ABC transporter
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53270 |
| fragaria_vesca | FvH4_3g18590 FvH4_6g27140 |
| malus_domestica | MD03G1240800.v1.1 MD11G1260200.v1.1 |
| prunus_persica | Prupe.3G122400_v2.0.a1 Prupe.3G122400_v2.0.a1 Prupe.4G168100_v2.0.a1 |
| pyrus_communis | pycom03g18730 pycom11g22970 |
| rosa_chinensis | RchiOBHm_Chr2g0129131 RchiOBHm_Chr5g0031401 |
| rosa_laevigata | RLG00000019057 RLG00000033304 |
| rosa_multiflora | Rmu_sc0007782.1_g000009 Rmu_sc0009045.1_g000001 Rmu_sc0018148.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00048940 Rroxscaffold_2G00114830 |
| rosa_rugosa | Rorug02G0285000 Rorug05G0125000 |
| rosa_samantha | Rh2AG337100 Rh2BG345100 Rh2CG324500 Rh2DG361900 Rh5BG217300 Rh5CG241100 Rh5DG222700 |
| rosa_wichuraiana | Rw2G027340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 810 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1146 |
| AccI | GTMKAC | 1 cut(s) | 933 |
| AccII | CGCG | 1 cut(s) | 513 |
| AciI | CCGC | 5 cut(s) | 200, 210, 511, 513, 525 |
| AclWI | GGATC | 3 cut(s) | 247, 563, 1328 |
| AcoI | YGGCCR | 1 cut(s) | 274 |
| AcsI | RAATTY | 1 cut(s) | 1015 |
| AcuI | CTGAAG | 3 cut(s) | 736, 804, 1018 |
| AfaI | GTAC | 6 cut(s) | 268, 392, 564, 682, 1181, 1388 |
| AfeI | AGCGCT | 1 cut(s) | 1039 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 602, 1129, 1146 |
| AflIII | ACRYGT | 1 cut(s) | 475 |
| AgsI | TTSAA | 5 cut(s) | 109, 121, 154, 170, 660 |
| AleI | CACNNNNGTG | 2 cut(s) | 1189, 1315 |
| AluBI | AGCT | 8 cut(s) | 173, 194, 245, 437, 451, 463, 719, 1143 |
| AluI | AGCT | 8 cut(s) | 173, 194, 245, 437, 451, 463, 719, 1143 |
| Alw21I | GWGCWC | 2 cut(s) | 400, 423 |
| Alw26I | GTCTC | 1 cut(s) | 547 |
| Alw44I | GTGCAC | 1 cut(s) | 419 |
| AlwI | GGATC | 3 cut(s) | 247, 563, 1328 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1146 |
| Aor51HI | AGCGCT | 1 cut(s) | 1039 |
| AoxI | GGCC | 2 cut(s) | 274, 429 |
| ApaLI | GTGCAC | 1 cut(s) | 419 |
| ApeKI | GCWGC | 2 cut(s) | 698, 1291 |
| ApoI | RAATTY | 1 cut(s) | 1015 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 856 |
| AspLEI | GCGC | 1 cut(s) | 1040 |
| AspS9I | GGNCC | 1 cut(s) | 556 |
| AsuC2I | CCSGG | 1 cut(s) | 180 |
| AsuHPI | GGTGA | 4 cut(s) | 142, 539, 751, 1286 |
| AvaII | GGWCC | 1 cut(s) | 556 |
| BaeGI | GKGCMC | 1 cut(s) | 423 |
| BalI | TGGCCA | 1 cut(s) | 276 |
| BbsI | GAAGAC | 1 cut(s) | 765 |
| Bbv12I | GWGCWC | 2 cut(s) | 400, 423 |
| BbvI | GCAGC | 2 cut(s) | 685, 1303 |
| BccI | CCATC | 4 cut(s) | 959, 991, 1315, 1356 |
| BclI | TGATCA | 1 cut(s) | 100 |
| BcnI | CCSGG | 1 cut(s) | 180 |
| BcoDI | GTCTC | 1 cut(s) | 547 |
| BfaI | CTAG | 6 cut(s) | 174, 233, 438, 560, 881, 1043 |
| BfoI | RGCGCY | 1 cut(s) | 1041 |
| BfuAI | ACCTGC | 1 cut(s) | 810 |
| BglII | AGATCT | 1 cut(s) | 1391 |
