Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g28900 |
| malus_domestica | MD17G1220000.v1.1 |
| prunus_persica | Prupe.3G095700_v2.0.a1 |
| pyrus_communis | pycom17g22490 |
| rosa_laevigata | RLG00000019340 |
| rosa_multiflora | Rmu_co8401069.1_g000001 Rmu_sc0016125.1_g000001 Rmu_sc0017323.1_g000012 |
| rosa_rugosa | Rorug02G0312000 |
| rosa_samantha | Rh2AG364800 Rh2BG370500 Rh2CG348000 Rh2DG387400 |
| rosa_wichuraiana | Rw2G029730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 181, 223 |
| AciI | CCGC | 2 cut(s) | 69, 425 |
| AclWI | GGATC | 1 cut(s) | 469 |
| AcsI | RAATTY | 2 cut(s) | 379, 664 |
| AcuI | CTGAAG | 1 cut(s) | 264 |
| AfaI | GTAC | 1 cut(s) | 406 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 198, 642 |
| AgsI | TTSAA | 2 cut(s) | 251, 571 |
| AjnI | CCWGG | 2 cut(s) | 64, 635 |
| AluBI | AGCT | 3 cut(s) | 82, 112, 247 |
| AluI | AGCT | 3 cut(s) | 82, 112, 247 |
| Alw21I | GWGCWC | 1 cut(s) | 114 |
| Alw26I | GTCTC | 2 cut(s) | 396, 614 |
| AlwI | GGATC | 1 cut(s) | 469 |
| ApeKI | GCWGC | 5 cut(s) | 30, 82, 104, 163, 712 |
| ApoI | RAATTY | 2 cut(s) | 379, 664 |
| AspS9I | GGNCC | 1 cut(s) | 540 |
| AsuHPI | GGTGA | 3 cut(s) | 53, 264, 572 |
| AvaII | GGWCC | 1 cut(s) | 540 |
| BanI | GGYRCC | 2 cut(s) | 181, 223 |
| BanII | GRGCYC | 1 cut(s) | 114 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 592, 624 |
| BbsI | GAAGAC | 1 cut(s) | 682 |
| Bbv12I | GWGCWC | 1 cut(s) | 114 |
| BbvI | GCAGC | 5 cut(s) | 42, 69, 116, 175, 724 |
| BccI | CCATC | 1 cut(s) | 703 |
| BciT130I | CCWGG | 2 cut(s) | 66, 637 |
| BcoDI | GTCTC | 2 cut(s) | 396, 614 |
| BisI | GCNGC | 5 cut(s) | 31, 83, 105, 164, 713 |
| BlsI | GCNGC | 5 cut(s) | 32, 84, 106, 165, 714 |
| Bme1390I | CCNGG | 2 cut(s) | 66, 637 |
| Bme18I | GGWCC | 1 cut(s) | 540 |
| BmgT120I | GGNCC | 1 cut(s) | 540 |
| BmiI | GGNNCC | 4 cut(s) | 125, 183, 225, 541 |
| BmrFI | CCNGG | 2 cut(s) | 66, 637 |
| BmsI | GCATC | 3 cut(s) | 33, 412, 738 |
| BpiI | GAAGAC | 1 cut(s) | 682 |
| BpmI | CTGGAG | 2 cut(s) | 684, 743 |
| Bpu10I | CCTNAGC | 2 cut(s) | 119, 197 |
| BpuEI | CTTGAG | 1 cut(s) | 492 |
| BsaAI | YACGTR | 1 cut(s) | 220 |
| BsaBI | GATNNNNATC | 1 cut(s) | 694 |
| BsaI | GGTCTC | 1 cut(s) | 614 |
| BsaJI | CCNNGG | 3 cut(s) | 64, 167, 624 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 376, 406 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 198, 642 |
