pycom17g27610

glycerol-3-phosphate acyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
25745320 .. 25747899
2580 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g27610.2

Sequence Viewer

Length: 1611 bp
ATGCCCATGGCCTTTTTCTTGATGCCATTATTTCGCATTTTCTTTCAGAAACTCAGAGGTCTCCCCAGAAGTGTAAGCAGCAACAACCATGCAACCGGCATATCACCAAGCCAGTCTAAAAATCACAACTCGTTCGGTTCTCTTTACTCTCAAAGATCGAACCTCACGAACCAAACTTGGATCGTCTTTGACGTTGAAGGAGCTCTACTGAAATCCTCTTGTTTGTTTAATTACTTCATGCTCGTGGCTTTTGAAGCTGGAAATTTCTTAAGGGCACTTGTTCTTTTCCTTTTATGCCCTATCATATTTTTCGTCAGTGACGAATTAGGGTTGAAAATAATGGTGATGGTCTGCTTCTTTGGGGTTAAGAAAGACAGCTTTAGAATTGGCACGGCTGTTTTGCCTAAGTTCTTCTTGGAAGATGTTGGGTTGGAAGCCTTTGAGGTGCTTCAAAGAGGTGGGAATAAAGTTGGTGTTAGTAAGCTACCGCAAGTAATGATCGAGAGCTTCTTAAAAGACTACTTGGAGATTGATATGGTGATCGGGAAGGAGCTAAAGGCGTTTGGCGGATACTTTTTGGGTATCATGGAGGAAGAGGAGAGCCATATTGTTTCGCCGCTTTGGGAAGAACAAGAACATGGTGGAGATGATAACATGGGCTTTGATACAATTGGTATCTCTACCTCCAACAAATTTAATGATCACCAACAATTCTCTTACTGCAAGGAAGTTTATCTAGTGGGAGATTCAGATAAGAGGAGCTGGAAGAACCTACCAAGAGACAGATACCCTAAGAAGCTCGTTTTCCATGATGGTCGATTGGCTCTCACACCAACCCCACTTGAAACCCTAGCAATATTGATGTGGTTACCACTAGGAATTGCCCTAGCAATCTTCAGAATCATCGTGGGGAAATCACTGCCTTACGACGTGTCGTTCCCTCTACTGTGTTTCAGTGGTCTACGACTGACTCTGGGAGGTCCAAAAGCCCAGAGTGAAACCCTTCCAAAGGACAAGCCTAGAGGTACGCTTTACGTTTGTAACCATAGAACCCTGCTAGACCCTCTCTACATTTGCGTCGCACTGAAGAAAAATCTACACGCTGTAACGTACAGCCTAAGCAAGATGTCTGAGATCCTCTCACCAATCAAGACCGTCCGATTAACAAGAAATCGCCATCGAGACGGAAAGATGATGGAGAAGTTGTTGAATCAAGGGGACGTCGTTGTTTGCCCCGAAGGAACGACATGTCGTGAACCCTACCTCCTTAGGTTTAGTCCCTTGTTTACAGAAATTAGTGACGAAATAATTCCTGTTGCAATCAACACCCACGTTGGCATGTTCCATGGCACAACTGCTGGCGGGCTCAAGTGTTTGGACCCACTTTTCTACCTGATGAACCCCTCACCGATCGACACCGTTCAGTTGCTGGAGAAGGTATCCGGGCTGTCCACTTGTCGTGATGGGAATCGATCAAGCTTTGATGTGGCTAATTACGTGCAAGGTGAGATTGGCAAGGCATTAGGGTTTGAATGCACCAAGCTTACAAGGAGAGATAAATACTTAATTTTGGCCGGGAACGAAGGTATTGCTTCCAAATGTACAATTTAA

Protein Analysis

537

Amino Acids

60.12

Weight (kDa)

8.43

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1224
AccI GTMKAC 1 cut(s) 961
AciI CCGC 4 cut(s) 488, 567, 617, 1362
AclWI GGATC 2 cut(s) 188, 1129
AcoI YGGCCR 1 cut(s) 1572
AcsI RAATTY 2 cut(s) 262, 692
AcuI CTGAAG 2 cut(s) 880, 1106
AcyI GRCGYC 1 cut(s) 1221
AfaI GTAC 3 cut(s) 1027, 1112, 1603
AfiI CCNNNNNNNGG 1 cut(s) 1009
AflII CTTAAG 1 cut(s) 268
AflIII ACRYGT 2 cut(s) 930, 1247
AgsI TTSAA 7 cut(s) 197, 254, 334, 452, 845, 1210, 1532
AjiI CACGTC 1 cut(s) 931
AloI GAACNNNNNNTCC 2 cut(s) 1248, 1280
Alw21I GWGCWC 1 cut(s) 205
Alw26I GTCTC 3 cut(s) 65, 774, 1176
AlwI GGATC 2 cut(s) 188, 1129
AlwNI CAGNNNCTG 1 cut(s) 1429
AoxI GGCC 2 cut(s) 9, 1572
ApeKI GCWGC 1 cut(s) 78
ApoI RAATTY 2 cut(s) 262, 692
Asp700I GAANNNNTTC 2 cut(s) 1002, 1308
AspS9I GGNCC 2 cut(s) 980, 1378
AsuC2I CCSGG 2 cut(s) 1444, 1576
AsuHPI GGTGA 7 cut(s) 96, 355, 550, 695, 1134, 1398, 1517
AvaII GGWCC 2 cut(s) 980, 1378
AxyI CCTNAGG 1 cut(s) 1268
BaeGI GKGCMC 1 cut(s) 277
BanII GRGCYC 2 cut(s) 205, 1368
BarI GAAGNNNNNNTAC 2 cut(s) 189, 221
BauI CACGAG 1 cut(s) 242
Bbv12I GWGCWC 1 cut(s) 205
BbvI GCAGC 1 cut(s) 90
BccI CCATC 5 cut(s) 340, 806, 1185, 1189, 1457
BceAI ACGGC 1 cut(s) 408
BcgI CGANNNNNNTGC 2 cut(s) 1571, 1605
BciVI GTATCC 2 cut(s) 563, 1450
BclI TGATCA 1 cut(s) 700
BcnI CCSGG 2 cut(s) 1444, 1576
BcoDI GTCTC 3 cut(s) 65, 774, 1176
BfaI CTAG 6 cut(s) 737, 851, 875, 887, 1020, 1058
BfrI CTTAAG 1 cut(s) 268
BfuI GTATCC 2 cut(s) 563, 1450
BisI GCNGC 2 cut(s) 79, 617
BlsI GCNGC 2 cut(s) 80, 618
Bme1390I CCNGG 2 cut(s) 1444, 1576
Bme18I GGWCC 2 cut(s) 980, 1378
BmgBI CACGTC 1 cut(s) 931
BmgT120I GGNCC 2 cut(s) 980, 1378
BmiI GGNNCC 1 cut(s) 1380
BmrFI CCNGG 2 cut(s) 1444, 1576
BmsI GCATC 1 cut(s) 12
BplI GAGNNNNNCTC 2 cut(s) 1124, 1156
BpmI CTGGAG 1 cut(s) 1451
Bpu10I CCTNAGC 1 cut(s) 1118
BpuEI CTTGAG 1 cut(s) 1352
BpuMI CCSGG 2 cut(s) 1444, 1576
Bsa29I ATCGAT 1 cut(s) 1471
BsaAI YACGTR 1 cut(s) 1498
BsaBI GATNNNNATC 1 cut(s) 1467
BsaHI GRCGYC 1 cut(s) 1221
BsaI GGTCTC 1 cut(s) 65
BsaJI CCNNGG 2 cut(s) 6, 1345
BsaXI ACNNNNNCTCC 4 cut(s) 1190, 1220, 1248, 1278
Bsc4I CCNNNNNNNGG 1 cut(s) 1009
Bse118I RCCGGY 1 cut(s) 95
Bse1I ACTGG 1 cut(s) 112
