Rorug03G0231400

glycerol-3-phosphate acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
21340422 .. 21353760
13339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0231400.1

Sequence Viewer

Length: 4179 bp
ATGGCGGTCTCCGAGGAGGAGTGTTCCTCCGCCAACTCCAGATCATCCTCCTCCTCCACCTCCAGCACCTCTCACTACCTCTCCAAGTGCCTCCTCCGTGGCACCGTCGTTCTCCACGTCCTCCACGGTCACATCCGCTTCCCCAACTCCCGCGACATCGTTTTCGGCAAGGAGAAATCGATAGAGTTGGTGATAATCGGTGAAGACGGGATTGTACAGTCTGTGTGTGAGCAGCCTGTGTTTGGCACCATTAAAGACATTGCCGTCCTACCTTGGAACGACGGATTCCGAACCCGAAACCGCCAGATGCTGGGCAAGGATCTTTTGGTGGTTGTTTCGGATTCCGGGAAGCTCTCGGTTCTCTCTTTCTGCAATGAAATGCACAGGTTTTTTCCTGTGACACAAGTTCAACTTTCTAATCCTGGAAACGCGAGGAATCAGCTTGCAAGAATGCTAGCCATTGATTCAAGTGGCTGCTTCATTGCTGCTAGTGCATATGTAGATCGGTTGGCTATGTTCTCTGTTTCAATGTCTGGAGGCAGTGACATTATTGATAAGAAAATAGTGTATCCCCCTGAAAACGAAGTCAATGTGAATGCTGCTAGAGTCCAGAAAAACAGTATATCAGGTACTATATGGAGCATGAGCTTTATTTCACAGGATCCTAATCAAAGTAAGGGACATAATCCTATACTCGCCGTTGTTATAAATAGGACTGGGGCAGTCCGCAATGAATTGCTGTTACTGGGATGGAACATTAGAGAACAAGATGTTTATGTTATTTCTCAGTATGTAGAAGATGATGGACCTTTAGTACTTAGCATTGCTGAAGTTCCTCATTCGTATGGATTTGCTTTTCTGTTTAGGGAGGGTGATGCTATTTTAATGGATCTTAGAGATGCCAACAACCCTTACTGTATCTACAGAACAAGCCCAAATTTCTTATCCAATGTGGTTGATGAGGCAAATTTTGTTCAGGAGTCGTCTAAAGGATGTGATCTGTCTAGCGAACTACAGGTTGATGACGAAGGGGGTTTATTTAATGTAGCTGCCTGTGCGTTACTGGAACTGAGTGATTTAGATCCTATGTGTATAGATGGTGACAAATACAATGTGAATGTGACTCACAAATTTGTGTGTTCATGGAGTTGGGAACCAGGGAATGTTAAAAACCAAAGAATGATCATTTCTGCTGATACCGGAGAATATTTCATGATTGAAATTTTTTTCAACCCTGATGGCGTTAAGGTTCAAGAATCTGAGTGTCTTTACAAAGGTTTACCATGCAAGACAATTTTGTGGGTTGAAGGCGGGTTTCTGGCTGCACTAGTAGATATGGGGGATGGGATGGTCTTGAAAATGGAAAACGGAACACTTCATTACAGAAGTCCTATTCAAACCATTGTCCCAGTCTTGGATATGTCAGTTGTGGATTACCATGATGAGAAACATGATCAAATGTTTGCTTGTTGTGGAGTGGCACCGGAGGGGTCATTAAGGATCATTAGAAGTGGTATCACTGTAGAAAAGCTACTAAGGACTGCGCCTATATATCAAGGGATTACTGGCACTTGGACATTACGAATGAAGGTGATTGATACTTACCATTCATTTCTTGTGCTATCATTTGTTGAGGAAACCAGGGTACTCTCAGTTGGTTTAAGCTTTACTGATGTGACTGATTCAGTTGGTTTCCAGCCTGATGTTTCTACTTTGGCATGTGGTGTTGTAAATGATGGAATGCTGGTCCAGATTCACAGAAGTGCAGTCAGGCTCTGTCTGCCCACCCAGGGTGCGCATTCTGATGGTGTTCCTTTGCCTTCTCCAGTTTGTACCTCTTGGTTCCCAGAAAATTTGAGCATCAGTTTGGGTGCTGTTGGGCATAATCTAATTGTTGTTTCTTCATCTAATCCCTGCTTTATATTCATACTTGGGGTCAGAATGCTTTCAGTGCATCATTATGAGATATATGAGATGCAACATTTGAGATTGCAAAATGAATTATCATGCATCTCCATTCCTCAGAACCGTTACGAGAAAAAAGATACAAGTTTTTCAAACAGTCTGGTAGATGAGAGTTCTGCCCCTGCTCTTCCATTTGGAGTTGACATCAGTAATATCTTTGTTATTGGAACACACAAGCCTTCGGTGGAAATCTTGTCTCTTGCACCTAGTGAAGGCCTACGAGTTCTTGCTTCTGGGGCAATTTCATTAACAAATACTTTTGGTACTGCTATTAGTGGCTGCATTCCTCAAGATGTAAGGCTTGTATTAGTTGACCGATTATATGTCCTTTCTGGATTGAGGAATGGAATGCTGCTTCGGTTTGAATGGCCTACTCCCTCTCGAAGGCCTTTATCTGTAGTACCTCAGAGTCCTGTTGATTGGCTTTCAGTTAGTACAGATACTGTTTTATCCAGTGTATCAGCAGCAAATTCTTTTGGTCGACATATGTATACTACTAAGTTATCTGAGAATATAAAGGACAACTTTCCTGTTGATTTGCAATTGATTGCTACCCGTCGGATTGGCATCACTCCTGTATTCCTGGTTCCTTTAAGTGATTCCCTTGATGGTGATGTAGTTGTTCTCAGTGATAGGCCTTGGTTGCTGCATACTGCAAGGCACAGCCTGTCATATACTTCTATCTCATTTCAATCTTCGACTCATGTGACTCCTGTATGTTATGTCGAATGCCCCAAGGGAATTTTATTTGTTGCAGAGAACTGTCTACATCTGGTAGAGATGGTGCACAGTAAGAGGCTTAATGTGCAGAAGTTGCATCTTGGAGGCACTCCGAGGAGGGTCTTTTATCATAGTGAAAGCAGGCTATTGCTTGTGATGAGGACTAATTTGAGTGATGATACATGTTCATCTGATATATGTTGCGTAGATCCTCTTAGTGGGTCGGTGCTGTCATCTTTCAAACTTGAATTTGGTGAAACTGGAAAATCGATGGAGTTAATGAGGGTTGGAAGCGAACAGGTTATTTTGGTTGGAACAAGTTTGTCTTCTGGGTCGGCCATAATGCCCTGTGGTGAGGCTGAAAGTACCAAGGGACGTCTTATTGTTCTCTGTCTTGAAAATATGCAAAATTCAGACAGTGGTTCAATGACATTCGGCTCAAAGGCAGGGTCATCTTCTCAACGAGCTTCCCCATTTCATGAAATTGTTGGGTATGCCACAGAACAGCTTTCAAGTAGTAGTCTCTGTAGTAGCCCAGATGATACTAGCTGTGATGGTATGAAACTTGAAGAAACTGACGCGTGGCAGTTTCGATTAGCTTTTTCAATGCCATGGCCTGGAATGGTACTTGCTATCTGCCCTTATCTTGATCGTTACTTCTTGGCTTCTGCTGGTAATGCTTTTTATTTATGTGGTTTTCCACATGACAATTCCCAAAGGGTAAAAAAGTGGGCTGTGGCGAGGACGCGCTTTACAATTACATCTTTGACCGCATATTTCACTAGAATTGTTGTTGGTGATTGTCGTGATGGCATCCTTTTCTATGATTATCACGAGGAGTCCAAAAGGCTGCAGCAACTTTACTGTGATCCGTATCAGAGATTAGTTGGTGATTGCATTCTTATGGATGTCAACACTGCTGTTGTTTCAGATCGTAAGGGAAGCATTGCTGTCCTTTCATGTGCAGATTATTTAGAAGATACTGCAAGTCCAGAATGTAATTTAACGGTGAGCTGTGCTTATTATATGGGTGAGGTAGCTATGAGCATCAAGAAGGGCTCATTTTCATATAAACTTCCAGCTGATGATGCATTGAAAGGCAGTGATGGAAGTATTGACTTCTCTCAAAACAGTATCATTGTGAGTACACTGCTTGGAAGCATAATAACTTTCGTTCCAATATCAAGGGAAGAATATGAACTCTTAGAAGCTGTCCAAGATAGACTGGCGGTACATCCATTAACCGCTCCTATTCTCGGAAATGATCATAATGAGTTTCGTAGCCGTGAAAATCCGGTTGGAGTACCCAAGATTCTTGATGCTGACATGCTTACTCAATTCTTGGAGCTTACAAGTATGCAACAAGAGGATGTATTATCATCACCTCTTTGCGTACAAGGCACAGTAAAGTCACGTTTGAAATTGCGAAGTTCGCCTGTTCCTGTCAATCAGGTTGTGCAACTCCTTGAGCGAGTTCACTATGCCCTAAACTAA