| Bse1I | ACTGG | 1 cut(s) | 597 |
| Bse8I | GATNNNNATC | 1 cut(s) | 694 |
| BseBI | CCWGG | 2 cut(s) | 66, 637 |
| BseDI | CCNNGG | 3 cut(s) | 64, 167, 624 |
| BseGI | GGATG | 1 cut(s) | 145 |
| BseJI | GATNNNNATC | 1 cut(s) | 694 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 198, 642 |
| BseMII | CTCAG | 1 cut(s) | 603 |
| BseNI | ACTGG | 1 cut(s) | 597 |
| BseRI | GAGGAG | 4 cut(s) | 506, 509, 655, 658 |
| BseXI | GCAGC | 5 cut(s) | 42, 69, 116, 175, 724 |
| BshNI | GGYRCC | 2 cut(s) | 181, 223 |
| BsiHKAI | GWGCWC | 1 cut(s) | 114 |
| BslFI | GGGAC | 1 cut(s) | 553 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 198, 642 |
| BsmAI | GTCTC | 2 cut(s) | 396, 614 |
| BsmFI | GGGAC | 1 cut(s) | 553 |
| BsmI | GAATGC | 1 cut(s) | 268 |
| Bso31I | GGTCTC | 1 cut(s) | 614 |
| Bsp1286I | GDGCHC | 1 cut(s) | 114 |
| Bsp1407I | TGTACA | 1 cut(s) | 404 |
| Bsp143I | GATC | 3 cut(s) | 322, 461, 703 |
| Bsp19I | CCATGG | 1 cut(s) | 167 |
| BspACI | CCGC | 2 cut(s) | 69, 425 |
| BspCNI | CTCAG | 1 cut(s) | 604 |
| BspHI | TCATGA | 2 cut(s) | 286, 369 |
| BspLI | GGNNCC | 4 cut(s) | 125, 183, 225, 541 |
| BspPI | GGATC | 1 cut(s) | 469 |
| BspT107I | GGYRCC | 2 cut(s) | 181, 223 |
| BspTNI | GGTCTC | 1 cut(s) | 614 |
| BsrGI | TGTACA | 1 cut(s) | 404 |
| BsrI | ACTGG | 1 cut(s) | 597 |
| BssECI | CCNNGG | 3 cut(s) | 64, 167, 624 |
| BssMI | GATC | 3 cut(s) | 322, 461, 703 |
| BssT1I | CCWWGG | 2 cut(s) | 167, 624 |
| Bst2UI | CCWGG | 2 cut(s) | 66, 637 |
| Bst6I | CTCTTC | 1 cut(s) | 102 |
| BstAUI | TGTACA | 1 cut(s) | 404 |
| BstBAI | YACGTR | 1 cut(s) | 220 |
| BstC8I | GCNNGC | 1 cut(s) | 71 |
| BstDEI | CTNAG | 4 cut(s) | 119, 197, 612, 684 |
| BstDSI | CCRYGG | 1 cut(s) | 167 |
| BstF5I | GGATG | 1 cut(s) | 145 |
| BstKTI | GATC | 3 cut(s) | 325, 464, 706 |
| BstMAI | GTCTC | 2 cut(s) | 396, 614 |
| BstMBI | GATC | 3 cut(s) | 322, 461, 703 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 30, 79, 179, 253, 525 |
| BstNI | CCWGG | 2 cut(s) | 66, 637 |
| BstNSI | RCATGY | 1 cut(s) | 77 |
| BstSCI | CCNGG | 2 cut(s) | 64, 635 |
| BstV1I | GCAGC | 5 cut(s) | 42, 69, 116, 175, 724 |
| BstV2I | GAAGAC | 1 cut(s) | 682 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 708 |
| BtgI | CCRYGG | 1 cut(s) | 167 |
| BtsCI | GGATG | 1 cut(s) | 145 |
| Cac8I | GCNNGC | 1 cut(s) | 71 |
| CciI | TCATGA | 2 cut(s) | 286, 369 |
| Cfr13I | GGNCC | 1 cut(s) | 540 |
