Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0010241

Physical Location & Seq

Genomic Coordinates Reverse (-)

462969 .. 465064

Gene Structure 2096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G007500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGACCAAGTCCTTTTTCTTCAAACCATTTTTCTTTTTATATCGGATTTTCTTTCGGAAACTCAAAGGTTTCCCTATGAGTGTGAGCAGCAGCCATCATGCAAGCTCAAGCCAGTCTAAAAATGATAAGTTCTTCGGTTCTCTTTATTCCCACAAATCAGACCTCTCAAACCAAACCCTGATCATCTTCAATTTCGAAGGAGCTTTGCTGAAATCCTCTTCTTTGTTTGATTACTTCATGCTCGTGGCGTTTGAAGCCGGAGGCTTGTTAAGGTCACTTGTTCTCTTTCTTCTGTACCCTCTTATATGTTTGGTGAGTGAAGAAATTGGGTTGAAGATAATGGTCATGGTCTGCTTCTTTGGGCTCAAGAAAGATAGCTTCAGAGTTGGGACGGCTGTGTTGCCTAAGTTCTTCTTTGAAGACGTTGGGTTGGAAGCCTTTGAGGTTTTACAAAGAGCTGGGAAGAAAGTTGGTGTTAGTAATCTTCCTCGAGTAATGATTGAGAGCTTCTTAAAAGACTATTTAGAGATAGATGTGGTAGTTGGGAAGGAGCTAAAGGTGTTTTGTGGATACTTTTTGGGTCTCATGGAAGAAAAGGAGAACAACGTTTTGCCTGTTTTGGAAGAACATGATGGGGAGGACATGGGTTTTGACATAATTGGCATCACTGCCTCCAACAAATTTCATGATGACCAATTGTTCTATTATTGCAAGGATGTTTACTTGGTGGGGAACTCAGATAAGAGGAGCTCGAAGAAGCTGCCAAGAGACAGATACCCGAAGAAACTTGTGTTCCACGATGGTAGGTTAGCTCTCAAACCGAACCCACTGGATACAATCGCCATATTGATGTGGGTCCCAATTGGAATTGCCCTAGCAATCTTCAGAATCATAGTCGGCATATCACTGCCTTACGGCGTGTCGTTACCTATACTATGTTTCAGTGGTCTGCGGTTGACTGTGAATGATAATACAAAACGCGAGAGCCAAAGCATTAATTCTCATCGTTCACTTCCAAACGACAAGCCCAAAGGTGTCCTTTACGTTTGTAACCACAGAACACTCCTAGACCCTCTATACGTTTGCTTCGCATTGAAGAAAAATCTCCACGCAGTAACGTACAGCCTAAGCAAAATGTCTGAGATTCTCTCACCAATCAAGACTGTTAGATTGACAAGGAACCGCCATCAAGATGCCGAGATGATGGAAAGGCTGATGAATGAAGGGGACGTGGTTGTTTGCCCCGAAGGAACGACATGTCGTGAACCCTACCTCCTTAGGTTTAGCCCTTTGTTTTCAGAAATCAGTGATGAAATAGTACCTGTTGCAGTTGACACTCATGTCTCCATGTTCCATGGTACGACTGCTGGTGGGCTCAAGTGCTTGGATCCACTTTTCTTCATGATGAACCCCTCAGCAATCTACACCGTTCAGTTGCTGGATAGGGTATCTGGGCTGTCTTGCTGTCGTGATGGGAGTAGATCAAGCATTGATGTGGCTAATTACGTGCAAGGTGAAGTTGGTAGGGCATTGGGGTTTGAATGCACCAAGTTCACAAGGAGAGATAAATATTTTATTTTGGCTGGGAATGAAGGTATTGCTTGTAAAAGTAATCAGCCTTTAAAATTCGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009059 GO:0009987 GO:0010143 GO:0016020 GO:0016311 GO:0016740 GO:0016746 GO:0016747 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0043170 GO:0044237 GO:0071704 GO:0090447 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

545

Amino Acids

61.47

Weight (kDa)

8.59

Isoelectric Point (pI)

