GTCTC 2 cut(s) 53, 423
BstMBI GATC 2 cut(s) 33, 298
BstMWI GCNNNNNNNGC 2 cut(s) 280, 322
BstNI CCWGG 2 cut(s) 420, 439
BstSCI CCNGG 2 cut(s) 418, 437
BstSLI GKGCMC 1 cut(s) 408
BstV1I GCAGC 1 cut(s) 270
BstV2I GAAGAC 1 cut(s) 214
BstXI CCANNNNNNTGG 2 cut(s) 137, 270
BsuRI GGCC 1 cut(s) 423
BtgI CCRYGG 1 cut(s) 449
BtsCI GGATG 1 cut(s) 316
BtsIMutI CAGTG 1 cut(s) 366
Cfr13I GGNCC 1 cut(s) 435
CsiI ACCWGGT 1 cut(s) 437
Csp6I GTAC 3 cut(s) 260, 303, 442
CviAII CATG 1 cut(s) 275
CviJI RGCY 9 cut(s) 70, 84, 148, 190, 283, 316, 411, 423, 466
CviKI_1 RGCY 9 cut(s) 70, 84, 148, 190, 283, 316, 411, 423, 466
CviQI GTAC 3 cut(s) 260, 303, 442
DdeI CTNAG 1 cut(s) 326
DpnI GATC 2 cut(s) 35, 300
DpnII GATC 2 cut(s) 33, 298
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
Eco31I GGTCTC 1 cut(s) 53
Eco47I GGWCC 1 cut(s) 435
EcoRII CCWGG 2 cut(s) 418, 437
FaeI CATG 1 cut(s) 278
FaiI YATR 8 cut(s) 183, 204, 228, 276, 293, 342, 389, 391
FatI CATG 1 cut(s) 274
Fnu4HI GCNGC 1 cut(s) 284
FokI GGATG 1 cut(s) 323
Fsp4HI GCNGC 1 cut(s) 284
GluI GCNGC 1 cut(s) 284
HaeIII GGCC 1 cut(s) 423
Hin1II CATG 1 cut(s) 278
HindIII AAGCTT 1 cut(s) 188
HinfI GANTC 1 cut(s) 415
HphI GGTGA 3 cut(s) 25, 383, 389
Hpy188I TCNGA 2 cut(s) 38, 321
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 4 cut(s) 22, 67, 122, 229
HpyCH4III ACNGT 2 cut(s) 10, 450
HpyCH4V TGCA 4 cut(s) 96, 118, 230, 286
HpyF10VI GCNNNNNNNGC 2 cut(s) 280, 322
HpyF3I CTNAG 1 cut(s) 326
Hsp92II CATG 1 cut(s) 278
KpnI GGTACC 1 cut(s) 445
Kzo9I GATC 2 cut(s) 33, 298
LguI GCTCTTC 1 cut(s) 11
LmnI GCTCC 1 cut(s) 67
Lsp1109I GCAGC 1 cut(s) 270
LweI GCATC 1 cut(s) 312
MabI ACCWGGT 1 cut(s) 437
MalI GATC 2 cut(s) 35, 300
MboI GATC 2 cut(s) 33, 298
MboII GAAGA 3 cut(s) 28, 89, 219
MhlI GDGCHC 1 cut(s) 408
MluCI AATT 2 cut(s) 165, 361
MnlI CCTC 3 cut(s) 38, 330, 367
MseI TTAA 1 cut(s) 62
MslI CAYNNNNRTG 1 cut(s) 268
MspR9I CCNGG 2 cut(s) 420, 439
MvaI CCWGG 2 cut(s) 420, 439
MwoI GCNNNNNNNGC 2 cut(s) 280, 322
NdeII GATC 2 cut(s) 33, 298
NlaIII CATG 1 cut(s) 278
NlaIV GGNNCC 1 cut(s) 443
PciSI GCTCTTC 1 cut(s) 11
PfeI GAWTC 1 cut(s) 415
PkrI GCNGC 1 cut(s) 285
Psp6I CCWGG 2 cut(s) 418, 437
PspGI CCWGG 2 cut(s) 418, 437
PspN4I GGNNCC 1 cut(s) 443
PspPI GGNCC 1 cut(s) 435
RsaI GTAC 3 cut(s) 261, 304, 443
RsaNI GTAC 3 cut(s) 260, 303, 442
RseI CAYNNNNRTG 1 cut(s) 268
SapI GCTCTTC 1 cut(s) 11
SaqAI TTAA 1 cut(s) 62
SatI GCNGC 1 cut(s) 284
Sau3AI GATC 2 cut(s) 33, 298
Sau96I GGNCC 1 cut(s) 435
ScrFI CCNGG 2 cut(s) 420, 439
SduI GDGCHC 1 cut(s) 408
SexAI ACCWGGT 1 cut(s) 437
SfaNI GCATC 1 cut(s) 312
SinI GGWCC 1 cut(s) 435
SmiMI CAYNNNNRTG 1 cut(s) 268
SmlI CTYRAG 1 cut(s) 255
SmoI CTYRAG 1 cut(s) 255
Sse9I AATT 2 cut(s) 165, 361
SsiI CCGC 1 cut(s) 52
SspI AATATT 1 cut(s) 179
StyD4I CCNGG 2 cut(s) 418, 437
TaaI ACNGT 2 cut(s) 10, 450
TaqI TCGA 1 cut(s) 102
TasI AATT 2 cut(s) 165, 361
TfiI GAWTC 1 cut(s) 415
Tru1I TTAA 1 cut(s) 62
Tru9I TTAA 1 cut(s) 62
TscAI CASTG 1 cut(s) 373
TseI GCWGC 1 cut(s) 283
TspRI CASTG 1 cut(s) 373
VpaK11BI GGWCC 1 cut(s) 435
XapI RAATTY 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.