| BisI | GCNGC | 3 cut(s) | 514, 699, 1292 |
| BlsI | GCNGC | 3 cut(s) | 515, 700, 1293 |
| BmcAI | AGTACT | 1 cut(s) | 268 |
| Bme1390I | CCNGG | 1 cut(s) | 180 |
| Bme18I | GGWCC | 1 cut(s) | 556 |
| BmgT120I | GGNCC | 1 cut(s) | 556 |
| BmiI | GGNNCC | 2 cut(s) | 410, 1093 |
| BmrFI | CCNGG | 1 cut(s) | 180 |
| BmrI | ACTGGG | 1 cut(s) | 923 |
| BmsI | GCATC | 1 cut(s) | 1278 |
| BmuI | ACTGGG | 1 cut(s) | 923 |
| BpiI | GAAGAC | 1 cut(s) | 765 |
| BpuEI | CTTGAG | 4 cut(s) | 327, 820, 1186, 1208 |
| BpuMI | CCSGG | 1 cut(s) | 180 |
| BsaJI | CCNNGG | 2 cut(s) | 412, 511 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 602, 1129, 1146 |
| Bse1I | ACTGG | 6 cut(s) | 40, 929, 941, 990, 1151, 1283 |
| Bse3DI | GCAATG | 1 cut(s) | 227 |
| BseDI | CCNNGG | 2 cut(s) | 412, 511 |
| BseGI | GGATG | 3 cut(s) | 595, 1002, 1119 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 602, 1129, 1146 |
| BseMI | GCAATG | 1 cut(s) | 227 |
| BseMII | CTCAG | 1 cut(s) | 446 |
| BseNI | ACTGG | 6 cut(s) | 40, 929, 941, 990, 1151, 1283 |
| BseRI | GAGGAG | 1 cut(s) | 826 |
| BseSI | GKGCMC | 1 cut(s) | 423 |
| BseXI | GCAGC | 2 cut(s) | 685, 1303 |
| BseYI | CCCAGC | 2 cut(s) | 676, 1139 |
| Bsh1236I | CGCG | 1 cut(s) | 513 |
| BshFI | GGCC | 2 cut(s) | 276, 431 |
| BsiHKAI | GWGCWC | 2 cut(s) | 400, 423 |
| BsiSI | CCGG | 2 cut(s) | 179, 572 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 602, 1129, 1146 |
| BsmAI | GTCTC | 1 cut(s) | 547 |
| BsmI | GAATGC | 3 cut(s) | 310, 700, 1263 |
| BsnI | GGCC | 2 cut(s) | 276, 431 |
| Bsp1286I | GDGCHC | 2 cut(s) | 400, 423 |
| Bsp1407I | TGTACA | 1 cut(s) | 390 |
| Bsp143I | GATC | 6 cut(s) | 100, 186, 252, 568, 1320, 1391 |
| Bsp19I | CCATGG | 1 cut(s) | 412 |
| BspACI | CCGC | 5 cut(s) | 200, 210, 511, 513, 525 |
| BspANI | GGCC | 2 cut(s) | 276, 431 |
| BspCNI | CTCAG | 1 cut(s) | 447 |
| BspFNI | CGCG | 1 cut(s) | 513 |
| BspLI | GGNNCC | 2 cut(s) | 410, 1093 |
| BspMI | ACCTGC | 1 cut(s) | 810 |
| BspPI | GGATC | 3 cut(s) | 247, 563, 1328 |
| BspQI | GCTCTTC | 2 cut(s) | 709, 918 |
| BsrDI | GCAATG | 1 cut(s) | 227 |
| BsrGI | TGTACA | 1 cut(s) | 390 |
| BsrI | ACTGG | 6 cut(s) | 40, 929, 941, 990, 1151, 1283 |
| BssECI | CCNNGG | 2 cut(s) | 412, 511 |
| BssMI | GATC | 6 cut(s) | 100, 186, 252, 568, 1320, 1391 |
| BssT1I | CCWWGG | 1 cut(s) | 412 |
| Bst4CI | ACNGT | 3 cut(s) | 97, 373, 395 |
| Bst6I | CTCTTC | 4 cut(s) | 362, 709, 862, 918 |
| BstAUI | TGTACA | 1 cut(s) | 390 |
| BstC8I | GCNNGC | 3 cut(s) | 208, 274, 1030 |
| BstDEI | CTNAG | 3 cut(s) | 260, 455, 1327 |
| BstDSI | CCRYGG | 2 cut(s) | 412, 511 |
| BstEII | GGTNACC | 1 cut(s) | 130 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 600 |
| BstF5I | GGATG | 3 cut(s) | 595, 1002, 1119 |
| BstFNI | CGCG | 1 cut(s) | 513 |