Bse21I CCTNAGG 1 cut(s) 1268
Bse8I GATNNNNATC 1 cut(s) 1467
BseCI ATCGAT 1 cut(s) 1471
BseDI CCNNGG 2 cut(s) 6, 1345
BseJI GATNNNNATC 1 cut(s) 1467
BseLI CCNNNNNNNGG 1 cut(s) 1009
BseMII CTCAG 2 cut(s) 67, 1122
BseNI ACTGG 1 cut(s) 112
BseRI GAGGAG 2 cut(s) 611, 772
BseSI GKGCMC 1 cut(s) 277
BseXI GCAGC 1 cut(s) 90
Bsh1285I CGRYCG 1 cut(s) 1413
BshFI GGCC 2 cut(s) 11, 1574
BshVI ATCGAT 1 cut(s) 1471
BsiEI CGRYCG 1 cut(s) 1413
BsiHKAI GWGCWC 1 cut(s) 205
BsiSI CCGG 3 cut(s) 96, 1443, 1575
BslFI GGGAC 2 cut(s) 1232, 1263
BslI CCNNNNNNNGG 1 cut(s) 1009
BsmAI GTCTC 3 cut(s) 65, 774, 1176
BsmBI CGTCTC 1 cut(s) 1176
BsmFI GGGAC 2 cut(s) 1232, 1263
BsmI GAATGC 1 cut(s) 1538
BsnI GGCC 2 cut(s) 11, 1574
Bso31I GGTCTC 1 cut(s) 65
Bsp1286I GDGCHC 3 cut(s) 205, 277, 1368
Bsp1407I TGTACA 1 cut(s) 1601
Bsp143I GATC 8 cut(s) 155, 180, 498, 540, 700, 1134, 1410, 1472
Bsp19I CCATGG 2 cut(s) 6, 1345
BspACI CCGC 4 cut(s) 488, 567, 617, 1362
BspANI GGCC 2 cut(s) 11, 1574
BspCNI CTCAG 2 cut(s) 66, 1123
BspDI ATCGAT 1 cut(s) 1471
BspLI GGNNCC 1 cut(s) 1380
BspPI GGATC 2 cut(s) 188, 1129
BspTI CTTAAG 1 cut(s) 268
BspTNI GGTCTC 1 cut(s) 65
BsrFI RCCGGY 1 cut(s) 95
BsrGI TGTACA 1 cut(s) 1601
BsrI ACTGG 1 cut(s) 112
BssAI RCCGGY 1 cut(s) 95
BssECI CCNNGG 2 cut(s) 6, 1345
BssMI GATC 8 cut(s) 155, 180, 498, 540, 700, 1134, 1410, 1472
BssNI GRCGYC 1 cut(s) 1221
BssSI CACGAG 1 cut(s) 242
BssT1I CCWWGG 2 cut(s) 6, 1345
Bst2BI CACGAG 1 cut(s) 242
Bst4CI ACNGT 3 cut(s) 948, 1156, 1420
Bst6I CTCTTC 1 cut(s) 588
BstACI GRCGYC 1 cut(s) 1221
BstAFI CTTAAG 1 cut(s) 268
BstAUI TGTACA 1 cut(s) 1601
BstBAI YACGTR 1 cut(s) 1498
BstC8I GCNNGC 2 cut(s) 1360, 1364
BstDEI CTNAG 6 cut(s) 53, 405, 792, 1118, 1131, 1268
BstDSI CCRYGG 2 cut(s) 6, 1345
BstEII GGTNACC 1 cut(s) 867
BstENI CCTNNNNNAGG 1 cut(s) 1007
BstKTI GATC 8 cut(s) 158, 183, 501, 543, 703, 1137, 1413, 1475
BstMAI GTCTC 3 cut(s) 65, 774, 1176
BstMBI GATC 8 cut(s) 155, 180, 498, 540, 700, 1134, 1410, 1472
BstMCI CGRYCG 1 cut(s) 1413
BstMWI GCNNNNNNNGC 1 cut(s) 254
BstNSI RCATGY 2 cut(s) 1251, 1342