Protein Analysis

1392

Amino Acids

153.23

Weight (kDa)

5.31

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_RSE1_1st PF10433 37 - 467 5.3e-43 RSE1/DDB1/CPSF1 first beta-propeller
Beta-prop_RSE1_2nd PF23726 519 - 915 9.1e-30 RSE1/DDB1/CPSF1 second beta-propeller
CPSF_A PF03178 1091 - 1343 6.3e-30 CPSF A subunit region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 707
AasI GACNNNNNNGTC 1 cut(s) 263
AatII GACGTC 1 cut(s) 3064
Acc16I TGCGCA 1 cut(s) 1797
AccB1I GGYRCC 3 cut(s) 101, 245, 1480
AccB7I CCANNNNNTGG 2 cut(s) 310, 3302
AccBSI CCGCTC 1 cut(s) 3932
AccI GTMKAC 3 cut(s) 2446, 2456, 2731
AccII CGCG 4 cut(s) 153, 431, 3266, 3433
AclWI GGATC 8 cut(s) 327, 656, 669, 897, 1076, 1508, 2888, 3548
AcoI YGGCCR 1 cut(s) 3021
AcsI RAATTY 9 cut(s) 937, 967, 1130, 1221, 1852, 2434, 2706, 2933, 3094
AcuI CTGAAG 1 cut(s) 849
AcyI GRCGYC 1 cut(s) 3061
AdeI CACNNNGTG 1 cut(s) 2174
AfiI CCNNNNNNNGG 9 cut(s) 242, 310, 1414, 1790, 2177, 2349, 2903, 3302, 3941
AflIII ACRYGT 2 cut(s) 2867, 3264
AhlI ACTAGT 1 cut(s) 1327
AjiI CACGTC 1 cut(s) 118
AjnI CCWGG 6 cut(s) 421, 1156, 1640, 1788, 2547, 3301
AjuI GAANNNNNNNTTGG 2 cut(s) 3966, 3998
AleI CACNNNNGTG 1 cut(s) 1761
Alw21I GWGCWC 1 cut(s) 2754
Alw26I GTCTC 3 cut(s) 13, 2166, 3212
Alw44I GTGCAC 1 cut(s) 2750
AlwI GGATC 8 cut(s) 327, 656, 669, 897, 1076, 1508, 2888, 3548
AlwNI CAGNNNCTG 3 cut(s) 310, 1776, 2408
AoxI GGCC 6 cut(s) 2179, 2333, 2351, 2600, 3021, 3299
ApaLI GTGCAC 1 cut(s) 2750
ApoI RAATTY 9 cut(s) 937, 967, 1130, 1221, 1852, 2434, 2706, 2933, 3094
ArsI GACNNNNNNTTYG 4 cut(s) 146, 178, 3119, 3151
Asp700I GAANNNNTTC 1 cut(s) 1945
AspLEI GCGC 3 cut(s) 1546, 1798, 3435
AspS9I GGNCC 2 cut(s) 806, 1747
AsuC2I CCSGG 1 cut(s) 346
AsuNHI GCTAGC 1 cut(s) 454
AvaII GGWCC 2 cut(s) 806, 1747
BaeGI GKGCMC 1 cut(s) 2754
BamHI GGATCC 1 cut(s) 661
BanI GGYRCC 3 cut(s) 101, 245, 1480
BanII GRGCYC 1 cut(s) 3746
BauI CACGAG 1 cut(s) 3518
BbsI GAAGAC 2 cut(s) 210, 3003
Bbv12I GWGCWC 1 cut(s) 2754
BceAI ACGGC 3 cut(s) 248, 683, 3954
BciT130I CCWGG 6 cut(s) 423, 1158, 1642, 1790, 2549, 3303