36.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010241)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02390 AT4G01950 AT4G01950
fragaria_vesca	FvH4_1g26880
malus_domestica	MD09G1285900.v1.1 MD17G1278500.v1.1
prunus_persica	Prupe.3G007500_v2.0.a1
pyrus_communis	pycom09g19320 pycom17g27610
rosa_chinensis	RchiOBHm_Chr3g0487121
rosa_laevigata	RLG00000023031
rosa_multiflora	Rmu_sc0003329.1_g000010 Rmu_sc0008479.1_g000005 Rmu_sc0032997.1_g000001
rosa_roxburghii	Rroxscaffold_6G00395170
rosa_rugosa	Rorug03G0231400
rosa_samantha	Rh3AG279500 Rh3BG315500 Rh3CG313800 Rh3DG310600
rosa_wichuraiana	Rw3G024770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1340
AccII	CGCG	1 cut(s)	981
AciI	CCGC	2 cut(s)	952, 1183
AclI	AACGTT	1 cut(s)	606
AclWI	GGATC	2 cut(s)	1382, 1395
AcsI	RAATTY	2 cut(s)	680, 1625
AcuI	CTGAAG	2 cut(s)	364, 868
AfaI	GTAC	4 cut(s)	296, 1121, 1320, 1360
AflIII	ACRYGT	1 cut(s)	1256
AgsI	TTSAA	7 cut(s)	22, 190, 254, 334, 419, 1096, 1541
AjiI	CACGTC	1 cut(s)	1231
AjuI	GAANNNNNNNTTGG	1 cut(s)	31
AloI	GAACNNNNNNTCC	2 cut(s)	1257, 1289
AluBI	AGCT	9 cut(s)	105, 203, 378, 458, 507, 553, 750, 760, 812
AluI	AGCT	9 cut(s)	105, 203, 378, 458, 507, 553, 750, 760, 812
Alw21I	GWGCWC	1 cut(s)	752
Alw26I	GTCTC	3 cut(s)	587, 762, 1348
AlwI	GGATC	2 cut(s)	1382, 1395
AlwNI	CAGNNNCTG	1 cut(s)	1438
Ama87I	CYCGRG	1 cut(s)	489
ApeKI	GCWGC	3 cut(s)	87, 90, 760
ApoI	RAATTY	2 cut(s)	680, 1625
ArsI	GACNNNNNNTTYG	2 cut(s)	632, 664
AseI	ATTAAT	1 cut(s)	996
AspS9I	GGNCC	1 cut(s)	856
AsuHPI	GGTGA	3 cut(s)	325, 1143, 1526
AsuII	TTCGAA	1 cut(s)	195
AvaI	CYCGRG	1 cut(s)	489
AvaII	GGWCC	1 cut(s)	856
AxyI	CCTNAGG	1 cut(s)	1277
BamHI	GGATCC	1 cut(s)	1387
BanII	GRGCYC	3 cut(s)	366, 752, 1377
BauI	CACGAG	1 cut(s)	242
BbsI	GAAGAC	1 cut(s)	426
Bbv12I	GWGCWC	1 cut(s)	752
BbvCI	CCTCAGC	1 cut(s)	1414
BbvI	GCAGC	3 cut(s)	99, 102, 747
BccI	CCATC	6 cut(s)	102, 626, 794, 1194, 1198, 1466
BceAI	ACGGC	2 cut(s)	408, 931
BcgI	CGANNNNNNTGC	2 cut(s)	742, 776
BciVI	GTATCC	2 cut(s)	563, 826
BclI	TGATCA	1 cut(s)	180
BcoDI	GTCTC	3 cut(s)	587, 762, 1348
BfaI	CTAG	2 cut(s)	875, 1067
BfuI	GTATCC	2 cut(s)	563, 826
BisI	GCNGC	3 cut(s)	88, 91, 761
BlsI	GCNGC	3 cut(s)	89, 92, 762
Bme18I	GGWCC	1 cut(s)	856
BmeT110I	CYCGRG	1 cut(s)	489
BmgBI	CACGTC	1 cut(s)	1231
BmgT120I	GGNCC	1 cut(s)	856
BmiI	GGNNCC	4 cut(s)	857, 858, 1181, 1389
BmsI	GCATC	2 cut(s)	672, 1183
BpiI	GAAGAC	1 cut(s)	426