| BstH2I | RGCGCY | 1 cut(s) | 1041 |
| BstHHI | GCGC | 1 cut(s) | 1040 |
| BstKTI | GATC | 6 cut(s) | 103, 189, 255, 571, 1323, 1394 |
| BstMAI | GTCTC | 1 cut(s) | 547 |
| BstMBI | GATC | 6 cut(s) | 100, 186, 252, 568, 1320, 1391 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 212, 522, 592 |
| BstNSI | RCATGY | 1 cut(s) | 479 |
| BstPI | GGTNACC | 1 cut(s) | 130 |
| BstSCI | CCNGG | 1 cut(s) | 178 |
| BstSLI | GKGCMC | 1 cut(s) | 423 |
| BstUI | CGCG | 1 cut(s) | 513 |
| BstV1I | GCAGC | 2 cut(s) | 685, 1303 |
| BstV2I | GAAGAC | 1 cut(s) | 765 |
| BstX2I | RGATCY | 1 cut(s) | 1391 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 553, 936 |
| BstYI | RGATCY | 1 cut(s) | 1391 |
| BsuRI | GGCC | 2 cut(s) | 276, 431 |
| BtgI | CCRYGG | 2 cut(s) | 412, 511 |
| BtsCI | GGATG | 3 cut(s) | 595, 1002, 1119 |
| BtsIMutI | CAGTG | 2 cut(s) | 400, 983 |
| BveI | ACCTGC | 1 cut(s) | 810 |
| Cac8I | GCNNGC | 3 cut(s) | 208, 274, 1030 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1146 |
| CfoI | GCGC | 1 cut(s) | 1040 |
| Cfr13I | GGNCC | 1 cut(s) | 556 |
| Cfr42I | CCGCGG | 1 cut(s) | 514 |
| Csp6I | GTAC | 6 cut(s) | 267, 391, 563, 681, 1180, 1387 |
| CviAII | CATG | 6 cut(s) | 31, 413, 476, 566, 1060, 1156 |
| CviQI | GTAC | 6 cut(s) | 267, 391, 563, 681, 1180, 1387 |
| DdeI | CTNAG | 3 cut(s) | 260, 455, 1327 |
| DpnI | GATC | 6 cut(s) | 102, 188, 254, 570, 1322, 1393 |
| DpnII | GATC | 6 cut(s) | 100, 186, 252, 568, 1320, 1391 |
| EaeI | YGGCCR | 1 cut(s) | 274 |
| Eam1104I | CTCTTC | 4 cut(s) | 362, 709, 862, 918 |
| EarI | CTCTTC | 4 cut(s) | 362, 709, 862, 918 |
| Eco130I | CCWWGG | 1 cut(s) | 412 |
| Eco47I | GGWCC | 1 cut(s) | 556 |
| Eco47III | AGCGCT | 1 cut(s) | 1039 |
| Eco57I | CTGAAG | 3 cut(s) | 736, 804, 1018 |
| Eco91I | GGTNACC | 1 cut(s) | 130 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 600 |
| EcoO65I | GGTNACC | 1 cut(s) | 130 |
| EcoT14I | CCWWGG | 1 cut(s) | 412 |
| ErhI | CCWWGG | 1 cut(s) | 412 |
| FaeI | CATG | 6 cut(s) | 34, 416, 479, 569, 1063, 1159 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 829, 861 |
| FatI | CATG | 6 cut(s) | 30, 412, 475, 565, 1059, 1155 |
| FauI | CCCGC | 1 cut(s) | 193 |
| FbaI | TGATCA | 1 cut(s) | 100 |
| FblI | GTMKAC | 1 cut(s) | 933 |
| Fnu4HI | GCNGC | 3 cut(s) | 514, 699, 1292 |
| FokI | GGATG | 3 cut(s) | 602, 1009, 1106 |
| Fsp4HI | GCNGC | 3 cut(s) | 514, 699, 1292 |
| FspBI | CTAG | 6 cut(s) | 174, 233, 438, 560, 881, 1043 |
| GlaI | GCGC | 1 cut(s) | 1039 |
| GluI | GCNGC | 3 cut(s) | 514, 699, 1292 |
| GsaI | CCCAGC | 2 cut(s) | 680, 1143 |
| HaeII | RGCGCY | 1 cut(s) | 1041 |
| HaeIII | GGCC | 2 cut(s) | 276, 431 |
| HapII | CCGG | 2 cut(s) | 179, 572 |
| HhaI | GCGC | 1 cut(s) | 1040 |
| Hin1II | CATG | 6 cut(s) | 34, 416, 479, 569, 1063, 1159 |