BciVI GTATCC 1 cut(s) 579
BclI TGATCA 3 cut(s) 1182, 1453, 3949
BcnI CCSGG 1 cut(s) 346
BcoDI GTCTC 3 cut(s) 13, 2166, 3212
BcuI ACTAGT 1 cut(s) 1327
BfaI CTAG 8 cut(s) 455, 489, 603, 1005, 1328, 2172, 3231, 3468
BfmI CTRYAG 6 cut(s) 922, 1013, 1521, 2361, 3211, 3536
BfuI GTATCC 1 cut(s) 579
BmcAI AGTACT 1 cut(s) 816
Bme1390I CCNGG 7 cut(s) 346, 423, 1158, 1642, 1790, 2549, 3303
Bme18I GGWCC 2 cut(s) 806, 1747
BmgBI CACGTC 1 cut(s) 118
BmgT120I GGNCC 2 cut(s) 806, 1747
BmiI GGNNCC 7 cut(s) 103, 247, 663, 1155, 1482, 1844, 2553
BmrFI CCNGG 7 cut(s) 346, 423, 1158, 1642, 1790, 2549, 3303
BmrI ACTGGG 3 cut(s) 726, 755, 1403
BmtI GCTAGC 1 cut(s) 458
BmuI ACTGGG 3 cut(s) 726, 755, 1403
BpiI GAAGAC 2 cut(s) 210, 3003
BplI GAGNNNNNCTC 2 cut(s) 11, 43
BpmI CTGGAG 4 cut(s) 22, 46, 555, 1809
BpuEI CTTGAG 2 cut(s) 2238, 4172
BpuMI CCSGG 1 cut(s) 346
Bsa29I ATCGAT 2 cut(s) 179, 2954
BsaBI GATNNNNATC 4 cut(s) 666, 1080, 2531, 3558
BsaHI GRCGYC 1 cut(s) 3061
BsaI GGTCTC 1 cut(s) 13
BsaWI WCCGGW 3 cut(s) 1199, 1483, 3979
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 9 cut(s) 242, 310, 1414, 1790, 2177, 2349, 2903, 3302, 3941
Bse1I ACTGG 9 cut(s) 721, 750, 1068, 1409, 1570, 1826, 2418, 2950, 3915
Bse3DI GCAATG 6 cut(s) 258, 379, 480, 736, 822, 3630
Bse8I GATNNNNATC 4 cut(s) 666, 1080, 2531, 3558
BseBI CCWGG 6 cut(s) 423, 1158, 1642, 1790, 2549, 3303
BseCI ATCGAT 2 cut(s) 179, 2954
BseJI GATNNNNATC 4 cut(s) 666, 1080, 2531, 3558
BseLI CCNNNNNNNGG 9 cut(s) 242, 310, 1414, 1790, 2177, 2349, 2903, 3302, 3941
BseMI GCAATG 6 cut(s) 258, 379, 480, 736, 822, 3630
BseMII CTCAG 8 cut(s) 800, 1061, 1251, 1665, 2036, 2384, 2463, 2605
BseNI ACTGG 9 cut(s) 721, 750, 1068, 1409, 1570, 1826, 2418, 2950, 3915
BseRI GAGGAG 7 cut(s) 29, 32, 40, 43, 83, 2815, 3536
BseSI GKGCMC 1 cut(s) 2754
BseYI CCCAGC 1 cut(s) 310
BsgI GTGCAG 4 cut(s) 1308, 1785, 2792, 3669
Bsh1236I CGCG 4 cut(s) 153, 431, 3266, 3433
BshFI GGCC 6 cut(s) 2181, 2335, 2353, 2602, 3023, 3301
BshNI GGYRCC 3 cut(s) 101, 245, 1480
BshVI ATCGAT 2 cut(s) 179, 2954
BsiHKAI GWGCWC 1 cut(s) 2754
BsiSI CCGG 4 cut(s) 345, 1200, 1484, 3980
BslFI GGGAC 3 cut(s) 693, 1391, 3072