BplI	GAGNNNNNCTC	2 cut(s)	1133, 1165
Bpu10I	CCTNAGC	2 cut(s)	1127, 1414
Bpu14I	TTCGAA	1 cut(s)	195
BpuEI	CTTGAG	3 cut(s)	91, 350, 1361
BsaAI	YACGTR	1 cut(s)	1507
BsaI	GGTCTC	1 cut(s)	587
BsaJI	CCNNGG	1 cut(s)	1354
BsaXI	ACNNNNNCTCC	2 cut(s)	1257, 1287
Bse1I	ACTGG	2 cut(s)	112, 834
Bse21I	CCTNAGG	1 cut(s)	1277
BseDI	CCNNGG	1 cut(s)	1354
BseGI	GGATG	1 cut(s)	721
BseMII	CTCAG	3 cut(s)	750, 1131, 1428
BseNI	ACTGG	2 cut(s)	112, 834
BseRI	GAGGAG	1 cut(s)	760
BseXI	GCAGC	3 cut(s)	99, 102, 747
BseYI	CCCAGC	2 cut(s)	458, 1583
Bsh1236I	CGCG	1 cut(s)	981
BsiHKAI	GWGCWC	1 cut(s)	752
BsiHKCI	CYCGRG	1 cut(s)	489
BsiSI	CCGG	1 cut(s)	258
BslFI	GGGAC	3 cut(s)	403, 842, 1241
BsmAI	GTCTC	3 cut(s)	587, 762, 1348
BsmFI	GGGAC	3 cut(s)	403, 842, 1241
BsmI	GAATGC	1 cut(s)	1547
Bso31I	GGTCTC	1 cut(s)	587
BsoBI	CYCGRG	1 cut(s)	489
Bsp119I	TTCGAA	1 cut(s)	195
Bsp1286I	GDGCHC	3 cut(s)	366, 752, 1377
Bsp143I	GATC	3 cut(s)	180, 1387, 1481
Bsp19I	CCATGG	1 cut(s)	1354
BspACI	CCGC	2 cut(s)	952, 1183
BspCNI	CTCAG	3 cut(s)	749, 1132, 1427
BspFNI	CGCG	1 cut(s)	981
BspHI	TCATGA	2 cut(s)	685, 1401
BspLI	GGNNCC	4 cut(s)	857, 858, 1181, 1389
BspPI	GGATC	2 cut(s)	1382, 1395
BspT104I	TTCGAA	1 cut(s)	195
BspTNI	GGTCTC	1 cut(s)	587
BsrI	ACTGG	2 cut(s)	112, 834
BssECI	CCNNGG	1 cut(s)	1354
BssMI	GATC	3 cut(s)	180, 1387, 1481
BssSI	CACGAG	1 cut(s)	242
BssT1I	CCWWGG	1 cut(s)	1354
Bst2BI	CACGAG	1 cut(s)	242
Bst4CI	ACNGT	3 cut(s)	961, 1165, 1429
Bst6I	CTCTTC	1 cut(s)	223
BstBAI	YACGTR	1 cut(s)	1507
BstBI	TTCGAA	1 cut(s)	195
BstC8I	GCNNGC	1 cut(s)	103
BstDEI	CTNAG	6 cut(s)	405, 736, 1127, 1140, 1277, 1414
BstDSI	CCRYGG	1 cut(s)	1354
BstF5I	GGATG	1 cut(s)	721
BstFNI	CGCG	1 cut(s)	981
BstKTI	GATC	3 cut(s)	183, 1390, 1484
BstMAI	GTCTC	3 cut(s)	587, 762, 1348
BstMBI	GATC	3 cut(s)	180, 1387, 1481
BstMWI	GCNNNNNNNGC	1 cut(s)	254
BstNSI	RCATGY	1 cut(s)	1260
BstUI	CGCG	1 cut(s)	981
BstV1I	GCAGC	3 cut(s)	99, 102, 747
BstV2I	GAAGAC	1 cut(s)	426
BstX2I	RGATCY	1 cut(s)	1387
BstYI	RGATCY	1 cut(s)	1387
Bsu36I	CCTNAGG	1 cut(s)	1277
BsuI	GTATCC	2 cut(s)	563, 826
BtgI	CCRYGG	1 cut(s)	1354
BtrI	CACGTC	1 cut(s)	1231
BtsCI	GGATG	1 cut(s)	721
BtsI	GCAGTG	2 cut(s)	666, 905
BtsIMutI	CAGTG	5 cut(s)	666, 827, 905, 949, 1312
Cac8I	GCNNGC	1 cut(s)	103
CaiI	CAGNNNCTG	1 cut(s)	1438
CciI	TCATGA	2 cut(s)	685, 1401
Cfr13I	GGNCC	1 cut(s)	856
Csp6I	GTAC	4 cut(s)	295, 1120, 1319, 1359
CviQI	GTAC	4 cut(s)	295, 1120, 1319, 1359
DdeI	CTNAG	6 cut(s)	405, 736, 1127, 1140, 1277, 1414
