Prupe.3G098400_v2.0.a1

Acetyltransferase (GNAT) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0016888
Physical Location & Seq
Forward (+)
7560072 .. 7562915
2844 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G098400.1

Sequence Viewer

Length: 1233 bp
ATGGTGCCAACTAAGGTAGCTGCTGAAAATTCGCCATCTCTGGTGCTGCCGCTTGAAGTGGTGGTGAGAGAATATGACAAAGAAAGAGATAAGGCGGCGGTGGAGGAGATGGAGAGGCGGTGTGAGCTTGGGCAGCGGGGAAAACCTTCTCTAGTCACTGATCTCATGGGTGACCCTATATGTCGCATTCGCCATTTCCCAACACACGTTATGCTGGTTGCAGAGTATGGAGAAAATGAGATTGTGGGTGTCATAAGGGGTTGTGTAAAAGAGGCCACAAGAGGAAATTCAGTTTTTGTAAAGCTGGCTTATATTTTGGGACTAAGGGTCTCTCCCACGCACTGGAGGCTAGGCATTGGCACGAAACTAGTGAGACATTTAGAAGAATGGTGCAAGGAAAAGGGAGCCGAGTATGTATATATGGCCACAGACTGCACCAACGAGGCCTCAATCAATCTGTTCACTATCAAATGTGCATACAAAAAGTTTCGTACACCCACCATTTTGGTCCAACCAGTCCACGCCCACTACAAGCCAATATCTTCATCAGCCAATACTAATATTGCAATTGTTCAGCTGCCCACAACCCTAGCAGCCTCAATCTACCGCCAACTCTTTTCCCAATCATCAGAATTCTTCCCCAAAGACATAGACGCCATTTTGGCCTGCAACCTCAGCTTGGGTACTTTCATGGCCCTACCAGTAAAGTCCCTCGCAAAATGGGACCCACAAAAGTGGACCCTGCCTCCAAACTTCGCCATCCTTAGTGTTTGGAACACCAAAGAAGTGTTCAGGTTACAAGTGAAGGGAGTTTCAAGCCTAACATATGCATGCTGTGTAGGTACAAGGCTTGTAGATGCATGGCTTCCATGGCTCAGATTGCCTTCGTTTCCTAATTTCTTTAAGCAATTTGGGGTTTATTTCATGTATGGCTTGCACATGGAAGGGGAGCATGGAAATCGGCTGATGAAGGGTTTATGCAACTTCGTGCATAACATGGCTAGGGATGATCGTGGATGTGCTGCTGTGGTCGCTGAGGTGGGCCAGAGGGACCCAGTTCGAGAGTCGGTCCCACATTGGAGAAAGTTTTCATGGGCAGAAGACACGTGGTGTGTCAAGAAGCTTGATGAAGCAAAGCAAGGAGGAGAGAGATCATCATCAGATCAGTTTGATTGGACCAACACTCCATCTTCTTCTTCGTCGCATATTTTTGTTGACCCTCGTGACTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

411

Amino Acids

46.43

Weight (kDa)

8.63

Isoelectric Point (pI)