BslI CCNNNNNNNGG 9 cut(s) 242, 310, 1414, 1790, 2177, 2349, 2903, 3302, 3941
BsmAI GTCTC 3 cut(s) 13, 2166, 3212
BsmFI GGGAC 3 cut(s) 693, 1391, 3072
BsmI GAATGC 9 cut(s) 456, 601, 1746, 1798, 1947, 2247, 2319, 2699, 3582
BsnI GGCC 6 cut(s) 2181, 2335, 2353, 2602, 3023, 3301
Bso31I GGTCTC 1 cut(s) 13
Bsp1286I GDGCHC 2 cut(s) 2754, 3746
Bsp1407I TGTACA 1 cut(s) 214
Bsp19I CCATGG 1 cut(s) 3296
BspANI GGCC 6 cut(s) 2181, 2335, 2353, 2602, 3023, 3301
BspCNI CTCAG 8 cut(s) 799, 1062, 1252, 1664, 2035, 2383, 2464, 2604
BspDI ATCGAT 2 cut(s) 179, 2954
BspFNI CGCG 4 cut(s) 153, 431, 3266, 3433
BspHI TCATGA 2 cut(s) 1212, 3163
BspLI GGNNCC 7 cut(s) 103, 247, 663, 1155, 1482, 1844, 2553
BspMAI CTGCAG 1 cut(s) 3540
BspOI GCTAGC 1 cut(s) 458
BspPI GGATC 8 cut(s) 327, 656, 669, 897, 1076, 1508, 2888, 3548
BspQI GCTCTTC 1 cut(s) 2097
BspT107I GGYRCC 3 cut(s) 101, 245, 1480
BspTNI GGTCTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 3932
BsrDI GCAATG 6 cut(s) 258, 379, 480, 736, 822, 3630
BsrGI TGTACA 1 cut(s) 214
BsrI ACTGG 9 cut(s) 721, 750, 1068, 1409, 1570, 1826, 2418, 2950, 3915
BssNAI GTATAC 1 cut(s) 2457
BssNI GRCGYC 1 cut(s) 3061
BssSI CACGAG 1 cut(s) 3518
BssT1I CCWWGG 5 cut(s) 272, 2603, 2700, 3054, 3296
Bst1107I GTATAC 1 cut(s) 2457
Bst2BI CACGAG 1 cut(s) 3518
Bst2UI CCWGG 6 cut(s) 423, 1158, 1642, 1790, 2549, 3303
Bst6I CTCTTC 1 cut(s) 2097
BstACI GRCGYC 1 cut(s) 3061
BstAPI GCANNNNNTGC 1 cut(s) 2779
BstAUI TGTACA 1 cut(s) 214
BstC8I GCNNGC 3 cut(s) 444, 456, 2828
BstDSI CCRYGG 3 cut(s) 97, 124, 3296
BstENI CCTNNNNNAGG 2 cut(s) 2175, 2347
BstFNI CGCG 4 cut(s) 153, 431, 3266, 3433
BstHHI GCGC 3 cut(s) 1546, 1798, 3435
BstMAI GTCTC 3 cut(s) 13, 2166, 3212
BstNI CCWGG 6 cut(s) 423, 1158, 1642, 1790, 2549, 3303
BstNSI RCATGY 3 cut(s) 1722, 2871, 4015
BstSCI CCNGG 7 cut(s) 344, 421, 1156, 1640, 1788, 2547, 3301
BstSFI CTRYAG 6 cut(s) 922, 1013, 1521, 2361, 3211, 3536
BstSLI GKGCMC 1 cut(s) 2754
BstUI CGCG 4 cut(s) 153, 431, 3266, 3433
BstV2I GAAGAC 2 cut(s) 210, 3003
BstX2I RGATCY 5 cut(s) 319, 661, 889, 1081, 2893
BstYI RGATCY 5 cut(s) 319, 661, 889, 1081, 2893
BstZ17I GTATAC 1 cut(s) 2457
Bsu15I ATCGAT 2 cut(s) 179, 2954
BsuI GTATCC 1 cut(s) 579