| Hin6I | GCGC | 1 cut(s) | 1038 |
| HinP1I | GCGC | 1 cut(s) | 1038 |
| HinfI | GANTC | 6 cut(s) | 503, 540, 611, 852, 1378, 1401 |
| HpaII | CCGG | 2 cut(s) | 179, 572 |
| HphI | GGTGA | 4 cut(s) | 142, 539, 751, 1286 |
| Hpy166II | GTNNAC | 3 cut(s) | 421, 556, 934 |
| Hpy188I | TCNGA | 3 cut(s) | 321, 1302, 1377 |
| Hpy188III | TCNNGA | 8 cut(s) | 121, 151, 344, 603, 766, 837, 1198, 1285 |
| Hpy8I | GTNNAC | 3 cut(s) | 421, 556, 934 |
| Hpy99I | CGWCG | 1 cut(s) | 619 |
| HpyAV | CCTTC | 7 cut(s) | 760, 772, 779, 899, 948, 1105, 1224 |
| HpyCH4III | ACNGT | 3 cut(s) | 97, 373, 395 |
| HpyCH4V | TGCA | 8 cut(s) | 206, 421, 779, 805, 1159, 1243, 1263, 1291 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 212, 522, 592 |
| HpyF3I | CTNAG | 3 cut(s) | 260, 455, 1327 |
| Hsp92II | CATG | 6 cut(s) | 34, 416, 479, 569, 1063, 1159 |
| HspAI | GCGC | 1 cut(s) | 1038 |
| Ksp22I | TGATCA | 1 cut(s) | 100 |
| KspI | CCGCGG | 1 cut(s) | 514 |
| Kzo9I | GATC | 6 cut(s) | 100, 186, 252, 568, 1320, 1391 |
| LguI | GCTCTTC | 2 cut(s) | 709, 918 |
| LmnI | GCTCC | 2 cut(s) | 212, 460 |
| Lsp1109I | GCAGC | 2 cut(s) | 685, 1303 |
| LweI | GCATC | 1 cut(s) | 1278 |
| MaeI | CTAG | 6 cut(s) | 174, 233, 438, 560, 881, 1043 |
| MaeIII | GTNAC | 6 cut(s) | 6, 77, 130, 337, 1274, 1355 |
| MalI | GATC | 6 cut(s) | 102, 188, 254, 570, 1322, 1393 |
| MboI | GATC | 6 cut(s) | 100, 186, 252, 568, 1320, 1391 |
| MflI | RGATCY | 1 cut(s) | 1391 |
| MhlI | GDGCHC | 2 cut(s) | 400, 423 |
| MlsI | TGGCCA | 1 cut(s) | 276 |
| MluCI | AATT | 8 cut(s) | 57, 163, 492, 722, 735, 795, 960, 1015 |
| MluNI | TGGCCA | 1 cut(s) | 276 |
| MlyI | GAGTC | 1 cut(s) | 549 |
| MmeI | TCCRAC | 2 cut(s) | 925, 1231 |
| Mox20I | TGGCCA | 1 cut(s) | 276 |
| MroXI | GAANNNNTTC | 1 cut(s) | 856 |
| MscI | TGGCCA | 1 cut(s) | 276 |
| MseI | TTAA | 5 cut(s) | 60, 404, 645, 950, 1176 |
| MslI | CAYNNNNRTG | 4 cut(s) | 551, 1007, 1189, 1315 |
| Msp20I | TGGCCA | 1 cut(s) | 276 |
| MspA1I | CMGCKG | 1 cut(s) | 513 |
| MspI | CCGG | 2 cut(s) | 179, 572 |
| MspR9I | CCNGG | 1 cut(s) | 180 |
| Mva1269I | GAATGC | 3 cut(s) | 310, 700, 1263 |
| MvnI | CGCG | 1 cut(s) | 513 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 212, 522, 592 |
| NciI | CCSGG | 1 cut(s) | 180 |
| NcoI | CCATGG | 1 cut(s) | 412 |
| NdeII | GATC | 6 cut(s) | 100, 186, 252, 568, 1320, 1391 |
| NlaIII | CATG | 6 cut(s) | 34, 416, 479, 569, 1063, 1159 |
| NlaIV | GGNNCC | 2 cut(s) | 410, 1093 |
| NmuCI | GTSAC | 3 cut(s) | 130, 337, 1274 |
| NspI | RCATGY | 1 cut(s) | 479 |
| OliI | CACNNNNGTG | 2 cut(s) | 1189, 1315 |
| PciI | ACATGT | 1 cut(s) | 475 |
| PciSI | GCTCTTC | 2 cut(s) | 709, 918 |
| PctI | GAATGC | 3 cut(s) | 310, 700, 1263 |
| PdmI | GAANNNNTTC | 1 cut(s) | 856 |