| Csp6I | GTAC | 1 cut(s) | 405 |
| CviJI | RGCY | 9 cut(s) | 19, 82, 93, 112, 166, 247, 256, 446, 715 |
| CviKI_1 | RGCY | 9 cut(s) | 19, 82, 93, 112, 166, 247, 256, 446, 715 |
| CviQI | GTAC | 1 cut(s) | 405 |
| DdeI | CTNAG | 4 cut(s) | 119, 197, 612, 684 |
| DpnI | GATC | 3 cut(s) | 324, 463, 705 |
| DpnII | GATC | 3 cut(s) | 322, 461, 703 |
| DraI | TTTAAA | 1 cut(s) | 264 |
| Eam1104I | CTCTTC | 1 cut(s) | 102 |
| EarI | CTCTTC | 1 cut(s) | 102 |
| Ecl136II | GAGCTC | 1 cut(s) | 112 |
| Eco130I | CCWWGG | 2 cut(s) | 167, 624 |
| Eco24I | GRGCYC | 1 cut(s) | 114 |
| Eco31I | GGTCTC | 1 cut(s) | 614 |
| Eco47I | GGWCC | 1 cut(s) | 540 |
| Eco53kI | GAGCTC | 1 cut(s) | 112 |
| Eco57I | CTGAAG | 1 cut(s) | 264 |
| EcoICRI | GAGCTC | 1 cut(s) | 112 |
| EcoRI | GAATTC | 1 cut(s) | 379 |
| EcoRII | CCWGG | 2 cut(s) | 64, 635 |
| EcoT14I | CCWWGG | 2 cut(s) | 167, 624 |
| EcoT38I | GRGCYC | 1 cut(s) | 114 |
| ErhI | CCWWGG | 2 cut(s) | 167, 624 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 244, 276 |
| FaqI | GGGAC | 1 cut(s) | 553 |
| FauI | CCCGC | 1 cut(s) | 62 |
| FauNDI | CATATG | 1 cut(s) | 397 |
| Fnu4HI | GCNGC | 5 cut(s) | 31, 83, 105, 164, 713 |
| FokI | GGATG | 1 cut(s) | 132 |
| FriOI | GRGCYC | 1 cut(s) | 114 |
| Fsp4HI | GCNGC | 5 cut(s) | 31, 83, 105, 164, 713 |
| GluI | GCNGC | 5 cut(s) | 31, 83, 105, 164, 713 |
| GsuI | CTGGAG | 2 cut(s) | 684, 743 |
| HindIII | AAGCTT | 1 cut(s) | 245 |
| HinfI | GANTC | 2 cut(s) | 238, 653 |
| HphI | GGTGA | 3 cut(s) | 53, 264, 572 |
| Hpy166II | GTNNAC | 2 cut(s) | 61, 439 |
| Hpy188I | TCNGA | 3 cut(s) | 243, 327, 613 |
| Hpy188III | TCNNGA | 5 cut(s) | 287, 370, 509, 701, 722 |
| Hpy8I | GTNNAC | 2 cut(s) | 61, 439 |
| HpyCH4IV | ACGT | 1 cut(s) | 219 |
| HpyCH4V | TGCA | 6 cut(s) | 24, 85, 104, 143, 295, 458 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 30, 79, 179, 253, 525 |
| HpyF3I | CTNAG | 4 cut(s) | 119, 197, 612, 684 |
| HpySE526I | ACGT | 1 cut(s) | 219 |
| Kzo9I | GATC | 3 cut(s) | 322, 461, 703 |
| LmnI | GCTCC | 1 cut(s) | 645 |
| Lsp1109I | GCAGC | 5 cut(s) | 42, 69, 116, 175, 724 |
| LweI | GCATC | 3 cut(s) | 33, 412, 738 |
| MaeII | ACGT | 1 cut(s) | 219 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MalI | GATC | 3 cut(s) | 324, 463, 705 |
| MboI | GATC | 3 cut(s) | 322, 461, 703 |
| MboII | GAAGA | 6 cut(s) | 52, 89, 332, 496, 600, 687 |
| MfeI | CAATTG | 1 cut(s) | 174 |
| MhlI | GDGCHC | 1 cut(s) | 114 |