BsuRI GGCC 6 cut(s) 2181, 2335, 2353, 2602, 3023, 3301
BsuTUI ATCGAT 2 cut(s) 179, 2954
BtgI CCRYGG 3 cut(s) 97, 124, 3296
BtrI CACGTC 1 cut(s) 118
BtsI GCAGTG 4 cut(s) 547, 3600, 3793, 3833
BtsIMutI CAGTG 9 cut(s) 547, 1518, 1956, 2425, 2599, 3109, 3600, 3793, 3833
Cac8I GCNNGC 3 cut(s) 444, 456, 2828
CaiI CAGNNNCTG 3 cut(s) 310, 1776, 2408
CciI TCATGA 2 cut(s) 1212, 3163
CfoI GCGC 3 cut(s) 1546, 1798, 3435
Cfr13I GGNCC 2 cut(s) 806, 1747
ClaI ATCGAT 2 cut(s) 179, 2954
CseI GACGC 2 cut(s) 3272, 3439
DraIII CACNNNGTG 1 cut(s) 2174
DrdI GACNNNNNNGTC 1 cut(s) 263
DseDI GACNNNNNNGTC 1 cut(s) 263
EaeI YGGCCR 1 cut(s) 3021
Eam1104I CTCTTC 1 cut(s) 2097
EarI CTCTTC 1 cut(s) 2097
EciI GGCGGA 1 cut(s) 19
Eco130I CCWWGG 5 cut(s) 272, 2603, 2700, 3054, 3296
Eco147I AGGCCT 3 cut(s) 2181, 2353, 2602
Eco24I GRGCYC 1 cut(s) 3746
Eco31I GGTCTC 1 cut(s) 13
Eco47I GGWCC 2 cut(s) 806, 1747
Eco57I CTGAAG 1 cut(s) 849
EcoNI CCTNNNNNAGG 2 cut(s) 2175, 2347
EcoRII CCWGG 6 cut(s) 421, 1156, 1640, 1788, 2547, 3301
EcoT14I CCWWGG 5 cut(s) 272, 2603, 2700, 3054, 3296
EcoT22I ATGCAT 2 cut(s) 2012, 3778
EcoT38I GRGCYC 1 cut(s) 3746
ErhI CCWWGG 5 cut(s) 272, 2603, 2700, 3054, 3296
FalI AAGNNNNNCTT 6 cut(s) 396, 428, 2474, 2506, 2995, 3027
FaqI GGGAC 3 cut(s) 693, 1391, 3072
FauI CCCGC 2 cut(s) 158, 1304
FauNDI CATATG 2 cut(s) 496, 2451
FbaI TGATCA 3 cut(s) 1182, 1453, 3949
FblI GTMKAC 3 cut(s) 2446, 2456, 2731
FriOI GRGCYC 1 cut(s) 3746
FspAI RTGCGCAY 1 cut(s) 1797
FspBI CTAG 8 cut(s) 455, 489, 603, 1005, 1328, 2172, 3231, 3468
FspI TGCGCA 1 cut(s) 1797
GlaI GCGC 3 cut(s) 1545, 1797, 3434
GsaI CCCAGC 1 cut(s) 314
GsuI CTGGAG 4 cut(s) 22, 46, 555, 1809
HaeIII GGCC 6 cut(s) 2181, 2335, 2353, 2602, 3023, 3301
HapII CCGG 4 cut(s) 345, 1200, 1484, 3980
HgaI GACGC 2 cut(s) 3272, 3439
HhaI GCGC 3 cut(s) 1546, 1798, 3435
Hin1I GRCGYC 1 cut(s) 3061
Hin6I GCGC 3 cut(s) 1544, 1796, 3433
HinP1I GCGC 3 cut(s) 1544, 1796, 3433
HincII GTYRAC 4 cut(s) 2107, 2278, 2447, 3598
HindII GTYRAC 4 cut(s) 2107, 2278, 2447, 3598
HindIII AAGCTT 1 cut(s) 1663
HpaII CCGG 4 cut(s) 345, 1200, 1484, 3980
Hpy99I CGWCG 3 cut(s) 110, 284, 2526
HpyAV CCTTC 8 cut(s) 1022, 1301, 1582, 1830, 2154, 2171, 2343, 3733