BstPI GGTNACC 1 cut(s) 867
BstSCI CCNGG 2 cut(s) 1442, 1574
BstSLI GKGCMC 1 cut(s) 277
BstV1I GCAGC 1 cut(s) 90
BstX2I RGATCY 1 cut(s) 1134
BstYI RGATCY 1 cut(s) 1134
Bsu15I ATCGAT 1 cut(s) 1471
Bsu36I CCTNAGG 1 cut(s) 1268
BsuI GTATCC 2 cut(s) 563, 1450
BsuRI GGCC 2 cut(s) 11, 1574
BsuTUI ATCGAT 1 cut(s) 1471
BtgI CCRYGG 2 cut(s) 6, 1345
BtrI CACGTC 1 cut(s) 931
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 4 cut(s) 322, 917, 961, 1082
Cac8I GCNNGC 2 cut(s) 1360, 1364
CaiI CAGNNNCTG 1 cut(s) 1429
Cfr10I RCCGGY 1 cut(s) 95
Cfr13I GGNCC 2 cut(s) 980, 1378
ClaI ATCGAT 1 cut(s) 1471
CseI GACGC 1 cut(s) 1066
Csp6I GTAC 3 cut(s) 1026, 1111, 1602
CviQI GTAC 3 cut(s) 1026, 1111, 1602
DdeI CTNAG 6 cut(s) 53, 405, 792, 1118, 1131, 1268
DpnI GATC 8 cut(s) 157, 182, 500, 542, 702, 1136, 1412, 1474
DpnII GATC 8 cut(s) 155, 180, 498, 540, 700, 1134, 1410, 1472
EaeI YGGCCR 1 cut(s) 1572
Eam1104I CTCTTC 1 cut(s) 588
EarI CTCTTC 1 cut(s) 588
EciI GGCGGA 1 cut(s) 582
Ecl136II GAGCTC 1 cut(s) 203
Eco130I CCWWGG 2 cut(s) 6, 1345
Eco24I GRGCYC 2 cut(s) 205, 1368
Eco31I GGTCTC 1 cut(s) 65
Eco47I GGWCC 2 cut(s) 980, 1378
Eco53kI GAGCTC 1 cut(s) 203
Eco57I CTGAAG 2 cut(s) 880, 1106
Eco81I CCTNAGG 1 cut(s) 1268
Eco91I GGTNACC 1 cut(s) 867
EcoICRI GAGCTC 1 cut(s) 203
EcoNI CCTNNNNNAGG 1 cut(s) 1007
EcoO65I GGTNACC 1 cut(s) 867
EcoT14I CCWWGG 2 cut(s) 6, 1345
EcoT38I GRGCYC 2 cut(s) 205, 1368
ErhI CCWWGG 2 cut(s) 6, 1345
Esp3I CGTCTC 1 cut(s) 1176
FalI AAGNNNNNCTT 2 cut(s) 398, 430
FaqI GGGAC 2 cut(s) 1232, 1263
FauI CCCGC 1 cut(s) 1355
FbaI TGATCA 1 cut(s) 700
FblI GTMKAC 1 cut(s) 961
Fnu4HI GCNGC 2 cut(s) 79, 617
FriOI GRGCYC 2 cut(s) 205, 1368
Fsp4HI GCNGC 2 cut(s) 79, 617
FspBI CTAG 6 cut(s) 737, 851, 875, 887, 1020, 1058
GluI GCNGC 2 cut(s) 79, 617
GsuI CTGGAG 1 cut(s) 1451
HaeIII GGCC 2 cut(s) 11, 1574
HapII CCGG 3 cut(s) 96, 1443, 1575
HgaI GACGC 1 cut(s) 1066
Hin1I GRCGYC 1 cut(s) 1221
HindIII AAGCTT 2 cut(s) 1477, 1541
HinfI GANTC 5 cut(s) 746, 900, 970, 1210, 1468
HpaII CCGG 3 cut(s) 96, 1443, 1575