DpnI	GATC	3 cut(s)	182, 1389, 1483
DpnII	GATC	3 cut(s)	180, 1387, 1481
DraI	TTTAAA	1 cut(s)	1623
DrdI	GACNNNNNNGTC	1 cut(s)	1340
DseDI	GACNNNNNNGTC	1 cut(s)	1340
Eam1104I	CTCTTC	1 cut(s)	223
EarI	CTCTTC	1 cut(s)	223
Ecl136II	GAGCTC	1 cut(s)	750
Eco130I	CCWWGG	1 cut(s)	1354
Eco24I	GRGCYC	3 cut(s)	366, 752, 1377
Eco31I	GGTCTC	1 cut(s)	587
Eco47I	GGWCC	1 cut(s)	856
Eco53kI	GAGCTC	1 cut(s)	750
Eco57I	CTGAAG	2 cut(s)	364, 868
Eco81I	CCTNAGG	1 cut(s)	1277
Eco88I	CYCGRG	1 cut(s)	489
EcoICRI	GAGCTC	1 cut(s)	750
EcoO109I	RGGNCCY	1 cut(s)	856
EcoT14I	CCWWGG	1 cut(s)	1354
EcoT38I	GRGCYC	3 cut(s)	366, 752, 1377
ErhI	CCWWGG	1 cut(s)	1354
FalI	AAGNNNNNCTT	4 cut(s)	398, 430, 1023, 1055
FaqI	GGGAC	3 cut(s)	403, 842, 1241
FbaI	TGATCA	1 cut(s)	180
Fnu4HI	GCNGC	3 cut(s)	88, 91, 761
FokI	GGATG	1 cut(s)	728
FriOI	GRGCYC	3 cut(s)	366, 752, 1377
Fsp4HI	GCNGC	3 cut(s)	88, 91, 761
FspBI	CTAG	2 cut(s)	875, 1067
GluI	GCNGC	3 cut(s)	88, 91, 761
GsaI	CCCAGC	2 cut(s)	462, 1587
HapII	CCGG	1 cut(s)	258
HincII	GTYRAC	2 cut(s)	957, 1333
HindII	GTYRAC	2 cut(s)	957, 1333
HinfI	GANTC	2 cut(s)	888, 1144
HpaII	CCGG	1 cut(s)	258
HphI	GGTGA	3 cut(s)	325, 1143, 1526
Hpy166II	GTNNAC	6 cut(s)	721, 957, 1010, 1265, 1333, 1554
Hpy188I	TCNGA	8 cut(s)	45, 57, 160, 383, 739, 887, 1141, 1300
Hpy188III	TCNNGA	7 cut(s)	367, 686, 1159, 1190, 1262, 1402, 1469
Hpy8I	GTNNAC	6 cut(s)	721, 957, 1010, 1265, 1333, 1554
HpyAV	CCTTC	5 cut(s)	191, 541, 1217, 1241, 1586
HpyCH4III	ACNGT	3 cut(s)	961, 1165, 1429
HpyCH4IV	ACGT	7 cut(s)	423, 606, 1044, 1080, 1118, 1230, 1506
HpyCH4V	TGCA	5 cut(s)	101, 711, 1328, 1510, 1545
HpyF10VI	GCNNNNNNNGC	1 cut(s)	254
HpyF3I	CTNAG	6 cut(s)	405, 736, 1127, 1140, 1277, 1414
HpySE526I	ACGT	7 cut(s)	423, 606, 1044, 1080, 1118, 1230, 1506
KflI	GGGWCCC	1 cut(s)	856
Ksp22I	TGATCA	1 cut(s)	180
Kzo9I	GATC	3 cut(s)	180, 1387, 1481
LmnI	GCTCC	3 cut(s)	200, 550, 747
Lsp1109I	GCAGC	3 cut(s)	99, 102, 747
LweI	GCATC	2 cut(s)	672, 1183
MaeI	CTAG	2 cut(s)	875, 1067
MaeII	ACGT	7 cut(s)	423, 606, 1044, 1080, 1118, 1230, 1506
MaeIII	GTNAC	4 cut(s)	273, 924, 1049, 1114
MalI	GATC	3 cut(s)	182, 1389, 1483
MboI	GATC	3 cut(s)	180, 1387, 1481
MfeI	CAATTG	2 cut(s)	695, 861
MflI	RGATCY	1 cut(s)	1387
MhlI	GDGCHC	3 cut(s)	366, 752, 1377
MmeI	TCCRAC	2 cut(s)	411, 699
MseI	TTAA	4 cut(s)	269, 512, 996, 1622
MslI	CAYNNNNRTG	4 cut(s)	242, 848, 1191, 1493
MspI	CCGG	1 cut(s)	258