HpyCH4IV ACGT 3 cut(s) 117, 3061, 4099
HpySE526I ACGT 3 cut(s) 117, 3061, 4099
Hsp92I GRCGYC 1 cut(s) 3061
HspAI GCGC 3 cut(s) 1544, 1796, 3433
Ksp22I TGATCA 3 cut(s) 1182, 1453, 3949
LguI GCTCTTC 1 cut(s) 2097
LmnI GCTCC 3 cut(s) 639, 3937, 4030
MaeI CTAG 8 cut(s) 455, 489, 603, 1005, 1328, 2172, 3231, 3468
MaeII ACGT 3 cut(s) 117, 3061, 4099
MbiI CCGCTC 1 cut(s) 3932
MfeI CAATTG 1 cut(s) 2507
MflI RGATCY 5 cut(s) 319, 661, 889, 1081, 2893
MhlI GDGCHC 2 cut(s) 2754, 3746
MluI ACGCGT 1 cut(s) 3264
MlyI GAGTC 7 cut(s) 615, 989, 1117, 2383, 2659, 2668, 3533
MmeI TCCRAC 4 cut(s) 2504, 2953, 2977, 3964
Mph1103I ATGCAT 2 cut(s) 2012, 3778
MroXI GAANNNNTTC 1 cut(s) 1945
MslI CAYNNNNRTG 5 cut(s) 843, 1761, 1803, 1959, 3587
MspA1I CMGCKG 1 cut(s) 3767
MspI CCGG 4 cut(s) 345, 1200, 1484, 3980
MspR9I CCNGG 7 cut(s) 346, 423, 1158, 1642, 1790, 2549, 3303
MunI CAATTG 1 cut(s) 2507
Mva1269I GAATGC 9 cut(s) 456, 601, 1746, 1798, 1947, 2247, 2319, 2699, 3582
MvaI CCWGG 6 cut(s) 423, 1158, 1642, 1790, 2549, 3303
MvnI CGCG 4 cut(s) 153, 431, 3266, 3433
NciI CCSGG 1 cut(s) 346
NcoI CCATGG 1 cut(s) 3296
NdeI CATATG 2 cut(s) 496, 2451
NheI GCTAGC 1 cut(s) 454
NlaIV GGNNCC 7 cut(s) 103, 247, 663, 1155, 1482, 1844, 2553
NmuCI GTSAC 8 cut(s) 128, 397, 542, 1100, 1120, 1675, 2671, 4095
NsbI TGCGCA 1 cut(s) 1797
NsiI ATGCAT 2 cut(s) 2012, 3778
NspI RCATGY 3 cut(s) 1722, 2871, 4015
OliI CACNNNNGTG 1 cut(s) 1761
PagI TCATGA 2 cut(s) 1212, 3163
PasI CCCWGGG 1 cut(s) 1789
PceI AGGCCT 3 cut(s) 2181, 2353, 2602
PciI ACATGT 1 cut(s) 2867
PciSI GCTCTTC 1 cut(s) 2097
PcsI WCGNNNNNNNCGW 1 cut(s) 114
PctI GAATGC 9 cut(s) 456, 601, 1746, 1798, 1947, 2247, 2319, 2699, 3582
PdmI GAANNNNTTC 1 cut(s) 1945
PfeI GAWTC 9 cut(s) 285, 341, 436, 464, 1256, 1682, 1753, 2564, 3997
PflMI CCANNNNNTGG 2 cut(s) 310, 3302
PfoI TCCNGGA 2 cut(s) 344, 421
PleI GAGTC 7 cut(s) 614, 988, 1117, 2382, 2659, 2668, 3532
PpsI GAGTC 7 cut(s) 614, 988, 1117, 2382, 2659, 2668, 3532
PscI ACATGT 1 cut(s) 2867
PsiI TTATAA 1 cut(s) 707
Psp6I CCWGG 6 cut(s) 421, 1156, 1640, 1788, 2547, 3301
PspFI CCCAGC 1 cut(s) 310
PspGI CCWGG 6 cut(s) 421, 1156, 1640, 1788, 2547, 3301