HphI GGTGA 7 cut(s) 96, 355, 550, 695, 1134, 1398, 1517
Hpy166II GTNNAC 4 cut(s) 962, 1256, 1287, 1452
Hpy188I TCNGA 6 cut(s) 48, 56, 751, 899, 1132, 1160
Hpy188III TCNNGA 8 cut(s) 19, 166, 502, 544, 1150, 1181, 1253, 1460
Hpy8I GTNNAC 4 cut(s) 962, 1256, 1287, 1452
Hpy99I CGWCG 3 cut(s) 932, 1082, 1226
HpyAV CCTTC 6 cut(s) 191, 541, 1013, 1232, 1429, 1577
HpyCH4III ACNGT 3 cut(s) 948, 1156, 1420
HpyCH4IV ACGT 7 cut(s) 192, 930, 1035, 1109, 1221, 1332, 1497
HpyCH4V TGCA 5 cut(s) 92, 723, 1319, 1501, 1536
HpyF10VI GCNNNNNNNGC 1 cut(s) 254
HpyF3I CTNAG 6 cut(s) 53, 405, 792, 1118, 1131, 1268
HpySE526I ACGT 7 cut(s) 192, 930, 1035, 1109, 1221, 1332, 1497
Hsp92I GRCGYC 1 cut(s) 1221
Ksp22I TGATCA 1 cut(s) 700
Kzo9I GATC 8 cut(s) 155, 180, 498, 540, 700, 1134, 1410, 1472
LmnI GCTCC 3 cut(s) 200, 550, 759
Lsp1109I GCAGC 1 cut(s) 90
LweI GCATC 1 cut(s) 12
MaeI CTAG 6 cut(s) 737, 851, 875, 887, 1020, 1058
MaeII ACGT 7 cut(s) 192, 930, 1035, 1109, 1221, 1332, 1497
MaeIII GTNAC 5 cut(s) 317, 867, 1040, 1105, 1298
MalI GATC 8 cut(s) 157, 182, 500, 542, 702, 1136, 1412, 1474
MboI GATC 8 cut(s) 155, 180, 498, 540, 700, 1134, 1410, 1472
MboII GAAGA 7 cut(s) 403, 431, 605, 638, 778, 886, 1099
MfeI CAATTG 1 cut(s) 669
MflI RGATCY 1 cut(s) 1134
MhlI GDGCHC 3 cut(s) 205, 277, 1368
MlyI GAGTC 1 cut(s) 964
MmeI TCCRAC 2 cut(s) 411, 711
MroXI GAANNNNTTC 2 cut(s) 1002, 1308
MseI TTAA 8 cut(s) 228, 269, 366, 512, 696, 1163, 1565, 1609
MslI CAYNNNNRTG 1 cut(s) 242
MspCI CTTAAG 1 cut(s) 268
MspI CCGG 3 cut(s) 96, 1443, 1575
MspR9I CCNGG 2 cut(s) 1444, 1576
MunI CAATTG 1 cut(s) 669
Mva1269I GAATGC 1 cut(s) 1538
MwoI GCNNNNNNNGC 1 cut(s) 254
NciI CCSGG 2 cut(s) 1444, 1576
NcoI CCATGG 2 cut(s) 6, 1345
NdeII GATC 8 cut(s) 155, 180, 498, 540, 700, 1134, 1410, 1472
NlaIV GGNNCC 1 cut(s) 1380
NmuCI GTSAC 2 cut(s) 317, 1298
NspI RCATGY 2 cut(s) 1251, 1342
PciI ACATGT 1 cut(s) 1247
PcsI WCGNNNNNNNCGW 3 cut(s) 164, 189, 318
PctI GAATGC 1 cut(s) 1538
PdmI GAANNNNTTC 2 cut(s) 1002, 1308
PfeI GAWTC 4 cut(s) 746, 900, 1210, 1468