35.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016888)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g28600
malus_domestica MD09G1224900.v1.1
prunus_persica Prupe.3G098400_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0132941
rosa_laevigata RLG00000019294
rosa_multiflora Rmu_co8485787.1_g000001 Rmu_sc0001314.1_g000006
rosa_roxburghii Rroxscaffold_2G00111600
rosa_rugosa Rorug02G0308600
rosa_samantha Rh2AG361000 Rh2BG366900 Rh2CG344300 Rh2DG383900
rosa_wichuraiana Rw2G029360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 1 cut(s) 342
AciI CCGC 6 cut(s) 50, 95, 98, 118, 136, 607
AcoI YGGCCR 1 cut(s) 423
AcsI RAATTY 3 cut(s) 28, 286, 632
AcvI CACGTG 1 cut(s) 1107
AcyI GRCGYC 1 cut(s) 654
AdeI CACNNNGTG 1 cut(s) 1110
AfaI GTAC 3 cut(s) 493, 685, 844
AfiI CCNNNNNNNGG 2 cut(s) 342, 679
AflIII ACRYGT 2 cut(s) 205, 1104
AgsI TTSAA 2 cut(s) 56, 816
AhdI GACNNNNNGTC 1 cut(s) 326
AhlI ACTAGT 1 cut(s) 367
AjuI GAANNNNNNNTTGG 2 cut(s) 773, 805
AleI CACNNNNGTG 1 cut(s) 733
AluBI AGCT 6 cut(s) 20, 127, 304, 577, 678, 1123
AluI AGCT 6 cut(s) 20, 127, 304, 577, 678, 1123
Alw26I GTCTC 2 cut(s) 334, 367
AoxI GGCC 6 cut(s) 273, 423, 444, 663, 693, 1042
ApeKI GCWGC 6 cut(s) 20, 46, 133, 577, 593, 1022
ApoI RAATTY 3 cut(s) 28, 286, 632
Asp700I GAANNNNTTC 2 cut(s) 145, 1087
AspS9I GGNCC 8 cut(s) 508, 694, 724, 738, 1042, 1051, 1069, 1176
AsuHPI GGTGA 2 cut(s) 76, 182
AvaII GGWCC 6 cut(s) 508, 724, 738, 1051, 1069, 1176
BalI TGGCCA 1 cut(s) 425
BanI GGYRCC 1 cut(s) 4
BauI CACGAG 1 cut(s) 1221
BbrPI CACGTG 1 cut(s) 1107
BbsI GAAGAC 1 cut(s) 1107
BbvCI CCTCAGC 2 cut(s) 674, 1035
BbvI GCAGC 6 cut(s) 7, 33, 145, 564, 605, 1009
BccI CCATC 4 cut(s) 43, 103, 767, 1195
BcgI CGANNNNNNTGC 2 cut(s) 941, 975
BcoDI GTCTC 2 cut(s) 334, 367
BcuI ACTAGT 1 cut(s) 367
BfaI CTAG 5 cut(s) 152, 350, 368, 590, 1002
BglI GCCNNNNNGGC 1 cut(s) 662
BisI GCNGC 8 cut(s) 21, 47, 50, 96, 134, 578, 594, 1023
BlsI GCNGC 8 cut(s) 22, 48, 51, 97, 135, 579, 595, 1024
Bme18I GGWCC 6 cut(s) 508, 724, 738, 1051, 1069, 1176
BmeRI GACNNNNNGTC 1 cut(s) 326
BmgT120I GGNCC 8 cut(s) 508, 694, 724, 738, 1042, 1051, 1069, 1176
BmiI GGNNCC 8 cut(s) 6, 406, 725, 726, 740, 1052, 1053, 1071
BmrI ACTGGG 1 cut(s) 1049
BmsI GCATC 1 cut(s) 847
BmuI ACTGGG 1 cut(s) 1049
BpiI GAAGAC 1 cut(s) 1107
BpmI CTGGAG 1 cut(s) 364
Bpu10I CCTNAGC 2 cut(s) 674, 1035
BsaAI YACGTR 1 cut(s) 1107
BsaBI GATNNNNATC 1 cut(s) 1156
BsaHI GRCGYC 1 cut(s) 654
BsaI GGTCTC 1 cut(s) 334