PspN4I GGNNCC 7 cut(s) 103, 247, 663, 1155, 1482, 1844, 2553
PspPI GGNCC 2 cut(s) 806, 1747
PsrI GAACNNNNNNTAC 2 cut(s) 2535, 2567
PstI CTGCAG 1 cut(s) 3540
PstNI CAGNNNCTG 3 cut(s) 310, 1776, 2408
PsuI RGATCY 5 cut(s) 319, 661, 889, 1081, 2893
PvuII CAGCTG 1 cut(s) 3767
RseI CAYNNNNRTG 5 cut(s) 843, 1761, 1803, 1959, 3587
SalI GTCGAC 1 cut(s) 2445
SapI GCTCTTC 1 cut(s) 2097
Sau96I GGNCC 2 cut(s) 806, 1747
ScaI AGTACT 1 cut(s) 816
SchI GAGTC 7 cut(s) 615, 989, 1117, 2383, 2659, 2668, 3533
ScrFI CCNGG 7 cut(s) 346, 423, 1158, 1642, 1790, 2549, 3303
SduI GDGCHC 2 cut(s) 2754, 3746
SfcI CTRYAG 6 cut(s) 922, 1013, 1521, 2361, 3211, 3536
SinI GGWCC 2 cut(s) 806, 1747
SmiMI CAYNNNNRTG 5 cut(s) 843, 1761, 1803, 1959, 3587
SmlI CTYRAG 2 cut(s) 2253, 4151
SmoI CTYRAG 2 cut(s) 2253, 4151
SpeI ACTAGT 1 cut(s) 1327
SseBI AGGCCT 3 cut(s) 2181, 2353, 2602
SspI AATATT 1 cut(s) 1208
SspMI CTAG 8 cut(s) 455, 489, 603, 1005, 1328, 2172, 3231, 3468
StuI AGGCCT 3 cut(s) 2181, 2353, 2602
StyD4I CCNGG 7 cut(s) 344, 421, 1156, 1640, 1788, 2547, 3301
StyI CCWWGG 5 cut(s) 272, 2603, 2700, 3054, 3296
TaiI ACGT 3 cut(s) 120, 3064, 4102
TaqI TCGA 7 cut(s) 179, 2347, 2446, 2663, 2691, 2954, 3277
TaqII GACCGA 1 cut(s) 2295
TatI WGTACW 4 cut(s) 214, 814, 2399, 3830
TfiI GAWTC 9 cut(s) 285, 341, 436, 464, 1256, 1682, 1753, 2564, 3997
TscAI CASTG 9 cut(s) 547, 1525, 1956, 2425, 2599, 3109, 3607, 3793, 3840
TseFI GTSAC 8 cut(s) 128, 397, 542, 1100, 1120, 1675, 2671, 4095
Tsp45I GTSAC 8 cut(s) 128, 397, 542, 1100, 1120, 1675, 2671, 4095
TspGWI ACGGA 4 cut(s) 86, 297, 1383, 3546
TspRI CASTG 9 cut(s) 547, 1525, 1956, 2425, 2599, 3109, 3607, 3793, 3840
Van91I CCANNNNNTGG 2 cut(s) 310, 3302
VneI GTGCAC 1 cut(s) 2750
VpaK11BI GGWCC 2 cut(s) 806, 1747
XagI CCTNNNNNAGG 2 cut(s) 2175, 2347
XapI RAATTY 9 cut(s) 937, 967, 1130, 1221, 1852, 2434, 2706, 2933, 3094
XceI RCATGY 3 cut(s) 1722, 2871, 4015
XmiI GTMKAC 3 cut(s) 2446, 2456, 2731
XmnI GAANNNNTTC 1 cut(s) 1945
XspI CTAG 8 cut(s) 455, 489, 603, 1005, 1328, 2172, 3231, 3468
ZraI GACGTC 1 cut(s) 3062
ZrmI AGTACT 1 cut(s) 816
Zsp2I ATGCAT 2 cut(s) 2012, 3778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.