PkrI GCNGC 2 cut(s) 80, 618
Ple19I CGATCG 1 cut(s) 1413
PleI GAGTC 1 cut(s) 964
PpsI GAGTC 1 cut(s) 964
Ppu21I YACGTR 1 cut(s) 1498
PscI ACATGT 1 cut(s) 1247
Psp124BI GAGCTC 1 cut(s) 205
PspEI GGTNACC 1 cut(s) 867
PspN4I GGNNCC 1 cut(s) 1380
PspPI GGNCC 2 cut(s) 980, 1378
PstNI CAGNNNCTG 1 cut(s) 1429
PsuI RGATCY 1 cut(s) 1134
PvuI CGATCG 1 cut(s) 1413
RsaI GTAC 3 cut(s) 1027, 1112, 1603
RsaNI GTAC 3 cut(s) 1026, 1111, 1602
RseI CAYNNNNRTG 1 cut(s) 242
SacI GAGCTC 1 cut(s) 205
SaqAI TTAA 8 cut(s) 228, 269, 366, 512, 696, 1163, 1565, 1609
SatI GCNGC 2 cut(s) 79, 617
Sau3AI GATC 8 cut(s) 155, 180, 498, 540, 700, 1134, 1410, 1472
Sau96I GGNCC 2 cut(s) 980, 1378
SchI GAGTC 1 cut(s) 964
ScrFI CCNGG 2 cut(s) 1444, 1576
SduI GDGCHC 3 cut(s) 205, 277, 1368
SfaNI GCATC 1 cut(s) 12
SinI GGWCC 2 cut(s) 980, 1378
SmiMI CAYNNNNRTG 1 cut(s) 242
SmlI CTYRAG 2 cut(s) 268, 1367
SmoI CTYRAG 2 cut(s) 268, 1367
SsiI CCGC 4 cut(s) 488, 567, 617, 1362
SspI AATATT 1 cut(s) 858
SspMI CTAG 6 cut(s) 737, 851, 875, 887, 1020, 1058
SstI GAGCTC 1 cut(s) 205
StyD4I CCNGG 2 cut(s) 1442, 1574
StyI CCWWGG 2 cut(s) 6, 1345
TaaI ACNGT 3 cut(s) 948, 1156, 1420
TaiI ACGT 7 cut(s) 195, 933, 1038, 1112, 1224, 1335, 1500
TaqI TCGA 6 cut(s) 158, 501, 817, 1180, 1413, 1471
TatI WGTACW 1 cut(s) 1601
TauI GCSGC 1 cut(s) 619
TfiI GAWTC 4 cut(s) 746, 900, 1210, 1468
Tru1I TTAA 8 cut(s) 228, 269, 366, 512, 696, 1163, 1565, 1609
Tru9I TTAA 8 cut(s) 228, 269, 366, 512, 696, 1163, 1565, 1609
TscAI CASTG 4 cut(s) 322, 924, 961, 1089
TseFI GTSAC 2 cut(s) 317, 1298
TseI GCWGC 1 cut(s) 78
Tsp45I GTSAC 2 cut(s) 317, 1298
TspDTI ATGAA 2 cut(s) 226, 1412
TspGWI ACGGA 1 cut(s) 1200
TspRI CASTG 4 cut(s) 322, 924, 961, 1089
Vha464I CTTAAG 1 cut(s) 268
VpaK11BI GGWCC 2 cut(s) 980, 1378
XagI CCTNNNNNAGG 1 cut(s) 1007
XapI RAATTY 2 cut(s) 262, 692
XceI RCATGY 2 cut(s) 1251, 1342
XmiI GTMKAC 1 cut(s) 961
XmnI GAANNNNTTC 2 cut(s) 1002, 1308
XspI CTAG 6 cut(s) 737, 851, 875, 887, 1020, 1058
ZraI GACGTC 1 cut(s) 1222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.