BsaJI CCNNGG 1 cut(s) 869
BsaXI ACNNNNNCTCC 6 cut(s) 104, 134, 730, 760, 1168, 1198
Bsc4I CCNNNNNNNGG 2 cut(s) 342, 679
Bse1I ACTGG 4 cut(s) 347, 515, 701, 1055
Bse8I GATNNNNATC 1 cut(s) 1156
BseDI CCNNGG 1 cut(s) 869
BseGI GGATG 3 cut(s) 759, 1012, 1022
BseJI GATNNNNATC 1 cut(s) 1156
BseLI CCNNNNNNNGG 2 cut(s) 342, 679
BseMII CTCAG 3 cut(s) 688, 889, 1026
BseNI ACTGG 4 cut(s) 347, 515, 701, 1055
BseRI GAGGAG 2 cut(s) 119, 1158
BseXI GCAGC 6 cut(s) 7, 33, 145, 564, 605, 1009
BsgI GTGCAG 1 cut(s) 418
BshFI GGCC 6 cut(s) 275, 425, 446, 665, 695, 1044
BshNI GGYRCC 1 cut(s) 4
BslFI GGGAC 5 cut(s) 333, 694, 737, 1055, 1064
BslI CCNNNNNNNGG 2 cut(s) 342, 679
BsmAI GTCTC 2 cut(s) 334, 367
BsmFI GGGAC 5 cut(s) 333, 694, 737, 1055, 1064
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 6 cut(s) 275, 425, 446, 665, 695, 1044
Bso31I GGTCTC 1 cut(s) 334
Bsp143I GATC 4 cut(s) 160, 1009, 1151, 1162
Bsp19I CCATGG 1 cut(s) 869
BspACI CCGC 6 cut(s) 50, 95, 98, 118, 136, 607
BspANI GGCC 6 cut(s) 275, 425, 446, 665, 695, 1044
BspCNI CTCAG 3 cut(s) 687, 888, 1027
BspLI GGNNCC 8 cut(s) 6, 406, 725, 726, 740, 1052, 1053, 1071
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 334
BsrI ACTGG 4 cut(s) 347, 515, 701, 1055
BssECI CCNNGG 1 cut(s) 869
BssMI GATC 4 cut(s) 160, 1009, 1151, 1162
BssNI GRCGYC 1 cut(s) 654
BssSI CACGAG 1 cut(s) 1221
BssT1I CCWWGG 1 cut(s) 869
Bst2BI CACGAG 1 cut(s) 1221
BstACI GRCGYC 1 cut(s) 654
BstBAI YACGTR 1 cut(s) 1107
BstC8I GCNNGC 4 cut(s) 306, 667, 832, 935
BstDEI CTNAG 6 cut(s) 12, 323, 674, 764, 875, 1035
BstDSI CCRYGG 1 cut(s) 869
BstEII GGTNACC 1 cut(s) 170
BstF5I GGATG 3 cut(s) 759, 1012, 1022
BstKTI GATC 4 cut(s) 163, 1012, 1154, 1165
BstMAI GTCTC 2 cut(s) 334, 367
BstMBI GATC 4 cut(s) 160, 1009, 1151, 1162
BstMWI GCNNNNNNNGC 8 cut(s) 124, 133, 346, 662, 675, 871, 880, 1031
BstNSI RCATGY 1 cut(s) 834
BstPI GGTNACC 1 cut(s) 170
BstV1I GCAGC 6 cut(s) 7, 33, 145, 564, 605, 1009
BstV2I GAAGAC 1 cut(s) 1107
BstXI CCANNNNNNTGG 2 cut(s) 505, 735
BsuRI GGCC 6 cut(s) 275, 425, 446, 665, 695, 1044
BtgI CCRYGG 1 cut(s) 869
BtsCI GGATG 3 cut(s) 759, 1012, 1022
BtsIMutI CAGTG 2 cut(s) 156, 340
Cac8I GCNNGC 4 cut(s) 306, 667, 832, 935
Cfr13I GGNCC 8 cut(s) 508, 694, 724, 738, 1042, 1051, 1069, 1176
CseI GACGC 1 cut(s) 662
Csp6I GTAC 3 cut(s) 492, 684, 843
CviQI GTAC 3 cut(s) 492, 684, 843
DdeI CTNAG 6 cut(s) 12, 323, 674, 764, 875, 1035
DpnI GATC 4 cut(s) 162, 1011, 1153, 1164
DpnII GATC 4 cut(s) 160, 1009, 1151, 1162