| PfeI | GAWTC | 5 cut(s) | 503, 611, 852, 1378, 1401 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1146 |
| PkrI | GCNGC | 3 cut(s) | 515, 700, 1293 |
| PleI | GAGTC | 1 cut(s) | 548 |
| PpsI | GAGTC | 1 cut(s) | 548 |
| PscI | ACATGT | 1 cut(s) | 475 |
| PspEI | GGTNACC | 1 cut(s) | 130 |
| PspFI | CCCAGC | 2 cut(s) | 676, 1139 |
| PspN4I | GGNNCC | 2 cut(s) | 410, 1093 |
| PspPI | GGNCC | 1 cut(s) | 556 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1146 |
| PsuI | RGATCY | 1 cut(s) | 1391 |
| RsaI | GTAC | 6 cut(s) | 268, 392, 564, 682, 1181, 1388 |
| RsaNI | GTAC | 6 cut(s) | 267, 391, 563, 681, 1180, 1387 |
| RseI | CAYNNNNRTG | 4 cut(s) | 551, 1007, 1189, 1315 |
| SacII | CCGCGG | 1 cut(s) | 514 |
| SapI | GCTCTTC | 2 cut(s) | 709, 918 |
| SaqAI | TTAA | 5 cut(s) | 60, 404, 645, 950, 1176 |
| SatI | GCNGC | 3 cut(s) | 514, 699, 1292 |
| Sau3AI | GATC | 6 cut(s) | 100, 186, 252, 568, 1320, 1391 |
| Sau96I | GGNCC | 1 cut(s) | 556 |
| ScaI | AGTACT | 1 cut(s) | 268 |
| SchI | GAGTC | 1 cut(s) | 549 |
| ScrFI | CCNGG | 1 cut(s) | 180 |
| SduI | GDGCHC | 2 cut(s) | 400, 423 |
| SfaNI | GCATC | 1 cut(s) | 1278 |
| Sfr303I | CCGCGG | 1 cut(s) | 514 |
| SgrBI | CCGCGG | 1 cut(s) | 514 |
| SinI | GGWCC | 1 cut(s) | 556 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 551, 1007, 1189, 1315 |
| SmlI | CTYRAG | 4 cut(s) | 342, 835, 1165, 1187 |
| SmoI | CTYRAG | 4 cut(s) | 342, 835, 1165, 1187 |
| Sse9I | AATT | 8 cut(s) | 57, 163, 492, 722, 735, 795, 960, 1015 |
| SsiI | CCGC | 5 cut(s) | 200, 210, 511, 513, 525 |
| SspI | AATATT | 1 cut(s) | 819 |
| SspMI | CTAG | 6 cut(s) | 174, 233, 438, 560, 881, 1043 |
| StyD4I | CCNGG | 1 cut(s) | 178 |
| StyI | CCWWGG | 1 cut(s) | 412 |
| TaaI | ACNGT | 3 cut(s) | 97, 373, 395 |
| TasI | AATT | 8 cut(s) | 57, 163, 492, 722, 735, 795, 960, 1015 |
| TatI | WGTACW | 3 cut(s) | 266, 390, 562 |
| TauI | GCSGC | 1 cut(s) | 516 |
| TfiI | GAWTC | 5 cut(s) | 503, 611, 852, 1378, 1401 |
| Tru1I | TTAA | 5 cut(s) | 60, 404, 645, 950, 1176 |
| Tru9I | TTAA | 5 cut(s) | 60, 404, 645, 950, 1176 |
| TscAI | CASTG | 2 cut(s) | 400, 990 |
| TseFI | GTSAC | 3 cut(s) | 130, 337, 1274 |
| TseI | GCWGC | 2 cut(s) | 698, 1291 |
| Tsp45I | GTSAC | 3 cut(s) | 130, 337, 1274 |
| TspDTI | ATGAA | 6 cut(s) | 317, 707, 1045, 1108, 1144, 1336 |
| TspRI | CASTG | 2 cut(s) | 400, 990 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1146 |
| VneI | GTGCAC | 1 cut(s) | 419 |
| VpaK11BI | GGWCC | 1 cut(s) | 556 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 600 |
| XapI | RAATTY | 1 cut(s) | 1015 |
| XceI | RCATGY | 1 cut(s) | 479 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1314 |
| XmiI | GTMKAC | 1 cut(s) | 933 |
| XmnI | GAANNNNTTC | 1 cut(s) | 856 |
| XspI | CTAG | 6 cut(s) | 174, 233, 438, 560, 881, 1043 |
| ZrmI | AGTACT | 1 cut(s) | 268 |