MunI	CAATTG	2 cut(s)	695, 861
Mva1269I	GAATGC	1 cut(s)	1547
MvnI	CGCG	1 cut(s)	981
MwoI	GCNNNNNNNGC	1 cut(s)	254
NcoI	CCATGG	1 cut(s)	1354
NdeII	GATC	3 cut(s)	180, 1387, 1481
NlaIV	GGNNCC	4 cut(s)	857, 858, 1181, 1389
NmeAIII	GCCGAG	1 cut(s)	1222
NmuCI	GTSAC	1 cut(s)	273
NspI	RCATGY	1 cut(s)	1260
NspV	TTCGAA	1 cut(s)	195
PaeR7I	CTCGAG	1 cut(s)	489
PagI	TCATGA	2 cut(s)	685, 1401
PciI	ACATGT	1 cut(s)	1256
PctI	GAATGC	1 cut(s)	1547
PfeI	GAWTC	2 cut(s)	888, 1144
PflFI	GACNNNGTC	1 cut(s)	7
PkrI	GCNGC	3 cut(s)	89, 92, 762
Ppu21I	YACGTR	1 cut(s)	1507
PpuMI	RGGWCCY	1 cut(s)	856
PscI	ACATGT	1 cut(s)	1256
PshBI	ATTAAT	1 cut(s)	996
Psp124BI	GAGCTC	1 cut(s)	752
Psp1406I	AACGTT	1 cut(s)	606
Psp5II	RGGWCCY	1 cut(s)	856
PspFI	CCCAGC	2 cut(s)	458, 1583
PspN4I	GGNNCC	4 cut(s)	857, 858, 1181, 1389
PspPI	GGNCC	1 cut(s)	856
PspPPI	RGGWCCY	1 cut(s)	856
PspXI	VCTCGAGB	1 cut(s)	489
PstNI	CAGNNNCTG	1 cut(s)	1438
PsuI	RGATCY	1 cut(s)	1387
PsyI	GACNNNGTC	1 cut(s)	7
RsaI	GTAC	4 cut(s)	296, 1121, 1320, 1360
RsaNI	GTAC	4 cut(s)	295, 1120, 1319, 1359
RseI	CAYNNNNRTG	4 cut(s)	242, 848, 1191, 1493
SacI	GAGCTC	1 cut(s)	752
SaqAI	TTAA	4 cut(s)	269, 512, 996, 1622
SatI	GCNGC	3 cut(s)	88, 91, 761
Sau3AI	GATC	3 cut(s)	180, 1387, 1481
Sau96I	GGNCC	1 cut(s)	856
SduI	GDGCHC	3 cut(s)	366, 752, 1377
SfaNI	GCATC	2 cut(s)	672, 1183
Sfr274I	CTCGAG	1 cut(s)	489
SfuI	TTCGAA	1 cut(s)	195
SinI	GGWCC	1 cut(s)	856
SlaI	CTCGAG	1 cut(s)	489
SmiMI	CAYNNNNRTG	4 cut(s)	242, 848, 1191, 1493
SmlI	CTYRAG	4 cut(s)	106, 365, 489, 1376
SmoI	CTYRAG	4 cut(s)	106, 365, 489, 1376
SsiI	CCGC	2 cut(s)	952, 1183
SspI	AATATT	1 cut(s)	1571
SspMI	CTAG	2 cut(s)	875, 1067
SstI	GAGCTC	1 cut(s)	752
StyI	CCWWGG	1 cut(s)	1354
TaaI	ACNGT	3 cut(s)	961, 1165, 1429
TaiI	ACGT	7 cut(s)	426, 609, 1047, 1083, 1121, 1233, 1509
TaqI	TCGA	4 cut(s)	195, 490, 752, 1629
TfiI	GAWTC	2 cut(s)	888, 1144
Tru1I	TTAA	4 cut(s)	269, 512, 996, 1622
Tru9I	TTAA	4 cut(s)	269, 512, 996, 1622
TscAI	CASTG	5 cut(s)	673, 834, 912, 949, 1312
TseFI	GTSAC	1 cut(s)	273
TseI	GCWGC	3 cut(s)	87, 90, 760
Tsp45I	GTSAC	1 cut(s)	273
TspDTI	ATGAA	8 cut(s)	226, 674, 1232, 1236, 1326, 1390, 1421, 1605
TspRI	CASTG	5 cut(s)	673, 834, 912, 949, 1312
Tth111I	GACNNNGTC	1 cut(s)	7
VpaK11BI	GGWCC	1 cut(s)	856
VspI	ATTAAT	1 cut(s)	996
XapI	RAATTY	2 cut(s)	680, 1625
XceI	RCATGY	1 cut(s)	1260
XhoI	CTCGAG	1 cut(s)	489
XspI	CTAG	2 cut(s)	875, 1067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.