DraIII CACNNNGTG 1 cut(s) 1110
DriI GACNNNNNGTC 1 cut(s) 326
EaeI YGGCCR 1 cut(s) 423
Eam1105I GACNNNNNGTC 1 cut(s) 326
Eco130I CCWWGG 1 cut(s) 869
Eco147I AGGCCT 1 cut(s) 446
Eco31I GGTCTC 1 cut(s) 334
Eco47I GGWCC 6 cut(s) 508, 724, 738, 1051, 1069, 1176
Eco72I CACGTG 1 cut(s) 1107
Eco91I GGTNACC 1 cut(s) 170
EcoO109I RGGNCCY 2 cut(s) 724, 1051
EcoO65I GGTNACC 1 cut(s) 170
EcoRI GAATTC 1 cut(s) 632
EcoT14I CCWWGG 1 cut(s) 869
EcoT22I ATGCAT 2 cut(s) 832, 862
ErhI CCWWGG 1 cut(s) 869
FaqI GGGAC 5 cut(s) 333, 694, 737, 1055, 1064
FauI CCCGC 1 cut(s) 129
FauNDI CATATG 1 cut(s) 826
Fnu4HI GCNGC 8 cut(s) 21, 47, 50, 96, 134, 578, 594, 1023
FokI GGATG 3 cut(s) 746, 1019, 1029
Fsp4HI GCNGC 8 cut(s) 21, 47, 50, 96, 134, 578, 594, 1023
FspBI CTAG 5 cut(s) 152, 350, 368, 590, 1002
GluI GCNGC 8 cut(s) 21, 47, 50, 96, 134, 578, 594, 1023
GsuI CTGGAG 1 cut(s) 364
HaeIII GGCC 6 cut(s) 275, 425, 446, 665, 695, 1044
HgaI GACGC 1 cut(s) 662
Hin1I GRCGYC 1 cut(s) 654
HincII GTYRAC 1 cut(s) 1216
HindII GTYRAC 1 cut(s) 1216
HindIII AAGCTT 1 cut(s) 1121
HinfI GANTC 1 cut(s) 1064
HphI GGTGA 2 cut(s) 76, 182
Hpy166II GTNNAC 5 cut(s) 462, 494, 520, 738, 1216
Hpy188I TCNGA 3 cut(s) 631, 878, 1162
Hpy188III TCNNGA 3 cut(s) 1061, 1117, 1223
Hpy8I GTNNAC 5 cut(s) 462, 494, 520, 738, 1216
Hpy99I CGWCG 1 cut(s) 1204
HpyAV CCTTC 5 cut(s) 156, 799, 894, 938, 964
HpyCH4IV ACGT 2 cut(s) 207, 1106
HpyF10VI GCNNNNNNNGC 8 cut(s) 124, 133, 346, 662, 675, 871, 880, 1031
HpyF3I CTNAG 6 cut(s) 12, 323, 674, 764, 875, 1035
HpySE526I ACGT 2 cut(s) 207, 1106
Hsp92I GRCGYC 1 cut(s) 654
KflI GGGWCCC 2 cut(s) 724, 1051
Kzo9I GATC 4 cut(s) 160, 1009, 1151, 1162
LmnI GCTCC 2 cut(s) 404, 949
Lsp1109I GCAGC 6 cut(s) 7, 33, 145, 564, 605, 1009
LweI GCATC 1 cut(s) 847
MaeI CTAG 5 cut(s) 152, 350, 368, 590, 1002
MaeII ACGT 2 cut(s) 207, 1106
MaeIII GTNAC 4 cut(s) 154, 170, 795, 1223
MalI GATC 4 cut(s) 162, 1011, 1153, 1164
MboI GATC 4 cut(s) 160, 1009, 1151, 1162
MboII GAAGA 7 cut(s) 395, 534, 628, 1112, 1182, 1185, 1188
MfeI CAATTG 1 cut(s) 567
MlsI TGGCCA 1 cut(s) 425
MluCI AATT 6 cut(s) 28, 286, 567, 632, 895, 908
MluNI TGGCCA 1 cut(s) 425
MlyI GAGTC 1 cut(s) 1073
MmeI TCCRAC 1 cut(s) 535
Mox20I TGGCCA 1 cut(s) 425
Mph1103I ATGCAT 2 cut(s) 832, 862
MroXI GAANNNNTTC 2 cut(s) 145, 1087
MscI TGGCCA 1 cut(s) 425
MseI TTAA 1 cut(s) 903
MslI CAYNNNNRTG 2 cut(s) 733, 829
Msp20I TGGCCA 1 cut(s) 425
MspA1I CMGCKG 2 cut(s) 136, 577
MunI CAATTG 1 cut(s) 567
Mva1269I GAATGC 1 cut(s) 186