| MluCI | AATT | 7 cut(s) | 54, 174, 349, 358, 379, 514, 664 |
| MnlI | CCTC | 7 cut(s) | 105, 159, 484, 487, 568, 633, 636 |
| MseI | TTAA | 2 cut(s) | 263, 549 |
| MslI | CAYNNNNRTG | 1 cut(s) | 561 |
| MspR9I | CCNGG | 2 cut(s) | 66, 637 |
| MunI | CAATTG | 1 cut(s) | 174 |
| Mva1269I | GAATGC | 1 cut(s) | 268 |
| MvaI | CCWGG | 2 cut(s) | 66, 637 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 30, 79, 179, 253, 525 |
| NcoI | CCATGG | 1 cut(s) | 167 |
| NdeI | CATATG | 1 cut(s) | 397 |
| NdeII | GATC | 3 cut(s) | 322, 461, 703 |
| NlaIV | GGNNCC | 4 cut(s) | 125, 183, 225, 541 |
| NspI | RCATGY | 1 cut(s) | 77 |
| PagI | TCATGA | 2 cut(s) | 286, 369 |
| PctI | GAATGC | 1 cut(s) | 268 |
| PfeI | GAWTC | 2 cut(s) | 238, 653 |
| PkrI | GCNGC | 5 cut(s) | 32, 84, 106, 165, 714 |
| Ppu21I | YACGTR | 1 cut(s) | 220 |
| Psp124BI | GAGCTC | 1 cut(s) | 114 |
| Psp6I | CCWGG | 2 cut(s) | 64, 635 |
| PspGI | CCWGG | 2 cut(s) | 64, 635 |
| PspN4I | GGNNCC | 4 cut(s) | 125, 183, 225, 541 |
| PspPI | GGNCC | 1 cut(s) | 540 |
| RsaI | GTAC | 1 cut(s) | 406 |
| RsaNI | GTAC | 1 cut(s) | 405 |
| RseI | CAYNNNNRTG | 1 cut(s) | 561 |
| SacI | GAGCTC | 1 cut(s) | 114 |
| SaqAI | TTAA | 2 cut(s) | 263, 549 |
| SatI | GCNGC | 5 cut(s) | 31, 83, 105, 164, 713 |
| Sau3AI | GATC | 3 cut(s) | 322, 461, 703 |
| Sau96I | GGNCC | 1 cut(s) | 540 |
| ScrFI | CCNGG | 2 cut(s) | 66, 637 |
| SduI | GDGCHC | 1 cut(s) | 114 |
| SetI | ASST | 6 cut(s) | 84, 114, 222, 249, 277, 685 |
| SfaNI | GCATC | 3 cut(s) | 33, 412, 738 |
| SinI | GGWCC | 1 cut(s) | 540 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 561 |
| SmlI | CTYRAG | 1 cut(s) | 507 |
| SmoI | CTYRAG | 1 cut(s) | 507 |
| Sse9I | AATT | 7 cut(s) | 54, 174, 349, 358, 379, 514, 664 |
| SsiI | CCGC | 2 cut(s) | 69, 425 |
| SstI | GAGCTC | 1 cut(s) | 114 |
| StyD4I | CCNGG | 2 cut(s) | 64, 635 |
| StyI | CCWWGG | 2 cut(s) | 167, 624 |
| TaiI | ACGT | 1 cut(s) | 222 |
| TaqI | TCGA | 1 cut(s) | 78 |
| TasI | AATT | 7 cut(s) | 54, 174, 349, 358, 379, 514, 664 |
| TatI | WGTACW | 1 cut(s) | 404 |
| TfiI | GAWTC | 2 cut(s) | 238, 653 |
| Tru1I | TTAA | 2 cut(s) | 263, 549 |
| Tru9I | TTAA | 2 cut(s) | 263, 549 |
| TseI | GCWGC | 5 cut(s) | 30, 82, 104, 163, 712 |
| TspDTI | ATGAA | 4 cut(s) | 275, 303, 386, 594 |
| VpaK11BI | GGWCC | 1 cut(s) | 540 |
| XapI | RAATTY | 2 cut(s) | 379, 664 |
| XceI | RCATGY | 1 cut(s) | 77 |