MwoI GCNNNNNNNGC 8 cut(s) 124, 133, 346, 662, 675, 871, 880, 1031
NcoI CCATGG 1 cut(s) 869
NdeI CATATG 1 cut(s) 826
NdeII GATC 4 cut(s) 160, 1009, 1151, 1162
NlaIV GGNNCC 8 cut(s) 6, 406, 725, 726, 740, 1052, 1053, 1071
NmeAIII GCCGAG 1 cut(s) 433
NmuCI GTSAC 3 cut(s) 154, 170, 1223
NsiI ATGCAT 2 cut(s) 832, 862
NspI RCATGY 1 cut(s) 834
OliI CACNNNNGTG 1 cut(s) 733
PaeI GCATGC 1 cut(s) 834
PceI AGGCCT 1 cut(s) 446
PctI GAATGC 1 cut(s) 186
PdmI GAANNNNTTC 2 cut(s) 145, 1087
PflMI CCANNNNNTGG 1 cut(s) 342
PkrI GCNGC 8 cut(s) 22, 48, 51, 97, 135, 579, 595, 1024
PleI GAGTC 1 cut(s) 1072
PmaCI CACGTG 1 cut(s) 1107
PmlI CACGTG 1 cut(s) 1107
PpsI GAGTC 1 cut(s) 1072
Ppu21I YACGTR 1 cut(s) 1107
PpuMI RGGWCCY 2 cut(s) 724, 1051
Psp5II RGGWCCY 2 cut(s) 724, 1051
PspCI CACGTG 1 cut(s) 1107
PspEI GGTNACC 1 cut(s) 170
PspN4I GGNNCC 8 cut(s) 6, 406, 725, 726, 740, 1052, 1053, 1071
PspPI GGNCC 8 cut(s) 508, 694, 724, 738, 1042, 1051, 1069, 1176
PspPPI RGGWCCY 2 cut(s) 724, 1051
PvuII CAGCTG 1 cut(s) 577
RsaI GTAC 3 cut(s) 493, 685, 844
RsaNI GTAC 3 cut(s) 492, 684, 843
RseI CAYNNNNRTG 2 cut(s) 733, 829
SaqAI TTAA 1 cut(s) 903
SatI GCNGC 8 cut(s) 21, 47, 50, 96, 134, 578, 594, 1023
Sau3AI GATC 4 cut(s) 160, 1009, 1151, 1162
Sau96I GGNCC 8 cut(s) 508, 694, 724, 738, 1042, 1051, 1069, 1176
SchI GAGTC 1 cut(s) 1073
SfaNI GCATC 1 cut(s) 847
SinI GGWCC 6 cut(s) 508, 724, 738, 1051, 1069, 1176
SmiMI CAYNNNNRTG 2 cut(s) 733, 829
SpeI ACTAGT 1 cut(s) 367
SphI GCATGC 1 cut(s) 834
Sse9I AATT 6 cut(s) 28, 286, 567, 632, 895, 908
SseBI AGGCCT 1 cut(s) 446
SsiI CCGC 6 cut(s) 50, 95, 98, 118, 136, 607
SspI AATATT 1 cut(s) 562
SspMI CTAG 5 cut(s) 152, 350, 368, 590, 1002
StuI AGGCCT 1 cut(s) 446
StyI CCWWGG 1 cut(s) 869
TaiI ACGT 2 cut(s) 210, 1109
TaqI TCGA 1 cut(s) 1060
TaqII GACCGA 1 cut(s) 1057
TasI AATT 6 cut(s) 28, 286, 567, 632, 895, 908
TauI GCSGC 2 cut(s) 52, 98
Tru1I TTAA 1 cut(s) 903
Tru9I TTAA 1 cut(s) 903
TscAI CASTG 2 cut(s) 163, 347
TseFI GTSAC 3 cut(s) 154, 170, 1223
TseI GCWGC 6 cut(s) 20, 46, 133, 577, 593, 1022
Tsp45I GTSAC 3 cut(s) 154, 170, 1223
TspDTI ATGAA 6 cut(s) 534, 679, 913, 983, 1080, 1143
TspRI CASTG 2 cut(s) 163, 347
Van91I CCANNNNNTGG 1 cut(s) 342
VpaK11BI GGWCC 6 cut(s) 508, 724, 738, 1051, 1069, 1176
XapI RAATTY 3 cut(s) 28, 286, 632
XceI RCATGY 1 cut(s) 834
XmnI GAANNNNTTC 2 cut(s) 145, 1087
XspI CTAG 5 cut(s) 152, 350, 368, 590, 1002
Zsp2I ATGCAT 2 cut(s) 832, 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.